View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7708_low_28 (Length: 306)

Name: NF7708_low_28
Description: NF7708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7708_low_28
NF7708_low_28
[»] chr8 (80 HSPs)
chr8 (107-306)||(471088-471284)
chr8 (115-305)||(5333405-5333595)
chr8 (125-306)||(29617196-29617377)
chr8 (107-306)||(8443433-8443632)
chr8 (115-306)||(39657426-39657621)
chr8 (125-306)||(15344295-15344475)
chr8 (125-306)||(15433360-15433540)
chr8 (125-306)||(15524664-15524844)
chr8 (115-306)||(18890621-18890816)
chr8 (107-306)||(1239319-1239517)
chr8 (107-302)||(1236623-1236817)
chr8 (152-306)||(14916110-14916263)
chr8 (181-306)||(42046263-42046388)
chr8 (127-306)||(8826200-8826378)
chr8 (107-301)||(34609801-34609998)
chr8 (180-306)||(14585718-14585844)
chr8 (172-306)||(41896550-41896684)
chr8 (107-306)||(23230614-23230810)
chr8 (115-306)||(24099172-24099368)
chr8 (149-295)||(21237800-21237946)
chr8 (125-286)||(3240366-3240527)
chr8 (108-303)||(16247148-16247340)
chr8 (107-306)||(20553163-20553359)
chr8 (153-306)||(33347443-33347595)
chr8 (154-305)||(7677206-7677357)
chr8 (107-306)||(3673412-3673608)
chr8 (165-306)||(26469068-26469209)
chr8 (108-305)||(40618996-40619190)
chr8 (180-306)||(43833918-43834043)
chr8 (132-268)||(8981155-8981292)
chr8 (107-306)||(14544825-14545021)
chr8 (153-306)||(17693536-17693689)
chr8 (153-306)||(27110387-27110540)
chr8 (222-306)||(8867888-8867972)
chr8 (217-303)||(7198120-7198206)
chr8 (114-306)||(7883163-7883352)
chr8 (154-304)||(20559668-20559818)
chr8 (154-304)||(20571230-20571380)
chr8 (192-306)||(45445733-45445847)
chr8 (153-306)||(28897723-28897876)
chr8 (152-305)||(40211225-40211378)
chr8 (114-306)||(10377667-10377856)
chr8 (125-306)||(25190987-25191167)
chr8 (153-302)||(33214597-33214746)
chr8 (212-292)||(10331164-10331244)
chr8 (166-257)||(19444035-19444126)
chr8 (110-204)||(26469232-26469326)
chr8 (127-203)||(35580470-35580546)
chr8 (223-302)||(24186587-24186666)
chr8 (187-306)||(37971331-37971450)
chr8 (192-306)||(16928679-16928793)
chr8 (153-306)||(31013530-31013683)
chr8 (222-274)||(27747051-27747103)
chr8 (222-306)||(30568243-30568327)
chr8 (192-306)||(24419087-24419202)
chr8 (188-306)||(28086734-28086853)
chr8 (248-306)||(18846388-18846446)
chr8 (115-201)||(34493041-34493127)
chr8 (256-306)||(41684499-41684549)
chr8 (127-204)||(44099928-44100005)
chr8 (127-203)||(4808977-4809053)
chr8 (154-302)||(9637335-9637483)
chr8 (125-297)||(31634213-31634384)
chr8 (127-198)||(11196902-11196973)
chr8 (115-202)||(24419202-24419289)
chr8 (125-302)||(27498292-27498464)
chr8 (125-204)||(27747107-27747186)
chr8 (180-306)||(5046794-5046920)
chr8 (222-268)||(28239927-28239973)
chr8 (125-206)||(17427208-17427289)
chr8 (125-178)||(24853458-24853511)
chr8 (158-195)||(37663064-37663101)
chr8 (127-203)||(9619352-9619428)
chr8 (127-203)||(11464184-11464260)
chr8 (222-306)||(12184372-12184456)
chr8 (222-306)||(12428800-12428884)
chr8 (222-274)||(17427154-17427206)
chr8 (222-306)||(29939383-29939467)
chr8 (150-238)||(39450552-39450640)
chr8 (127-203)||(43192341-43192417)
[»] chr4 (91 HSPs)
chr4 (115-306)||(52944305-52944496)
chr4 (116-305)||(33332494-33332685)
chr4 (115-306)||(51888135-51888326)
chr4 (129-306)||(9048672-9048849)
chr4 (114-306)||(10496331-10496520)
chr4 (108-306)||(28857389-28857586)
chr4 (107-295)||(9643374-9643562)
chr4 (125-306)||(22038726-22038907)
chr4 (115-306)||(36194699-36194893)
chr4 (150-306)||(21662466-21662622)
chr4 (150-306)||(21671230-21671386)
chr4 (130-305)||(2069505-2069680)
chr4 (172-306)||(18935833-18935967)
chr4 (115-306)||(31891211-31891406)
chr4 (129-306)||(36161719-36161896)
chr4 (107-306)||(36204303-36204508)
chr4 (125-306)||(55227982-55228163)
chr4 (107-305)||(17949249-17949444)
chr4 (107-305)||(17953101-17953296)
chr4 (125-306)||(27651944-27652128)
chr4 (175-306)||(1621433-1621559)
chr4 (107-306)||(21686166-21686361)
chr4 (107-306)||(22611172-22611368)
chr4 (154-306)||(12199617-12199769)
chr4 (125-229)||(18048887-18048991)
chr4 (116-298)||(22300844-22301026)
chr4 (212-306)||(47320336-47320430)
chr4 (125-305)||(31359671-31359852)
chr4 (153-306)||(52060847-52061000)
chr4 (153-306)||(54021892-54022045)
chr4 (115-306)||(6155147-6155340)
chr4 (125-304)||(43853446-43853626)
chr4 (125-306)||(9713916-9714095)
chr4 (107-306)||(33921040-33921239)
chr4 (151-305)||(48351111-48351265)
chr4 (114-306)||(56040570-56040759)
chr4 (107-306)||(13634104-13634300)
chr4 (115-291)||(35395619-35395785)
chr4 (107-306)||(4142676-4142875)
chr4 (192-306)||(2520850-2520964)
chr4 (152-306)||(10258820-10258974)
chr4 (107-302)||(19853440-19853632)
chr4 (107-306)||(32766503-32766699)
chr4 (107-306)||(35348296-35348492)
chr4 (107-306)||(53444107-53444303)
chr4 (114-303)||(8670481-8670667)
chr4 (107-267)||(56156605-56156762)
chr4 (107-306)||(24098991-24099187)
chr4 (148-305)||(37465510-37465666)
chr4 (192-305)||(38166155-38166267)
chr4 (222-302)||(36700377-36700457)
chr4 (187-306)||(53811094-53811213)
chr4 (149-246)||(4937861-4937958)
chr4 (115-306)||(52933873-52934059)
chr4 (206-298)||(9145823-9145914)
chr4 (222-306)||(45418613-45418697)
chr4 (182-305)||(47158286-47158409)
chr4 (128-186)||(52204375-52204433)
chr4 (119-306)||(37030262-37030446)
chr4 (222-306)||(21554714-21554798)
chr4 (182-306)||(29960873-29960997)
chr4 (115-202)||(37683884-37683972)
chr4 (212-306)||(42032453-42032546)
chr4 (127-204)||(868180-868257)
chr4 (114-265)||(9178349-9178497)
chr4 (127-199)||(10389753-10389825)
chr4 (174-303)||(26090837-26090970)
chr4 (234-306)||(29120303-29120375)
chr4 (127-203)||(34024433-34024508)
chr4 (127-203)||(43154009-43154085)
chr4 (230-306)||(43510305-43510381)
chr4 (125-202)||(3336152-3336230)
chr4 (153-203)||(5119371-5119421)
chr4 (222-268)||(12265553-12265599)
chr4 (125-203)||(18138908-18138986)
chr4 (150-204)||(28834241-28834295)
chr4 (125-203)||(49126121-49126199)
chr4 (125-202)||(2624512-2624589)
chr4 (269-306)||(22305545-22305582)
chr4 (150-255)||(22806571-22806676)
chr4 (127-172)||(43353584-43353629)
chr4 (241-306)||(44596780-44596845)
chr4 (127-204)||(53616644-53616721)
chr4 (127-203)||(4643876-4643952)
chr4 (127-203)||(9283929-9284005)
chr4 (222-297)||(10389668-10389744)
chr4 (127-203)||(25273901-25273977)
chr4 (222-297)||(34024352-34024428)
chr4 (226-306)||(43095733-43095813)
chr4 (127-203)||(43444411-43444487)
chr4 (127-203)||(47417680-47417756)
[»] chr2 (89 HSPs)
chr2 (115-302)||(10929648-10929836)
chr2 (107-306)||(32448541-32448742)
chr2 (172-306)||(14955570-14955704)
chr2 (150-306)||(23933544-23933700)
chr2 (107-306)||(29574553-29574752)
chr2 (180-306)||(10237141-10237267)
chr2 (107-306)||(4904070-4904266)
chr2 (125-306)||(17249072-17249252)
chr2 (107-306)||(24461416-24461618)
chr2 (153-306)||(25508993-25509146)
chr2 (159-306)||(19595828-19595975)
chr2 (172-306)||(3308986-3309120)
chr2 (125-306)||(28533879-28534060)
chr2 (107-306)||(37416686-37416885)
chr2 (153-306)||(17151445-17151599)
chr2 (128-306)||(4264472-4264647)
chr2 (107-303)||(5427797-5427989)
chr2 (152-306)||(16375960-16376114)
chr2 (154-306)||(30399954-30400112)
chr2 (127-302)||(34128613-34128788)
chr2 (192-306)||(1421737-1421851)
chr2 (130-306)||(6436609-6436782)
chr2 (107-306)||(37876531-37876727)
chr2 (108-306)||(18763448-18763643)
chr2 (115-306)||(37994263-37994459)
chr2 (117-306)||(31128705-31128891)
chr2 (180-289)||(12647051-12647160)
chr2 (107-306)||(31210532-31210728)
chr2 (165-306)||(33760118-33760259)
chr2 (107-306)||(36943046-36943242)
chr2 (154-306)||(19028839-19028991)
chr2 (153-256)||(28871763-28871866)
chr2 (184-302)||(41694674-41694792)
chr2 (153-306)||(1415579-1415732)
chr2 (125-251)||(6358851-6358979)
chr2 (107-302)||(7677802-7677994)
chr2 (171-300)||(14423365-14423494)
chr2 (107-232)||(19597855-19597980)
chr2 (156-301)||(29173650-29173794)
chr2 (107-306)||(38445145-38445341)
chr2 (222-306)||(4778844-4778928)
chr2 (158-238)||(12554174-12554254)
chr2 (222-306)||(29279495-29279579)
chr2 (222-301)||(12677380-12677459)
chr2 (153-306)||(18107675-18107825)
chr2 (192-303)||(33923766-33923877)
chr2 (147-232)||(11812699-11812784)
chr2 (107-305)||(43397044-43397240)
chr2 (222-306)||(17994655-17994739)
chr2 (165-305)||(33585661-33585801)
chr2 (125-203)||(459269-459347)
chr2 (155-300)||(8809304-8809449)
chr2 (107-306)||(9169183-9169379)
chr2 (165-250)||(36175477-36175562)
chr2 (125-202)||(37614121-37614198)
chr2 (108-184)||(12647967-12648043)
chr2 (222-302)||(19062281-19062361)
chr2 (127-202)||(9418426-9418501)
chr2 (224-306)||(4041519-4041601)
chr2 (107-306)||(7646452-7646653)
chr2 (114-305)||(7448233-7448421)
chr2 (253-306)||(21612360-21612413)
chr2 (107-306)||(27097332-27097527)
chr2 (107-306)||(36691853-36692049)
chr2 (127-203)||(9986337-9986413)
chr2 (222-306)||(31788547-31788631)
chr2 (153-273)||(35220347-35220467)
chr2 (127-202)||(30420688-30420763)
chr2 (126-301)||(32092247-32092422)
chr2 (223-298)||(38293641-38293716)
chr2 (233-274)||(17319423-17319464)
chr2 (125-202)||(28227709-28227786)
chr2 (125-222)||(37628697-37628793)
chr2 (151-272)||(41327523-41327644)
chr2 (222-297)||(2808386-2808462)
chr2 (127-203)||(3269106-3269182)
chr2 (127-203)||(3269665-3269741)
chr2 (127-203)||(3270224-3270300)
chr2 (222-258)||(3725271-3725307)
chr2 (127-203)||(6173642-6173718)
chr2 (222-297)||(6173723-6173799)
chr2 (127-199)||(7015710-7015782)
chr2 (127-203)||(8805876-8805952)
chr2 (117-161)||(14416157-14416201)
chr2 (127-203)||(20047077-20047153)
chr2 (127-203)||(26025405-26025481)
chr2 (127-203)||(27249146-27249222)
chr2 (127-159)||(38293559-38293591)
chr2 (222-306)||(39310778-39310861)
[»] chr1 (77 HSPs)
chr1 (115-306)||(47132880-47133071)
chr1 (149-301)||(16262872-16263024)
chr1 (115-306)||(48750158-48750353)
chr1 (125-306)||(24582938-24583118)
chr1 (125-306)||(49626901-49627081)
chr1 (107-306)||(44543242-44543440)
chr1 (107-306)||(14872612-14872807)
chr1 (107-306)||(19060879-19061077)
chr1 (117-306)||(41994406-41994595)
chr1 (175-306)||(37720073-37720204)
chr1 (107-306)||(5983808-5984004)
chr1 (108-306)||(7337587-7337782)
chr1 (180-306)||(36775634-36775760)
chr1 (107-306)||(21947542-21947738)
chr1 (125-306)||(34413016-34413199)
chr1 (154-306)||(44915655-44915807)
chr1 (116-298)||(12635148-12635330)
chr1 (115-306)||(16161811-16161996)
chr1 (206-304)||(24597250-24597348)
chr1 (107-306)||(45415530-45415726)
chr1 (107-305)||(35484316-35484511)
chr1 (123-303)||(43412359-43412539)
chr1 (127-306)||(9341716-9341894)
chr1 (155-306)||(45789558-45789709)
chr1 (107-267)||(1742253-1742410)
chr1 (169-303)||(18939351-18939484)
chr1 (117-301)||(27580057-27580238)
chr1 (132-306)||(6217747-6217925)
chr1 (166-306)||(3228297-3228437)
chr1 (108-306)||(7836720-7836915)
chr1 (206-306)||(25564066-25564166)
chr1 (114-306)||(34878202-34878391)
chr1 (155-257)||(49648847-49648949)
chr1 (107-306)||(10776385-10776581)
chr1 (108-237)||(34528700-34528829)
chr1 (223-306)||(31317821-31317904)
chr1 (153-303)||(23291569-23291719)
chr1 (224-302)||(31984247-31984325)
chr1 (224-305)||(15492373-15492454)
chr1 (107-267)||(21686845-21687002)
chr1 (212-306)||(32679065-32679159)
chr1 (125-203)||(39927549-39927627)
chr1 (128-305)||(31692392-31692568)
chr1 (154-297)||(51916599-51916737)
chr1 (222-306)||(8211835-8211918)
chr1 (222-305)||(13075580-13075663)
chr1 (226-292)||(26535437-26535503)
chr1 (180-306)||(32873788-32873914)
chr1 (192-306)||(50616599-50616713)
chr1 (192-306)||(50624426-50624540)
chr1 (234-306)||(4413210-4413282)
chr1 (222-306)||(15431590-15431674)
chr1 (222-297)||(50166013-50166089)
chr1 (127-203)||(51871873-51871949)
chr1 (267-306)||(14489401-14489440)
chr1 (187-302)||(32395047-32395162)
chr1 (132-274)||(1602084-1602225)
chr1 (125-235)||(30506167-30506276)
chr1 (153-267)||(31919003-31919117)
chr1 (192-298)||(39888236-39888342)
chr1 (125-203)||(48365760-48365838)
chr1 (222-297)||(14545608-14545684)
chr1 (127-203)||(35584613-35584689)
chr1 (222-274)||(39987480-39987532)
chr1 (153-244)||(27456555-27456646)
chr1 (127-178)||(27872748-27872799)
chr1 (125-204)||(44637429-44637508)
chr1 (129-203)||(39987401-39987475)
chr1 (150-203)||(799813-799866)
chr1 (150-203)||(7312100-7312153)
chr1 (125-218)||(40163509-40163602)
chr1 (222-306)||(13144736-13144820)
chr1 (222-306)||(16989455-16989539)
chr1 (270-306)||(24583278-24583314)
chr1 (127-203)||(30879086-30879161)
chr1 (241-301)||(35461978-35462038)
chr1 (127-203)||(51868640-51868716)
[»] chr7 (65 HSPs)
chr7 (115-306)||(24069318-24069509)
chr7 (115-306)||(28476199-28476393)
chr7 (115-296)||(38880512-38880693)
chr7 (125-302)||(41553362-41553539)
chr7 (180-304)||(22742985-22743109)
chr7 (115-302)||(24350767-24350956)
chr7 (114-306)||(37837382-37837571)
chr7 (175-302)||(35132983-35133110)
chr7 (125-299)||(3224342-3224515)
chr7 (125-302)||(35665063-35665241)
chr7 (107-306)||(24770217-24770413)
chr7 (107-306)||(42978581-42978777)
chr7 (125-260)||(41553749-41553884)
chr7 (107-306)||(9450061-9450257)
chr7 (107-302)||(9977138-9977326)
chr7 (115-267)||(3394450-3394604)
chr7 (107-306)||(45349723-45349919)
chr7 (107-306)||(48061393-48061589)
chr7 (107-306)||(48316736-48316932)
chr7 (107-305)||(12141233-12141428)
chr7 (125-260)||(41554094-41554229)
chr7 (107-306)||(13796853-13797052)
chr7 (107-306)||(19404681-19404877)
chr7 (107-306)||(38798752-38798948)
chr7 (152-306)||(5348516-5348670)
chr7 (114-306)||(47590289-47590478)
chr7 (107-306)||(19296841-19297037)
chr7 (165-302)||(28044684-28044821)
chr7 (193-306)||(39171514-39171627)
chr7 (187-293)||(1769115-1769221)
chr7 (107-302)||(8001474-8001666)
chr7 (165-302)||(46700061-46700198)
chr7 (227-304)||(48930795-48930872)
chr7 (120-208)||(969469-969557)
chr7 (107-305)||(34899532-34899727)
chr7 (114-306)||(25287110-25287299)
chr7 (149-306)||(29617623-29617781)
chr7 (107-267)||(39328753-39328910)
chr7 (165-306)||(11343836-11343976)
chr7 (153-306)||(25255241-25255394)
chr7 (115-210)||(26623810-26623902)
chr7 (107-302)||(30756747-30756939)
chr7 (152-252)||(22087330-22087430)
chr7 (183-302)||(4999957-5000076)
chr7 (223-302)||(5078342-5078421)
chr7 (222-297)||(13592423-13592498)
chr7 (255-302)||(25068178-25068225)
chr7 (115-256)||(27997067-27997205)
chr7 (125-306)||(39229004-39229181)
chr7 (153-299)||(4530090-4530236)
chr7 (153-302)||(5792810-5792959)
chr7 (115-237)||(1749140-1749266)
chr7 (165-252)||(24610148-24610235)
chr7 (125-202)||(17611129-17611206)
chr7 (115-235)||(5775182-5775301)
chr7 (127-203)||(20116588-20116664)
chr7 (127-203)||(35667227-35667303)
chr7 (115-202)||(25068061-25068147)
chr7 (125-204)||(32521921-32522000)
chr7 (222-264)||(42067010-42067052)
chr7 (127-203)||(1448825-1448901)
chr7 (127-203)||(23786581-23786657)
chr7 (127-203)||(34773717-34773793)
chr7 (222-297)||(45198947-45199023)
chr7 (127-203)||(46339060-46339136)
[»] scaffold0347 (1 HSPs)
scaffold0347 (125-306)||(6014-6195)
[»] chr5 (48 HSPs)
chr5 (129-306)||(35920920-35921097)
chr5 (125-306)||(14211206-14211391)
chr5 (115-306)||(28540830-28541025)
chr5 (172-306)||(2979230-2979364)
chr5 (108-306)||(8088136-8088333)
chr5 (153-306)||(10722772-10722925)
chr5 (107-306)||(13007197-13007393)
chr5 (107-306)||(14726385-14726581)
chr5 (153-306)||(26878032-26878185)
chr5 (107-306)||(38597765-38597961)
chr5 (193-306)||(39567321-39567434)
chr5 (114-306)||(24229708-24229897)
chr5 (125-306)||(10332471-10332653)
chr5 (172-302)||(19103395-19103525)
chr5 (165-306)||(41630525-41630666)
chr5 (154-305)||(16758552-16758703)
chr5 (192-306)||(6216948-6217062)
chr5 (107-306)||(25980126-25980321)
chr5 (114-306)||(19120885-19121076)
chr5 (107-239)||(38110939-38111071)
chr5 (114-306)||(7930152-7930341)
chr5 (107-303)||(35850767-35850960)
chr5 (153-306)||(38007369-38007522)
chr5 (108-306)||(6012062-6012257)
chr5 (226-306)||(7036303-7036383)
chr5 (154-302)||(34945405-34945553)
chr5 (107-306)||(9113649-9113845)
chr5 (233-306)||(14082320-14082393)
chr5 (107-306)||(31391677-31391873)
chr5 (187-306)||(13421978-13422097)
chr5 (132-266)||(8984919-8985049)
chr5 (107-306)||(11976859-11977055)
chr5 (222-302)||(15571566-15571646)
chr5 (115-238)||(37986105-37986225)
chr5 (222-274)||(20257633-20257685)
chr5 (180-303)||(1409536-1409659)
chr5 (125-203)||(7613053-7613131)
chr5 (114-273)||(11073857-11074013)
chr5 (127-203)||(18677460-18677536)
chr5 (222-273)||(11192459-11192510)
chr5 (127-202)||(36344487-36344562)
chr5 (127-169)||(42579896-42579938)
chr5 (129-194)||(13468612-13468677)
chr5 (114-203)||(16981285-16981374)
chr5 (125-202)||(19349680-19349757)
chr5 (127-204)||(34881726-34881803)
chr5 (127-203)||(26578260-26578336)
chr5 (127-203)||(41184435-41184511)
[»] chr6 (50 HSPs)
chr6 (115-306)||(30493507-30493698)
chr6 (120-300)||(1933622-1933802)
chr6 (107-306)||(528274-528473)
chr6 (115-306)||(546001-546197)
chr6 (125-306)||(8102707-8102892)
chr6 (125-306)||(14801808-14801993)
chr6 (115-302)||(26588400-26588587)
chr6 (115-306)||(34185617-34185808)
chr6 (108-306)||(23128589-23128784)
chr6 (125-306)||(29255370-29255547)
chr6 (115-306)||(31296795-31296986)
chr6 (172-306)||(1523440-1523574)
chr6 (107-306)||(127640-127835)
chr6 (148-305)||(9380031-9380188)
chr6 (119-298)||(28981156-28981335)
chr6 (107-306)||(3913498-3913694)
chr6 (107-306)||(32191654-32191851)
chr6 (126-301)||(679095-679270)
chr6 (187-306)||(30776710-30776829)
chr6 (192-302)||(31852121-31852231)
chr6 (125-296)||(7976121-7976282)
chr6 (108-303)||(3355088-3355280)
chr6 (107-306)||(34018530-34018726)
chr6 (107-306)||(7515126-7515322)
chr6 (153-306)||(12170481-12170634)
chr6 (153-306)||(30894613-30894765)
chr6 (107-306)||(33053092-33053288)
chr6 (182-300)||(27097572-27097690)
chr6 (107-306)||(606174-606370)
chr6 (154-302)||(4010440-4010587)
chr6 (219-302)||(29743076-29743159)
chr6 (114-306)||(32327141-32327330)
chr6 (107-302)||(29319806-29319998)
chr6 (125-306)||(30608439-30608616)
chr6 (154-303)||(34222812-34222958)
chr6 (222-304)||(8266717-8266799)
chr6 (192-306)||(20225903-20226017)
chr6 (192-306)||(22119887-22120001)
chr6 (125-178)||(33543640-33543693)
chr6 (126-236)||(17346522-17346632)
chr6 (116-186)||(19164687-19164757)
chr6 (125-199)||(22571459-22571533)
chr6 (125-203)||(25337574-25337652)
chr6 (193-306)||(6957203-6957316)
chr6 (222-261)||(8196358-8196397)
chr6 (222-302)||(67929-68009)
chr6 (127-203)||(23947313-23947389)
chr6 (226-258)||(32174625-32174657)
chr6 (222-274)||(33543560-33543612)
chr6 (125-161)||(34489254-34489290)
[»] chr3 (92 HSPs)
chr3 (149-306)||(628847-629003)
chr3 (125-306)||(35175387-35175568)
chr3 (107-306)||(53807782-53807980)
chr3 (125-306)||(8914691-8914876)
chr3 (115-301)||(14859466-14859649)
chr3 (150-305)||(26716032-26716187)
chr3 (125-306)||(51923706-51923891)
chr3 (108-306)||(4821774-4821970)
chr3 (172-306)||(51303567-51303701)
chr3 (115-306)||(7546583-7546779)
chr3 (115-306)||(29922030-29922221)
chr3 (115-306)||(29971183-29971374)
chr3 (115-306)||(21289738-21289933)
chr3 (115-273)||(29239316-29239474)
chr3 (115-306)||(16235395-16235590)
chr3 (114-306)||(33579855-33580044)
chr3 (172-306)||(50194259-50194393)
chr3 (117-306)||(53508200-53508390)
chr3 (115-238)||(12947266-12947389)
chr3 (122-305)||(26739282-26739465)
chr3 (125-229)||(4396335-4396439)
chr3 (125-306)||(27706150-27706335)
chr3 (172-306)||(42460780-42460913)
chr3 (107-306)||(36461355-36461551)
chr3 (107-302)||(43488518-43488710)
chr3 (165-306)||(44805053-44805193)
chr3 (153-306)||(48199788-48199941)
chr3 (116-306)||(21533733-21533920)
chr3 (107-306)||(40487293-40487489)
chr3 (194-306)||(52115945-52116057)
chr3 (153-306)||(9797458-9797611)
chr3 (107-306)||(45568369-45568565)
chr3 (107-301)||(43016823-43017014)
chr3 (115-298)||(25460931-25461116)
chr3 (107-306)||(52923041-52923237)
chr3 (153-306)||(45424809-45424962)
chr3 (153-273)||(32701502-32701622)
chr3 (125-306)||(41818195-41818379)
chr3 (223-306)||(4169875-4169957)
chr3 (180-306)||(19339214-19339339)
chr3 (107-267)||(35864895-35865052)
chr3 (107-306)||(9998435-9998631)
chr3 (229-306)||(54149078-54149155)
chr3 (222-306)||(23799834-23799918)
chr3 (222-306)||(40556782-40556866)
chr3 (166-306)||(46304444-46304584)
chr3 (227-306)||(3085225-3085304)
chr3 (127-238)||(32246432-32246543)
chr3 (108-304)||(20464896-20465089)
chr3 (107-299)||(20608830-20609019)
chr3 (192-306)||(21431663-21431777)
chr3 (192-306)||(47041972-47042086)
chr3 (107-306)||(6954620-6954816)
chr3 (125-198)||(22290925-22290998)
chr3 (107-306)||(38545767-38545963)
chr3 (223-306)||(19619795-19619877)
chr3 (223-306)||(53099871-53099954)
chr3 (192-306)||(9173798-9173912)
chr3 (153-299)||(12149715-12149861)
chr3 (165-306)||(27856187-27856329)
chr3 (125-203)||(31794072-31794150)
chr3 (183-305)||(44647602-44647724)
chr3 (243-306)||(4711583-4711646)
chr3 (222-305)||(12050573-12050656)
chr3 (147-218)||(52496932-52497003)
chr3 (125-203)||(36734687-36734765)
chr3 (153-303)||(45425603-45425753)
chr3 (264-306)||(51487217-51487259)
chr3 (261-306)||(7792111-7792156)
chr3 (172-249)||(7887424-7887501)
chr3 (107-306)||(10233038-10233234)
chr3 (269-306)||(38142652-38142689)
chr3 (107-306)||(47896120-47896316)
chr3 (107-306)||(48650658-48650854)
chr3 (115-203)||(3606749-3606837)
chr3 (222-306)||(7448838-7448922)
chr3 (222-306)||(7456980-7457064)
chr3 (222-306)||(21313116-21313200)
chr3 (222-266)||(27066034-27066078)
chr3 (270-306)||(32246551-32246587)
chr3 (127-203)||(42719520-42719596)
chr3 (222-274)||(46178653-46178705)
chr3 (222-261)||(25631477-25631516)
chr3 (127-202)||(32607472-32607547)
chr3 (222-306)||(38860036-38860122)
chr3 (247-306)||(46220768-46220827)
chr3 (222-268)||(22803106-22803152)
chr3 (253-306)||(12946891-12946944)
chr3 (222-271)||(31271768-31271817)
chr3 (174-306)||(18011052-18011184)
chr3 (127-203)||(35499193-35499269)
chr3 (127-203)||(46934645-46934721)
[»] scaffold0009 (1 HSPs)
scaffold0009 (149-306)||(58012-58169)
[»] scaffold0042 (1 HSPs)
scaffold0042 (137-306)||(92420-92589)
[»] scaffold0039 (1 HSPs)
scaffold0039 (115-306)||(93080-93272)
[»] scaffold0888 (1 HSPs)
scaffold0888 (180-306)||(1602-1728)
[»] scaffold0049 (1 HSPs)
scaffold0049 (155-306)||(71224-71375)
[»] scaffold0445 (1 HSPs)
scaffold0445 (108-306)||(1314-1509)
[»] scaffold0017 (1 HSPs)
scaffold0017 (107-306)||(32671-32867)
[»] scaffold0127 (1 HSPs)
scaffold0127 (114-306)||(15467-15657)
[»] scaffold0262 (1 HSPs)
scaffold0262 (222-306)||(1743-1827)
[»] scaffold0121 (1 HSPs)
scaffold0121 (187-302)||(31202-31317)
[»] scaffold0021 (1 HSPs)
scaffold0021 (115-306)||(4141-4337)
[»] scaffold0128 (1 HSPs)
scaffold0128 (222-306)||(36906-36990)
[»] scaffold0136 (2 HSPs)
scaffold0136 (164-306)||(38076-38221)
scaffold0136 (107-306)||(9966-10162)
[»] scaffold0015 (2 HSPs)
scaffold0015 (212-306)||(3965-4058)
scaffold0015 (148-210)||(4072-4134)
[»] scaffold0050 (1 HSPs)
scaffold0050 (107-306)||(65966-66162)
[»] scaffold0884 (1 HSPs)
scaffold0884 (108-306)||(1897-2092)
[»] scaffold0088 (1 HSPs)
scaffold0088 (222-306)||(50857-50941)
[»] scaffold0634 (1 HSPs)
scaffold0634 (153-299)||(8524-8670)
[»] scaffold0603 (1 HSPs)
scaffold0603 (115-306)||(7693-7880)
[»] scaffold0026 (1 HSPs)
scaffold0026 (107-270)||(71824-71984)
[»] scaffold0002 (1 HSPs)
scaffold0002 (125-203)||(453936-454014)
[»] scaffold0154 (1 HSPs)
scaffold0154 (226-306)||(25375-25455)
[»] scaffold0064 (1 HSPs)
scaffold0064 (182-238)||(19066-19122)
[»] scaffold0219 (1 HSPs)
scaffold0219 (222-305)||(14796-14878)
[»] scaffold0113 (1 HSPs)
scaffold0113 (125-202)||(36683-36760)
[»] scaffold0014 (1 HSPs)
scaffold0014 (222-259)||(201326-201363)
[»] scaffold0311 (1 HSPs)
scaffold0311 (222-297)||(8778-8854)
[»] scaffold0095 (1 HSPs)
scaffold0095 (150-238)||(9396-9484)


Alignment Details
Target: chr8 (Bit Score: 178; Significance: 5e-96; HSPs: 80)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 471284 - 471088
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||   |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  471284 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgcgacgtt---tgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 471188  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  471187 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgcagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 471088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 115 - 305
Target Start/End: Original strand, 5333405 - 5333595
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||| | ||||||||||||||||| ||| |  |||||||||||||| |||||||| ||||| ||||||||||| ||||||||||||| ||||| |||    
T  5333405 agtgcggtgttgtgttgttcgtcgtcttgtgcggtgttgtttgattttgcgtcttgttccggtgttcgtttggttcctattgaaagatcaacttcagtca 5333504  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    |||| | ||||||||||| ||||| ||||||||||||||||||| |||||||| |||||||  ||||||||||||| ||||||||||||||    
T  5333505 atcacatattcaatcaattatttgggcgtcaacgttgtagatccagaagcatgagtattctagtgatttagattttgtcatattatttgta 5333595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 29617377 - 29617196
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | || |||||||||| | |||||||||||||| |||||||||||||||||||||| || ||||| ||||||| |||||    
T  29617377 tgtgttgttcgtcgtcttgtgcggcgctgtttgatttcgcgtcttgttgcggtgttcgtttggttcttattgaaagaccaacttcagtcaatcacagatt 29617278  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||  ||||||||||| ||||||  || ||| | ||||||| |||||||||||||||||||||||||||||    
T  29617277 caatcaatgatttggacgtcaacgttgcagatccataaacattgttattctggtgatttagattttatcatattatttgtag 29617196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 8443632 - 8443433
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||| | ||||||||||||||||| ||| | ||||||||||||  | |||||||||| ||| |||||||||||   ||||||||||| |    
T  8443632 gtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgattccgcgtcttgttgcagtgttcgtttggttcaatttgaaagatcaac 8443533  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| ||||||| | |||||||||||||||||  | ||||||||| |||||||||||||  |||||| || |||||||||||| ||||||||||||||||    
T  8443532 ttcagtcaatcacatattcaatcaatgatttggacatcaacgttgcagatccggaagcactggtattatggtgatttagatttgatcatattatttgtag 8443433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 39657426 - 39657621
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||| ||||||||||||| ||| | ||||||||||||| |  |||| |    ||||||| ||||||||||| ||||||||||| | |||||    
T  39657426 agtgcgacgttgtattgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagattagcttca 39657525  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||||| |||||||||||||||||  ||||||||||| |||||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  39657526 gacaatcataaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtag 39657621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 15344295 - 15344475
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | ||| |||||||||    ||||||||||||| ||||| ||||| |||||||||||||  |||| ||||||| |||||    
T  15344295 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgtt-ggttcatattgaaagatcaagttcagtcaatcacagatt 15344393  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| |||||||||||||||||    
T  15344394 caatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtag 15344475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 15433360 - 15433540
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | ||| |||||||||    ||||||||||||| ||||| ||||| |||||||||||||  |||| ||||||| |||||    
T  15433360 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgtt-ggttcatattgaaagatcaagttcagtcaatcacagatt 15433458  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| |||||||||||||||||    
T  15433459 caatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtag 15433540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 15524664 - 15524844
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | ||| |||||||||    ||||||||||||| ||||| ||||| |||||||||||||  |||| ||||||| |||||    
T  15524664 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttgacatcttgttgcggtgttcgtt-ggttcatattgaaagatcaagttcagtcaatcacagatt 15524762  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| |||||||||||||||||    
T  15524763 caatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtag 15524844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 18890816 - 18890621
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg--tgtcttgttgcg--gtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||||||||| ||| ||||||||||||||| |  | | |||||| |  ||| ||||||||||| ||||||||||||| |||||    
T  18890816 agtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcattttttgttgtgtggtgttcgtttggttcgtattgaaagatcagcttca 18890717  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | ||||||||||||||||| |||||||||||| |||||| ||| ||| |||||| || |||||||||||||||||||||||||||||    
T  18890716 gacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacataggtattatggtgatttagattttatcatattatttgtag 18890621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 1239517 - 1239319
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||||| |  |||||||||| |||||| ||| | ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| |    
T  1239517 gtcgtctaagtgcgaccttgtgttgttcatcgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaagatcaac 1239419  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| ||||||| | |||||||||||||| ||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| ||||||| |||||||||    
T  1239418 ttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatactatttgtag 1239319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 1236817 - 1236623
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||||| |  |||||||||||| |||| ||| | ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| |    
T  1236817 gtcgtctaagtgcgaccttgtgttgttcgttgtcttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaagatcaac 1236719  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||| ||||||| | |||||||||||||| ||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| ||||||| |||||    
T  1236718 ttcagtcaatcacatattcaatcaatgatctggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatactattt 1236623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 152 - 306
Target Start/End: Complemental strand, 14916263 - 14916110
Alignment:
Q  152 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 251  Q
    ||||||||||  ||||||||||||||| ||||||||||| |||||||||| || ||||| ||||||| |||||||||||||||||||  |||| | ||||    
T  14916263 tgtttgatttcatgtcttgttgcggtgttcgtttggttcatattgaaagaccaacttcaatcaatcagagattcaatcaatgatttggacgtccatgttg 14916164  T
Q  252 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     |||||||||||||||  |||| || ||||||||||||||||||||| |||||||    
T  14916163 cagatccggaagcatgaatatt-tgttgatttagattttatcatattgtttgtag 14916110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 181 - 306
Target Start/End: Original strand, 42046263 - 42046388
Alignment:
Q  181 cgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatga 280  Q
    |||||||||| ||||||||||||| |||||  |||||| | ||||||||||||||||| ||||||| |||| |||||| ||||||||||||||||| |||    
T  42046263 cgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatgttgcagatccagaagcatgggtattctggtga 42046362  T
Q  281 tttagattttatcatattatttgtag 306  Q
    ||||||||| ||||||||||||||||    
T  42046363 tttagatttcatcatattatttgtag 42046388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 127 - 306
Target Start/End: Original strand, 8826200 - 8826378
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattca 226  Q
    ||||||||||||||| ||||| |||||| ||| || |||||||||||||||| || |||| ||| |||||||| |||| ||||| | |||||| ||||||    
T  8826200 tgttgttcgtcgtcttgtgtggcgttgtgtgaattcgtgtcttgttgcggtgttc-tttgattcatattgaaatatcaacttcaatgaatcatcgattca 8826298  T
Q  227 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||| || ||||||||| | ||  ||||||||| || ||||| |||||| | ||||||||||||| ||||||    
T  8826299 atcaatgatttgggcatcaacgttgcatatttggaagcatgtgtgttctggtgattttgtttttatcatattacttgtag 8826378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 301
Target Start/End: Original strand, 34609801 - 34609998
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| || ||||||| |||||| ||| |||||| ||||||||||||||||||||||||| ||||||| |||  |||||||||||| |    
T  34609801 gtcgtctaagtgcggcgttgggttgttcctcgtcttgtgcgacgttatttgattttgtgtcttgttgcggtgttcgtttgtttc-cattgaaagatcaac 34609899  T
Q  207 ttcactcaatc----atagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
    |||| ||||||    | | || |||||||||||||| |||| ||||||| |||| ||  | |||| |||||| | |||||||| |||||||||||||||    
T  34609900 ttcagtcaatcagttacaaatgcaatcaatgatttgggcgtgaacgttgcagattcgagaacatgagtattccggtgatttaggttttatcatattatt 34609998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 14585718 - 14585844
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    ||||||||||| |||||||| |||| |||||  |||||| | ||||||||| |||||||  ||||||||||| |||||| ||||||||||||| ||| ||    
T  14585718 tcgtttggttcgtattgaaatatcagcttcagacaatcacaaattcaatcattgatttggacgtcaacgttgcagatccagaagcatgggtatcctggtg 14585817  T
Q  280 atttagattttatcatattatttgtag 306  Q
    |||||||||| ||||||||||||||||    
T  14585818 atttagatttcatcatattatttgtag 14585844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 306
Target Start/End: Original strand, 41896550 - 41896684
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||||||| ||||||||||||| |||||  |||||| | ||||||| ||||||||  || ||||||||| |||||  |||||||| |||    
T  41896550 tgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaattaatgatttaggcatcaacgttgcagatctagaagcatgagta 41896649  T
Q  272 ttctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||||||||| ||||||||||||||||    
T  41896650 ttctggtgatttagatttcatcatattatttgtag 41896684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 23230614 - 23230810
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| | |||| |||| ||||| ||||||  |    
T  23230614 gtcgtctaagtgcggcgatttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctac 23230710  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||| ||| |||||||||||| |||||||||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  23230711 atcagtcaattacaaattcaaccaatgacttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtag 23230810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 24099368 - 24099172
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    |||||| || ||||||||||||||||  ||    ||||||||||||| |  ||||||||||||| || |||||||| |||||||| |||| ||||| |||    
T  24099368 agtgcgacgttgtgttgttcgtcgtcctgtaccgcgttgtttgatttcgcatcttgttgcggtgttcatttggttcatattgaaaaatcagcttcagtca 24099269  T
Q  215 atc-----atagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||     | | ||||| |||||||||||| ||||||||||| ||||||||||| | |  |||| || |||||||||||||||||||||||||||||    
T  24099268 atcgcatcacaaattcattcaatgatttgtacgtcaacgttgcagatccggaagaaagaatattttggtgatttagattttatcatattatttgtag 24099172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 149 - 295
Target Start/End: Original strand, 21237800 - 21237946
Alignment:
Q  149 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacg 248  Q
    |||||||||| || | |||||||||| ||| ||||||||||| |||||||||| ||  |||| ||||||  | |||||||||||||||||  |||||| |    
T  21237800 cgttgtttgacttcgcgtcttgttgcagtgttcgtttggttcatattgaaagaccagtttcaatcaatcccatattcaatcaatgatttggacgtcaatg 21237899  T
Q  249 ttgtagatccggaagcatgggtattctgatgatttagattttatcat 295  Q
    ||| |||||| |||||||| ||| |||| ||||||||||||||||||    
T  21237900 ttgcagatccagaagcatgtgtactctgttgatttagattttatcat 21237946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 286
Target Start/End: Original strand, 3240366 - 3240527
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||  ||||||||||||||| | || |||||| |||| | ||||||||  ||||||||||||  ||||| ||||||| | |||    
T  3240366 tgtgttgttcgtcgtcttgtacgacgttgtttgatttcgcgtgttgttgtggtgtttgtttggttaatattgaaagatcggcttcagtcaatcacatatt 3240465  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 286  Q
    ||||| ||||||||  || ||| |||| |||||| |||| |||||||||||| |||||||||    
T  3240466 caatcgatgatttggacgccaatgttgcagatccagaagtatgggtattctggtgatttaga 3240527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 108 - 303
Target Start/End: Complemental strand, 16247340 - 16247148
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||||| |||||||||| |||||| ||| ||||||   ||||||   ||||||| |||||| |||||| |||| ||| ||||||||  |     
T  16247340 tcgtctaagtgcggcgttgtgttgttcatcgtcttgtgcgacgtt---tgatttcacgtcttgtcgcggtgttcgtttagttcctatggaaagatcgaca 16247244  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    ||| | ||| | | ||||||||||||||||| || |||| |||| |||||||||||||||||||||  | ||| |||||||| |||||||||||||    
T  16247243 tcaattaattacaaattcaatcaatgatttgggcatcaatgttgcagatccggaagcatgggtatttcgctgacttagatttgatcatattatttg 16247148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 20553359 - 20553163
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | |||||||||||||||  || | ||||   |||||||||||||||| |||||| | |||  |||| ||||||||||||       
T  20553359 gtcgtctaagtgcggcgttttgttgttcgtcgtcttatgcggcgtt---tgattttgtgtcttgtcgcggtgtttgttcagttcctattgaaagatctat 20553263  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||||||||||||| |||||  | ||| |||| ||||||||||||||||||||    
T  20553262 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaggttttatcatattatttgtag 20553163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 33347595 - 33347443
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    |||||||||  ||||||||||||||| || |||| | || |||||||||||| ||||| ||||||| ||||||||||||||||||  ||||| ||||||     
T  33347595 gtttgatttcatgtcttgttgcggtgttcatttgatcct-attgaaagatcaacttcagtcaatcacagattcaatcaatgatttaggcgtcgacgttgc 33347497  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     |||||| |||||||||||||  | ||| | ||| |||||||||||||||||||    
T  33347496 ggatccgaaagcatgggtatttcggtgactcagaatttatcatattatttgtag 33347443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 7677357 - 7677206
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||| | ||||||| |||||| ||||||||||| || ||||| |||| | ||| ||||| | |||||| | |||||||||| |||||||||||| |    
T  7677357 tttgatttcgcgtcttgtcgcggtgttcgtttggttcctactgaaatatcaacatcagtcaattacagattcgaccaatgatttgagcgtcaacgttgca 7677258  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||||||||||||||  ||||  | ||| |||| |||||||||||||||||||    
T  7677257 gatccggaagcatgaatatttcggtgacttaggttttatcatattatttgta 7677206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 3673412 - 3673608
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||| | |||||||||||||||||  ||   || |||||||||| |||||||||||||||| || ||| |||| ||||||||||||  |    
T  3673412 gtcgtctaagtgcggtgttgtgttgttcgtcgtcttatg---cggtgtttgatttcgtgtcttgttgcggtgttcctttagttcctattgaaagatcgac 3673508  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | ||  |||||||| |||| |||||||||||| ||||||||||||||| |||||    ||| |||  ||| ||||||||||||||||    
T  3673509 atcagtcaattacaaatcaaatcaatgctttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagtttaatcatattatttgtag 3673608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 306
Target Start/End: Complemental strand, 26469209 - 26469068
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 264  Q
    |||||||||  ||| |||||| |||| |||||||||||||  || | | ||||  | ||||||||||||||||| |||||||||||||  ||| | | ||    
T  26469209 gtcttgttgtagtgttcgttttgttcctattgaaagatcaagtttagttaatcgcatattcaatcaatgatttgggcgtcaacgttgtgcatctgaatgc 26469110  T
Q  265 atgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| |||||||| |||||||||||||||||||||||||||||    
T  26469109 atgtgtattctggtgatttagattttatcatattatttgtag 26469068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 305
Target Start/End: Complemental strand, 40619190 - 40618996
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||||| ||||||||| ||||||| ||||||||||   |||||| ||||||| | |||||| || ||| ||||||||| |||||||  |     
T  40619190 tcgtctaagtgcggcgttgtgttgtttgtcgtcttgtgtgacgtt---tgatttcgtgtcttatcgcggtgttcatttagttcttattcaaagatcgaca 40619094  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
      | ||||| | | ||||||||||| ||||| |||||||||||| |||||| |||||||| |||||  |  || ||| ||||||||||||||| ||||    
T  40619093 atagtcaattacaaattcaatcaataatttgggcgtcaacgttgcagatccagaagcatgagtatttcgcagacttaaattttatcatattatgtgta 40618996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 43834043 - 43833918
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    ||||||||||| ||||||| ||| | |||||  |||||| | ||||||||||||||||   ||||||||||| |||||  |||||||| |||||||| ||    
T  43834043 tcgtttggttcctattgaa-gattaacttcagacaatcacaaattcaatcaatgatttagacgtcaacgttgcagatctagaagcatgagtattctggtg 43833945  T
Q  280 atttagattttatcatattatttgtag 306  Q
    |||||| ||||||||||||||||||||    
T  43833944 atttagtttttatcatattatttgtag 43833918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 268
Target Start/End: Original strand, 8981155 - 8981292
Alignment:
Q  132 ttcgtcgtctg-gtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatca 230  Q
    ||||||||||| ||| | |||| |||||||| | |||||||||||||| ||||||| ||  ||||||||||||| | ||| ||||||| |||||||||      
T  8981155 ttcgtcgtctgagtgcggcgttttttgatttcgcgtcttgttgcggtgttcgtttgtttgatattgaaagatcagcgtcagtcaatcacagattcaattg 8981254  T
Q  231 atgatttgtgcgtcaacgttgtagatccggaagcatgg 268  Q
    ||||||||  ||||||||||  ||||||||||||||||    
T  8981255 atgatttggacgtcaacgttacagatccggaagcatgg 8981292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 14545021 - 14544825
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| || ||||||| ||| ||||| ||||||| ||||| ||||   ||||||   ||||||| |||||| || ||| |||| ||||||||||||  |    
T  14545021 gtcgtctaattgcggcgttgttttgttagtcgtcttgtgtggcgtt---tgatttcacgtcttgtcgcggtgttcatttagttcctattgaaagatcgac 14544925  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | |  || ||||||| ||||| |||||||||||| ||||||||||||||||| |||  | ||| ||| |||||||||||||||||||||    
T  14544924 atcaatcaattacaagttaaatcaattatttgggcgtcaacgttgcagatccggaagcatgggaatttcggtgacttaaattttatcatattatttgtag 14544825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 17693689 - 17693536
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||||| || |||| |||||| | |||| |||| |||| |||||||  | ||| ||||| | | |||||| |||||||||| |||||||| |||     
T  17693689 gtttgattttgcgttttgtcgcggtgtttgtttagttcctattaaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacattgc 17693590  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||| |||||  ||||| |||  ||||||||||||||||||||    
T  17693589 agatccggaagcatgagtatttcgatgacttatgttttatcatattatttgtag 17693536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 27110540 - 27110387
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||||| ||||||| || ||| |||||| |||| | |||||||||   | |||  |||  | | ||||||||||||||||| ||||||||||||     
T  27110540 gtttgattttgcgtcttgtcgcagtgttcgtttagttcatgttgaaagattgacatcagacaactacaaattcaatcaatgatttgagcgtcaacgttgc 27110441  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||| ||||||||| ||||| |  ||| |||||||||||||||||||||||||    
T  27110440 agatctggaagcatgtgtattttagtgacttagattttatcatattatttgtag 27110387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 8867888 - 8867972
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||| || |||| |||| ||||| |||||| ||| ||||||| |||||||||||||||||||||||||||||    
T  8867888 attcaatcaatgatttgggcatcaaagttgaagatctggaagcttggatattctggtgatttagattttatcatattatttgtag 8867972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 217 - 303
Target Start/End: Complemental strand, 7198206 - 7198120
Alignment:
Q  217 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    |||| |||||||||||||||||   |||||||||| |||||||||||||||  |||| || ||||||||||||||||||||||||||    
T  7198206 cataaattcaatcaatgatttggatgtcaacgttgcagatccggaagcatgaatattttggtgatttagattttatcatattatttg 7198120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 306
Target Start/End: Complemental strand, 7883352 - 7883163
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| ||||||||||||||||| ||| | ||||   ||||||   ||||||| |||||| | |||  |||| ||||||||||||  | | | ||    
T  7883352 aagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcacgtcttgtcgcggtgtttgttcagttcatattgaaagatctacattaatc 7883256  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| |||| |||||  ||||| ||||| |||||||||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  7883255 aattacaaattcaagcaataatttggacgtcagcgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtag 7883163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 304
Target Start/End: Complemental strand, 20559818 - 20559668
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||||||||||||  |||||| | |||  |||| ||||||||||||    ||| ||||| | | |||||| ||||||||||  ||||||||||| |    
T  20559818 tttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgca 20559719  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattatttgt 304  Q
    |||||||||||||| |||||  | ||| |||| ||||||||||||||||||    
T  20559718 gatccggaagcatgagtatttcggtgacttaggttttatcatattatttgt 20559668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 304
Target Start/End: Complemental strand, 20571380 - 20571230
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||||||||||||  |||||| | |||  |||| ||||||||||||    ||| ||||| | | |||||| ||||||||||  ||||||||||| |    
T  20571380 tttgattttgtgtcttggcgcggtgtttgttcagttcctattgaaagatctatatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgca 20571281  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattatttgt 304  Q
    |||||||||||||| |||||  | ||| |||| ||||||||||||||||||    
T  20571280 gatccggaagcatgagtatttcggtgacttaggttttatcatattatttgt 20571230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 45445847 - 45445733
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||  | ||| ||||| | | |||||| |||||||||| |||||||||||| | ||||||||||||| | ||| || ||| ||||||||||    
T  45445847 tattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaaaatccggaagcatgtgaattttggtgacttagatttta 45445748  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  45445747 tcatattatttgtag 45445733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 28897723 - 28897876
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | ||||||| | |||| |||||| |||| ||||||||||||  | ||| ||||| |||  |||||| ||||||||| |||| |||||||     
T  28897723 gtttgatttcgcgtcttgtcgtggtgttcgtttagttcctattgaaagatcgacatcagtcaattataagttcaattaatgatttgggcgtaaacgttgc 28897822  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||| || |  |||  ||||| |||||||||||||||||||||||||    
T  28897823 agatacggaagtattgaaatttcgatgacttagattttatcatattatttgtag 28897876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 152 - 305
Target Start/End: Complemental strand, 40211378 - 40211225
Alignment:
Q  152 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 251  Q
    |||||||||| | || |||| |||||| | |||| |||  ||||||||||||  | ||| || || | | |||| | |||||||||| ||||||||||||    
T  40211378 tgtttgatttcgcgtattgtcgcggtgtttgtttagtttctattgaaagatctacatcagtcgattacaaattccaccaatgatttgggcgtcaacgttg 40211279  T
Q  252 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    |||||||||||||||| |||||  | ||| || |||||||||||||||||||||    
T  40211278 tagatccggaagcatgagtatttcgttgacttggattttatcatattatttgta 40211225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 114 - 306
Target Start/End: Original strand, 10377667 - 10377856
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| ||||||||||| ||||| ||| | ||||   |||||| | || |||| | |||| | |||  |||| ||||||||||||  | ||| ||    
T  10377667 aagtgcggcgttgtgttgttcgccgtcttgtgcggcgtt---tgatttcgcgttttgtcgtggtgtttgttcagttcctattgaaagatctacatcagtc 10377763  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||| |||||| ||||||||||  | ||||||||| |||||||||||||||||||||  |  || |||  ||||||||||||||||||||    
T  10377764 aattataaattcaaccaatgatttggacatcaacgttgcagatccggaagcatgggtatttcggcgacttaagttttatcatattatttgtag 10377856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 25191167 - 25190987
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | ||||   |||||| |  | |||| |||||| | ||||  ||| ||||||||||||| | ||| ||||| ||  |||    
T  25191167 tgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttgtcgcggtgtttgtttatttcctattgaaagatcagcatcagtcaattatgaatt 25191071  T
Q  225 caatcaatgat--ttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| |||||||  ||| |||||||||||| ||||||||||||||| | |||  ||||| |||| ||||||||||||||||||||    
T  25191070 caaccaatgatatttgggcgtcaacgttgaagatccggaagcatgtgaattgcgatgacttaggttttatcatattatttgtag 25190987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 302
Target Start/End: Complemental strand, 33214746 - 33214597
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | ||||||| | |||| || ||| |||| ||||||||||||  | ||| ||||| | | |||||| |||||||||| || |||||||||     
T  33214746 gtttgatttcgcgtcttgtcgtggtgttcttttagttcctattgaaagatcggcgtcagtcaattacaaattcaaccaatgatttgggcttcaacgttgc 33214647  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    ||||||||||||||| | |||  ||||| |||  ||||||||||||||||    
T  33214646 agatccggaagcatgtgaatttcgatgacttatgttttatcatattattt 33214597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 212 - 292
Target Start/End: Original strand, 10331164 - 10331244
Alignment:
Q  212 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 292  Q
    ||||||| ||||||||||||| |||||  |||||||| ||||||||| |||||||| |||||||  |||||||||||||||    
T  10331164 tcaatcaaagattcaatcaataatttgaacgtcaacggtgtagatccagaagcatgagtattctagtgatttagattttat 10331244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 166 - 257
Target Start/End: Complemental strand, 19444126 - 19444035
Alignment:
Q  166 tcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatc 257  Q
    ||||||||||||| ||||||| |||||||| ||||| |  ||||| |||||||||||||| || ||||||||| ||| |||| |||||||||    
T  19444126 tcttgttgcggtgttcgtttgattcttattaaaagaccgacttcagtcaatcatagattctattaatgatttgggcgacaactttgtagatc 19444035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 204
Target Start/End: Complemental strand, 26469326 - 26469232
Alignment:
Q  110 gtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 204  Q
    ||||||||||| || | |||||||| |||||| |||  ||||||||||| ||  ||||||||||| ||| ||||||||||| |||||||||||||    
T  26469326 gtccaagtgcgacgttatgttgttcatcgtcttgtgcaacgttgtttgacttcatgtcttgttgcagtgttcgtttggttcctattgaaagatca 26469232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 35580470 - 35580546
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| ||||||||||||||||  ||||| |||||||| ||||||| ||| ||||||| ||||    
T  35580470 tgttgttcgtcgtcttgtgcgacgttgtttgattttccgtcttcttgcggtgttcgtttgattcatattgaatgatc 35580546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 24186666 - 24186587
Alignment:
Q  223 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||||||||| ||||| |||||||||||| ||||||| |||||||||||||    ||| ||| |||||||||||||||||    
T  24186666 ttcaatcaataatttgggcgtcaacgttgcagatccgaaagcatgggtatttcagtgacttaaattttatcatattattt 24186587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 306
Target Start/End: Original strand, 37971331 - 37971450
Alignment:
Q  187 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 286  Q
    |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||| |||| |||||  | ||| ||||     
T  37971331 gttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgagtatttcggtgacttagg 37971430  T
Q  287 ttttatcatattatttgtag 306  Q
    |||||||| |||||||||||    
T  37971431 ttttatcacattatttgtag 37971450  T

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Target: chr8; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 16928793 - 16928679
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||  | ||| ||||| | | |||||| ||||||||||  | ||||||||| ||||||| |||| ||||||||  | ||| |||| |||||    
T  16928793 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttggacatcaacgttgcagatccgaaagcgtgggtatttcggtgacttaggtttta 16928694  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  16928693 tcatattatttgtag 16928679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 31013683 - 31013530
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| |  |||||| |||||| | |||  |||| |||||||| |||  | ||| ||||| | | |||||||||||||||||  |||||||||||     
T  31013683 gtttgatttcgcatcttgtcgcggtgtttgttcagttcctattgaaatatctacatcagtcaattaaaaattcaatcaatgatttggacgtcaacgttgc 31013584  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||||||| |||||    ||| |||  ||||||||||||||||||||    
T  31013583 agattcggaagcatgtgtatttcagtgacttaagttttatcatattatttgtag 31013530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 27747103 - 27747051
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    |||||||||| |||||| || ||||||||||||||||||| ||||||||||||    
T  27747103 attcaatcaaagatttgggcatcaacgttgtagatccggatgcatgggtattc 27747051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 30568327 - 30568243
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| |||||||||| |||||||||||| |||||  |||||||| | |||  ||||| |||| ||||||||| ||||||||||    
T  30568327 attcaaccaatgatttgagcgtcaacgttgaagatcttgaagcatgtgaatttcgatgacttaggttttatcatgttatttgtag 30568243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 24419202 - 24419087
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga-tttt 290  Q
    |||||||||||||  |||| |||| || | ||||||||||||||||   ||||||||||||| |||| |||||||   ||||||||  ||||| | ||||    
T  24419202 tattgaaagatcagtttcagtcaaccaaatattcaatcaatgattttgacgtcaacgttgtaaatccagaagcataaatattctgacaatttaaattttt 24419103  T
Q  291 atcatattatttgtag 306  Q
    ||| ||||||||||||    
T  24419102 atcttattatttgtag 24419087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 188 - 306
Target Start/End: Complemental strand, 28086853 - 28086734
Alignment:
Q  188 ttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatga-tttaga 286  Q
    ||||| ||||||||||  ||||| | ||| | | |||||||||||||||||   |||||||||| ||||||| || ||| ||||||    ||| ||||||    
T  28086853 ttcttgttgaaagatcgacttcagttaattacaaattcaatcaatgatttggaagtcaacgttgcagatccgtaaacattggtatttcagtgattttaga 28086754  T
Q  287 ttttatcatattatttgtag 306  Q
    ||||||||||||||||||||    
T  28086753 ttttatcatattatttgtag 28086734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 248 - 306
Target Start/End: Complemental strand, 18846446 - 18846388
Alignment:
Q  248 gttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||| |||||| |||| ||||| || ||||||||||||||| |||||||||||||    
T  18846446 gttgtagacccggaaacatgagtattatggtgatttagattttattatattatttgtag 18846388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 115 - 201
Target Start/End: Original strand, 34493041 - 34493127
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaaga 201  Q
    |||||| || |||||||||||| |||  ||| |  ||||||||| ||||| ||||||||||||| ||||||||||| || |||||||    
T  34493041 agtgcgacgttgtgttgttcgttgtcatgtgcggtgttgtttgaatttgtctcttgttgcggtgttcgtttggttcctactgaaaga 34493127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 256 - 306
Target Start/End: Original strand, 41684499 - 41684549
Alignment:
Q  256 tccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||||||||||  ||||| |||||||||||||||||||||||||    
T  41684499 tccgaaagcatgggtatttcgatgacttagattttatcatattatttgtag 41684549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 44100005 - 44099928
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 204  Q
    ||||||||||||||| ||| | |||||||||||||   ||||| |||||||| || |||| ||| |||||||||||||    
T  44100005 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttttgcggtgttcatttgattcatattgaaagatca 44099928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 4808977 - 4809053
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  4808977 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 4809053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 9637483 - 9637335
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||| | ||||| |||| ||  |||||| |||| ||||||||||||| | ||| | ||| | | |  |||| ||||||||| |||||||||||| |    
T  9637483 tttgatttcgcgtcttattgcagtattcgtttagttcctattgaaagatcaacatcagttaattacaaacacaattaatgatttgagcgtcaacgttgca 9637384  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    ||| ||||| |||| |||||  | | | |||| ||||||||||||||||    
T  9637383 gattcggaaacatgagtatttcggtaacttaggttttatcatattattt 9637335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 297
Target Start/End: Complemental strand, 31634384 - 31634213
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    |||| ||||||| |||| ||||| |||||||||||||| |||| |||| || || ||||||| |||||||| ||||||    |||| ||||| | | |||    
T  31634384 tgtggtgttcgttgtcttgtgtg-cgttgtttgattttctgtcatgttacgatgttcgtttgattcttatttaaagattgaattcagtcaattacatatt 31634286  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatat 297  Q
     ||||||||||||  |||||||  ||| | ||| ||| ||| |||||||||  | | || |||||||||||||    
T  31634285 taatcaatgatttaagcgtcaaaattgcaaatctggatgcaagggtattctagtcactttgattttatcatat 31634213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 198
Target Start/End: Original strand, 11196902 - 11196973
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaa 198  Q
    ||||||||||||||| ||| | ||||||||||||||  ||||| |||||||| || |||| ||| |||||||    
T  11196902 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaa 11196973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 202
Target Start/End: Complemental strand, 24419289 - 24419202
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||| |||||| |||||||| | ||| ||| ||||||||||| |||| | |||| | || || |||||||| |||||||||||    
T  24419289 agtgcggcgttgtgtttttcgtcgtattgtgagacattgtttgatttcgtgtttggttgtgatgttcatttggttcatattgaaagat 24419202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 302
Target Start/End: Complemental strand, 27498464 - 27498292
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| ||| ||   |||||| | ||||||| | |||| || |||  ||| ||||||||||||| ||||| | | | | | |||    
T  27498464 tgtgttgttcgtcgtcttgtgcgacatt---tgatttcgcgtcttgtcgtggtgttcatttaattcctattgaaagatcaacttcagttagt-acaaatt 27498369  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||| ||||||||| |||||||| ||| ||||  |||| |||||   ||| | |||||||||||||||||||||||||    
T  27498368 caattaatgatttgggcgtcaacattgcagatttggaaacatggtatttcag-tgatttagattttatcatattattt 27498292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 27747186 - 27747107
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 204  Q
    ||||||||||||| ||| ||| |||  ||||||||||  ||| ||||||||||| || |||| ||| |||||||||||||    
T  27747186 tgtgttgttcgtcatcttgtgcgacagtgtttgatttcctgttttgttgcggtgttcatttgattcatattgaaagatca 27747107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 5046794 - 5046920
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    ||||||||||| |||||||| ||||  |||| ||||| | ||||||||||||| |||||  |||| |||||| |||| |  || ||||  ||||    ||    
T  5046794 tcgtttggttcctattgaaaaatcaaattcagtcaattacagattcaatcaataatttggacgtcgacgttgcagattcataaacatgaatatttcagtg 5046893  T
Q  280 atttagattttatcatattatttgtag 306  Q
    | ||||| |||||||||||||||||||    
T  5046894 acttagaatttatcatattatttgtag 5046920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 28239927 - 28239973
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgg 268  Q
    |||||||||| |||||| |||||||||||| ||||||||| ||||||    
T  28239927 attcaatcaaagatttgagcgtcaacgttgcagatccggaggcatgg 28239973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 206
Target Start/End: Complemental strand, 17427289 - 17427208
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||| |||||| ||| | |||||||| ||||| ||||||| | || || || |||| |||||||||||||||||||    
T  17427289 tgtgttattcttcgtcttgtgcgccgttgtttaattttttgtcttgctacgatgttcatttgcttcttattgaaagatcatc 17427208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 24853511 - 24853458
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtg 178  Q
    ||||||||||||||||  ||||||| |||||||||||   ||||||||||||||    
T  24853511 tgtgttgttcgtcgtcctgtgtgacattgtttgatttctcgtcttgttgcggtg 24853458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 195
Target Start/End: Complemental strand, 37663101 - 37663064
Alignment:
Q  158 attttgtgtcttgttgcggtgctcgtttggttcttatt 195  Q
    |||||| |||||||||||||| ||||||||||||||||    
T  37663101 attttgcgtcttgttgcggtgttcgtttggttcttatt 37663064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 9619428 - 9619352
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  9619428 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9619352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 11464184 - 11464260
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  11464184 tgttgttcgtcgtcttgtgcggcgttgtttgatttctagtctttgtgcggtgttcatttgattcatattgaaagatc 11464260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 12184372 - 12184456
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||||||||| |||||| |||||  ||| |||| ||||  ||||||||   ||||  |||||||||||||||||||||    
T  12184372 attccatcaatgatttgggcgtcaccgttgctgattcggaggcatatgtattctggacattttaattttatcatattatttgtag 12184456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 12428800 - 12428884
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||||||||| |||||| |||||  ||| |||| ||||  ||||||||   ||||  |||||||||||||||||||||    
T  12428800 attccatcaatgatttgggcgtcaccgttgctgattcggaggcatatgtattctggacattttaattttatcatattatttgtag 12428884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 17427206 - 17427154
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    |||||||||||||||||  ||||||| ||| |||||| ||| |||||||||||    
T  17427206 attcaatcaatgatttggacgtcaacattgaagatccagaaacatgggtattc 17427154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 29939383 - 29939467
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| |||||||||| |||| ||||||| | ||||  ||||||| |||||    ||| |||| ||||||||||||||||||||    
T  29939383 attcaaccaatgatttgggcgttaacgttgcatatccataagcatgagtatttcagtgacttaggttttatcatattatttgtag 29939467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 39450552 - 39450640
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttg 238  Q
    |||||||||||||  || || ||| |||| |||||||||| || ||||||||||| ||| | ||||| | | |||||||||| ||||||    
T  39450552 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttg 39450640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 43192417 - 43192341
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | ||||||||||||||  ||||| ||| |||| || |||| ||| | ||||||||||    
T  43192417 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgtggtgttcatttgattcattttgaaagatc 43192341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 91)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 52944305 - 52944496
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| ||||||||||||||| | ||| | |||||||| |||||| |||||||||||||| ||||||| ||| ||||||||||||| ||||| |||    
T  52944305 agtgcggcgttgtgttgttcgtcgttttgtgcggcgttgtttaattttgcgtcttgttgcggtgttcgtttgtttcatattgaaagatcagcttcagtca 52944404  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||||||| ||||||||  ||||||||||| |||||||||||||||||||||||| |||||||||||| |||||||| |||||||    
T  52944405 atcacagattcaatcgatgatttggacgtcaacgttgcagatccggaagcatgggtattctggtgatttagatttcatcatattttttgtag 52944496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 116 - 305
Target Start/End: Complemental strand, 33332685 - 33332494
Alignment:
Q  116 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||| ||||||||| |||| || ||| ||||||||||||||| |  ||||||||  ||||| |||||| ||| |||||||||||||| |||||  |    
T  33332685 gtgcggcgttgtgttgtttgtcgccttgtgcgacgttgtttgatttcgcatcttgttgtgcggtgttcgtttcgtttttattgaaagatcaacttcagac 33332586  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||||| |||||||||||||||||||  ||||||||||| ||||||  ||| ||||| ||| |||||||||||||||||||||||||||||||    
T  33332585 aatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaagaatgggcattttgatgatttagattttatcatattatttgta 33332494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 51888326 - 51888135
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| |||||||||| ||||||  || ||||||||||||||| |  ||||||||||||| ||||||||||| ||||||||||||| ||||| |||    
T  51888326 agtgcggcgttgtgttgttcatcgtcttatgcgacgttgtttgatttcgcatcttgttgcggtgttcgtttggttcatattgaaagatcaacttcaatca 51888227  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| | ||| ||||||||||||    || ||||||| | ||| | ||||||| |||||||| |||||||||||||||||||||||||||||    
T  51888226 atcacaaatttaatcaatgattttgatgttaacgttgcatatctgaaagcatgagtattctggtgatttagattttatcatattatttgtag 51888135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 129 - 306
Target Start/End: Original strand, 9048672 - 9048849
Alignment:
Q  129 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaat 228  Q
    ||||| ||||||| ||| | |||||| |||||| | |||||||||||||| ||||||||||  | ||||||||| | ||||| | ||||| | |||||||    
T  9048672 ttgtttgtcgtcttgtgcggcgttgtctgatttcgggtcttgttgcggtgttcgtttggtttcttttgaaagataagcttcagttaatcacaaattcaat 9048771  T
Q  229 caatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||| |||||||||||| | ||| | || ||||||||||||||||||||| |||||||||||||||||||||    
T  9048772 caatgatttgagcgtcaacgttgcaaatctgaaaacatgggtattctgatgatttaaattttatcatattatttgtag 9048849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 114 - 306
Target Start/End: Original strand, 10496331 - 10496520
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| ||||||||||||||||| ||||||||||   |||||||| ||||||| || ||| |||||| |||| ||||||||||||  | ||| ||    
T  10496331 aagtgcggcgatgtgttgttcgtcgtcttgtgtgacgtt---tgattttgcgtcttgtcgcagtgttcgtttagttcctattgaaagatcggcatcagtc 10496427  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| |||||||||| |||||||| ||| ||||||| |||||||||||||  | ||| |||| ||||||||||||||||||||    
T  10496428 aattacaaattcaaccaatgatttgggcgtcaactttgcagatccgtaagcatgggtatttcggtgagttaggttttatcatattatttgtag 10496520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 108 - 306
Target Start/End: Original strand, 28857389 - 28857586
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||||| |||||||||||| |||| ||| | ||||||||||||  | |||| ||||||||| ||||||| ||| ||||||||||||| ||    
T  28857389 tcgtctaagtgcggcgttgtgttgttcgttgtcttgtgcggcgttgtttgattccgcgtctagttgcggtgttcgtttgtttcatattgaaagatcagct 28857488  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||||| | |||||||  ||||||||  || |||||||  |||||||||||||| ||| ||||| |||||||||||| |||||||| |||||||    
T  28857489 tcagtcaatcacatattcaattgatgatttggacgccaacgtttcagatccggaagcat-ggttttctggtgatttagatttcatcatattttttgtag 28857586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 107 - 295
Target Start/End: Original strand, 9643374 - 9643562
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    ||||||| |||||| || ||||||||||||||||| | | |||||||||||||||    ||||||||| ||| ||||||||||| |||| |||||||| |    
T  9643374 gtcgtccgagtgcgacgttgtgttgttcgtcgtcttgagcgacgttgtttgatttctcatcttgttgcagtgttcgtttggttcatattaaaagatcaac 9643473  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcat 295  Q
    |||| ||||||| | ||||||| |||||||||  | |||| ||| |||||||||||| ||| |||||||| ||||||| ||||||||||    
T  9643474 ttcagtcaatcacatattcaattaatgatttgaacatcaatgttatagatccggaagtatgagtattctggtgatttaaattttatcat 9643562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 22038907 - 22038726
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||| | | ||||| ||||||||||||| | ||||||||| |||||||||||||||| ||||||||||||  ||||| ||||||| | |||    
T  22038907 tgtgttgttcgtccttttgtgtggcgttgtttgatttcgcgtcttgttgtggtgctcgtttggttcatattgaaagatctacttcagtcaatcacatatt 22038808  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| ||||||||   | |||| |||| |||||| |||||||| |||||  | ||||||| ||||||||||| |||||||||    
T  22038807 caataaatgattttgacatcaatgttgcagatccagaagcatgtgtatttcggtgatttaaattttatcataatatttgtag 22038726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 36194699 - 36194893
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||||||||| ||| | ||||||||||||| |  ||  ||||||  ||||| ||||||||||| ||||||||||||| |||||    
T  36194699 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttca 36194798  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | |||||||||||||||||  | |||| |||| |||||| ||| ||||||||||||| |||||||||||| ||||||||||||||||    
T  36194799 aacaatcacaaattcaatcaatgatttga-catcaaagttgcagatccagaaacatgggtattctggtgatttagatttcatcatattatttgtag 36194893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 306
Target Start/End: Original strand, 21662466 - 21662622
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 249  Q
    |||||||||||| | ||||||| |||||  |||||| |||| ||||||||||||| | ||| ||||| | | || |||||||||||||| ||||||||||    
T  21662466 gttgtttgatttcgcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgt 21662565  T
Q  250 tgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    || |||||||||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  21662566 tgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtag 21662622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 150 - 306
Target Start/End: Original strand, 21671230 - 21671386
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 249  Q
    |||||||||||| | ||||||| |||||  |||||| |||| ||||||||||||| | ||| ||||| | | || |||||||||||||| ||||||||||    
T  21671230 gttgtttgatttcgcgtcttgtcgcggtattcgtttagttcctattgaaagatcaacatcagtcaattacaaatccaatcaatgatttgagcgtcaacgt 21671329  T
Q  250 tgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    || |||||||||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  21671330 tgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtag 21671386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 130 - 305
Target Start/End: Complemental strand, 2069680 - 2069505
Alignment:
Q  130 tgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatc 229  Q
    |||||||| ||  ||| ||||||||||||||| |  ||||||||||||  || |||||||| |||||||| ||||  || | ||||||||||||||||||    
T  2069680 tgttcgtcatcctgtgcgacgttgtttgatttcgcatcttgttgcggtattcatttggttcatattgaaatatcagttttagtcaatcatagattcaatc 2069581  T
Q  230 aatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||| ||||| | |||||||||| | ||   |||||||||||||| || ||||||| ||||||||||||||||||||    
T  2069580 aattatttgggtgtcaacgttgcaaatttagaagcatgggtattatggtgatttatattttatcatattatttgta 2069505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 306
Target Start/End: Original strand, 18935833 - 18935967
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||||||| ||||||||||| | |||||  |||||| | ||||||| ||||||||| || ||||||||| ||||||  |||||| ||||    
T  18935833 tgcggtgttcgtttggttcgtattgaaagattaacttcagacaatcaaaaattcaattaatgatttgggcatcaacgttgcagatccaaaagcataggta 18935932  T
Q  272 ttctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||||||||| ||||||||||||||||    
T  18935933 ttctggtgatttagatttcatcatattatttgtag 18935967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 31891406 - 31891211
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||||||||| ||||  ||||||||||||| |  ||  ||||||  ||||| ||||||||||| |||||||| ||||  ||||    
T  31891406 agtgcgacgttgtgttgttcgtcgtcttgtgtagcgttgtttgatttcgcatccgttgttgtgcggtgttcgtttggttcgtattgaaaaatcagtttca 31891307  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | |||||| | |||||||| |||||||||||| | |||| |||||||| |||||||| |||||||||||| || |||||||||||||    
T  31891306 gacaatcacaaattcaaaccatgatttgggcgtcaacgttgcaaatccagaagcatgagtattctggtgatttagatttcattatattatttgtag 31891211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 129 - 306
Target Start/End: Original strand, 36161719 - 36161896
Alignment:
Q  129 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaat 228  Q
    |||||||| |||| ||| | ||||||||||||||  || ||||||||||| |||||| |||| ||| ||||||| |  |||| ||||||| | |||||||    
T  36161719 ttgttcgttgtcttgtgcgtcgttgtttgattttacgttttgttgcggtgttcgttttgttcatatcgaaagattagtttcagtcaatcacatattcaat 36161818  T
Q  229 caatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||  || |||||||  ||||||| || |||| ||||| |  |||||||||||||||||||||||||||||    
T  36161819 caatgatttggacgccaacgttacagatccgaaaacatgagtattttcgtgatttagattttatcatattatttgtag 36161896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 36204508 - 36204303
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtga-cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcat 205  Q
    |||||| |||||||||| ||||||||||||||||  ||  |  ||||||||||||| |  | ||||||||||| || |||||||| |||||||| ||||     
T  36204508 gtcgtctaagtgcggcgttgtgttgttcgtcgtcctgtacgggcgttgtttgatttcgcatattgttgcggtgttcatttggttcatattgaaaaatcag 36204409  T
Q  206 cttcactcaatcatag-----attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattat 300  Q
    ||||| ||||||| |      |||||||||||||||||  ||||||||||| |||||||||||   |  ||||||| |||||||||||||||||||||||    
T  36204408 cttcagtcaatcacatcacaaattcaatcaatgatttggacgtcaacgttgcagatccggaagagagaatattctggtgatttagattttatcatattat 36204309  T
Q  301 ttgtag 306  Q
    ||||||    
T  36204308 ttgtag 36204303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 55227982 - 55228163
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||| ||||||| |||  |||||||| ||||||| || || |||||||| ||||||| ||| |||| | | |||| ||||  |||||||  ||||    
T  55227982 tgtgttgtttgtcgtcttgtgcaacgttgttagattttgcgttttattgcggtgttcgtttgattcctattaacaaatcaacttcggtcaatcacggatt 55228081  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||||||||| |||||||||||||| ||||| ||||||| || ||||  |||||||||||| ||||||||||||||||    
T  55228082 tcatcaatgatttgcgcgtcaacgttgtatatccgaaagcatgagtgttctcgtgatttagatttaatcatattatttgtag 55228163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 17949444 - 17949249
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||| ||||| | ||| | ||||   |||||||| || |||| |||||| ||||||  ||| ||||||||||||  |    
T  17949444 gtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtt---tgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctac 17949348  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
     ||| ||||| | | |||||| |||||||| | |||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||||||| ||||    
T  17949347 atcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttaggttttatcatattatatgta 17949249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 17953296 - 17953101
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||| ||||| | ||| | ||||   |||||||| || |||| |||||| ||||||  ||| ||||||||||||  |    
T  17953296 gtcgtctaagtgcggcgttgtgttgtttgtcgtgttgtgcggcgtt---tgattttgcgttttgtcgcggtgttcgtttaattcctattgaaagatctac 17953200  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
     ||| ||||| | | |||||| |||||||| | |||||||||||| ||||||||||| ||||||||| |||||| |||| |||||||||||||| ||||    
T  17953199 atcagtcaattacaaattcaaccaatgattggagcgtcaacgttgcagatccggaagaatgggtattttgatgacttaggttttatcatattatatgta 17953101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 27651944 - 27652128
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 220  Q
    ||||||||||||||||| ||| |  |||||||||||| |  ||  ||||||  ||||| ||||||||||| ||||||||||||| ||| |  |||||| |    
T  27651944 tgtgttgttcgtcgtcttgtgcggtgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagctttagacaatcaca 27652043  T
Q  221 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||||||||||||||||| |  ||||||||| |||||| ||||||||||||||||  || ||||||||| ||||||||||||||||    
T  27652044 aattcaatcaatgatttgggtatcaacgttgcagatccagaagcatgggtattctagtg-tttagatttcatcatattatttgtag 27652128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 175 - 306
Target Start/End: Complemental strand, 1621559 - 1621433
Alignment:
Q  175 ggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    |||| ||||||||||| ||||||||||||| |||||  |||||||| ||||||||||||||||| |||| ||||||| |||||| |||    ||||||||    
T  1621559 ggtgttcgtttggttcgtattgaaagatcagcttcaaacaatcataaattcaatcaatgatttgggcgt-aacgttgcagatccagaa----gggtattc 1621465  T
Q  275 tgatgatttagattttatcatattatttgtag 306  Q
    || |||||||||||| ||||||||||||||||    
T  1621464 tggtgatttagatttcatcatattatttgtag 1621433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 21686361 - 21686166
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||||  |||||| | |||  |||| ||||||||||||  |    
T  21686361 gtcgtctaagtgcggcg-tgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgccgcggtgtttgttcagttcctattgaaagatctac 21686266  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||| | | | |||||| ||||||||||  ||||||||||| ||||||||||||||| ||||| || |||||||| ||||||||||||||||||||    
T  21686265 atcaatcagttacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgagtattttggtgatttaggttttatcatattatttgtag 21686166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 22611172 - 22611368
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||||| || |||| |||||| | |||  |||| ||||||||||||  |    
T  22611172 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgttttgtcgcggtgtttgttcagttcctattgaaagatctac 22611268  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||||||||||||| |||||  | ||| |||  ||||||||||||||||||||    
T  22611269 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatttgtag 22611368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 306
Target Start/End: Complemental strand, 12199769 - 12199617
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||||| |||||||||||||| |||||| |||| |||||||| |||| ||||| ||| | | |||||||||||| |||||| ||||| |||||  |    
T  12199769 tttgattttgcgtcttgttgcggtgttcgtttagttcatattgaaatatcaacttcagtcagttacagattcaatcaaagatttgagcgtcgacgttaca 12199670  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| |||||||||| | ||| ||  || ||||| |||||||||||||||||||    
T  12199669 gattcggaagcatgagaattttggcgacttagaatttatcatattatttgtag 12199617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 229
Target Start/End: Original strand, 18048887 - 18048991
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||| ||||||| ||||| ||||||||||||||| | |||||||||||| ||||||| ||| ||||||||||| | ||||| |||||||||||||    
T  18048887 tgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagatt 18048986  T
Q  225 caatc 229  Q
    |||||    
T  18048987 caatc 18048991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 116 - 298
Target Start/End: Original strand, 22300844 - 22301026
Alignment:
Q  116 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaa 215  Q
    ||||| || ||||||||||||||||| ||| | ||||||||||||| | ||| |||||||||| | |||| | || | ||||||||||| ||| | ||||    
T  22300844 gtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtcctgttgcggtgtttgtttagctcatcttgaaagatcagctttagtcaa 22300943  T
Q  216 tcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt 298  Q
    ||| |||||||||| ||||||||  || | |||||| ||||||| || |||| ||||| || |||||||||||| || |||||    
T  22300944 tcacagattcaatcgatgatttggacgccgacgttgcagatccgaaatcatgagtattttggtgatttagatttcattatatt 22301026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 47320430 - 47320336
Alignment:
Q  212 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||||| |||||||||||||||||    
T  47320430 tcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattatatcatattatttgtag 47320336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 305
Target Start/End: Complemental strand, 31359852 - 31359671
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    |||||| |||||||||| ||| |||||||| ||||||   |||||||||| ||| | | ||||||| |||| |||||||| ||| | ||||||| |||||    
T  31359852 tgtgttattcgtcgtcttgtgcgacgttgtatgatttcacgtcttgttgcagtgtttgcttggttcctatttaaagatcaactttagtcaatcacagatt 31359753  T
Q  225 caatcaatga-tttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    |||||||  | ||||   |||||||||| |||| | |||||||| ||| |||| ||||||||||||| ||||||||||||||    
T  31359752 caatcaaacaatttggaagtcaacgttgcagattccgaagcatgtgtaatctggtgatttagattttctcatattatttgta 31359671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 52061000 - 52060847
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    |||||||| |||||||||||| |||| ||||||  ||| ||||||||||||| ||||| ||||| | ||||||||||||||||||| ||||  | |||||    
T  52061000 gtttgattatgtgtcttgttgaggtgttcgtttaattcctattgaaagatcaacttcagtcaattacagattcaatcaatgatttgggcgttgatgttgt 52060901  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||  ||||||||| ||||   |||| || || ||||||||||| |||||||    
T  52060900 agatctagaagcatggatatttcaatgactttgaatttatcatattttttgtag 52060847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 54021892 - 54022045
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| ||||||||| |||||| |||||| |||| ||||||||||||  | ||| ||||| | | ||| |||||||||||||   ||||||||||     
T  54021892 gtttgatttcgtgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaaattgaatcaatgatttggatgtcaacgttgc 54021991  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| || ||||| ||||  | ||| |||||||||||||||||||||||||    
T  54021992 agatccgaaaacatggatatttcggtgacttagattttatcatattatttgtag 54022045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 6155340 - 6155147
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||| | |||||||| |||| ||| ||| | ||||||||||||| |||| |||| || ||| ||||||| ||| |||||||||||||  |||| |||    
T  6155340 agtgcggtgttgtgttgt-cgtcatcttgtgcgtcgttgtttgatttcgtgttttgtcgcagtgttcgtttgattcatattgaaagatcagtttcagtca 6155242  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaag---catgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |  ||||||| |||||||   ||| ||||||| |||||||||||   ||| | ||||||| ||||||||||| |||||||||||||||||    
T  6155241 atcacatgttcaatcgatgatttagacgtaaacgttgcagatccggaagcaacatagatattctggtgatttagattctatcatattatttgtag 6155147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 304
Target Start/End: Original strand, 43853446 - 43853626
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaag-at-catcttcac-tcaatcatag 221  Q
    |||||||||| || ||| ||| | ||||||||||||| | || |||||||||||||| |||||||| ||||||||| || | | || |  | |||  |||    
T  43853446 tgtgttgttcatcatcttgtgcggcgttgtttgatttcgcgtattgttgcggtgctcatttggttcatattgaaagcatgcgtattaatgtgaat--tag 43853543  T
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgt 304  Q
    |||  ||||||||||||| ||||||||||| |||| |||||||||| |||||  |||||||||||||||||||||||||||||    
T  43853544 attttatcaatgatttgtacgtcaacgttgcagattcggaagcatgcgtattaagatgatttagattttatcatattatttgt 43853626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 9713916 - 9714095
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||| ||||  ||| |||||||||||||||    | ||||||||| | ||||||  ||| ||||| ||||||| |||||  |||||| | |||    
T  9713916 tgtgttgttcgccgtcatgtgcgacgttgtttgatttcacatattgttgcggagttcgtttctttcatattggaagatcagcttcaaacaatcacaaatt 9714015  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| |||||| |||||||||||| ||||| ||||||  |  ||||||  ||| |||||||||||||||||||||||||    
T  9714016 caatcaacgatttgggcgtcaacgttgcagatctggaagc--gtatattctagtgaattagattttatcatattatttgtag 9714095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 33921040 - 33921239
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc--- 203  Q
    |||||| |||||||||| ||||||||||| |||||  || ||||||   ||||||   ||||||| || ||| |||||| |||| ||||||||||||       
T  33921040 gtcgtctaagtgcggcgttgtgttgttcgccgtcttatgcgacgtt---tgatttcacgtcttgtcgcagtgttcgtttagttcctattgaaagatcgac 33921136  T
Q  204 atcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    ||| ||| | |   | | ||||||||||| ||||| |||||||||||| |||||||||||||||||||||    ||| ||||||||||||||||||||||    
T  33921137 atcgtcaattacaaacaaattcaatcaataatttgagcgtcaacgttgcagatccggaagcatgggtatttcagtgacttagattttatcatattatttg 33921236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 151 - 305
Target Start/End: Complemental strand, 48351265 - 48351111
Alignment:
Q  151 ttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgtt 250  Q
    ||||||||||| | |||||||  ||||| ||||||||||  ||||||||||||| ||||| ||||||| | |||||| | ||||||||  ||||  ||||    
T  48351265 ttgtttgatttcgcgtcttgtcacggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatattcaacctatgatttggacgtccgcgtt 48351166  T
Q  251 gtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    | ||||| ||||||||| |||||  | ||||||||||| |||||| |||||||||    
T  48351165 gcagatctggaagcatgagtattacggtgatttagattgtatcatgttatttgta 48351111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 306
Target Start/End: Complemental strand, 56040759 - 56040570
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| | ||||||||||||||| ||| | ||||   | |||||| ||||||| || ||| | |||| |||| ||||| ||||||  | ||| ||    
T  56040759 aagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---taattttgcgtcttgtcgcagtgtttgtttagttcctattggaagatctacatcagtc 56040663  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| |||||||||| ||| |||||||| |||||| ||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  56040662 aattacaaattcaaccaatgatttgggcggcaacgttgcagatccagaagcatgggtatttcggtgacttaggttttatcatattatttgtag 56040570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 13634104 - 13634300
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| || |||    ||||| | ||||||| |||||| | |||  |||| ||||||||||||  |    
T  13634104 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgaggtta---gatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctac 13634200  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||| ||||||  ||||||||||| |||||||||| ||||||||||    |||||||| ||||||| ||||||||||||    
T  13634201 atcaatcaattacaaattcaagcaacgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgatttaggttttatcttattatttgtag 13634300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 115 - 291
Target Start/End: Complemental strand, 35395785 - 35395619
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| ||||||||||||||||| ||  ||||||||||||| | ||||||||| |||| | ||||||| ||||||||||||||||| ||||         
T  35395785 agtgcggcgttgtgttgttcgtcgtcttgttcgacgttgtttgatctagtgtcttgtcgcggcgttcgtttgtttcttattgaaagatcaacttc----- 35395691  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
         | ||||||| ||| |||||  ||||||||||| | |||| ||| ||||||||||||| || |||||||||||    
T  35395690 -----aaattcaataaattatttgaacgtcaacgttgcaaatccagaaacatgggtattctggtgctttagatttta 35395619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 4142875 - 4142676
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||  ||||||||| |||| |||| |||||| | |||   ||| | ||||||||||  |    
T  4142875 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcggcgtttgatttcgtgttttgtcgcggtgtttgttcaattcctcttgaaagatctac 4142776  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||| ||| |||| |||||  | ||| |||  ||||||||||||||||||||    
T  4142775 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtag 4142676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 2520850 - 2520964
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||  | ||| ||||| | | ||| || ||||||||||  ||||||||||| |||||||||||||||||||||  | ||||||||||||||    
T  2520850 tattgaaagatctacatcaatcaattacaaattaaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttagatttta 2520949  T
Q  292 tcatattatttgtag 306  Q
    || ||||||||||||    
T  2520950 tcgtattatttgtag 2520964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 306
Target Start/End: Complemental strand, 10258974 - 10258820
Alignment:
Q  152 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 251  Q
    |||||||||| | ||||||  |||||| |||||| |||| | ||||||||||  | | | ||||| | | ||||||||||||||||| ||| ||||||||    
T  10258974 tgtttgatttcgcgtcttgacgcggtgttcgtttagttcatgttgaaagatcgacattagtcaattacaaattcaatcaatgatttgggcgccaacgttg 10258875  T
Q  252 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     | | |||||||||||  |||| || ||| |||||||||||||||||||||||||    
T  10258874 catacccggaagcatgaatattttggtgacttagattttatcatattatttgtag 10258820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 19853632 - 19853440
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| |||||||||||||||||  |||| | ||   |||||||| || || |  ||||| | |||  |||| ||||||||||||  |    
T  19853632 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgtggcatt---tgattttgcgttttatcacggtgtttgttcagttcctattgaaagatctac 19853536  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
     ||||||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||| ||||  | ||| |||  ||||||||||||||||    
T  19853535 atcactcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattattt 19853440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 32766503 - 32766699
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||| | ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| |||| |||||||  |    
T  32766503 gtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctac 32766599  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||||||||||||||  |||||| |||| |||||||||| ||||||||||  | ||| |||  ||||||||||||||||||||    
T  32766600 atcagtcaattacaaattcaatcaatgatttggacgtcaatgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtag 32766699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 35348296 - 35348492
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| |||   ||  ||||||||| || |||||||| |||| |||||| |||  ||||||||||||  |    
T  35348296 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg---cggcgtttgatttcgtttcttgttgtggtgttcgtttagttactattgaaagatcggc 35348392  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
       | ||||| | | |||||| ||||||| ||   |||||||||| ||||||||||||||| | |||   |||| |||| ||||||||||||||||||||    
T  35348393 gatagtcaattacaaattcaaccaatgatctggatgtcaacgttgcagatccggaagcatgtgaatttcaatgacttaggttttatcatattatttgtag 35348492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 53444107 - 53444303
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||| || || ||||||||||||||||| |||   || | |||||||| | || |||| |||||| | ||||  ||| ||||||||||||  |    
T  53444107 gtcgtctaagtacgacgttgtgttgttcgtcgtcttgtg---cggtatttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggc 53444203  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||| ||||||| |||| ||||||||||||||| | |||  | ||| |||| ||||||||||||||||||||    
T  53444204 atcagtcaattacaaattcaaccaatgatttgggcgtcaatgttgaagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtag 53444303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 114 - 303
Target Start/End: Original strand, 8670481 - 8670667
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| ||||||||| ||| ||| |||   || |||||||||| | | ||||| |||||| ||||||  ||| ||||||||||||  | ||| ||    
T  8670481 aagtgcggcgttgtgttgttagtcatcttgtg---cggtgtttgatttcgcgacttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtc 8670577  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    ||| | | |||||| |||||||||| |||||||||||| ||||||| ||||||| | |||  | ||| ||||  ||||||||||||||||    
T  8670578 aattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatgtgaatttcggtgacttaggatttatcatattatttg 8670667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 267
Target Start/End: Complemental strand, 56156762 - 56156605
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||| |||| ||||||||||||||||| ||||| |   ||||||||| | ||||||| |||||| |||||| |||| | ||||||||| | |    
T  56156762 gtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgttcgtttagttcctcttgaaagattaac 56156666  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg 267  Q
     ||| ||||| | | |||||| |||||||| | |||||||| ||| ||||| |||||||||    
T  56156665 atcagtcaattacaaattcaaccaatgattggggcgtcaacattgcagatctggaagcatg 56156605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 24099187 - 24098991
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||  | ||||||||||||||| ||| | || |   |||||| | ||||||| |||| | | |||  |||| ||||||||||||  |    
T  24099187 gtcgtctaagtgcggcattttgttgttcgtcgtcttgtgcggcgat---tgatttcgcgtcttgtcgcggagtttgttcagttcctattgaaagatctac 24099091  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||| ||||||||||    ||| |||| ||||||||||||||||||||    
T  24099090 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaaacatgggtatttcagtgacttaggttttatcatattatttgtag 24098991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 148 - 305
Target Start/End: Original strand, 37465510 - 37465666
Alignment:
Q  148 acgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaac 247  Q
    ||||||||||||||   ||||| ||  |||| |||||||||||  |||||||||||||||||  ||||||  | ||||||||||| |||||  | |||||    
T  37465510 acgttgtttgatttcacgtcttcttttggtgttcgtttggttcacattgaaagatcatcttcggtcaatcgcatattcaatcaataatttggacatcaac 37465609  T
Q  248 gttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    |||  ||||||  ||  || | ||||||| ||||||||||||||||||||||||||||    
T  37465610 gttacagatccataaa-atagatattctggtgatttagattttatcatattatttgta 37465666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 192 - 305
Target Start/End: Complemental strand, 38166267 - 38166155
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||| ||| | | |||||||||||||| ||||||||||  | ||||||||| |||||||||  |||| |||||||| ||||||  ||||||    
T  38166267 tattgaaagatcaactt-agttaatcatagattcaagcaatgatttggacatcaacgttgcagatccggagacatgagtattctgttgattttaatttta 38166169  T
Q  292 tcatattatttgta 305  Q
    | ||||||||||||    
T  38166168 taatattatttgta 38166155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 36700377 - 36700457
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    ||||||||||||||||| |||||||||||| | ||| |||||| ||||||||  ||||| ||| |||||||||||||||||    
T  36700377 attcaatcaatgatttgggcgtcaacgttgcaaatctggaagcgtgggtatttcgatgacttaaattttatcatattattt 36700457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 187 - 306
Target Start/End: Original strand, 53811094 - 53811213
Alignment:
Q  187 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 286  Q
    |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||||||||||||| |||||  | ||| |||      
T  53811094 gttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaag 53811193  T
Q  287 ttttatcatattatttgtag 306  Q
    ||||||||||||||||||||    
T  53811194 ttttatcatattatttgtag 53811213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 4937861 - 4937958
Alignment:
Q  149 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaa 246  Q
    ||||||||||||||   ||||||||||| | ||||||| || |||||||||||||| ||||| || || ||| ||||||||||||||||  |||||||    
T  4937861 cgttgtttgattttacatcttgttgcggagttcgtttgatttttattgaaagatcaacttcagtcgattataaattcaatcaatgatttaggcgtcaa 4937958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 52934059 - 52933873
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttgg-ttcttattgaaagatcatcttcactc 213  Q
    ||||||||| ||||||||||||| | | |||   ||||||||||||| |  |||||||||||||||  ||| | ||| ||||||||||||| ||||| ||    
T  52934059 agtgcggcgttgtgttgttcgtcattttgtgcagcgttgtttgatttcgcatcttgttgcggtgcttattttgattcatattgaaagatcagcttcaatc 52933960  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     |||| ||||||||||||| |||||  || |||| ||  ||||| ||      |  |||| || |||||||||||||||||||||||||||||    
T  52933959 gatcaaagattcaatcaataatttggacgacaacatttcagatctgg------gaatattatggtgatttagattttatcatattatttgtag 52933873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 206 - 298
Target Start/End: Complemental strand, 9145914 - 9145823
Alignment:
Q  206 cttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt 298  Q
    ||||| ||||||| || |||||||||||||||   | |||||||| || ||||||||||||| |||||||| ||||||||||| |||||||||    
T  9145914 cttcagtcaatcagag-ttcaatcaatgatttagacatcaacgttatatatccggaagcatgagtattctggtgatttagattgtatcatatt 9145823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 45418613 - 45418697
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||| || ||||||||| ||||||| |||||   |||||  | ||| |||||||||||||||||||||||||    
T  45418613 attcaatcaatgatttgggcatcaacgttgcagatccgaaagcactagtatttcggtgacttagattttatcatattatttgtag 45418697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 182 - 305
Target Start/End: Original strand, 47158286 - 47158409
Alignment:
Q  182 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaac-gttgtagatccggaagcatgggtattctgatga 280  Q
    |||||| |||||||||||||| | |||||  |||||| |||||||||||||||||||  ||||| |  ||| ||||| | ||| ||| |||||||| |||    
T  47158286 gtttggatcttattgaaagattaacttcagacaatcacagattcaatcaatgatttggccgtcatcatttgcagatctgaaagtatgagtattctgctga 47158385  T
Q  281 tttagattttatcatattatttgta 305  Q
    ||||||| ||||||| |||||||||    
T  47158386 tttagatattatcat-ttatttgta 47158409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 186
Target Start/End: Complemental strand, 52204433 - 52204375
Alignment:
Q  128 gttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttg 186  Q
    |||||||||||||| ||||||| ||||||||||||| |||||||| ||||| |||||||    
T  52204433 gttgttcgtcgtcttgtgtgacattgtttgattttgcgtcttgttacggtgttcgtttg 52204375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 306
Target Start/End: Original strand, 37030262 - 37030446
Alignment:
Q  119 cggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 218  Q
    ||||| ||||||||||||||||| || || ||||   ||||||  |||||||| ||||||  |||||||||  |||  |||||||| ||||| ||||  |    
T  37030262 cggcgttgtgttgttcgtcgtcttgtatggcgtt---tgatttcatgtcttgtcgcggtgtacgtttggtttctatcaaaagatcaacttcaatcaaata 37030358  T
Q  219 tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     |||||||||||||||||||  | || |||||| |||||   || ||||||||||    ||| |||||  ||||||||||||||||||    
T  37030359 cagattcaatcaatgatttggacatcgacgttgcagatcgaaaaacatgggtatttcagtgacttagaaattatcatattatttgtag 37030446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 21554798 - 21554714
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||||  ||||||  ||||||||||  ||| ||| |||||||||| ||||  |||||||| ||||||||||||    
T  21554798 attcaatcaatgatttgaacgtcaatattgtagatccaaaaggatgagtattctgatcattttaattttatcttattatttgtag 21554714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 182 - 306
Target Start/End: Complemental strand, 29960997 - 29960873
Alignment:
Q  182 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgat 281  Q
    |||| |||| ||||||||||||  | ||| ||||| ||| |||||| | |||||||  || ||||||||| |||||||||| |||   |||| |  ||||    
T  29960997 gtttagttcgtattgaaagatctacatcaatcaattataaattcaaccgatgattttggcatcaacgttgcagatccggaaacataaatattttagtgat 29960898  T
Q  282 ttagattttatcatattatttgtag 306  Q
    ||||||||||||||| |||||||||    
T  29960897 ttagattttatcatactatttgtag 29960873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 37683884 - 37683972
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcg-tttggttcttattgaaagat 202  Q
    ||||||||| |||||||||| |||||| ||||   |||||||||||| | |||||||||||||| ||| |||||||  |||||||||||    
T  37683884 agtgcggcgttgtgttgttcatcgtcttgtgtagagttgtttgatttcgcgtcttgttgcggtgttcgttttggtttctattgaaagat 37683972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 42032546 - 42032453
Alignment:
Q  212 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| | ||||||| ||||||||| | | |||||||| |||||| |||||||| ||||  || |||||||||| ||||||||||||| ||||    
T  42032546 tcaatcacatattcaataaatgatttgggtgccaacgttgaagatccagaagcatgagtatcttg-tgatttagatgttatcatattattggtag 42032453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 868180 - 868257
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 204  Q
    ||||||||||||||| ||| | |||||||||||||   ||||| |||||||| || |||| ||| |||||||||||||    
T  868180 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatca 868257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 265
Target Start/End: Original strand, 9178349 - 9178497
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    ||||||| || ||| ||||||||| ||| ||||| ||||   |||||| | ||||||| ||| || |||||| |||| ||||||||||||  | ||| ||    
T  9178349 aagtgcgacgttgtattgttcgtcatcttgtgtggcgtt---tgatttcgcgtcttgtcgcgttgttcgtttagttcctattgaaagatcgacatcaatc 9178445  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagca 265  Q
    ||| | | || |||||||| ||||| || ||||||||| ||||| |||||||    
T  9178446 aattacaaatccaatcaataatttgagcatcaacgttgcagatctggaagca 9178497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 10389825 - 10389753
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaa 199  Q
    ||||||||||||||| ||| | ||||||||||||||  ||||| |||||||| || |||| ||| ||||||||    
T  10389825 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcttgcggtgttcatttgattcatattgaaa 10389753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 174 - 303
Target Start/End: Complemental strand, 26090970 - 26090837
Alignment:
Q  174 cggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtatt 273  Q
    ||||| |||||| |||| | ||||||||||  | ||| ||||| ||| ||||||  ||||||||| |||||||||||| | || ||||||||| ||||||    
T  26090970 cggtgttcgtttagttcatcttgaaagatcgacatcagtcaattataaattcaactaatgatttgggcgtcaacgttgcaaattcggaagcattggtatt 26090871  T
Q  274 ctgatgatttag----attttatcatattatttg 303  Q
      | ||| ||||    ||||||||||||||||||    
T  26090870 tcggtgacttagatatattttatcatattatttg 26090837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 306
Target Start/End: Complemental strand, 29120375 - 29120303
Alignment:
Q  234 atttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||||| ||| ||||| ||||||||| |||||  | | | |||||||||||||||||||||||||    
T  29120375 atttgggcgtcaacattgcagatctggaagcatgagtatttcggtaacttagattttatcatattatttgtag 29120303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 34024508 - 34024433
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| || |||||||||||||||||   |||| |||||||| || |||| ||| ||||||||||||    
T  34024508 tgttgttcgtcgtcttgtatgacgttgtttgattttccatcttcttgcggtgttc-tttgattcatattgaaagatc 34024433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 43154085 - 43154009
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||||| |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  43154085 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 43154009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 306
Target Start/End: Original strand, 43510305 - 43510381
Alignment:
Q  230 aatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||  |||||| |||| |||||| ||||||||||||||  | ||| |||  ||||||||||||||||||||    
T  43510305 aatgatttggacgtcaatgttgcagatcctgaagcatgggtatttcggtgacttaagttttatcatattatttgtag 43510381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 3336230 - 3336152
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtg-acgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||||||||||  ||| | |||||||||||||||   ||||||||||||| || |||| ||| |||||||||||    
T  3336230 tgtgttgttcgtcgtcctgtgcggacgttgtttgattttccatcttgttgcggtgttcatttgattcatattgaaagat 3336152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 5119371 - 5119421
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||||| | |||||| |||||| |||| ||||||||||||    
T  5119371 gtttgattttgtgtcttatcgcggtgttcgtttagttcctattgaaagatc 5119421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 12265553 - 12265599
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgg 268  Q
    |||||||||| |||||| |||||||||||| ||||||||| ||||||    
T  12265553 attcaatcaaagatttgagcgtcaacgttgcagatccggaggcatgg 12265599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 18138986 - 18138908
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||||| ||| | ||||||||||||||   ||||||||| ||| || |||| ||  ||||||||||||    
T  18138986 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 18138908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 150 - 204
Target Start/End: Complemental strand, 28834295 - 28834241
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 204  Q
    ||||||||||||| ||||||||||||    |||||||||||||||||||| ||||    
T  28834295 gttgtttgattttctgtcttgttgcgaaattcgtttggttcttattgaaacatca 28834241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 49126199 - 49126121
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||||| ||| | ||||||||||||||   ||||||||| ||| || |||| ||  ||||||||||||    
T  49126199 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccatcttgttgcagtgttcatttgatttctattgaaagatc 49126121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 2624512 - 2624589
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||||||||||| ||| | ||| |||||||||   |||||||||||||| |  |||| ||| |||||||||||    
T  2624512 tgtgttgttcgtcgtcttgtgcggcgtagtttgatttcccgtcttgttgcggtgtttatttgattcatattgaaagat 2624589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 269 - 306
Target Start/End: Complemental strand, 22305582 - 22305545
Alignment:
Q  269 gtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||| |||||||||||||||||||||||||    
T  22305582 gtattttgatgacttagattttatcatattatttgtag 22305545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 255
Target Start/End: Original strand, 22806571 - 22806676
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 249  Q
    |||||| |||| ||||  |||||| |||| || |||||||| | |||||| |||   |||| ||||| |||||||||||||||||||||  | |||| ||    
T  22806571 gttgttcgattgtgtggtttgttgtggtgttcttttggttccttttgaaatatcggattcaatcaattatagattcaatcaatgatttggacatcaatgt 22806670  T
Q  250 tgtaga 255  Q
    ||||||    
T  22806671 tgtaga 22806676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 172
Target Start/End: Complemental strand, 43353629 - 43353584
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgtt 172  Q
    ||||||||||||||| ||||| |||||||||||||| | |||||||    
T  43353629 tgttgttcgtcgtcttgtgtgtcgttgtttgattttttatcttgtt 43353584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 44596780 - 44596845
Alignment:
Q  241 cgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||  ||| || || ||| ||||||  ||||||||| |||||||||||||||||||||    
T  44596780 cgtcaacgttgctgattcgaaaacataggtatttcgatgatttacattttatcatattatttgtag 44596845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Complemental strand, 53616721 - 53616644
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 204  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| |||||||||||||    
T  53616721 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 53616644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 4643876 - 4643952
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  4643876 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 4643952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 9283929 - 9284005
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||| ||||||| ||||| |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  9283929 tgttgtttgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9284005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 10389744 - 10389668
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 297  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||| ||| | ||  ||||||||||||    
T  10389744 attcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccgatcactttaattttatcatat 10389668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 25273901 - 25273977
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  25273901 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 25273977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 34024428 - 34024352
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 297  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||| | | ||||  ||||||||||||    
T  34024428 attcaatcaacgatttgagcgtcaacgttgcagatccggaggccatggatattccggtcattttaattttatcatat 34024352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 306
Target Start/End: Original strand, 43095733 - 43095813
Alignment:
Q  226 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||  |||||||  || ||||||||||||||| | |||    ||| |||||||||||||||| ||||||||    
T  43095733 aatcaatgatttggccgtcaacagtgcagatccggaagcatgagaatttcactgacttagattttatcatatcatttgtag 43095813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 43444411 - 43444487
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | ||||||||||||||  ||||   ||||||| || |||| ||| ||||||||||||    
T  43444411 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtctacgtgcggtgttcatttgattcatattgaaagatc 43444487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 47417680 - 47417756
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  47417680 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 47417756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 1e-47; HSPs: 89)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 115 - 302
Target Start/End: Original strand, 10929648 - 10929836
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgttt-gattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    ||||||| | ||||||||||||||||| ||  |||||||||| ||||| | |||||||||||||| ||||||||||| | |||||| |||| ||||| ||    
T  10929648 agtgcggtgttgtgttgttcgtcgtcttgtacgacgttgttttgatttagcgtcttgttgcggtgttcgtttggttcatgttgaaaaatcagcttcagtc 10929747  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    ||||| |||||||||||||||||||  | ||||||||| ||||||||||||||| |||||||| ||||||| |||||||||||||||||    
T  10929748 aatcacagattcaatcaatgatttggacatcaacgttgcagatccggaagcatgtgtattctggtgatttaaattttatcatattattt 10929836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 32448742 - 32448541
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||||| |  ||||||||||||||||| ||| | ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| |    
T  32448742 gtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgcgccgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaagatcagc 32448644  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttag---attttatcatattatttg 303  Q
    |||| ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||| | |||||||| ||||||||   ||| ||||||||||||||    
T  32448643 ttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctggtgatttagattattatatcatattatttg 32448544  T
Q  304 tag 306  Q
    |||    
T  32448543 tag 32448541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 172 - 306
Target Start/End: Original strand, 14955570 - 14955704
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||||||| |||||||| ||||||||||   ||||||| ||||||||||||||||| |||||||||||| |||||| ||| |||| |||    
T  14955570 tgcggtgttcgtttggttcatattgaaatatcatcttcagataatcataaattcaatcaatgatttgagcgtcaacgttgcagatccagaaacatgtgta 14955669  T
Q  272 ttctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||||||||||||||||||||||    
T  14955670 ttctgatgatttagattttatcatattatttgtag 14955704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 150 - 306
Target Start/End: Complemental strand, 23933700 - 23933544
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 249  Q
    ||||||||| ||||  ||||||||||||| ||||||||||||||||||||| ||| ||||| ||||||| ||||||||||||| |||||  |||||||||    
T  23933700 gttgtttgaatttgcatcttgttgcggtgttcgtttggttcttattgaaagttcaacttcagtcaatcacagattcaatcaattatttggacgtcaacgt 23933601  T
Q  250 tgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |  | ||| |||||||||| || |||| |||||||||||||||||||||||||||||    
T  23933600 tacatatctggaagcatggataatctggtgatttagattttatcatattatttgtag 23933544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 29574752 - 29574553
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    ||||||| ||||||||| ||||||||||||||||| ||| | | |||||||||||    | ||||||| ||| | ||||| ||| ||||||||||| | |    
T  29574752 gtcgtccgagtgcggcgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcacattttgttgcagtgtttgtttgattcatattgaaagattagc 29574653  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| ||||||| |||||||||||||||||||  || |||||||| |||||||||||||||  |||| ||||||||||||||| |||||||| |||||||    
T  29574652 ttcagtcaatcacagattcaatcaatgatttggacgccaacgttgcagatccggaagcatgaatattatgatgatttagatttcatcatattttttgtag 29574553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 10237267 - 10237141
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    ||||||||||| ||||||||||||| |||||  |||||| | |||||||||||||||||  ||||||||||| |||||| ||||||||||||||||||||    
T  10237267 tcgtttggttcgtattgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctgatg 10237168  T
Q  280 atttagattttatcatattatttgtag 306  Q
    |||||||||| ||||||||||||||||    
T  10237167 atttagatttcatcatattatttgtag 10237141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 4904266 - 4904070
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||| |||| ||||||||||||||||| ||| ||||||   ||||||||||||||||||||||| ||||||||||| ||||||||||||  |    
T  4904266 gtcgtcaaagtgtggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgattttgtgtcttgttgcggtgttcgtttggttcatattgaaagatcgac 4904170  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | ||||||   |||||||| | |||||||||| |||||| ||||||||| ||||  | ||| |||||||||||||||||||||||||    
T  4904169 atcagtcaattacaaattcaactgatgatttgggtgtcaacgttgcagatccagaagcatggatatttcggtgacttagattttatcatattatttgtag 4904070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 17249252 - 17249072
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | ||| |||| |||| |  ||||||||||||| | ||| ||||| |||||||||||||  |||| ||||||| |||||    
T  17249252 tgtgttgttcgtcgtcttgtgcggcgtagttttatttggcatcttgttgcggtgtttgtt-ggttcatattgaaagatcagtttcagtcaatcacagatt 17249154  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||  ||||||||||| ||||||  ||||| | |||||||| ||||||||||| |||||||||||||||||    
T  17249153 caatcaatgatttggacgtcaacgttgcagatccataagcaagagtattctggtgatttagattatatcatattatttgtag 17249072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 24461416 - 24461618
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgatt---ttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||| ||||  ||| |||||||||||| || | ||| | ||||||||||||   ||| | |||||||||||| ||||||||||| ||||||||||||    
T  24461416 gtcgtccgagtgttgcgttgtgttgttcgttgttttgtgcggcgttgtttgattattttgcgccttgttgcggtgttcgtttggttcatattgaaagatc 24461515  T
Q  204 atcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    | ||||| |||| || |||||||||| ||||||||  || |||||||| ||||||||||||||  ||||| || |||||||||||| |||||||| ||||    
T  24461516 aacttcagtcaaccacagattcaatcgatgatttggacgccaacgttgcagatccggaagcattagtattttggtgatttagatttcatcatattttttg 24461615  T
Q  304 tag 306  Q
    |||    
T  24461616 tag 24461618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 25509146 - 25508993
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||||||||||||| |||||| |||||| ||||  |||||||||||| | ||| ||||| | | |||||||||||||| || ||||||||||||     
T  25509146 gtttgattttgtgtcttgtcgcggtgttcgtttagttcccattgaaagatcaacatcagtcaattacaaattcaatcaatgatctgggcgtcaacgttgc 25509047  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    | |||||||| ||||||||||  ||||| |||||||||||| ||||||||||||    
T  25509046 aaatccggaaacatgggtatttcgatgacttagattttatcgtattatttgtag 25508993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 159 - 306
Target Start/End: Complemental strand, 19595975 - 19595828
Alignment:
Q  159 ttttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatcc 258  Q
    ||||||||||||||||| || | |||| |||||||||||||||||| ||| | ||||||||| ||||||| ||||||||| |||||||  |||  ||||     
T  19595975 ttttgtgtcttgttgcgatgtttgtttagttcttattgaaagatcagctttaatcaatcataaattcaataaatgatttgggcgtcaaaattgccgatct 19595876  T
Q  259 ggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||  |||| ||||||||| ||||||||||||||||||||||    
T  19595875 ggaagcatgaatattttgatgattttgattttatcatattatttgtag 19595828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 306
Target Start/End: Original strand, 3308986 - 3309120
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||||||  |||||||| |||| |||||  |||||| | ||||||||||||||||| |||| ||||||| |||||| ||||||||||||    
T  3308986 tgcggtgttcgtttggtttgtattgaaatatcaacttcagacaatcacaaattcaatcaatgatttgggcgttaacgttgcagatccagaagcatgggta 3309085  T
Q  272 ttctgatgatttagattttatcatattatttgtag 306  Q
    ||||| ||||||| |||| ||||||||||||||||    
T  3309086 ttctggtgatttatatttcatcatattatttgtag 3309120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 28534060 - 28533879
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||| ||||| ||| |||||||||||||||    ||||||||||||| ||||||| ||| ||||||||||  | ||||||||||||| |||||    
T  28534060 tgtgttgttcgccgtcttgtgcgacgttgtttgatttcaaatcttgttgcggtgttcgtttgattcctattgaaagacaagcttcactcaatcacagatt 28533961  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||||||  ||||||| ||| | |||  ||| ||| | ||||| | |||||| ||||||||||||||||||||||    
T  28533960 caataaatgatttggacgtcaactttgcaaatctagaaacattgatattcgggtgatttggattttatcatattatttgtag 28533879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 37416686 - 37416885
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||| | | ||||||||||||||||| ||| |||||||||||||||    ||||||||   || ||| ||||||| |||||||| |||| |    
T  37416686 gtcgtctaagtgccgtgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcacatcttgttgtaatgttcggttggttcatattgaaatatcaac 37416785  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |  | ||||||| |||||||||||||||||||   |||||| ||| ||  ||||||||||| |||||||  ||||||| |||||||||||||||||||||    
T  37416786 tcgagtcaatcacagattcaatcaatgatttggatgtcaacattgcaggcccggaagcatgtgtattctagtgatttatattttatcatattatttgtag 37416885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 17151445 - 17151599
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| |  ||||||| ||||| ||||||| ||| |||||||||||||  |||| ||||| | ||||||||||||||||||| ||||| |||||||    
T  17151445 gtttgatttcgcatcttgttacggtgttcgtttgattcctattgaaagatcaatttcagtcaattacagattcaatcaatgatttgggcgtcgacgttgt 17151544  T
Q  253 agatccggaagca-tgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||| ||||||||  | ||| || || |||||||||||||| ||||    
T  17151545 agatccggaagcattgggtatttcggtgacttggaatttatcatattattagtag 17151599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 306
Target Start/End: Original strand, 4264472 - 4264647
Alignment:
Q  128 gttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaa 227  Q
    |||||||||||||| |||   || |||||||||| | ||||| |||||||| || |||||||||||||||||||||| ||||| ||||| | ||||| ||    
T  4264472 gttgttcgtcgtcttgtg---cggtgtttgatttcgcgtcttattgcggtgttcatttggttcttattgaaagatcaacttcagtcaattacagatttaa 4264568  T
Q  228 tcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||  | ||||| |||  | ||| |||||||||||||||  ||||| ||  | |||||||||||||||||||    
T  4264569 tcaatgatttaggagtcaatgttccaaatctggaagcatgggtatttcgatgacttcaaatttatcatattatttgtag 4264647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 107 - 303
Target Start/End: Complemental strand, 5427989 - 5427797
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    ||||||||||||||||| | ||||||||||||||| ||||| ||||   |||||| | ||||||| |||||| | |||| |||| ||||| ||||||  |    
T  5427989 gtcgtccaagtgcggcgttttgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcatattggaagatctac 5427893  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
     ||| ||||| | | |||||| |||||| |||||||||||||||| ||||||||||| ||| |||||    ||| |||| |||||||||||||||||    
T  5427892 atcagtcaat-acaaattcaaccaatgacttgtgcgtcaacgttgcagatccggaagtatgtgtatttcagtgacttaggttttatcatattatttg 5427797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 152 - 306
Target Start/End: Original strand, 16375960 - 16376114
Alignment:
Q  152 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 251  Q
    ||||||||||  |||| |||||||||  ||||||||||| |||||||||| ||    || ||| ||| ||||||||||||||||||  ||||||| ||||    
T  16375960 tgtttgatttcatgtcctgttgcggtattcgtttggttcctattgaaagaccaaaaccagtcagtcacagattcaatcaatgatttcggcgtcaaagttg 16376059  T
Q  252 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     |||| |  ||||||| ||||| |||||||||| |||||||||||||||||||||    
T  16376060 cagattcaaaagcatgtgtattatgatgatttaaattttatcatattatttgtag 16376114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 154 - 306
Target Start/End: Complemental strand, 30400112 - 30399954
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    ||||||||||  || ||| |||||| |||||| |||| ||||||||||||| ||||| ||||| | | ||||||||||||||||| |||||||||||| |    
T  30400112 tttgattttgcatcgtgtcgcggtgttcgtttagttcctattgaaagatcaacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgca 30400013  T
Q  254 gatccggaagcatgggtattctga-------tgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||| ||||| |||       ||| |||||||||||||||||||||||||    
T  30400012 gatccgaaagcatgagtatt-tgatttttagtgacttagattttatcatattatttgtag 30399954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 302
Target Start/End: Complemental strand, 34128788 - 34128613
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattca 226  Q
    ||||||||||||||| ||| |||||||||||||| || ||||||||| |||| | ||||||||| |||| |||||||  ||| | || || ||| |||||    
T  34128788 tgttgttcgtcgtcttgtgcgacgttgtttgattgtgcgtcttgttgtggtgtttgtttggttcctattaaaagatcgactttagtcgattataaattca 34128689  T
Q  227 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||||| ||||| ||||||| |||| | ||| | || | ||||||||  ||| | || ||||||||||||||||||    
T  34128688 atcaattatttgggcgtcaatgttgcatatctgaaatcttgggtatttcgattacttggattttatcatattattt 34128613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 1421737 - 1421851
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | |||||||| |||||    
T  1421737 tattgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgatttaggtttta 1421836  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  1421837 tcatattatttgtag 1421851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 130 - 306
Target Start/End: Original strand, 6436609 - 6436782
Alignment:
Q  130 tgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatc 229  Q
    |||||||||||| ||| ||||||   ||||||||  ||||||| ||||| |||| |||||| || |||||||||| ||||| ||||||| | ||||||||    
T  6436609 tgttcgtcgtcttgtgcgacgtt---tgattttgcatcttgttacggtgttcgtctggttcataatgaaagatcagcttcagtcaatcaaatattcaatc 6436705  T
Q  230 aatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||  |||||| |||  |||||| ||| |||| ||| |||  || |||| |||||||||||||| ||||||    
T  6436706 aatgatttggacgtcaatgttacagatcctgaaacatgagtaatctagtggtttaaattttatcatattacttgtag 6436782  T

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Target: chr2; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 37876727 - 37876531
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||||||||||| ||| | | ||   |||||| | ||||||| |||||| | |||| |||| ||||| ||||||  |    
T  37876727 gtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcatt---tgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaagatctac 37876631  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||| ||| || ||||||||| ||||||| |||||||||||||  | ||| ||| |||||||||||||||||||||    
T  37876630 atcagtcaattacaaattcaaccaatgacttgggcatcaacgttgcagatccgaaagcatgggtatttcggtgacttaaattttatcatattatttgtag 37876531  T

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Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 306
Target Start/End: Original strand, 18763448 - 18763643
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||| | ||||||||||||||||| ||| | ||||   |||||| | ||||| |  ||||| |||||| |||| ||||||||||||  |     
T  18763448 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttatcacggtgttcgtttagttcctattgaaagatcggca 18763544  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||| | | |||||| |||| ||||| |||||||||||  ||||||||||||||| | |||  | ||| |||| ||||||||||||||||||||    
T  18763545 tcaatcaattacaaattcaaccaatcatttgggcgtcaacgttacagatccggaagcatgtgaatttcggtgacttaggttttatcatattatttgtag 18763643  T

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Target: chr2; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 37994263 - 37994459
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| ||||||||||||| ||  ||  | | |||||||||||||  ||||||||| ||| || |||| ||| |||||||| |||| ||||| |||    
T  37994263 agtgcggcgttgtgttgttcgtcttcctgtacggcattgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagcttcagtca 37994362  T
Q  215 atcatag-----attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |      ||||||| |||||||||  ||||| ||||| ||||||||||| | |  ||||| | |||||||||||||||||||||||||||||    
T  37994363 atcacatcacaaattcaatgaatgatttggacgtcagcgttgcagatccggaagaaagaatattccggtgatttagattttatcatattatttgtag 37994459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 117 - 306
Target Start/End: Complemental strand, 31128891 - 31128705
Alignment:
Q  117 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaat 216  Q
    ||||||| ||||||||| ||||||| ||||| ||||   |||||  |  |||||| |||||| |||||| |||| |||||||| |||    ||| |||||    
T  31128891 tgcggcgttgtgttgttagtcgtcttgtgtggcgtt---tgattccgcttcttgtcgcggtgttcgtttagttcctattgaaaaatcgatatcagtcaat 31128795  T
Q  217 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     | | ||||||||||||||||  |||||||||||| ||||||||||||||| |||||    ||| ||| |||||||||||||||||||||    
T  31128794 tacaaattcaatcaatgatttaggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatattttatcatattatttgtag 31128705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 180 - 289
Target Start/End: Complemental strand, 12647160 - 12647051
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    |||||| |||| ||||||||||||| ||||| ||||||| |||||||||| || |||||  || ||| ||||||||||||||||||||  |||| || ||    
T  12647160 tcgttttgttcatattgaaagatcagcttcagtcaatcacagattcaatcgatcatttggacgccaatgttgtagatccggaagcatgaatattttggtg 12647061  T
Q  280 atttagattt 289  Q
    ||||||||||    
T  12647060 atttagattt 12647051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 31210728 - 31210532
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||| || |||| ||| | ||||   |||||| | ||||| | | |||| | |||  |||| ||||||||||||  |    
T  31210728 gtcgtctaagtgcggcgttgtgttgtttgttgtcttgtgcggcgtt---tgatttcgcgtcttatcgtggtgtttgttcagttcctattgaaagatctac 31210632  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||| | |||||||||||||  | |||||||| ||||||||||||||||||||    
T  31210631 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatcagaaagcatgggtatttcggtgatttaggttttatcatattatttgtag 31210532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 306
Target Start/End: Complemental strand, 33760259 - 33760118
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 264  Q
    |||||||||| ||| ||||||| ||| ||||||||||||| ||||| ||||| ||||| ||||||||||||||| ||||| | |||| ||||||  || |    
T  33760259 gtcttgttgcagtgttcgtttgattcatattgaaagatcaacttcagtcaattatagactcaatcaatgatttgagcgtcgatgttgcagatccataaac 33760160  T
Q  265 atgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| |||||    ||| |||||  ||||||||||||||||||    
T  33760159 atgtgtatttcagtgacttagaacttatcatattatttgtag 33760118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 36943242 - 36943046
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||| ||||  |||||||||||  |    
T  36943242 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtattgtcgcggtgtttgtttagttccaattgaaagatctac 36943146  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     | | || || | | |||| | |||||||||| |||||||||||| |||||||||| ||||||||||  | ||| ||  |||||||||||||||||||||    
T  36943145 attagtcgattacaaattccaccaatgatttgggcgtcaacgttgcagatccggaaacatgggtatttcggtgacttgaattttatcatattatttgtag 36943046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 306
Target Start/End: Complemental strand, 19028991 - 19028839
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||| | |||||||  ||||| || ||| |||| ||||||||||||  ||||| ||||  | | ||||||||||||||||| |||||||||||| |    
T  19028991 tttgatttcgcgtcttgtctcggtgttcatttagttcctattgaaagatcgacttcagtcaagtacaaattcaatcaatgatttgagcgtcaacgttgca 19028892  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     |||| ||||||||| ||||  | | | ||||||||||||||| |||||||||    
T  19028891 aatccagaagcatggatatttcggtaacttagattttatcatactatttgtag 19028839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 153 - 256
Target Start/End: Complemental strand, 28871866 - 28871763
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | ||||||| |||||| ||||||||||| ||||||||||||| ||||| ||||| | |||||||| |||||||||  ||||| ||||||     
T  28871866 gtttgatttcgcgtcttgtcgcggtgttcgtttggttcctattgaaagatcaacttcagtcaattacagattcaaccaatgatttaggcgtcgacgttgc 28871767  T
Q  253 agat 256  Q
    ||||    
T  28871766 agat 28871763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 184 - 302
Target Start/End: Original strand, 41694674 - 41694792
Alignment:
Q  184 ttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgattt 283  Q
    ||||||| | ||||||||||| |||||  |||| | | ||||||||||||||||| || ||||||||| |||| | ||||||||   |||||| ||| ||    
T  41694674 ttggttcctgttgaaagatcagcttcagccaattacatattcaatcaatgatttgggcatcaacgttgcagatgcagaagcatgtagattctggtgactt 41694773  T
Q  284 agattttatcatattattt 302  Q
    |||||||||||||||||||    
T  41694774 agattttatcatattattt 41694792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 1415579 - 1415732
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | || |||| |||||| | ||||  ||| ||||||||||||  | ||| ||||| | | |||||| |||||||||| ||||||||||||     
T  1415579 gtttgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttga 1415678  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||| | |||  | ||| |||| |||||||| |||||||||||    
T  1415679 agatccggaagcatgtgaatttcggtgacttaggttttatcagattatttgtag 1415732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 125 - 251
Target Start/End: Complemental strand, 6358979 - 6358851
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactcaatcataga 222  Q
    ||||||||||||||||| |||   ||||||||||||| |  ||||||||  ||||| | ||||||||||||||||||||||| |||||  || ||| | |    
T  6358979 tgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgcatcttgttgtacggtgtttgtttggttcttattgaaagatcaacttcagacagtcacaaa 6358880  T
Q  223 ttcaatcaatgatttgtgcgtcaacgttg 251  Q
    ||||||| || ||||| ||||||||||||    
T  6358879 ttcaatctataatttgggcgtcaacgttg 6358851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 7677994 - 7677802
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||| |  ||||| | |||  |||| ||||||||||||  |    
T  7677994 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttatctcggtgtttgttcagttcctattgaaagatctac 7677898  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
     ||| ||||| | | |||||| ||||||||||  | ||||||||| ||||||| |||||||||||||    ||| |||| ||||||||||||||||    
T  7677897 atcaatcaattacaaattcaagcaatgatttggacatcaacgttgcagatccgaaagcatgggtatttccgtgaattaggttttatcatattattt 7677802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 171 - 300
Target Start/End: Original strand, 14423365 - 14423494
Alignment:
Q  171 ttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggt 270  Q
    |||||||| | ||||||||||||||||||||||  ||| | ||||| | ||||| |||||||||||||  ||||||||||| | |||  ||| |||||||    
T  14423365 ttgcggtgtttgtttggttcttattgaaagatcgactttagtcaattacagatttaatcaatgatttggacgtcaacgttgcaaatctagaaacatgggt 14423464  T
Q  271 attctgatgatttagattttatcatattat 300  Q
    |||  | | | |||||||||||||||||||    
T  14423465 atttaggttagttagattttatcatattat 14423494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 232
Target Start/End: Original strand, 19597855 - 19597980
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||||||||||  |  ||||||||||||||| | ||||   |||||||||||||||||||||||| | || ||||||| |||||||||||||| || |    
T  19597855 gtcgtccaagtgcaacattgtgttgttcgtcgtattgtgtcgtgttgtttgattttgtgtcttgttgtgatgttcgtttgattcttattgaaagaccaac 19597954  T
Q  207 ttcactcaatcatagattcaatcaat 232  Q
    |||| | ||||| | ||| |||||||    
T  19597955 ttcagttaatcacaaatttaatcaat 19597980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 156 - 301
Target Start/End: Complemental strand, 29173794 - 29173650
Alignment:
Q  156 tgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtaga 255  Q
    |||||||| ||||| | || ||| |||||| |||| ||||||||| ||  | ||| ||||| | | ||||||||||| ||||| | |||||||||| |||    
T  29173794 tgattttgcgtcttatcgcagtgttcgtttagttcctattgaaagctcgacatca-tcaattacaaattcaatcaattatttgggtgtcaacgttgcaga 29173696  T
Q  256 tccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
    |||| |||||||||||||  | ||| ||||||||||||||||||||    
T  29173695 tccgaaagcatgggtatttcggtgacttagattttatcatattatt 29173650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 38445145 - 38445341
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||| ||| ||||||||||||||||| ||| | ||||   |||||| | || || | |||||| | |||  |||| ||||||||||||  |    
T  38445145 gtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttatcgcggtgtttgttcagttcctattgaaagatctac 38445241  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| | ||| | | |||||| ||||||||||  ||||||||||| |||||||||||| ||||||||  | ||| |||  ||||||||||||||||||||    
T  38445242 atcagtaaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcgtgggtatttcggtgacttaagttttatcatattatttgtag 38445341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 4778844 - 4778928
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  ||||||||||||||||||||    
T  4778844 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtag 4778928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 158 - 238
Target Start/End: Complemental strand, 12554254 - 12554174
Alignment:
Q  158 attttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttg 238  Q
    ||||||||||| ||||||||| ||||||| ||| |||||||| |||| ||||| ||||| | |||||||||||||||||||    
T  12554254 attttgtgtctagttgcggtgttcgtttgattcatattgaaatatcaacttcagtcaattacagattcaatcaatgatttg 12554174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 29279579 - 29279495
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||||||||||| |||| |||||||||| |||| || ||  | ||| ||| |||||||||||||||||||||    
T  29279579 attcaatcaatgatttgtgcgtcaatgttgcagatccggaaacatgagtttttcggtgacttaaattttatcatattatttgtag 29279495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 222 - 301
Target Start/End: Complemental strand, 12677459 - 12677380
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
    |||||| |||||||||| |||||||||||| ||||||||||||||| | ||| || ||| |||| |||||||||||||||    
T  12677459 attcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggttttatcatattatt 12677380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 18107825 - 18107675
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | ||| || ||||||| ||||||||||| |||||| |||| | | ||||||||||| ||||||||| ||  |||| ||||||||   |      
T  18107825 gtttgatttcgcgtcatgctgcggtgttcgtttggttcatattgagagataaacctcactcaatcacagattcaattaacaatttatgcgtcaa---tac 18107729  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| |||||||| |||||  ||||| ||||| || ||||||||||||||||    
T  18107728 agatccagaagcatgtgtatttcgatgacttagaattaatcatattatttgtag 18107675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 192 - 303
Target Start/End: Original strand, 33923766 - 33923877
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||  | ||| ||||| | | |||||| |||||||||| |||||||||||| ||||||||||||||| | |||  | ||| |||| |||||    
T  33923766 tattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgaatttcggtgacttaggtttta 33923865  T
Q  292 tcatattatttg 303  Q
    ||||||||||||    
T  33923866 tcatattatttg 33923877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 147 - 232
Target Start/End: Original strand, 11812699 - 11812784
Alignment:
Q  147 gacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaat 232  Q
    |||||||||||||||||||||||||||||||| |  |||| ||| ||| ||||||||| ||||| || || | |||||||||||||    
T  11812699 gacgttgtttgattttgtgtcttgttgcggtgtttatttgattcctatagaaagatcagcttcagtcgattacagattcaatcaat 11812784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 43397240 - 43397044
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||| |||| ||||||||||||||||| ||||| |   ||||||||| | ||||||| |||||| ||||||  ||| ||||||||||||  |    
T  43397240 gtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgtggc---gtttgatttcgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcggc 43397144  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacg-ttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
     | |  |||  |   |||||| |||||||||| ||||||||| ||| ||||||||||||||| | |||    ||| |||| |||||||||||||||||||    
T  43397143 attagccaactacgaattcaaccaatgatttgggcgtcaacgtttgaagatccggaagcatgtgaatttcagtgacttaggttttatcatattatttgta 43397044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 17994739 - 17994655
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||||  ||||||||||| | |||||||| ||| ||||||  | ||| ||| |||||||||||||||||||||    
T  17994739 attcaatcaatgatttggacgtcaacgttgcacatccggaaccataggtatttcggtgacttaaattttatcatattatttgtag 17994655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 305
Target Start/End: Complemental strand, 33585801 - 33585661
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 264  Q
    ||||||| |||||| | |||  |||| |||||||| |||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||||||||||    
T  33585801 gtcttgtcgcggtgtttgttcagttcctattgaaaaatctacctcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagc 33585702  T
Q  265 atgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||| ||| |  | |||||||  |||||||||||||||||||    
T  33585701 atgagtaattcggtgatttaagttttatcatattatttgta 33585661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 459347 - 459269
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    |||| |||||||||||| ||  ||||||||||||||||  |||||||||||||| || |||| ||| ||||||||||||    
T  459347 tgtgctgttcgtcgtcttgtacgacgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 459269  T

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Target: chr2; HSP #52
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 155 - 300
Target Start/End: Original strand, 8809304 - 8809449
Alignment:
Q  155 ttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag 254  Q
    ||||||| | ||||||| |||||| |||  | |||| ||||||||||||  | ||| ||||| | |  |||||||||||||||| ||| |||| ||| ||    
T  8809304 ttgatttcgcgtcttgtcgcggtgttcgcatagttcctattgaaagatcgacatcagtcaattacaagttcaatcaatgatttgggcgccaacattgcag 8809403  T
Q  255 atccggaagcatgggtattctgatgatttagattttatcatattat 300  Q
    ||||||||||||| | |||    ||| |||||||||||||||||||    
T  8809404 atccggaagcatgagaatttcagtgacttagattttatcatattat 8809449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 9169379 - 9169183
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| |||||||||||| |||| |||   ||| |||||||||   || |||  ||| || | ||| ||||| | ||||||||||  |    
T  9169379 gtcgtctaagtgcggcgttgtgttgttcgttgtcttgtg---cgtcgtttgatttcacgttttgccgcgatgtttgttcggttcctcttgaaagatctac 9169283  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| | ||| | | ||||||  |||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  | ||||||||||||||||||    
T  9169282 atcagtgaattacaaattcaacgaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtcttatcatattatttgtag 9169183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 250
Target Start/End: Complemental strand, 36175562 - 36175477
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgtt 250  Q
    |||||||||||||| ||||||||||  ||||||||||||| | |||  |||| | | |||||||||||||||||  ||||||||||    
T  36175562 gtcttgttgcggtgttcgtttggtttctattgaaagatcaacatcaaacaattacatattcaatcaatgatttggacgtcaacgtt 36175477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 37614198 - 37614121
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    |||||||||| |||||| ||| | ||||||||||||||  |||||||||||||| || |||| ||| |||||||||||    
T  37614198 tgtgttgttcttcgtcttgtgcgtcgttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagat 37614121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 108 - 184
Target Start/End: Complemental strand, 12648043 - 12647967
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtt 184  Q
    ||||| |||||||| | ||||||||||||||||| ||| | |||||||||||||   |||||||||||||| |||||    
T  12648043 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttctcgtcttgttgcggtgttcgtt 12647967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 19062361 - 19062281
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||||||||||||||||  ||||||||||  ||||||| |||||||||||||  | ||| |||  ||||||||||||||||    
T  19062361 attcaatcaatgatttggacgtcaacgtttcagatccgaaagcatgggtatttcggtgacttaagttttatcatattattt 19062281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 9418426 - 9418501
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||||||||| ||||  | || ||||||||| |||||||||||| || || |||||||| |||||||||||    
T  9418426 tgttgttcgtcgtcttgtgtagcattatttgattttttgtcttgttgcgatgttcatttggttcctattgaaagat 9418501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 224 - 306
Target Start/End: Complemental strand, 4041601 - 4041519
Alignment:
Q  224 tcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| ||||||||||  ||||||||||| ||||||| ||||||| |||||  ||| | ||||  |||||||||||||||||||    
T  4041601 tcaaccaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcgataacttaggctttatcatattatttgtag 4041519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 7646452 - 7646653
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||||||||||| ||| | ||||   |||||| | || |||| | |||| | |||   ||||| ||||||||||  |    
T  7646452 gtcgtctaagtgcggcgttatgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgtggtgtttgttcaattctttttgaaagatctac 7646548  T
Q  207 ttcactcaatcatagattcaatcaatgattt-----gtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
     ||| ||||| | | ||||||||||||||||     |  ||||||||||| ||||||||||||||| |||||  | ||| |||  |||||||||||||||    
T  7646549 atcagtcaattacaaattcaatcaatgatttaatttggacgtcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattatt 7646648  T
Q  302 tgtag 306  Q
    |||||    
T  7646649 tgtag 7646653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 305
Target Start/End: Original strand, 7448233 - 7448421
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| ||| || | |||  || | | ||||||||||  | ||| ||    
T  7448233 aagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcgatgtttgttcagtgcctcttgaaagatctacatcagtc 7448329  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||| | | |||||| |||| |||||  ||||||||||| ||||||||||||||| |||||    ||| |||  |||||||||||||||||||    
T  7448330 aattacatattcaaccaataatttggacgtcaacgttgcagatccggaagcatgagtatttcagtgacttaagttttatcatattatttgta 7448421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 253 - 306
Target Start/End: Original strand, 21612360 - 21612413
Alignment:
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||  |||||||| ||||||| ||||||||||||| |||||||    
T  21612360 agatccggaagcataagtattctggtgatttatattttatcatattgtttgtag 21612413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 27097527 - 27097332
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | | ||   ||||||    | |||| |||||| | |||  |||| | ||||||||||  |    
T  27097527 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcatt---tgatttcaccttttgtcgcggtgtttgttcagttcctcttgaaagatctac 27097431  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||| |||||||| ||||||  | ||| |||  ||||||||||||||||||||    
T  27097430 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatctggaagcat-ggtatttcggtgacttaagttttatcatattatttgtag 27097332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 36691853 - 36692049
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | |||||||| |||| | ||| ||||||   |||||| |  |||||| |||||| |||||| |||  || ||||||||   |    
T  36691853 gtcgtctaagtgcggcgttttgttgttcatcgtttagtgcgacgtt---tgatttcgcatcttgtcgcggtgttcgtttagtttctactgaaagattgac 36691949  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||  ||||| | | |||||| ||||||||||  ||||||| ||| ||||||  ||||||| | |||  | |||||||| ||||||||||||||||||||    
T  36691950 atcggtcaattacaaattcaagcaatgatttggacgtcaacattgcagatcctaaagcatgtgaatttcggtgatttaggttttatcatattatttgtag 36692049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 9986413 - 9986337
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  9986413 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 9986337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 31788547 - 31788631
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||||||  ||||||||||| ||||||| ||||||| |||||    ||| |||| ||||| ||||||||||||||    
T  31788547 attcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgagtatttcagtgacttaggttttaacatattatttgtag 31788631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 273
Target Start/End: Original strand, 35220347 - 35220467
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||||| || ||||  ||||| || ||| |||| ||||||||||||| | ||| || || | | |||||| |||||||||| |||||||| |||     
T  35220347 gtttgattttgcgttttgtcacggtgttcatttagttcctattgaaagatcaacatcagtccattacaaattcaaccaatgatttgggcgtcaactttgc 35220446  T
Q  253 agatccggaagcatgggtatt 273  Q
    |||||   |||||||||||||    
T  35220447 agatcttaaagcatgggtatt 35220467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 30420688 - 30420763
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| |||||||||||    
T  30420688 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagat 30420763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 301
Target Start/End: Complemental strand, 32092422 - 32092247
Alignment:
Q  126 gtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattc 225  Q
    |||||||||||  ||| ||| | || ||||| |||| | ||||||  ||| || | ||||| ||| |||||||  |||  ||||| || |||||||||||    
T  32092422 gtgttgttcgttatcttgtgcgccgatgttttatttagcgtcttgccgcgatgtttgtttgtttcatattgaattatctacttcaatccatcatagattc 32092323  T
Q  226 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
    ||||||||||||   ||||||| ||  ||||||  || ||||  ||||||| | ||||||||||| ||||||||||    
T  32092322 aatcaatgatttcaacgtcaacattacagatccaaaaacatgaatattctgttaatttagattttgtcatattatt 32092247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 223 - 298
Target Start/End: Original strand, 38293641 - 38293716
Alignment:
Q  223 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt 298  Q
    |||||||||||||| | |||||||||||||||||||||| |||  | |||||| |||| ||  ||||||| |||||    
T  38293641 ttcaatcaatgattcgagcgtcaacgttgtagatccggatgcaccgatattctaatgactttaattttattatatt 38293716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 233 - 274
Target Start/End: Original strand, 17319423 - 17319464
Alignment:
Q  233 gatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    |||||| |||||||||||| ||||||| ||||||||||||||    
T  17319423 gatttgagcgtcaacgttgcagatccgaaagcatgggtattc 17319464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 28227786 - 28227709
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    |||| |||||||||||| ||| ||||||||| |||||   |||||||||| ||  ||||| | |||||||||||||||    
T  28227786 tgtgctgttcgtcgtcttgtgcgacgttgttagatttctcgtcttgttgctgtattcgttggattcttattgaaagat 28227709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 222
Target Start/End: Original strand, 37628697 - 37628793
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcataga 222  Q
    |||||| |||||||||| ||| | |||||||||||| | | |||||||| |||| | ||||||||||| |||||| ||||  |||| ||||| |||||    
T  37628697 tgtgttattcgtcgtctcgtggg-cgttgtttgattctctttcttgttgtggtgtttgtttggttcttgttgaaatatcaatttcagtcaattataga 37628793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 151 - 272
Target Start/End: Original strand, 41327523 - 41327644
Alignment:
Q  151 ttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgtt 250  Q
    |||||||||||   || ||||||||||| ||||||||||  ||||||||||||   |||| ||||| | | |||||| ||||||||||  ||||||| ||    
T  41327523 ttgtttgatttcacgtattgttgcggtgttcgtttggtttctattgaaagatctatttcagtcaattacaaattcaaccaatgatttggacgtcaacatt 41327622  T
Q  251 gtagatccggaagcatgggtat 272  Q
      ||||||  || |||||||||    
T  41327623 acagatccataaacatgggtat 41327644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 2808462 - 2808386
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 297  Q
    |||||||||| |||||  |||||||||||| ||||||||||| ||||| ||||| ||| | ||  ||||||||||||    
T  2808462 attcaatcaaagattttggcgtcaacgttgcagatccggaagccatggatattccgatcactttaattttatcatat 2808386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 3269182 - 3269106
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||| | ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  3269182 tgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3269106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 3269741 - 3269665
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||| | ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  3269741 tgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3269665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 3270300 - 3270224
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||| | ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  3270300 tgttgttcgtcgttttgtggggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 3270224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #79
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 258
Target Start/End: Original strand, 3725271 - 3725307
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatcc 258  Q
    |||||||||| |||||| |||||||||||||||||||    
T  3725271 attcaatcaaagatttgagcgtcaacgttgtagatcc 3725307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #80
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 6173642 - 6173718
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    |||||||||| |||| ||||| ||||||||||||||   ||||  ||||||| || |||| ||| ||||||||||||    
T  6173642 tgttgttcgttgtcttgtgtggcgttgtttgattttccatctttgtgcggtgttcatttgattcatattgaaagatc 6173718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #81
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 6173723 - 6173799
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 297  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||| | ||| ||  ||||||||||||    
T  6173723 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtgactttaattttatcatat 6173799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #82
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 7015782 - 7015710
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaa 199  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||    
T  7015782 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaa 7015710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #83
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 8805876 - 8805952
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| |||||||||||||||   |||||  || |||| || |||| ||| ||||||||||||    
T  8805876 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgtggtgttcatttgattcatattgaaagatc 8805952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #84
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 14416157 - 14416201
Alignment:
Q  117 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattt 161  Q
    ||||||| ||| ||||||||||||| ||||| |||||||||||||    
T  14416157 tgcggcgttgtattgttcgtcgtcttgtgtggcgttgtttgattt 14416201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #85
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 20047153 - 20047077
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||  |||||| || ||||| || |||  ||| ||||||||||||    
T  20047153 tgttgttcgtcgtcttgtgcggcgttgtttgatttcatgtcttcttacggtgttcattttattcctattgaaagatc 20047077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #86
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 26025481 - 26025405
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||| ||||||||| ||| | ||||||||||||||  ||||| |||||||| || |||| ||| | ||||||||||    
T  26025481 tgttggtcgtcgtcttgtgcggcgttgtttgatttttcgtcttcttgcggtgttcatttgattcatcttgaaagatc 26025405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #87
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 27249222 - 27249146
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  27249222 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatc 27249146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #88
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 38293559 - 38293591
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgat 159  Q
    ||||||||||||||| |||||||||||||||||    
T  38293559 tgttgttcgtcgtcttgtgtgacgttgtttgat 38293591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #89
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 39310861 - 39310778
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||| ||||||| || ||||| ||| | ||||| | |||||||||||    ||| |||||||||||||||||||||||||    
T  39310861 attcaatcattgatttgggcatcaacattgcacatccg-aggcatgggtatttcagtgacttagattttatcatattatttgtag 39310778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 96; Significance: 4e-47; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 47132880 - 47133071
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    |||| |||| ||||||||||||||| | ||| | |||||||| |||| | |||||||||||||| ||||||| ||| ||||||||||||| ||||| |||    
T  47132880 agtggggcgttgtgttgttcgtcgttttgtgcggcgttgtttaatttcgcgtcttgttgcggtgttcgtttgcttcatattgaaagatcagcttcagtca 47132979  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||||||| ||||||||  ||||||| ||| ||||||||||||||| |||||||| |||||||||||| |||||||| |||||||    
T  47132980 atcacagattcaatcgatgatttggacgtcaacattgcagatccggaagcatgagtattctggtgatttagatttcatcatattttttgtag 47133071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 149 - 301
Target Start/End: Original strand, 16262872 - 16263024
Alignment:
Q  149 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacg 248  Q
    ||||||||||||| | ||||||||| |||| ||||||| ||| |||||||| |||| || || ||||||| | |||||||||||||||||||| ||||||    
T  16262872 cgttgtttgatttcgcgtcttgttgtggtgttcgtttgattcatattgaaaaatcaactgcagtcaatcacatattcaatcaatgatttgtgcatcaacg 16262971  T
Q  249 ttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
    ||| ||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  16262972 ttgcagatccggaagcatgagtattctgatgatttagattttatcatgttatt 16263024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 48750158 - 48750353
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||||||||| ||| ||||||||||||||| |  |||| |    ||||||| ||||||| ||| ||||||||||||| |||||    
T  48750158 agtgcgacgttgtgttgttcgtcgtcttgtgcgacgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgattcgtattgaaagatcagcttca 48750257  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | ||| ||||||||||||| |||||||||||| ||||||  |||||||||||||||| |||||||||||| ||||||||||||||||    
T  48750258 gacaatcacaaatttaatcaatgatttgggcgtcaacgttgcagatccataagcatgggtattctggtgatttagatttcatcatattatttgtag 48750353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 24582938 - 24583118
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    |||||||||| ||| || ||| | ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||| |||||    
T  24582938 tgtgttgttcatcgccttgtgcggcgttgtttgatttggcatcttgttgcggtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacagatt 24583036  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||  ||||||||||| |||||| |||||| |  ||||||| ||||||||||| |||||||||||||||||    
T  24583037 caatcaatgatttggacgtcaacgttgcagatccagaagcaagaatattctggtgatttagattatatcatattatttgtag 24583118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 49626901 - 49627081
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | |||||||||||||    ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||| | |||    
T  49626901 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttgacatcttgttgcggtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacaaatt 49626999  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||  ||||||||||| |||| | |||||| | |||||||||||||||||||| |||||| ||||||||||    
T  49627000 caatcaatgatttggacgtcaacgttgcagatgcagaagcaagagtattctgatgatttagattatatcatcttatttgtag 49627081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 44543242 - 44543440
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||||| |  ||||||||||||||| |  || | ||||||||||||| |  |||| |||||||| ||||| ||||| ||||||||||||| |    
T  44543242 gtcgtctaagtgcgactttgtgttgttcgtcgtattatgcggcgttgtttgatttggcatcttattgcggtgttcgtt-ggttcatattgaaagatcagc 44543340  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    || | ||||||| |||||||||||||||||||  ||||||||||| |||||| |||||| | |||||||  ||||||||||| |||||||||||||||||    
T  44543341 tttagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccagaagcaagagtattctagtgatttagattatatcatattatttgtag 44543440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 14872612 - 14872807
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    ||||||||||||||||  ||||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| || ||| ||||| |||||||||||  |    
T  14872612 gtcgtccaagtgcggcattgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgttcatttagttct-attgaaagatcgac 14872707  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||| |||||||||||| ||||||||||||||||||||| || ||| |||| ||||||||||||||||||||    
T  14872708 atcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgggtattttggtgacttaggttttatcatattatttgtag 14872807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 19060879 - 19061077
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||||| |  ||||||||||||||||| ||||| |||||||||||||    ||||||||| ||| ||||| ||||| ||||||||||| | |    
T  19060879 gtcgtctaagtgcgaccttgtgttgttcgtcgtcttgtgtggcgttgtttgatttgacatcttgttgcagtgttcgtt-ggttcatattgaaagattagc 19060977  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| ||||||| || |||||||||| |||||  | |||| ||||||||||| |||| | | |||||||| ||||||||||| |||||||||||||||||    
T  19060978 ttcagtcaatcacaggttcaatcaataatttggacatcaatgttgtagatccagaaggaagagtattctggtgatttagattatatcatattatttgtag 19061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 117 - 306
Target Start/End: Original strand, 41994406 - 41994595
Alignment:
Q  117 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaat 216  Q
    ||||||| |||||||||| |||||| |||   ||||||||||||| |  |||||||| |||| |||||| |||| |||||||||||||  |||| |||||    
T  41994406 tgcggcgttgtgttgttcatcgtcttgtgcagcgttgtttgatttcggatcttgttgtggtgttcgtttcgttcatattgaaagatcagtttcagtcaat 41994505  T
Q  217 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    || | ||| |||||||||||||  |||||||||||   ||||||||| | | |||||||| |||||||||||||||||| ||||||||||    
T  41994506 caaatatttaatcaatgatttggacgtcaacgttgctaatccggaagaacgagtattctggtgatttagattttatcattttatttgtag 41994595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 175 - 306
Target Start/End: Complemental strand, 37720204 - 37720073
Alignment:
Q  175 ggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    |||| ||||||||||| ||||||||||||| |||||  |||||| | ||||| | ||||||||| |||||||||||| ||||||  ||||||||||||||    
T  37720204 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcatttaatgatttgggcgtcaacgttgcagatccaaaagcatgggtattc 37720105  T
Q  275 tgatgatttagattttatcatattatttgtag 306  Q
    || | |||||||||||||||||||||||||||    
T  37720104 tggttatttagattttatcatattatttgtag 37720073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 5983808 - 5984004
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||||||||||| ||| | ||||   |||||| ||||||||| |||||| | |||| |||| ||||||||||||  |    
T  5983808 gtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgtgtcttgtcgcggtgtttgtttagttcctattgaaagatctac 5983904  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||| ||||||||| || |||||||||||||||||||||  | ||| |||  ||||||||||||||||||||    
T  5983905 atcagtcaattacaaattcaaccaatgatttgggcgtcaacgctgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtag 5984004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 108 - 306
Target Start/End: Complemental strand, 7337782 - 7337587
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||||| ||||||||||||||||| |||  |||||   |||||| | ||||||| |||||| | |||  |||| ||||||||||||  |     
T  7337782 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcatattgaaagatctaca 7337686  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | |||||| | ||||||||||||||||||||    
T  7337685 tcaatcaattacaaattcaagcaatgatttgcacgtcaacgttgcagatccggaagcatgggtatttcggtgattttggttttatcatattatttgtag 7337587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 36775760 - 36775634
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    ||||||||||| ||||||||||||  |||||  |||||| | ||||||||||||||||| |||||||||||| |||||| ||| ||||||||| | | ||    
T  36775760 tcgtttggttcgtattgaaagatcggcttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaaacatgggtatcccggtg 36775661  T
Q  280 atttagattttatcatattatttgtag 306  Q
    |||||||||| ||||||||||||||||    
T  36775660 atttagatttcatcatattatttgtag 36775634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 21947738 - 21947542
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||| ||||||||||||||||||||| |   ||||  ||||||||| | ||||||| |||||| | |||| |||||||||||||||||  |    
T  21947738 gtcgtctaagtgcagcgctgtgttgttcgtcgtctcg---gacggcgtttgatttcgcgtcttgtcgcggtgtttgtttagttcttattgaaagatctac 21947642  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||  ||||  | ||| |||  ||||||||||||||||||||    
T  21947641 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgaatatttcggtgacttaagttttatcatattatttgtag 21947542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 34413199 - 34413016
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 220  Q
    ||||||||||||||||| ||| | ||||||||||||| |  |||| |    ||||||| ||||||| ||  ||||||||||||| || ||  |||||| |    
T  34413199 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttgatttgtattgaaagatcagctccagacaatcaca 34413100  T
Q  221 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||||||||||| ||  |  |||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  34413099 aattcaatcaataat--ggacgtcaacgttgtagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtag 34413016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 154 - 306
Target Start/End: Original strand, 44915655 - 44915807
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||||| || |||| |||||| |||||| |||| ||||||||||||| | ||| ||||| | | ||||||||||||||||| ||||||| |||| |    
T  44915655 tttgattttgcgttttgtcgcggtgttcgtttagttcatattgaaagatcaacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgca 44915754  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||| |||||  | |   |||||||||||||||||||||||||    
T  44915755 gatccggaagcatgagtatttcggtttcttagattttatcatattatttgtag 44915807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 116 - 298
Target Start/End: Original strand, 12635148 - 12635330
Alignment:
Q  116 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaa 215  Q
    |||||||| ||||||||||||||||| ||| | ||||||||||||||  || |||| | |||| || |||||||| ||||||||||||| ||| | | ||    
T  12635148 gtgcggcgttgtgttgttcgtcgtcttgtgcggcgttgtttgattttacgttttgtagtggtgttcatttggttcatattgaaagatcaactttagtaaa 12635247  T
Q  216 tcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt 298  Q
    ||| | |||||||||||||||||  ||||| | ||  | |||  |||||||||||||||||  |||||| |||||||||||||    
T  12635248 tcacaaattcaatcaatgatttgcacgtcagcctttcatatcacgaagcatgggtattctggcgatttatattttatcatatt 12635330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 16161811 - 16161996
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||||||||| ||| | |||||||||||||    |||| |    ||||||| ||||||||||| ||||||||||||| ||| |    
T  16161811 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttaa 16161910  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | ||||| ||||||||||| |||||||||||          |||||||||||||||| |||||||||||||||||||||||||||||    
T  16161911 gacaatcacaaattcattcaatgatttgggcgtcaacgtt----------aagcatgggtattctgctgatttagattttatcatattatttgtag 16161996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 206 - 304
Target Start/End: Complemental strand, 24597348 - 24597250
Alignment:
Q  206 cttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgt 304  Q
    ||||| ||||| ||| |||||||||||||||||  |||||||||||||||||||||||||||||||||||||| | ||| | ||||| |||||||||||    
T  24597348 cttcagtcaattataaattcaatcaatgatttggacgtcaacgttgtagatccggaagcatgggtattctgattacttatactttataatattatttgt 24597250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 45415530 - 45415726
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||||||||||| |||   | | ||||||||| | ||||||| |||||| | |||  |||| ||||||||||||  |    
T  45415530 gtcgtctaagtgcggcgttttgttgttcgtcgtcttgtg---catcgtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctac 45415626  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | | |||| ||||||||||  ||||||||||| |||||||||||||| ||||||  | ||| |||| ||||||||||||||||||||    
T  45415627 atcaatcaattacaaactcaagcaatgatttggacgtcaacgttgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtag 45415726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 35484511 - 35484316
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| |||   |||  |||| ||| | ||||||| |||||| | |||   ||| ||||||||||||  |    
T  35484511 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg---cgtcatttgctttcgcgtcttgtcgcggtgtttgttcaattcctattgaaagatctac 35484415  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||||| |||||||||||||  | |||||| | |||||||||||||||||||    
T  35484414 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccgaaagcatgggtatttcggtgatttcggttttatcatattatttgta 35484316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 123 - 303
Target Start/End: Original strand, 43412359 - 43412539
Alignment:
Q  123 gctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcataga 222  Q
    |||||||||||| ||||||  || |||||| ||||| || ||||||  |||| ||| | ||||| ||| |||||||| |||   |||| ||||||  | |    
T  43412359 gctgtgttgttcatcgtcttttgcgacgttatttgagttcgtgtctaattgcagtgtttgtttgattcatattgaaatatctatttcaatcaatcgcata 43412458  T
Q  223 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    ||||||||||||||||   |||||||||| |||||| |||||||| ||||| || |||| |||||||||||||||||||||    
T  43412459 ttcaatcaatgatttgaaagtcaacgttgcagatccagaagcatgcgtattttggtgatctagattttatcatattatttg 43412539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 127 - 306
Target Start/End: Original strand, 9341716 - 9341894
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattca 226  Q
    ||||||||||||||| |||   |||||||||||| ||||||||||||||||| | ||||| ||| |||| ||  ||||  |||| ||||||| | ||||     
T  9341716 tgttgttcgtcgtcttgtgcagcgttgtttgattctgtgtcttgttgcggtgtttgtttgattcatattaaactatcaa-ttcaatcaatcacatattcc 9341814  T
Q  227 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| ||||  |||||||| || |||| | | ||||||  ||||||| ||| |||||||||||||||||||||||||    
T  9341815 atcaatgttttggacgtcaacgatgcagattcaggagcatgtatattctggtgacttagattttatcatattatttgtag 9341894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 155 - 306
Target Start/End: Original strand, 45789558 - 45789709
Alignment:
Q  155 ttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag 254  Q
    ||||||||  || |||||||| || | ||||||||| |||||||| |||| ||| | ||||| | ||||||||||||||||||| ||||| |||||||||    
T  45789558 ttgattttacgtgttgttgcgatgtttgtttggttcctattgaaatatcaactttaatcaattacagattcaatcaatgatttgggcgtcgacgttgtag 45789657  T
Q  255 atccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||| | |||    ||| ||||| ||||| |||||||||||||    
T  45789658 atccggaagcatgtgcatttctttgacttagaatttattatattatttgtag 45789709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 267
Target Start/End: Original strand, 1742253 - 1742410
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| ||||||   |||||| | ||||||| | |||| ||||||  ||| ||||||||||||  |    
T  1742253 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgatttcgcgtcttgtcgtggtgttcgtttatttcctattgaaagatcggc 1742349  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg 267  Q
     ||| ||||| | | |||||| |||||||||| |||||||||||| ||||||| |||||||    
T  1742350 atcaatcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatg 1742410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 169 - 303
Target Start/End: Original strand, 18939351 - 18939484
Alignment:
Q  169 tgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgg 268  Q
    |||||||||| || ||||||| |||||||||||||| ||||| ||||| | ||||| |||||||||||||  |||| |||||| ||||| |||||||||     
T  18939351 tgttgcggtgttcatttggtt-ttattgaaagatcaacttcagtcaattacagatttaatcaatgatttggacgtcgacgttgcagatctggaagcatgt 18939449  T
Q  269 gtattctgatgatttagattttatcatattatttg 303  Q
    ||||| || ||| ||||| ||||||| ||||||||    
T  18939450 gtattttggtgacttagaatttatcaaattatttg 18939484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 301
Target Start/End: Complemental strand, 27580238 - 27580057
Alignment:
Q  117 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaat 216  Q
    ||||||| ||||||||||||||| | ||||| |    |||||||||| ||||||| |||||| || ||| |||| ||||||||||||  ||||| | |||    
T  27580238 tgcggcgttgtgttgttcgtcgtatcgtgtggc---atttgattttgcgtcttgtcgcggtgttcatttagttcctattgaaagatcgacttcagtaaat 27580142  T
Q  217 catagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
     | | ||||||| ||||||||| |||||||| ||| |||| || ||||||| |||||  | ||| ||||||||||||||||||||    
T  27580141 tacaaattcaataaatgatttgggcgtcaacattgcagattcgaaagcatgagtatttcggtgacttagattttatcatattatt 27580057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 132 - 306
Target Start/End: Complemental strand, 6217925 - 6217747
Alignment:
Q  132 ttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaa 231  Q
    ||||| |||| ||| ||||||||||||||||| ||||||||  | || |||||||||   ||||||||||||| ||||| ||||||| | ||||||||||    
T  6217925 ttcgttgtcttgtgcgacgttgtttgattttgcgtcttgttatgttgttcgtttggtatatattgaaagatcaacttcagtcaatcacaaattcaatcaa 6217826  T
Q  232 tgatttgtgcgtcaacgttgtagatccggaagcatggg----tattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||   |||||| ||| | ||| | ||||||| |    ||| ||  |||||||||||||||||||||||||||||    
T  6217825 tgatttggatgtcaacattgcatatctgtaagcatgagtgaatatcctcgtgatttagattttatcatattatttgtag 6217747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 306
Target Start/End: Original strand, 3228297 - 3228437
Alignment:
Q  166 tcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagca 265  Q
    |||||| |||||| | |||| |||| ||||||||||||    ||| ||||| | | || |||||||||||||| |||||||||||| ||||||| || ||    
T  3228297 tcttgtcgcggtgtttgtttagttcctattgaaagatcgatatcagtcaattacaaatacaatcaatgatttgggcgtcaacgttgcagatccgaaatca 3228396  T
Q  266 tgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||  |||||||||| ||||||||||||||||||||    
T  3228397 tggatatttcgatgatttaggttttatcatattatttgtag 3228437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 306
Target Start/End: Complemental strand, 7836915 - 7836720
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||||| ||||||||||||||||| ||| ||||||   |||||| | ||||||| |||| | ||||||  ||| ||| ||||||||  |     
T  7836915 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcgacgtt---tgatttcgcgtcttgtcgcggcgttcgtttatttcctatcgaaagatcgaca 7836819  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||| | | |||||| |||||||||| |||||||||||| | ||| ||| ||||| | |||  | ||| |||| ||||||||||||||||||||    
T  7836818 tcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaatatctggaggcatgtgaatttcggtgacttaggttttatcatattatttgtag 7836720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 206 - 306
Target Start/End: Original strand, 25564066 - 25564166
Alignment:
Q  206 cttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||||| ||||||| ||||||||||||||||||| |||||||| ||| ||||| |||||||||  ||||||| ||||||| ||||||| ||||| ||||||    
T  25564066 cttcagtcaatcacagattcaatcaatgatttgggcgtcaacattgcagatctggaagcatgattattctggtgatttatattttattatattgtttgta 25564165  T
Q  306 g 306  Q
    |    
T  25564166 g 25564166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 114 - 306
Target Start/End: Complemental strand, 34878391 - 34878202
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||| ||||| ||||||||||||||||| |||   || |||||||||| | || |||| |||||| | |||   ||| ||||||||||||  | ||| ||    
T  34878391 aagtacggcgttgtgttgttcgtcgtcttgtg---cggtgtttgatttcgcgttttgtcgcggtgtttgttaatttcctattgaaagatcggcatcagtc 34878295  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg-ggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| |||||||||| |||||||||||| ||||||||||||||| | ||||| | ||| |||| ||||||||||||||||||||    
T  34878294 aattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcatgtgatattcag-tgacttaggttttatcatattatttgtag 34878202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 155 - 257
Target Start/End: Complemental strand, 49648949 - 49648847
Alignment:
Q  155 ttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag 254  Q
    |||||||| ||||||||||||||| |  |||||||||||| |||||||   |||||  |||| ||| ||||||| |||||||||||||||||||||||||    
T  49648949 ttgattttatgtcttgttgcggtgtttatttggttcttatcgaaagattgacttcaaccaattatacattcaattaatgatttgtgcgtcaacgttgtag 49648850  T
Q  255 atc 257  Q
    |||    
T  49648849 atc 49648847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 10776581 - 10776385
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| |||||||||||||||||  || | ||||   ||||| || ||||||| |||||| ||||||  ||| | ||||||||||  |    
T  10776581 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttatgcggcgtt---tgattgtgcgtcttgtcgcggtgttcgtttacttccttttgaaagatcgac 10776485  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | || ||||||||||||||  ||||||| ||| |||||| |||||||| |||||  | ||| |||| ||||||||| ||||||||||    
T  10776484 atcagtcaattacaaatccaatcaatgatttggacgtcaacattgcagatccagaagcatgagtatttcggtgacttaggttttatcattttatttgtag 10776385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 237
Target Start/End: Original strand, 34528700 - 34528829
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||||  ||||||||||||||||| | | |  |||||||||||| |  ||||||| ||||| |  |||||||  ||||||||||||| ||    
T  34528700 tcgtctaagtgcggcattgtgttgttcgtcgtcttgcgcggtgttgtttgatttcgcatcttgtttcggtgtttctttggtttatattgaaagatcaact 34528799  T
Q  208 tcactcaatcatagattcaatcaatgattt 237  Q
    ||| ||||||| ||||||||||||||||||    
T  34528800 tcagtcaatcacagattcaatcaatgattt 34528829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 31317821 - 31317904
Alignment:
Q  223 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||| |||||||||||  ||| |||||||||||| ||||  | ||||||||| |||||||||||||||||||    
T  31317821 ttcaatcaatgatttgggcgtcaacgttacagacccggaagcatggatatttcggtgatttagaatttatcatattatttgtag 31317904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 153 - 303
Target Start/End: Complemental strand, 23291719 - 23291569
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| |  |||||| |||||| ||||||  ||| ||||||||||||  | ||| ||||| | | |||||| |||||||||| || |||||||||     
T  23291719 gtttgatttcgcttcttgtcgcggtgttcgtttatttcctattgaaagatcggcatcagtcaattacaaattcaaccaatgatttgggcatcaacgttga 23291620  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    ||||||||||||||| | |||  | ||| |||| |||||||||||||||||    
T  23291619 agatccggaagcatgtgaatttcggtgacttaggttttatcatattatttg 23291569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 224 - 302
Target Start/End: Original strand, 31984247 - 31984325
Alignment:
Q  224 tcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    ||||||||||||||| |||||||||||| | |||||||||||||||||||  | ||| |||| ||||||||||||||||    
T  31984247 tcaatcaatgatttgggcgtcaacgttgcaaatccggaagcatgggtatttcggtgacttaggttttatcatattattt 31984325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 224 - 305
Target Start/End: Original strand, 15492373 - 15492454
Alignment:
Q  224 tcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||||||||||||||| ||||||  |||| |||||| | ||||||| |||| || ||||||||||||||||||||||||||||    
T  15492373 tcaatcaatgatttgggcgtcagtgttgcagatcctggagcatggatattatggtgatttagattttatcatattatttgta 15492454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 267
Target Start/End: Original strand, 21686845 - 21687002
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||| ||||| ||||||||||||||||| ||| | ||||   |||||||| || |||| |||||| | |||   ||| |||||||||||   |    
T  21686845 gtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgttttgtcgcggtgtttgttaatttcctattgaaagataggc 21686941  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg 267  Q
     ||||||||| | | |||||| |||||||||| |||||||| ||| |||||||||||||||    
T  21686942 atcactcaattaaaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatg 21687002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 32679159 - 32679065
Alignment:
Q  212 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| |||||||||| ||||||||  || |||| ||| | ||||||||||||| ||||| || |||||||||||| |||||||| |||||||    
T  32679159 tcaatcacagattcaatcgatgatttggacgccaacattgcaaatccggaagcatgagtattatggtgatttagatttcatcatattttttgtag 32679065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 39927627 - 39927549
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||||| ||||| |||||||||||||   |||||||||||||| || |||| ||| ||||||||||||    
T  39927627 tgtgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttgttgcggtgttcatttgtttcatattgaaagatc 39927549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 128 - 305
Target Start/End: Complemental strand, 31692568 - 31692392
Alignment:
Q  128 gttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaa 227  Q
    |||||| ||||||| ||| |  ||||||||||||||  ||||||||||||| ||| ||||||| ||||||||||| | ||| | ||||| | | ||| ||    
T  31692568 gttgtttgtcgtcttgtgcggtgttgtttgattttgcttcttgttgcggtgttcg-ttggttcatattgaaagattagctttagtcaataacaaatttaa 31692470  T
Q  228 tcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||||||||||    ||||| |||||||||||| ||| |||  |||| || ||| ||  |||||||||||| |||||||    
T  31692469 tcaatgatttcgatgtcaatgttgtagatccgaaagtatgcatattttggtgaattttattttatcatataatttgta 31692392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 154 - 297
Target Start/End: Complemental strand, 51916737 - 51916599
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||| | ||||||| |||||  |||||| |||| ||||||||||  | | ||| ||||| | | ||||||||||||||||| |||||||||||| |    
T  51916737 tttgatttcgcgtcttgtcgcggt--tcgtttagttcctattgaaaga--aacgtcagtcaattacaaattcaatcaatgatttgagcgtcaacgttgca 51916642  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatat 297  Q
    ||| |||||||||| ||||| |  ||| ||||||||||||||||    
T  51916641 gatacggaagcatgagtatt-tcgtgacttagattttatcatat 51916599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 8211918 - 8211835
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||| || ||||||| |||| |||||||||||||||||||||   |||| |||| ||||||||||||||||||||    
T  8211918 attcaaccaatgatctg-gcgtcaatgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtag 8211835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 13075663 - 13075580
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||||||||||||||||  | | |||||||| ||||||| |  |||| |||||||  ||||||||||||||||||||||||||||    
T  13075663 attcaatcaatgatttaggaggcaacgttgcagatccgaagacatgagtattctagtgatttagattttatcatattatttgta 13075580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 226 - 292
Target Start/End: Original strand, 26535437 - 26535503
Alignment:
Q  226 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 292  Q
    ||||||||||||| || ||||||||| ||||||||||||||| |||||| | ||| |||||||||||    
T  26535437 aatcaatgatttgggcttcaacgttgcagatccggaagcatgagtattccggtgacttagattttat 26535503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 32873914 - 32873788
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    |||||| |||| ||||||| || |  ||||| ||||| | | ||| ||||||||||||  ||||||| |||| |||||| ||| ||||||||||  |||     
T  32873914 tcgtttagttcctattgaatgaccgacttcagtcaattacacatttaatcaatgatttaagcgtcaatgttgcagatccagaaacatgggtatttcgatc 32873815  T
Q  280 atttagattttatcatattatttgtag 306  Q
    | || ||||||||||||||||||||||    
T  32873814 actttgattttatcatattatttgtag 32873788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 50616713 - 50616599
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    |||||||| |||| ||||| | | ||| | ||| || |||||||||| | || |||||| ||||| |||||||||| ||||| |  ||||||| ||||||    
T  50616713 tattgaaatatcaacttcaattagtcagatatttaaccaatgatttgagtgttaacgttatagatacggaagcatgagtatttttgtgatttaaatttta 50616614  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  50616613 tcatattatttgtag 50616599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 50624540 - 50624426
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    |||||||| |||| ||||| | | ||| | ||| || |||||||||| | || |||||| ||||| |||||||||| ||||| |  ||||||| ||||||    
T  50624540 tattgaaatatcaacttcaattagtcagatatttaaccaatgatttgagtgttaacgttatagatacggaagcatgagtatttttgtgatttaaatttta 50624441  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  50624440 tcatattatttgtag 50624426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 306
Target Start/End: Original strand, 4413210 - 4413282
Alignment:
Q  234 atttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||||||||| |||||||||||||||  ||||  | ||| |||| ||||||||||||||||||||    
T  4413210 atttgggcgtcaacgttgcagatccggaagcatgaatatttcggtgacttaggttttatcatattatttgtag 4413282  T

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Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 15431674 - 15431590
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||| |||||||||||| ||||| || ||||| | ||||    |||  ||||||||||||||||||||||||    
T  15431674 attcaatcaatgatttgggcgtcaacgttgcagatctggcagcattgatatttcagtgacatagattttatcatattatttgtag 15431590  T

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Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 50166089 - 50166013
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 297  Q
    |||||||||| ||||||  ||||||||||||||||||||| | ||||||||||||| ||| ||  ||||||||||||    
T  50166089 attcaatcaaagatttggacgtcaacgttgtagatccggaggccatgggtattctggtgactttaattttatcatat 50166013  T

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Target: chr1; HSP #54
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 51871873 - 51871949
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| ||||||||||| ||||  ||||| |||||||| || |||  ||||||||||||||||    
T  51871873 tgttgttcgtcgtcttgtgcgacgttgtttgcttttccgtcttcttgcggtgttcattttattcttattgaaagatc 51871949  T

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Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 306
Target Start/End: Original strand, 14489401 - 14489440
Alignment:
Q  267 gggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  14489401 gggtattctggtgatttagattttatcatattatttgtag 14489440  T

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Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 187 - 302
Target Start/End: Original strand, 32395047 - 32395162
Alignment:
Q  187 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 286  Q
    |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |||| || |||||||||||||  | ||| |||      
T  32395047 gttcctattgaaagatctacatcattcaattacaaattcaaccaatgatttggacgtcaacgttgcagattcgaaagcatgggtatttcggtgacttaag 32395146  T
Q  287 ttttatcatattattt 302  Q
    ||||||||||||||||    
T  32395147 ttttatcatattattt 32395162  T

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Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 274
Target Start/End: Original strand, 1602084 - 1602225
Alignment:
Q  132 ttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaa 231  Q
    ||||||||||  || |||||||||||||||||  ||||||||||| | ||||||| ||  ||||||||||||  ||| | ||||| | |  |||||||||    
T  1602084 ttcgtcgtcttctgcgacgttgtttgattttgcatcttgttgcggcgttcgtttgatttctattgaaagatcgactt-agtcaattacaatttcaatcaa 1602182  T
Q  232 tgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    ||||||  || |||| |||| | ||||||||||| | ||||||    
T  1602183 tgatttaggcatcaatgttgcatatccggaagcacgtgtattc 1602225  T

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Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 235
Target Start/End: Complemental strand, 30506276 - 30506167
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||| ||||||| |||| || ||| ||||||||| |||  ||||||||| ||||||| ||| ||||||||||||  ||| | |||||   |||||    
T  30506276 tgtgttgttagtcgtcttgtgtaacattgattgattttgcgtcc-gttgcggtgttcgtttgcttcctattgaaagatcggcttgaatcaattgcagatt 30506178  T
Q  225 caatcaatgat 235  Q
    |||||||||||    
T  30506177 caatcaatgat 30506167  T

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Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 267
Target Start/End: Original strand, 31919003 - 31919117
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | ||||||| || ||| |||||| |||| | ||||||||||  | ||| ||||| | |  |||||||||||||||| || |||||||||     
T  31919003 gtttgatttcgcgtcttgtcgcagtgttcgtttagttcctgttgaaagatcgacatcagtcaattacaagttcaatcaatgatttgagcatcaacgttgc 31919102  T
Q  253 agatccggaagcatg 267  Q
    |||||| ||||||||    
T  31919103 agatccagaagcatg 31919117  T

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Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 192 - 298
Target Start/End: Original strand, 39888236 - 39888342
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||  ||||| ||||| | |  |||||||||||||||| ||||| ||||||||||||||   |||  ||||||  | ||| ||||||||||    
T  39888236 tattgaaagatcgacttcagtcaattacaacttcaatcaatgatttgggcgtccacgttgtagatccgagcgcacaggtatttcggtgacttagatttta 39888335  T
Q  292 tcatatt 298  Q
    |||||||    
T  39888336 tcatatt 39888342  T

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Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 48365838 - 48365760
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||| ||| |||  ||||||||||||||| |||||||| |||||| || |||| ||| ||||||| ||||    
T  48365838 tgtgttgttcgtcatcttgtgcaacgttgtttgattttttgtcttgtagcggtgttcatttgattcatattgaaggatc 48365760  T

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Target: chr1; HSP #62
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 14545608 - 14545684
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 297  Q
    |||||||||| |||||| |||||||||||| ||||||||| | |||| |||||| ||| ||||  ||||||||||||    
T  14545608 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatgagtattccgatcattttaattttatcatat 14545684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 35584689 - 35584613
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  35584689 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 35584613  T

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Target: chr1; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 39987480 - 39987532
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    |||||||||| || ||| |||||||||||| ||||||||| ||||||||||||    
T  39987480 attcaatcaaagaattgggcgtcaacgttgcagatccggaggcatgggtattc 39987532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 27456555 - 27456646
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtc 244  Q
    ||||||||| | ||||||| |||||| |||||| |||| ||||||||||||  | ||| ||||| | |  |||||||||||||||| |||||    
T  27456555 gtttgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagttcaatcaatgatttgggcgtc 27456646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 178
Target Start/End: Original strand, 27872748 - 27872799
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtg 178  Q
    ||||||||||||||| ||  |||||||||||||||| |||||| ||||||||    
T  27872748 tgttgttcgtcgtcttgttcgacgttgtttgattttttgtcttcttgcggtg 27872799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 44637429 - 44637508
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 204  Q
    |||||||||||| |||| ||| ||||||||||| |||   |||||||| ||||| || |||| ||| |||||||||||||    
T  44637429 tgtgttgttcgtagtcttgtgcgacgttgtttggtttcccgtcttgttacggtgttcatttgattcatattgaaagatca 44637508  T

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Target: chr1; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 39987401 - 39987475
Alignment:
Q  129 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||| ||| | ||||||||||||||  || ||| ||||||| || |||| ||| ||||||||||||    
T  39987401 ttgttcgtcgtcttgtgcggcgttgtttgattttccgtattgctgcggtgttcatttgattcatattgaaagatc 39987475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 799866 - 799813
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||| ||| |||||| |||||||| || |||||||| ||||||||||||    
T  799866 gttgtttgaatttttgtcttattgcggtgttcatttggttcatattgaaagatc 799813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 150 - 203
Target Start/End: Complemental strand, 7312153 - 7312100
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||    
T  7312153 gttgtttgattttccgtcttgttgcggtgttcatttgattcatattgaaagatc 7312100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 40163602 - 40163509
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 218  Q
    |||||| |||||||||| |||  || || ||||||| || || ||||||||||| | ||||||||  ||||| ||||||| ||||| |||||||    
T  40163602 tgtgttcttcgtcgtcttgtgcaacattctttgattatgcgttttgttgcggtgtttgtttggtttctattggaagatcagcttcagtcaatca 40163509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 13144820 - 13144736
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||||  ||||||  ||| ||||| | ||||||| |||||    ||| ||||||||||||||| |||||||||    
T  13144820 attcaatcaatgatttggacgtcaattttgcagatctgaaagcatgagtatttcagtgacttagattttatcataatatttgtag 13144736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 16989455 - 16989539
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| |||| ||||| ||||||| |||| |||||||||| |||| | |||    ||| |||| ||||||||||||||||||||    
T  16989455 attcaaccaataatttgagcgtcaaggttgaagatccggaatcatgtgaatttcagtgacttaggttttatcatattatttgtag 16989539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 24583278 - 24583314
Alignment:
Q  270 tattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| ||||||||||| |||||||||||||||||    
T  24583278 tattctggtgatttagattatatcatattatttgtag 24583314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 30879086 - 30879161
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  30879086 tgttgttcgtcgtcttgtgcg-cgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 30879161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 301
Target Start/End: Complemental strand, 35462038 - 35461978
Alignment:
Q  241 cgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
    ||||||||||| ||||||||||||||| |||||  | ||| |||  |||||||||||||||    
T  35462038 cgtcaacgttgcagatccggaagcatgtgtatttcggtgacttaagttttatcatattatt 35461978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 51868716 - 51868640
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | ||||||||| |||   ||||| |||||||| || |||  ||||||||||||||||    
T  51868716 tgttgttcgtcgtcttgtgcggcgttgtttgctttctcgtcttcttgcggtgttcattttattcttattgaaagatc 51868640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 1e-44; HSPs: 65)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 24069509 - 24069318
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| |||||||||||| |||| ||| | |||| |||||||| | || ||||||||||| ||||||| ||| |||||||| |||| ||||  |||    
T  24069509 agtgcggcgttgtgttgttcgttgtcttgtgcggcgttttttgatttggcgtattgttgcggtgttcgtttgattcatattgaaatatcagcttcgatca 24069410  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| || ||||||||||||||||  ||||||||||| ||| ||||||||||| | |||||| |||||||||||||||||||||||||||||    
T  24069409 atcacaggttcaatcaatgatttgaacgtcaacgttgcagacccggaagcatgaggattctggtgatttagattttatcatattatttgtag 24069318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 28476199 - 28476393
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||||||||| ||| | ||||||||||||| |  |||| |    ||||||| ||||||||||| ||||||||||||| |||||    
T  28476199 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttca 28476298  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | ||||| ||||||||||| |||||||||||| |||||| |||| |||||||||| | |||||||||||||||||||||||||||||    
T  28476299 gacaatcacaaattcattcaatgatttgggcgtcaacgttgcagatccagaagtatgggtattc-ggtgatttagattttatcatattatttgtag 28476393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 296
Target Start/End: Complemental strand, 38880693 - 38880512
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    |||||| || ||||||||| | ||||| ||  |||| ||||||||||||  ||||||||||||| ||||||||||||||||||||||||| ||||| |||    
T  38880693 agtgcgacgttgtgttgtttgccgtcttgtacgacgctgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaaagatcagcttcagtca 38880594  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcata 296  Q
    |||| | ||||||||||||||||| | | |||||||| ||||| ||||||||| ||||| |  | |||||||||||||||||    
T  38880593 atcacaaattcaatcaatgatttgggtgccaacgttgcagatctggaagcatgcgtattttagttatttagattttatcata 38880512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 125 - 302
Target Start/End: Complemental strand, 41553539 - 41553362
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| |||||||||| |||||||| | ||||||||  |||| ||||||||||| |||||||||||||  |||| ||||||| | |||    
T  41553539 tgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatatt 41553440  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    || | |||||||||  ||||||||||| |||||||||| ||| | |||| || |||||||||||||||||||| ||||    
T  41553439 cagttaatgatttggacgtcaacgttgcagatccggaaacatagatattttggtgatttagattttatcatatcattt 41553362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 180 - 304
Target Start/End: Original strand, 22742985 - 22743109
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    ||||||||||| ||||||||||||| |||||  |||||| | ||||||||||||||||| |||||||||||| |||||| |||||||| |||||||| ||    
T  22742985 tcgtttggttcgtattgaaagatcagcttcagccaatcacaaattcaatcaatgatttgagcgtcaacgttgcagatccagaagcatgagtattctggtg 22743084  T
Q  280 atttagattttatcatattatttgt 304  Q
    |||||||||| ||||||||||||||    
T  22743085 atttagatttcatcatattatttgt 22743109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 302
Target Start/End: Complemental strand, 24350956 - 24350767
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg--tgtcttgttgcg--gtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||||||||| ||| | |||||||||||||    | | |||||| |  ||| ||||||||||| ||||||||||||| |||||    
T  24350956 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcacattttttgttgtgcagtgttcgtttggttcgtattgaaagatcagcttca 24350857  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |  ||||| | ||||||||||||||||| |||||||||||| |||||| ||||||||||||||||| ||||||| |||| ||||||||||||    
T  24350856 c--aatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtgatttaaatttcatcatattattt 24350767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 114 - 306
Target Start/End: Complemental strand, 37837571 - 37837382
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| ||||||||||||||||| ||| | ||||   |||||||| ||||||| |||||| |||||| |||| ||||||||||||  | ||| ||    
T  37837571 aagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgtcttgtcgcggtgttcgtttagttcctattgaaagatcgacatcagtc 37837475  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| |||||||||| |||||||||||| ||||||||||||||| | |||  | ||| |||| ||||||||||||| ||||||    
T  37837474 aattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaagcatgtgaatttcggtgacttaggttttatcatattacttgtag 37837382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 175 - 302
Target Start/End: Original strand, 35132983 - 35133110
Alignment:
Q  175 ggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    |||| ||||||||||| ||||||||||||| |||||  |||||| | ||||||||||||||||| |||||||||||| ||||||  ||||||| ||||||    
T  35132983 ggtgttcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccaaaagcatgagtattc 35133082  T
Q  275 tgatgatttagattttatcatattattt 302  Q
    |  |||||||||||| ||||||||||||    
T  35133083 tagtgatttagatttcatcatattattt 35133110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 125 - 299
Target Start/End: Complemental strand, 3224515 - 3224342
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    |||||||||||| |||| ||| ||| || ||||||||   || |||||||| || ||||||||||| ||||||| ||||| ||||| |||||||  ||||    
T  3224515 tgtgttgttcgtagtcttgtgcgacattatttgatttcacgttttgttgcgatgttcgtttggttcatattgaaggatcaacttcagtcaatcacggatt 3224416  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatta 299  Q
    |||| ||||||||   |||||| |||||||||||||||| ||| ||||| || ||||||||||||||||||||||    
T  3224415 caattaatgattttgacgtcaa-gttgtagatccggaagaatgagtattatggtgatttagattttatcatatta 3224342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 125 - 302
Target Start/End: Complemental strand, 35665241 - 35665063
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtctt-gttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagat 223  Q
    |||||| |||||||| | ||| ||||||||||||||| | ||||| ||||||||  ||||||| ||| ||| ||||||||| ||||| || |||| ||||    
T  35665241 tgtgttattcgtcgttttgtgcgacgttgtttgatttggcgtctttgttgcggtattcgtttgattcatatcgaaagatcaacttcagtcgatcagagat 35665142  T
Q  224 tcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||||||||||||||  |||||| |||| ||| ||  ||||||| ||||| |  |||||||||||||||||||||||||    
T  35665141 tcaatcaatgatttgaacgtcaatgttgcagacccataagcatgtgtattttagtgatttagattttatcatattattt 35665063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 24770217 - 24770413
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||| | |||||||||||||||||  || ||||||   |||||| ||||||||| |||||| ||||||  ||||||||||||||||  |    
T  24770217 gtcgtctaagtgcggtgttgtgttgttcgtcgtcttatgcgacgtt---tgatttcgtgtcttgtcgcggtgttcgtttatttcttattgaaagatcggc 24770313  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||||| | |||||| |||||||||| |||||||||||| |||||| |||||||| | |||  |  || |||| ||||||||||||||| ||||    
T  24770314 atcagtcaatcacaaattcaaccaatgatttgggcgtcaacgttgaagatccagaagcatgtgaatttcggagacttaggttttatcatattattggtag 24770413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 42978581 - 42978777
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   ||||||   || || | |||||| |||||| |||||||||||||||||  |    
T  42978581 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttctcgttttatcgcggtgttcgtttagttcttattgaaagatcgac 42978677  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||| |||||||||||| ||||||||||| |||||||||  | ||| |||| |||||||||||||| |||||    
T  42978678 atcagtcaataacaaattcaaccaatgatttgggcgtcaacgttgcagatccggaaggatgggtatttcggtgacttaggttttatcatattatatgtag 42978777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 125 - 260
Target Start/End: Complemental strand, 41553884 - 41553749
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| |||||||||| |||||||| | ||||||||  |||| ||||||||||| |||||||||||||  |||| ||||||| | |||    
T  41553884 tgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaagatcaatttcagtcaatcacatatt 41553785  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccgg 260  Q
    || | |||||||||  ||||||||||| ||||||||    
T  41553784 cagttaatgatttggacgtcaacgttgcagatccgg 41553749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 9450257 - 9450061
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||| |||| ||||||||||||||||| ||| | ||||   |||||| |  | |||| |||||| | |||  |||| ||||||||||||  |    
T  9450257 gtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctac 9450161  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||||||||||||||||||| |  |||||||| ||||||||||||||||||||    
T  9450160 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtattttagtgatttaggttttatcatattatttgtag 9450061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 9977326 - 9977138
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||| ||| ||| ||||||||||||| || || ||||   |||||| | ||||||| ||||||||| ||| |||| ||||||||||||  |    
T  9977326 gtcgtctaagtgcagcgttgtattgttcgtcgtcttgtttggcgtt---tgatttcgcgtcttgtcgcggtgctcatttagttcctattgaaagatcgac 9977230  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||| ||||| | | |||||| |||||||||| |||||||||||    ||||||||  ||| ||||| |||||| |||||||||||||||||||||    
T  9977229 ttcagtcaattacaaattcaaacaatgatttgggcgtcaacgtt----atccggaattatgtgtattttgatgagttagattttatcatattattt 9977138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 115 - 267
Target Start/End: Original strand, 3394450 - 3394604
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattt--tgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcact 212  Q
    ||||||| | ||||||||||||||||| |||||  ||||||||||||  |||||||| |||||||| | |||| | || ||||||| ||||| ||||| |    
T  3394450 agtgcggtgttgtgttgttcgtcgtcttgtgtggtgttgtttgatttcgtgtgtcttcttgcggtgtttgtttagatcatattgaatgatcaacttcagt 3394549  T
Q  213 caatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg 267  Q
    |||||| | |||||||||||||||| | |||| | |||||||||||| |||||||    
T  3394550 caatcacatattcaatcaatgatttctacgtcgatgttgtagatccgaaagcatg 3394604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 45349919 - 45349723
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||| |||| ||||||||||||||| | ||||| ||||   |||||| | ||||||| |||||| |||||| |||| |||||||||||   |    
T  45349919 gtcgtctaagtgtggcgttgtgttgttcgtcgttttgtgtggcgtt---tgatttcgcgtcttgtcgcggtgttcgtttagttcctattgaaagattggc 45349823  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||  |||||||| ||| ||||| ||||||||| | |||  | |||||||| ||||||||||||||||||||    
T  45349822 atcagtcaattacaaattcaagcaatgattttggcgtcaacattgcagatctggaagcatgtgaatttcggtgatttaggttttatcatattatttgtag 45349723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 48061393 - 48061589
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||  | |||||||||||||||  || ||||||   |||||||| ||||||| |||||| | |||| |||| ||||||||||||  |    
T  48061393 gtcgtctaagtgcggcattttgttgttcgtcgtcttatgcgacgtt---tgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctac 48061489  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     | | ||||| | | |||||| ||||| |||| |||||||||||| ||||||  ||||||| |||||  | |||||||| ||||||||||||||||||||    
T  48061490 attagtcaattacaaattcaaccaatggtttgagcgtcaacgttgcagatccttaagcatgagtatttcggtgatttaggttttatcatattatttgtag 48061589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 48316932 - 48316736
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||| ||||| ||||||||||||||||| |||   ||||   |||||| | ||||||| |||||| | |||  |||| ||||||||||||  |    
T  48316932 gtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcagcgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctac 48316836  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  |||||||| || |||||||||||||||||||||  |  ||||||| ||||||||||||||||||||    
T  48316835 atcaatcaattacaaattcaagcaatgatttggacgtcaacgctgcagatccggaagcatgggtatttcggcgatttaggttttatcatattatttgtag 48316736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 12141428 - 12141233
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||| ||||||| ||| | | ||   |||||| | |||||||  ||||| | |||| |||| ||||| ||||||  |    
T  12141428 gtcgtctaagtgcggcgttttgttgtttgtcgtcttgtgcggcatt---tgatttcgcgtcttgtcacggtgtttgtttagttcctattggaagatctac 12141332  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | ||| ||||||||||||||||||||||||    
T  12141331 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttagattttatcatattatttgta 12141233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 260
Target Start/End: Complemental strand, 41554229 - 41554094
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| |||||||||| |||||||| | ||||||||  |||| ||||||||||| |||||||| ||||  |||| ||||||| | |||    
T  41554229 tgtgttgttcgtcgtcttgtgtgacgttatttgatttcgcgtcttgttatggtgttcgtttggttcatattgaaatatcaatttcagtcaatcacatatt 41554130  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccgg 260  Q
    || | |||||||||  ||||||||||| | ||||||    
T  41554129 cagttaatgatttggacgtcaacgttgcatatccgg 41554094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 13797052 - 13796853
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgt---ctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    |||||| |||||||||| |||||||||||| ||   || ||| ||||||   |||||| |||||||||  ||||| |||||| |||| ||||||||||||    
T  13797052 gtcgtctaagtgcggcgttgtgttgttcgttgtgatcttgtgcgacgtt---tgatttcgtgtcttgtctcggtgttcgtttagttcatattgaaagatc 13796956  T
Q  204 atcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
      | ||| ||||| | | | |||| ||||||||||  ||||||||||| ||||||||||||||| |||||  | ||| |||  |||||||||||||||||    
T  13796955 gacatcagtcaataacaaagtcaaccaatgatttgaccgtcaacgttgcagatccggaagcatgagtatttaggtgacttaagttttatcatattatttg 13796856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 19404877 - 19404681
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | | ||||||||||||| |||   | | |||||||||||  |||||| |||||| || ||| |||| | |||||||||   |    
T  19404877 gtcgtctaagtgcggcgttctattgttcgtcgtcttgtg---catcgtttgattttgcatcttgtcgcggtgttcttttagttcctcttgaaagattgac 19404781  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||  ||||| | | ||||||||||||||||| ||||||| |||| ||||||||||||||| |||||    ||| |||||||||||||||||||||||||    
T  19404780 atctgtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagatccggaagcatgagtatttcagtgacttagattttatcatattatttgtag 19404681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 38798752 - 38798948
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||| || || ||||||||||||||||| ||| | ||||   |||||||| || |||| || ||| | ||||  ||| ||||||||||||  |    
T  38798752 gtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgttttgtcgcagtgtttgtttatttcctattgaaagatcggc 38798848  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||| |||||||| ||| ||||||||||||||| | |||  | ||| |||||||||||||||||||||||||    
T  38798849 atcagtcaattacaaattcaaccaatgatttgggcgtcaacattgaagatccggaagcatgtgaatttcggtgacttagattttatcatattatttgtag 38798948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 152 - 306
Target Start/End: Complemental strand, 5348670 - 5348516
Alignment:
Q  152 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 251  Q
    ||||||||||   ||||| |||||||| ||||||||||| |||||||||||||  |||| ||||| | ||||||||||||||||||| ||||| ||||||    
T  5348670 tgtttgatttatcgtcttattgcggtgttcgtttggttcctattgaaagatcaatttcaatcaattacagattcaatcaatgatttgggcgtcgacgttg 5348571  T
Q  252 tagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     |||| || ||  ||| |||||    ||| ||||| |||| ||||||||||||||    
T  5348570 cagattcgaaaatatgtgtatttcagtgacttagaatttaccatattatttgtag 5348516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 114 - 306
Target Start/End: Original strand, 47590289 - 47590478
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| ||||||||||||||||| ||| | ||||   |||||||| ||||||  |||||| | || |  ||| ||||||||||||  | ||  ||    
T  47590289 aagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgtcttgccgcggtgtttgtataattcctattgaaagatctacatccgtc 47590385  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| |||||||||| |||||||||||| | ||||||||||||| |||||  |  || |||| ||||||||||||||||||||    
T  47590386 aattacaaattcaaccaatgatttgggcgtcaacgttgcacatccggaagcatgagtatttcggcgacttaggttttatcatattatttgtag 47590478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 19296841 - 19297037
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| |  | |||| |||||| | |||  |||| | ||||||||||  |    
T  19296841 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcattttgtcgcggtgtttgttcagttcctcttgaaagatctac 19296937  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | | | |||  ||||||||||||||||||||    
T  19296938 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtaacttaagttttatcatattatttgtag 19297037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 165 - 302
Target Start/End: Complemental strand, 28044821 - 28044684
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 264  Q
    ||||||| |||||| | |||  |||||||||||||||||    ||| ||||| ||| |||||| || |||||||  ||||||||||| |||||||||| |    
T  28044821 gtcttgtcgcggtgtttgttcagttcttattgaaagatctatatcaatcaattataaattcaagcattgatttgaacgtcaacgttgcagatccggaaac 28044722  T
Q  265 atgggtattctgatgatttagattttatcatattattt 302  Q
    |||||||||  | |||||||| ||||||||||||||||    
T  28044721 atgggtatttcggtgatttaggttttatcatattattt 28044684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 39171627 - 39171514
Alignment:
Q  193 attgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 292  Q
    |||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||| ||||||    
T  39171627 attgaaagatctacatcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttat 39171528  T
Q  293 catattatttgtag 306  Q
    ||||||||||||||    
T  39171527 catattatttgtag 39171514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 187 - 293
Target Start/End: Complemental strand, 1769221 - 1769115
Alignment:
Q  187 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 286  Q
    |||| |||||||| || ||||||| ||||||| |||||||||||||||||||  ||| ||||||| ||||| ||||||||| ||||| |  | |||||||    
T  1769221 gttcatattgaaaaattatcttcagtcaatcacagattcaatcaatgatttgaacgtgaacgttgcagatctggaagcatgagtattattgtaatttaga 1769122  T
Q  287 ttttatc 293  Q
    |||||||    
T  1769121 ttttatc 1769115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 8001666 - 8001474
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||||||||||| ||| | ||||   |||||| | ||||||| | |||| | |||  |||| ||||||||||||  |    
T  8001666 gtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctac 8001570  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||| ||||| |||| |||||  | ||| |||| ||||||||||||||||    
T  8001569 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagattcggaatcatgagtatttcggtgacttaggttttatcatattattt 8001474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 302
Target Start/End: Original strand, 46700061 - 46700198
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 264  Q
    ||||||| | |||| |||||| |||| |||||||| |||  | ||| ||||  | | ||||||||||||||||| || ||| ||||| ||||||||||||    
T  46700061 gtcttgtcgtggtgttcgtttagttcctattgaaatatcgacatcagtcaactacaaattcaatcaatgatttgggcatcagcgttgcagatccggaagc 46700160  T
Q  265 atgggtattctgatgatttagattttatcatattattt 302  Q
    |||| ||||  | ||| |||||||||||||||||||||    
T  46700161 atggatatttcggtgacttagattttatcatattattt 46700198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 227 - 304
Target Start/End: Original strand, 48930795 - 48930872
Alignment:
Q  227 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgt 304  Q
    |||||||||||| | |||||||||| |||||| ||| ||| ||||||||| |||||||||||| ||||||||||||||    
T  48930795 atcaatgatttgggtgtcaacgttgcagatccagaaacattggtattctggtgatttagatttcatcatattatttgt 48930872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 969557 - 969469
Alignment:
Q  120 ggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatctt 208  Q
    |||| |||||||||||||||||  || | ||||||||||||||| ||||| |||||||| | ||||||||| |||||||| ||||||||    
T  969557 ggcgttgtgttgttcgtcgtcttttgcggcgttgtttgattttgcgtcttattgcggtgtttgtttggttcatattgaaaaatcatctt 969469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 305
Target Start/End: Complemental strand, 34899727 - 34899532
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| |  | |||| |||||| | |||  |||| | ||||||||||  |    
T  34899727 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgctttttgtcgcggtgtttgttcagttcctcttgaaagatctac 34899631  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| | || ||||||||||||||||  | ||| |||  |||||||||||||||||||    
T  34899630 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcaaattcggaagcatgggtatttcggtgacttaagttttatcatattatttgta 34899532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 114 - 306
Target Start/End: Complemental strand, 25287299 - 25287110
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    ||||| |||| ||||||||||||||||| ||| ||| ||   ||||||    |||||| |||||| || |||  |||||||||||||||   | ||| ||    
T  25287299 aagtgtggcgttgtgttgttcgtcgtcttgtgcgacatt---tgatttcacatcttgtcgcggtgttcatttacttcttattgaaagattgacatcaatc 25287203  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | ||||||||||||||||| |||||||  ||  ||||| | |||||||| ||||  | ||| |||||||||||||||||||||||||    
T  25287202 aattacaaattcaatcaatgatttgagcgtcaatattacagatctgaaagcatggatatttcggtgacttagattttatcatattatttgtag 25287110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 29617781 - 29617623
Alignment:
Q  149 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtc-aac 247  Q
    ||||||||||||| | |||||||||  ||| | ||||| ||| ||||||||||||| ||| |  |||| | ||||| ||||| | |||| |||||| |||    
T  29617781 cgttgtttgatttcgcgtcttgttgtagtgtttgtttgattcgtattgaaagatcaactttagacaattacagattaaatcagtaatttatgcgtcgaac 29617682  T
Q  248 gttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| | ||  |||| ||||||||||  ||| | |||||||||||||||||||||||||    
T  29617681 gttgaaaatatggaaacatgggtatttcgatcacttagattttatcatattatttgtag 29617623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 267
Target Start/End: Complemental strand, 39328910 - 39328753
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||| ||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | ||||  ||| ||||||||||||  |    
T  39328910 gtcgtctaagtacggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgtttatttcctattgaaagatcggc 39328814  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg 267  Q
     ||| ||||| | | |||||| |||||||||| |||||||||||| ||||||| |||||||    
T  39328813 atcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaagcatg 39328753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 165 - 306
Target Start/End: Original strand, 11343836 - 11343976
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 264  Q
    |||||||||||||| | ||||||||| ||||||||||| |  |||| ||||| | | ||| ||| |||||||||  ||||||||||| |||||| |||      
T  11343836 gtcttgttgcggtgtttgtttggttcatattgaaagattaaattcagtcaattacaaatttaattaatgatttggacgtcaacgttgcagatcc-gaaaa 11343934  T
Q  265 atgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||| || ||||||| ||||||  |||||||||||||    
T  11343935 atgagtattttggtgatttatattttacaatattatttgtag 11343976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 25255241 - 25255394
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    |||||||||  ||||| ||||||||| || ||| |||| ||| ||||  ||| ||||| ||||| ||||||||||||||| ||||| || || | ||||     
T  25255241 gtttgatttcatgtctcgttgcggtgttcatttagttcctatcgaaatgtcaacttcaatcaattatagattcaatcaattatttgggcatcgatgttgc 25255340  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| |||||||||| ||| |  ||| ||||| ||||| |||| ||||||||    
T  25255341 agatcctgaagcatgggcattttagtgacttagagtttataatatcatttgtag 25255394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 115 - 210
Target Start/End: Complemental strand, 26623902 - 26623810
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    ||||||||| ||||||||||||||||| ||   |||  |||||||||||  ||||||||||||| | ||||||||| ||||||||||||| |||||    
T  26623902 agtgcggcgttgtgttgttcgtcgtcttgt---acggcgtttgattttgcatcttgttgcggtgtttgtttggttcctattgaaagatcaacttca 26623810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 30756939 - 30756747
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||  ||||||||||||  |    
T  30756939 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagtttctattgaaagatctac 30756843  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
     ||| ||||| | | |||||| |||| |||||  | ||||||||| ||||||||||||||| |||||  | ||| |||  ||||||||||||||||    
T  30756842 atcagtcaattacaaattcaaccaataatttggacatcaacgttgcagatccggaagcatgagtatttcggtgacttaagttttatcatattattt 30756747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 152 - 252
Target Start/End: Original strand, 22087330 - 22087430
Alignment:
Q  152 tgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttg 251  Q
    |||||||||| |||||||||||| ||| | ||||| | | ||||||||||||| ||||| ||||| | | ||||||||||||| ||| | ||||||||||    
T  22087330 tgtttgatttcgtgtcttgttgctgtgtttgtttgatacctattgaaagatcaacttcagtcaattacaaattcaatcaatgacttgggtgtcaacgttg 22087429  T
Q  252 t 252  Q
    |    
T  22087430 t 22087430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 183 - 302
Target Start/End: Complemental strand, 5000076 - 4999957
Alignment:
Q  183 tttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatt 282  Q
    |||||||| |||| ||| ||||  |||| ||||| | | ||||||||||| |||||  | |||||||||  |||| |||||||||  ||||||| |||||    
T  5000076 tttggttcatattaaaatatcaatttcagtcaattacaaattcaatcaattatttggacttcaacgttgctgatctggaagcatgaatattctggtgatt 4999977  T
Q  283 tagattttatcatattattt 302  Q
    || |||||||||||||||||    
T  4999976 taaattttatcatattattt 4999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 302
Target Start/End: Complemental strand, 5078421 - 5078342
Alignment:
Q  223 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||||| |||||||||  ||||||| ||| | ||||| ||||||| ||||| |||||||||||||||||||||| |||||    
T  5078421 ttcaataaatgatttggacgtcaactttgcatatccgaaagcatgagtattttgatgatttagattttatcatactattt 5078342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 13592498 - 13592423
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatat 297  Q
    |||||||||| |||||| |||||||||||| ||||||||| |||||||||||||| | | ||  ||||||||||||    
T  13592498 attcaatcaaagatttgagcgtcaacgttgcagatccggatgcatgggtattctggtcactttaattttatcatat 13592423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 255 - 302
Target Start/End: Original strand, 25068178 - 25068225
Alignment:
Q  255 atccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||    
T  25068178 atccggaagcatgggtgttttgatgatttagattttatcatattattt 25068225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 115 - 256
Target Start/End: Original strand, 27997067 - 27997205
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||  ||||||||||||| ||| |||  || |||||| ||||||  ||||||||| ||| ||||||| ||| ||||||||||||| |||   |||    
T  27997067 agtgcggcattgtgttgttcgtcatcttgtgcaacattgttttattttgcatcttgttgcagtgttcgtttgattcatattgaaagatcaactt---tca 27997163  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagat 256  Q
    || ||| ||| | ||||||||||| |||| ||||||| ||||    
T  27997164 attataaattaagtcaatgatttgggcgtgaacgttgcagat 27997205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 39229004 - 39229181
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | ||||    ||||| | ||||||||| | || ||||||||||  ||||||||||||| ||||| ||||| | |||||    
T  39229004 tgtgttgttcgtcgtcttgtgcggcgtta---gatttcgcgtcttgttgtgatg-tcgtttggtttctattgaaagatcaacttcagtcaattacagatt 39229099  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | |||| ||| ||||| |||||| ||||| ||||||||| |||||     || ||||| |||||||||| ||||||||    
T  39229100 caaccgatgacttgggcgtcgacgttgcagatctggaagcatgtgtatttcagggacttagaatttatcatataatttgtag 39229181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 299
Target Start/End: Original strand, 4530090 - 4530236
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||||| |||||||||||||| ||  || |||  | ||||||||||| ||||| ||| | | | |||||||| | |||||  |||| |||||||     
T  4530090 gtttgattttgcgtcttgttgcggtgttcaattagttactgttgaaagatcaacttcagtcagttacaaattcaatccaagatttaggcgtaaacgttgg 4530189  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatatta 299  Q
    | |||| |||||||||||||| |  | | ||||||||||||||||||    
T  4530190 atatccagaagcatgggtatttttgtaacttagattttatcatatta 4530236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 302
Target Start/End: Original strand, 5792810 - 5792959
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | |||||||  | ||| |||||| |||| ||||||||||||  | ||| ||||| | |  || |||||||||||||  |||||||||||     
T  5792810 gtttgatttcgcgtcttgtcacagtgttcgtttagttcctattgaaagatcgacatcagtcaattacaagttaaatcaatgatttggacgtcaacgttgc 5792909  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    ||||| ||||||||  | |||  ||||| ||| |||||||||||||||||    
T  5792910 agatctggaagcataagaatttcgatgacttatattttatcatattattt 5792959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 115 - 237
Target Start/End: Complemental strand, 1749266 - 1749140
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||||||||| ||| | | ||||||||||| |  ||  ||||||  || || ||||||||||| ||||||||||||| |||||    
T  1749266 agtgcgacgttgtgttgttcgtcgtcttgtgcggcattgtttgatttcgcatcctttgttgtacgatgttcgtttggttcgtattgaaagatcagcttca 1749167  T
Q  211 ctcaatcatagattcaatcaatgattt 237  Q
      |||||| | ||||||||||||||||    
T  1749166 gacaatcacaaattcaatcaatgattt 1749140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 165 - 252
Target Start/End: Complemental strand, 24610235 - 24610148
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    |||||||||||||| |||||| |||| |||| ||| ||||  |||| || |||| ||||||||||||||||||| |  ||||||||||    
T  24610235 gtcttgttgcggtgttcgtttagttcatattaaaatatcagtttcagtcgatcacagattcaatcaatgatttgggtttcaacgttgt 24610148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 17611129 - 17611206
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    |||||| |||||||||| ||| |  ||||||||||||| ||||||||||| ||| || |||| ||| |||||||||||    
T  17611129 tgtgttattcgtcgtcttgtgcggagttgtttgattttctgtcttgttgcagtgttcatttgattcatattgaaagat 17611206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 235
Target Start/End: Original strand, 5775182 - 5775301
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| |||||||||| ||||||  || | | || |||||||| | |||||||||| ||| | ||||||||| ||| |||||||||  |||| |||    
T  5775182 agtgcggcgttgtgttgttcatcgtcttatgcggcattatttgatttcgcgtcttgttgcagtgtt-gtttggttcatatcgaaagatcagattcagtca 5775280  T
Q  215 atcatagattcaatcaatgat 235  Q
    |||| | | ||||||||||||    
T  5775281 atcacataatcaatcaatgat 5775301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 20116588 - 20116664
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||   ||||| |||||||| || |||| ||| ||||||||||||    
T  20116588 tgttgttcgtcgtcttgtgcgtcgttgtttgatttaccgtcttcttgcggtgttcatttgattcatattgaaagatc 20116664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 35667303 - 35667227
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||| |||||||||  ||||| |||||||| || |||| ||| ||||||||||||    
T  35667303 tgttgttcgtcgtcttgtgcggcgttttttgattttccgtcttcttgcggtgttcatttgattcatattgaaagatc 35667227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 115 - 202
Target Start/End: Original strand, 25068061 - 25068147
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||| |||||||||||||| || ||| |  ||| ||| ||||||  ||||||||||||| |||||| |||| |||||||||||    
T  25068061 agtgcggcgttgtgttgttcgtcg-cttgtgcggtgtttttttattttgcatcttgttgcggtgttcgttttgttcctattgaaagat 25068147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 32522000 - 32521921
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 204  Q
    ||||||||||||| ||| ||| | ||||||||||||||  || |||||| |||| || |||| ||| |||||||||||||    
T  32522000 tgtgttgttcgtcatcttgtgcggcgttgtttgattttccgttttgttgtggtgttcatttgattcatattgaaagatca 32521921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 264
Target Start/End: Complemental strand, 42067052 - 42067010
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 264  Q
    |||||||||| |||||| |||||||||||| ||||||||||||    
T  42067052 attcaatcaaagatttgggcgtcaacgttgcagatccggaagc 42067010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 1448901 - 1448825
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||| | ||| | |||||||||||||   ||||| |||||||| || |||| ||| ||||||||||||    
T  1448901 tgttgttcgtcgtattgtgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 1448825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 23786581 - 23786657
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    |||||||||||||||  || | |||||||||||||   ||||| |||||||| || |||| ||| ||||||||||||    
T  23786581 tgttgttcgtcgtcttctgcggcgttgtttgatttctcgtcttcttgcggtgttcatttgattcatattgaaagatc 23786657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 34773717 - 34773793
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    |||| ||||||||||  || | |||||||||||||  |||||| |||||||| || |||| ||| ||||||||||||    
T  34773717 tgttattcgtcgtcttatgcggcgttgtttgatttcctgtcttcttgcggtgttcatttgattcatattgaaagatc 34773793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Complemental strand, 45199023 - 45198947
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaag-catgggtattctgatgatttagattttatcatat 297  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||| | | | || |||||||||||||    
T  45199023 attcaatcaaagatttgggcgtcaacgttgcagatccggaggccatggatattccggtcactttgattttatcatat 45198947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 46339060 - 46339136
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  | ||||| || |||| ||| ||||||||||||    
T  46339060 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 46339136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 6014 - 6195
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | ||||||||||||| | || ||||||||||| || |||||||| ||||||||  | | ||||| ||||||| | |||    
T  6014 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcgtattgttgcggtgttcatttggttcatattgaaatgttaacttcagtcaatcacatatt 6113  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||   ||||| |||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||    
T  6114 caatcaatgatttggatgtcaatgttgcagatccggaagcatgtgtattctggtgatttagattttatcatattatttgtag 6195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 48)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 129 - 306
Target Start/End: Complemental strand, 35921097 - 35920920
Alignment:
Q  129 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaat 228  Q
    |||||||||||||  || ||||||||||||||| | |||||||||||||| || |||| ||| |||| ||||||||  |||| ||||||| |||||||||    
T  35921097 ttgttcgtcgtcttatgagacgttgtttgatttcgcgtcttgttgcggtgttcatttgtttcctattaaaagatcaaattcaatcaatcacagattcaat 35920998  T
Q  229 caatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||  ||||||||||| |||||||||||||| | ||||||  |||||| ||||||||||||||||||||||    
T  35920997 caatgatttgaacgtcaacgttgcagatccggaagcatcgatattctagtgattttgattttatcatattatttgtag 35920920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 14211206 - 14211391
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 220  Q
    ||||||||||||||||| ||| | ||||||||||||| |  ||  ||||||  ||||| ||||||||||| ||||||||||||| |||||  |||||| |    
T  14211206 tgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcaca 14211305  T
Q  221 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     || ||||||||||||||  ||||||||||| |||||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  14211306 aatgcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtag 14211391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 28541025 - 28540830
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttgcg--gtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||||||||| ||| | ||||||||||||| |  ||  |||||| |  ||| ||||||||||| ||||||||||| | |||||    
T  28541025 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcatttgttgtgtggtgttcgtttggttcgtattgaaagattagcttca 28540926  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | ||||||||||||||||| |||||||||||| |||||| |||||||||||||| || |||||||||||| ||||||||||||||||    
T  28540925 gacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattttggtgatttagatttcatcatattatttgtag 28540830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 172 - 306
Target Start/End: Complemental strand, 2979364 - 2979230
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||||||| |||| |||||||| |||||  |||||| | ||||||||||||||||| |||||||||||| |||||| |||||| |||||    
T  2979364 tgcggtgttcgtttggttcgtattaaaagatcaacttcagacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcacgggta 2979265  T
Q  272 ttctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||||||||| ||||||||||||||||    
T  2979264 ttctggtgatttagatttcatcatattatttgtag 2979230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 108 - 306
Target Start/End: Complemental strand, 8088333 - 8088136
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| ||||||| |  |||||||||  |||||| ||| | ||||||||||||| |  ||||||||| ||| ||||| ||||| ||||||||||||| ||    
T  8088333 tcgtctaagtgcgaccttgtgttgtttatcgtcttgtgcggcgttgtttgatttggcatcttgttgcagtgttcgtt-ggttcatattgaaagatcagct 8088235  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||||| |||||||||||||||||||  ||||||||||| ||||||  || || | |||||||| ||||||||||| |||||||||||||||||    
T  8088234 tcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcagatccaaaaacaagagtattctggtgatttagattatatcatattatttgtag 8088136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 10722772 - 10722925
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||||||||||| |  ||||| |||||| |||| ||||||||||||  ||||| ||| | | | ||||||||||||||||| |||||||||||||    
T  10722772 gtttgattttgtgtcttatctcggtgttcgtttagttcctattgaaagatcgacttcagtcatttaaaaattcaatcaatgatttgggcgtcaacgttgt 10722871  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||  |||||||||||||  | ||| |||||||||||||||||||||||||    
T  10722872 agatccaaaagcatgggtatttcggtgacttagattttatcatattatttgtag 10722925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 13007197 - 13007393
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   ||||||||||| |||| |||||| | |||| |||| | ||||||||||  |    
T  13007197 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgattttgtgttttgtcgcggtgtttgtttagttcctcttgaaagatctac 13007293  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  ||||||||||||||||||||    
T  13007294 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtag 13007393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 14726581 - 14726385
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||| | ||||||||||||||||| ||| ||   |||||||||| | |||||||  ||||| | ||||  ||||||||||||||||  |    
T  14726581 gtcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcga---tgtttgatttcgcgtcttgtcacggtgttagtttatttcttattgaaagatcggc 14726485  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||||| | |||||| |||||||||| | |||||||||| ||||||||||||||| | ||| || ||| |||| ||||||||||||||||||||    
T  14726484 atcagtcaatcacaaattcaaccaatgatttgggtgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggttttatcatattatttgtag 14726385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 26878185 - 26878032
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| ||||||||| |||||| ||||||  ||  | ||||||||||  | ||| ||||| | | ||||||||||||||||| |||||||| |||     
T  26878185 gtttgatttcgtgtcttgtcgcggtgttcgtttaatttctcttgaaagatcgacatcagtcaattagatattcaatcaatgatttgggcgtcaacattgc 26878086  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| |||||||||||||| || ||| |||||||||||||||||||||||||    
T  26878085 agatccagaagcatgggtattttggtgacttagattttatcatattatttgtag 26878032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 38597765 - 38597961
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||||| | |||| | |||  |||| ||||||||||||  |    
T  38597765 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgtggtgtttgttcagttcctattgaaagatctac 38597861  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||    ||| |||| ||||||||||||||||||||    
T  38597862 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaggttttatcatattatttgtag 38597961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 39567321 - 39567434
Alignment:
Q  193 attgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 292  Q
    |||||||||||| |||||  |||||| | |||||||||||||||||  ||||||| ||| |||||| ||| ||||||||||||| |||||||||||| ||    
T  39567321 attgaaagatcagcttcagacaatcacaaattcaatcaatgatttggacgtcaacattgcagatccagaaacatgggtattctggtgatttagatttcat 39567420  T
Q  293 catattatttgtag 306  Q
    ||||||||||||||    
T  39567421 catattatttgtag 39567434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 114 - 306
Target Start/End: Complemental strand, 24229897 - 24229708
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| | ||||||||||||||| ||||||||||   |||||| | ||||||| |||||| | |||| |||| ||||||||||||  | ||| ||    
T  24229897 aagtgcggcgttttgttgttcgtcgtcttgtgtgacgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcaatc 24229801  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta-ttctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| ||||||||||  |||||| |||| |||||||| ||||||| || ||||| ||| |||| ||||||||||||||||||||    
T  24229800 aattacaaattcaagcaatgatttggacgtcaatgttgcagatccggtagcatggatatttctg-tgacttaggttttatcatattatttgtag 24229708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 10332653 - 10332471
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||| ||||||| ||| | | ||||||||||| | |||||||||| ||| | ||||| ||| ||||||||||| |   ||| ||||||| | |||    
T  10332653 tgtgttgtttgtcgtcttgtgcggcattgtttgatttcgcgtcttgttgcagtgtttgtttgattcatattgaaagattaggctcagtcaatcacatatt 10332554  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatga-tttagattttatcatattatttgtag 306  Q
    | ||| |||||||   |  |||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||| |||||||    
T  10332553 cgatcgatgatttagacaccaacgttgcagatccggaagcatgagtattctgatgattttagatttcatcatattttttgtag 10332471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 172 - 302
Target Start/End: Complemental strand, 19103525 - 19103395
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||| ||| ||| ||||||| | |||||  |||||| | ||||||||||||||||| |||||||  ||| |||||| |||||||| |||    
T  19103525 tgcggtgttcgtttgattcgtatcgaaagattagcttcagacaatcacaaattcaatcaatgatttgggcgtcaatattgcagatccagaagcatgagta 19103426  T
Q  272 ttctgatgatttagattttatcatattattt 302  Q
    ||| | |||||||||||| ||||||||||||    
T  19103425 ttccggtgatttagatttcatcatattattt 19103395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 165 - 306
Target Start/End: Original strand, 41630525 - 41630666
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 264  Q
    |||||||  ||||| |||||| |||| |||| |||||||  ||||| ||||| | | ||||||||||||||||| |||||||||||| | |||| |||||    
T  41630525 gtcttgtcacggtgttcgtttagttcctattaaaagatcgacttcagtcaattacaaattcaatcaatgatttgggcgtcaacgttgcacatccagaagc 41630624  T
Q  265 atgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| |||||    ||| |||||||||||||||||||||||||    
T  41630625 atgtgtatttccgtgacttagattttatcatattatttgtag 41630666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 154 - 305
Target Start/End: Original strand, 16758552 - 16758703
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||| | || ||||| ||||| ||||||||||| |||||||| |||    ||| |||||||||||||||||||||||||||  | |||||| | ||    
T  16758552 tttgatttcgcgttttgttacggtgttcgtttggttcatattgaaaaatctgtgtcagtcaatcatagattcaatcaatgatttgaacatcaacgctata 16758651  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    |||| | || |||| ||||||  || ||||| ||||||||||||||||||||    
T  16758652 gatctgaaaacatgagtattcaaattatttaaattttatcatattatttgta 16758703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 6216948 - 6217062
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||  | ||| ||||| | | ||||||||||||||||| |||||||||||| |||| |||||||||| |||||  | ||| ||| ||||||    
T  6216948 tattgaaagatctacatcaatcaattacaaattcaatcaatgatttgggcgtcaacgttgcagattcggaagcatgtgtatttcggtgacttaaatttta 6217047  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  6217048 tcatattatttgtag 6217062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 25980126 - 25980321
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||||||   ||||||||||||||||| ||| | ||||   | |||| | ||||||| |||||| | |||| |||| ||||||||||||| |    
T  25980126 gtcgtctaagtgcggtattgtgttgttcgtcgtcttgtgcggcgtt---taatttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatcaac 25980222  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||  | | |||||| |||||||||| ||||||| |||| |||| |||||||||||||||| |  ||| |||  ||||||||||||||||||||    
T  25980223 atcagtcaactacaaattcaaccaatgatttgggcgtcaaagttgcagattcggaagcatgggtatt-tcgtgacttaagttttatcatattatttgtag 25980321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 114 - 306
Target Start/End: Original strand, 19120885 - 19121076
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| |||||||||||||||||  || | | ||||||||||| | |||||||||||||| | ||||| ||| | ||| ||||||| ||||| ||    
T  19120885 aagtgcggcgttgtgttgttcgtcgtcttatgaggcattgtttgatttcgcgtcttgttgcggtgtttgtttgtttccttttg-aagatcagcttcagtc 19120983  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||| |||||||| ||  ||||||||| || |||||  ||| ||||  ||||  | ||| |||| ||||||||||||||||||||    
T  19120984 aattacaaattctatcaatgacttaagcgtcaacgctgcagatctagaaacatgaatatttcggtgacttaggttttatcatattatttgtag 19121076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 107 - 239
Target Start/End: Complemental strand, 38111071 - 38110939
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    ||||||| ||||| | | ||||||||| || |||| ||| | |||||||||||||||||||||||||| ||| | ||||||||| |||||||| ||||      
T  38111071 gtcgtcctagtgcagtgttgtgttgtttgttgtcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttggttcctattgaaatatcaat 38110972  T
Q  207 ttcactcaatcatagattcaatcaatgatttgt 239  Q
    || | ||||||||| | ||| ||||||||||||    
T  38110971 ttaagtcaatcataaactcagtcaatgatttgt 38110939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 114 - 306
Target Start/End: Original strand, 7930152 - 7930341
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| ||||||||||||||||| |||   ||| ||||||||| |  ||| || || ||| | |||| |||| ||| ||||||||  | ||| ||    
T  7930152 aagtgcggcgttgtgttgttcgtcgtcttgtg---cgtcgtttgatttcgcatctggtcgcagtgtttgtttagttcctatggaaagatcgacgtcagtc 7930248  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| |||||||||| ||||||| |||| ||||||||||||||| |||||  | |   |||| ||||||||||||||||||||    
T  7930249 aattacaaattcaaccaatgatttgagcgtcaatgttgcagatccggaagcatgagtatttaggtttcttaggttttatcatattatttgtag 7930341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 303
Target Start/End: Original strand, 35850767 - 35850960
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||| || || ||||||||||||||||| ||| | ||||   |||||| | || || | |||||| | ||||  ||| ||||||||||||  |    
T  35850767 gtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttatcgcggtgtttgtttatttcctattgaaagatcggc 35850863  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
     ||| ||||| | | |||||| ||||||||||||||||||||||| |||||| |||||||| | |||  | ||| |||| |||||||||||||||||    
T  35850864 atcagtcaattacaaattcaaccaatgatttgtgcgtcaacgttgaagatccagaagcatgtgaatttcggtgacttaggttttatcatattatttg 35850960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 38007369 - 38007522
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| |||| |||| |||||| | ||||  ||| ||||||||||||  | ||| ||||| | | ||| || ||||||||||  |||||||||||     
T  38007369 gtttgatttcgtgttttgtcgcggtgtttgtttatttcctattgaaagatcggcatcagtcaattacaaatttaaccaatgatttggacgtcaacgttga 38007468  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||| | |||  | ||| |||| ||||||||||||||||||||    
T  38007469 agatccggaagcatgtgaatttcggtgaattaggttttatcatattatttgtag 38007522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 306
Target Start/End: Complemental strand, 6012257 - 6012062
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||| | ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| |||| |||||||  |     
T  6012257 tcgtctaagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctattaaaagatctaca 6012161  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||| | | |||||| ||||||||||  |||||| ||||||||||||||||||||||||||    ||| |||  ||| ||||||||||||||||    
T  6012160 tcagtcaattacaaattcaaccaatgatttggacgtcaatgttgtagatccggaagcatgggtatttcagtgacttaagtttgatcatattatttgtag 6012062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 226 - 306
Target Start/End: Original strand, 7036303 - 7036383
Alignment:
Q  226 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||||| |||||||||||| ||||||| |||||||||||||  || || ||||||||||||||||| |||||||    
T  7036303 aatctatgatttgggcgtcaacgttgcagatccgaaagcatgggtatttcgaggacttagattttatcatattgtttgtag 7036383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 154 - 302
Target Start/End: Original strand, 34945405 - 34945553
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||| | || |||| |||||| | |||  |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||||||||||| |    
T  34945405 tttgatttcgcgttttgtcgcggtgtttgttcagttcctattgaaagatctacatcagtcaattacaaattcaaccaatgatttggacgtcaacgttgca 34945504  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    ||||||||||||||||||||  | ||| |||  ||||||||||||||||    
T  34945505 gatccggaagcatgggtatttcggtgacttaagttttatcatattattt 34945553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 9113845 - 9113649
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||||||||||| ||| | ||||   ||||||   || |||| |||||| | |||  |||| | ||||||||||  |    
T  9113845 gtcgtctaagtgcggcgttctgttgttcgtcgtcttgtgcggcgtt---tgatttcacgttttgtcgcggtgtttgttcagttcctcttgaaagatctac 9113749  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||| | ||||  | ||| |||  ||||||||||||||||||||    
T  9113748 atcagtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatagatatttcggtgacttaagttttatcatattatttgtag 9113649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 14082393 - 14082320
Alignment:
Q  233 gatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| || ||||||||| |||||||||||||||||||||   |||| |||| ||||||||||||||||||||    
T  14082393 gatttgggcatcaacgttgcagatccggaagcatgggtatttcaatgacttaggttttatcatattatttgtag 14082320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 31391873 - 31391677
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||||| || |||||||||| |||||| ||| | | ||   |||||| |  |||||| || ||| | |||| ||| |||||||||||||  |    
T  31391873 gtcgtctaagtgcgacgttgtgttgttcttcgtcttgtgcggcatt---tgatttcgcatcttgtcgcagtgtttgtttagtttttattgaaagatcggc 31391777  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||| |||||||||||| |||||| |||| ||| |||||  | ||| |||| |||||||||||||| |||||    
T  31391776 atcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccagaaggatgagtatttcggtgacttaggttttatcatattatatgtag 31391677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 187 - 306
Target Start/End: Original strand, 13421978 - 13422097
Alignment:
Q  187 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 286  Q
    |||| ||||||||||||  | ||| ||||| | | ||||||||||||||||| ||||||| |||| |||| | |||||||| |||||  | ||| ||| |    
T  13421978 gttcctattgaaagatcgacatcagtcaattacaaattcaatcaatgatttgggcgtcaatgttgcagattctgaagcatgtgtatttcggtgacttata 13422077  T
Q  287 ttttatcatattatttgtag 306  Q
    |||||||||||||| |||||    
T  13422078 ttttatcatattatatgtag 13422097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 266
Target Start/End: Complemental strand, 8985049 - 8984919
Alignment:
Q  132 ttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaa 231  Q
    |||||||||| ||||||| ||||||||||  | ||||||||||| || ||||||| ||| ||||    ||||| ||| | ||||||| | || ||||| |    
T  8985049 ttcgtcgtcttgtgtgacattgtttgattccgcgtcttgttgcgctgttcgtttgtttcatatt----gatcagctttagtcaatcacatatacaatcga 8984954  T
Q  232 tgatttgtgcgtcaacgttgtagatccggaagcat 266  Q
    |||||||  || |||||||| ||||||||||||||    
T  8984953 tgatttggacgacaacgttgcagatccggaagcat 8984919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 11977055 - 11976859
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||| |||| ||| ||||||||||||| ||  ||||||   |||||| | ||||||| |||||| | ||||  ||  |||||| |||||  |    
T  11977055 gtcgtctaagtgtggcgttgtattgttcgtcgtcttgtacgacgtt---tgatttcgcgtcttgtcgcggtgtttgtttattttctattgagagatcggc 11976959  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||| ||||||| ||||| ||||||||| | |||  | ||| |||| ||||||||||||||||||||    
T  11976958 atcagtcaattacaaattcaaccaatgatttggacgtgaacgttgaagatctggaagcatgtgaatttcggtgacttaggttttatcatattatttgtag 11976859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 222 - 302
Target Start/End: Original strand, 15571566 - 15571646
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta-ttctgatgatttagattttatcatattattt 302  Q
    ||||||||||||||||| | |||||||||| ||||||||||||||| ||| ||| | ||| ||| |||||||||||||||||    
T  15571566 attcaatcaatgatttgggtgtcaacgttgcagatccggaagcatgagtagttcag-tgacttaaattttatcatattattt 15571646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 37986225 - 37986105
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| |||||||||| |||||| ||| | ||||   |||||| |  ||||||||||| | ||||||| ||||||||||||||||| |||   |||    
T  37986225 agtgcggcgttgtgttgttcatcgtcttgtgcggcgtt---tgatttcgcatcttgttgcggcgttcgtttgattcttattgaaagatcaacttttgtca 37986129  T
Q  215 atcatagattcaatcaatgatttg 238  Q
     | | |||||||||||||||||||    
T  37986128 tttacagattcaatcaatgatttg 37986105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 20257685 - 20257633
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    |||||||||| |||||| ||||||||||||||||||||||| | |||||||||    
T  20257685 attcaatcaaagatttgcgcgtcaacgttgtagatccggaaacgtgggtattc 20257633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 180 - 303
Target Start/End: Original strand, 1409536 - 1409659
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    |||||| |||| |||| |||||||  | ||| ||||| | | |||||||||||||||| |||||||| |||| ||||||| || ||||  |||| |  ||    
T  1409536 tcgtttagttcatattaaaagatcgacatcaatcaattacaaattcaatcaatgatttatgcgtcaatgttgcagatccgaaaacatgaatattttagtg 1409635  T
Q  280 atttagattttatcatattatttg 303  Q
    | |||||||| |||||||||||||    
T  1409636 acttagatttaatcatattatttg 1409659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 7613131 - 7613053
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||||| |||  | ||||||||||||   |||||||||||||| || |||| ||| ||||||||||||    
T  7613131 tgtgttgttcgtcgtcttgtgcaatgttgtttgatttctcgtcttgttgcggtgttcatttgattcatattgaaagatc 7613053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 114 - 273
Target Start/End: Complemental strand, 11074013 - 11073857
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||| ||| ||| ||||||||||||| ||| | ||||   |||||| | ||||||| |||||| | |||  |||| |||||||| |||  | ||| ||    
T  11074013 aagtgcagcgttgttttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaatatctacatcaatc 11073917  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtatt 273  Q
    ||| | | |||||| ||||||||||  ||||||||||  ||||||| |||||||||||||    
T  11073916 aattacaaattcaagcaatgatttggacgtcaacgttacagatccgaaagcatgggtatt 11073857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 18677536 - 18677460
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| ||||||||||||||||  |||||  | ||||| || |||| ||| ||||||||||||    
T  18677536 tgttgttcgtcgtcttgtgggacgttgtttgattttccgtcttcgtacggtgttcatttgattcatattgaaagatc 18677460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 273
Target Start/End: Original strand, 11192459 - 11192510
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtatt 273  Q
    ||||||| ||||||||| | ||||||||||||||||||||| |||| |||||    
T  11192459 attcaataaatgatttgggtgtcaacgttgtagatccggaaacatgagtatt 11192510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 202
Target Start/End: Complemental strand, 36344562 - 36344487
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||||||||| ||| | ||||||||||||||  || || |||||||| || |||| ||| |||||||||||    
T  36344562 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtttttttgcggtgttcatttgattcatattgaaagat 36344487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 127 - 169
Target Start/End: Original strand, 42579896 - 42579938
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtctt 169  Q
    ||||||||||||||| ||| |||||||||||||||| ||||||    
T  42579896 tgttgttcgtcgtcttgtgcgacgttgtttgattttctgtctt 42579938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 194
Target Start/End: Original strand, 13468612 - 13468677
Alignment:
Q  129 ttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttat 194  Q
    |||||| |||||| ||||||||||| |||||||   |||||||| ||||| || ||||||||||||    
T  13468612 ttgttcatcgtcttgtgtgacgttgcttgatttctagtcttgtttcggtgttcatttggttcttat 13468677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 114 - 203
Target Start/End: Original strand, 16981285 - 16981374
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    |||||||| | | ||||||||||||||| ||| | | |||||| |||||  ||||| |||||||| || |||| ||| ||||||||||||    
T  16981285 aagtgcggtggtttgttgttcgtcgtcttgtgcggcattgtttaattttccgtcttcttgcggtgttcctttgattcatattgaaagatc 16981374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 202
Target Start/End: Original strand, 19349680 - 19349757
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||||||||||| ||| | |||| ||||||||   |||| |||||  || ||||||||||| |||||||||||    
T  19349680 tgtgttgttcgtcgtcttgtgcggcgttatttgatttcacgtctagttgcaatgttcgtttggttcctattgaaagat 19349757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 34881726 - 34881803
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatca 204  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| |||||||||||||    
T  34881726 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagatca 34881803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 26578260 - 26578336
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| |||||||||||||||   |||||  ||| ||| || |||| ||| ||||||||||||    
T  26578260 tgttgttcgtcgtcttgtgcgacgttgtttgatttcccgtcttcgtgcagtgttcatttgattcatattgaaagatc 26578336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 41184511 - 41184435
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  || |||| ||||||| ||| ||||||||||||    
T  41184511 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtcttcgtgtggtgttcgtttgattcatattgaaagatc 41184435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 88; Significance: 3e-42; HSPs: 50)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 30493507 - 30493698
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||| | ||||||||||||||||| |||   ||||||||||||| || |||||||  |||| ||||||||||| ||||||||||||| ||||| |||    
T  30493507 agtgcggtgttgtgttgttcgtcgtcttgtgcagcgttgtttgatttcgtatcttgttctggtgttcgtttggttcatattgaaagatcaacttcagtca 30493606  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||  | |||||||||||||||||  ||||||||||| | ||||||||||||||||||| || ||||||| |||||||||| || |||||||    
T  30493607 atctcatattcaatcaatgatttggacgtcaacgttgcaaatccggaagcatgggtattttggtgatttatattttatcatgttgtttgtag 30493698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 120 - 300
Target Start/End: Complemental strand, 1933802 - 1933622
Alignment:
Q  120 ggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcat 219  Q
    |||| ||||||| | ||||||| ||| | | |||||||||||||||||| ||||||||| | ||||||||| |||  |||||||| ||||| |||||||     
T  1933802 ggcgttgtgttgctagtcgtcttgtgcggcattgtttgattttgtgtctggttgcggtgtttgtttggttcatatcaaaagatcaacttcaatcaatcac 1933703  T
Q  220 agattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattat 300  Q
    |||||||||||||||||||  ||||||||||| |||||||||| ||||  ||||||| ||||||| |||||||||||||||    
T  1933702 agattcaatcaatgatttggacgtcaacgttgcagatccggaaacatgattattctggtgatttatattttatcatattat 1933622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 528473 - 528274
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||||||||||| || |||||| || ||| ||| ||| | |||||||||||||||||||||||||| ||| | |||| |||||||| ||||||||| |    
T  528473 gtcgtccaagtgcgacgttgtgttatttgtcatcttgtgcggcgttgtttgattttgtgtcttgttgcagtgtttgtttcgttcttatcgaaagatcagc 528374  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| | ||| | | ||| ||||||| ||||| |||||||||||| |||| | |||| ||  |||||||  |||||||||||||||||||||||||||||    
T  528373 ttcagtaaattacatatttaatcaattatttgggcgtcaacgttgcagattctgaagtataagtattctagtgatttagattttatcatattatttgtag 528274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 546001 - 546197
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg--tgtcttgttg--cggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || || |||||||||||||| ||| |||||||||||||||    | | ||||||  ||||| ||||||||||| ||||||||||||| |||||    
T  546001 agtgcgacgttgcgttgttcgtcgtcttgtgcgacgttgtttgatttcacattttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttca 546100  T
Q  211 ctcaatcataga-ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | | |||||||||||||||| |||||||||||| |||||| ||||||||||||||||| || ||||||||| ||||||||||||||||    
T  546101 gacaatcacaaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggtattctggtggtttagatttcatcatattatttgtag 546197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 8102707 - 8102892
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 220  Q
    |||||| |||||||||| ||| | ||||||||||||| |  |||| |    ||||||| | ||||||||| ||||||||||||| |||||  |||||| |    
T  8102707 tgtgtttttcgtcgtcttgtgcggcgttgtttgatttcgcatcttttgttgtgcggtgtttgtttggttcgtattgaaagatcagcttcagacaatcaca 8102806  T
Q  221 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||||| ||||||||||| |||||||||||| |||||| ||| ||||  |||||||||||||||||||||||||||||||||||||    
T  8102807 aattcattcaatgatttgggcgtcaacgttgcagatccagaaacatgaatattctgatgatttagattttatcatattatttgtag 8102892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 14801808 - 14801993
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 220  Q
    ||||||||||||||||| ||| | || ||||||||||||| |||| |    ||| ||| ||||||||||| ||||||||||| | |||||  |||||| |    
T  14801808 tgtgttgttcgtcgtcttgtgcggcgctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcaca 14801907  T
Q  221 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||||||||||||||||| |||||||||||| |||||| |||| ||| ||||| || |||||||||||| ||||||||||||||||    
T  14801908 aattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattttggtgatttagatttcatcatattatttgtag 14801993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 115 - 302
Target Start/End: Complemental strand, 26588587 - 26588400
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||| | ||||||| | ||||||| ||| | |||||||||||||   |||||||||||||| ||||||||||| ||||||||||||| ||||| |||    
T  26588587 agtgcggagttgtgttgattgtcgtcttgtgcggcgttgtttgatttcccgtcttgttgcggtgttcgtttggttcatattgaaagatcaacttcagtca 26588488  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||| | ||||||| |||||||||   |||||||||| | |||| |||||||| |||||  | |||||| ||||||||||||||||||    
T  26588487 atcacacattcaattaatgatttggatgtcaacgttgcaaatccagaagcatgagtatttgggtgattttgattttatcatattattt 26588400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 34185808 - 34185617
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||  |||| |||| ||||||| ||||||||||||||||||||| ||||||||| |||| || ||| |||| ||||||||||||| |||||        
T  34185808 agtgcggcattgtgctgtttgtcgtcttgtgtgacgttgtttgattttgcgtcttgttgtggtgttcttttagttcatattgaaagatcaacttcaggtg 34185709  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||   |||||||||||||||||  ||||||| ||| | | |  ||| ||||||||||||| |||||||||||||||||||||||||||||    
T  34185708 atcacgaattcaatcaatgatttggacgtcaactttgcaaaactagaatcatgggtattctggtgatttagattttatcatattatttgtag 34185617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 108 - 306
Target Start/End: Original strand, 23128589 - 23128784
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||||| ||||||||||||||||| ||||| ||||   |||||| | || |||| || ||| | |||  |||||||||||||||||| |     
T  23128589 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgttttgtcgcagtgtttgttcagttcttattgaaagatcaaca 23128685  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||| | | |||||||||||||||||   ||||||||||||||||||||||||||||||||  | ||| |||  ||||||||||||||||||||    
T  23128686 tcagtcaattacaaattcaatcaatgatttggatgtcaacgttgtagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtag 23128784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 29255547 - 29255370
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| |||  ||   |||||| |||||||||| | |||||| |||||| |||| |||||||||||| || ||| ||||| | | |||    
T  29255547 tgtgttgttcgtcgtcttgtgcaac---gtttga-tttgtgtcttatcgcggtgttcgtttagttcctattgaaagatcttcatcagtcaattacaaatt 29255452  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||| |||||||||||  |||||||||| ||||||||||  | ||| |||||||||||||||||||||||||    
T  29255451 caatcaatgatttgggcgtcaacgttacagatccggaaacatgggtatttcggtgacttagattttatcatattatttgtag 29255370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 31296795 - 31296986
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| |||||||||| || ||| ||| | |||||||||||||||  ||||||||| ||| || |||| ||| |||||||| ||||  |||| |||    
T  31296795 agtgcggcgttgtgttgttcatcatcttgtgcggcgttgtttgattttgcatcttgttgcagtgttcatttgattcatattgaaaaatcagtttcagtca 31296894  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||  | |||||||  |||||||   ||||||||||| ||||||||||||||| |||||||| ||||||| ||||||||||||| |||||||    
T  31296895 atccaatattcaattgatgatttagacgtcaacgttgcagatccggaagcatgagtattctggtgatttatattttatcatattgtttgtag 31296986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 172 - 306
Target Start/End: Original strand, 1523440 - 1523574
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||||||| |||||||| |||| ||| |  |||||  |  ||||||||||||||||  ||||||||||| |||||| ||||||||||||    
T  1523440 tgcggtgttcgtttggttcgtattgaaatatcagcttgagacaatctcaacttcaatcaatgatttgaacgtcaacgttgcagatccagaagcatgggta 1523539  T
Q  272 ttctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||||||||||||||||||||||||||    
T  1523540 ttctggtgatttagattttatcatattatttgtag 1523574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 127640 - 127835
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||| ||| ||||||||||||||||| ||||||| ||   |||||| | || |||| |||||| || ||| |||| ||||||||||||  |    
T  127640 gtcgtctaagtgcagcgttgtgttgttcgtcgtcttgtgtgacatt---tgatttcgcgt-ttgtcgcggtgttcatttagttcctattgaaagatcgac 127735  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||| |||||||||||| |||||||||||| |||| |||||||||| |||||  | |||||||||||||||||||||||||||||    
T  127736 atcagtcaattacaaattcgatcaatgatttgggcgtcaacgttgcagattcggaagcatgagtatttcggtgatttagattttatcatattatttgtag 127835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 148 - 305
Target Start/End: Original strand, 9380031 - 9380188
Alignment:
Q  148 acgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaac 247  Q
    ||||| ||||||||   ||||||||||| || | ||||||| |||||||||||| ||  || | ||||||| |  |||||||||||||||||| |||||     
T  9380031 acgttctttgatttcacgtcttgttgcgatgattgtttggtacttattgaaagaccaattttagtcaatcacatgttcaatcaatgatttgtgtgtcaat 9380130  T
Q  248 gttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||    
T  9380131 gttgtagattcagaagcatgggtattttggtgatttagattttatcatattatttgta 9380188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 119 - 298
Target Start/End: Original strand, 28981156 - 28981335
Alignment:
Q  119 cggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 218  Q
    ||||| |||||||||||||||||  || |  ||||||||||||||| |||||||| |||| ||||||||||| |||| |||||| |  || | |||||||    
T  28981156 cggcgttgtgttgttcgtcgtcttctgcggtgttgtttgattttgtatcttgttgtggtgttcgtttggttcatattcaaagattagttttagtcaatca 28981255  T
Q  219 tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt 298  Q
     |||||||||||||||| |   ||||||| ||| ||||||| ||| ||||||||| || | |||||||||||||||||||    
T  28981256 cagattcaatcaatgatcttgacgtcaacattgcagatccgaaagtatgggtattttggtcatttagattttatcatatt 28981335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 3913694 - 3913498
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| |||  |||||   |||||| | ||||||| |||||| | |||  |||| ||||||||||||  |    
T  3913694 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcaacgtt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctac 3913598  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||   ||||||||||| |||||| ||||||||||||||  | |||||||| ||||||||||||||||||||    
T  3913597 atcaatcaattacaaattcaagcaatgatttagacgtcaacgttgcagatccagaagcatgggtatttcggtgatttaggttttatcatattatttgtag 3913498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 32191851 - 32191654
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| |||||||||||| | || ||||| ||||||||| ||| || | ||||| ||||| || |||||||| | |||||| |  | |    
T  32191851 gtcgtctaagtgcggcgttgtgttgttcgttgacttgtgtggcgttgtttggtttcgtatattgtttcggtgttcatttggttcatcttgaaaaa--agc 32191754  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| ||||||| | |||||||||||||||||  || |||||||| | ||||| ||||||| | |||||| |||||||||||||||||||  ||||||||    
T  32191753 ttcagtcaatcacatattcaatcaatgatttggacgccaacgttgcatatccgaaagcatgagcattctggtgatttagattttatcatacaatttgtag 32191654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 126 - 301
Target Start/End: Original strand, 679095 - 679270
Alignment:
Q  126 gtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattc 225  Q
    |||||||||||| |||  || | ||| ||||  ||||| ||||||||| |||  |||||||||| |||||||||| |||  |||| ||||||| | ||||    
T  679095 gtgttgttcgtcatcttatgcggcgtagtttagttttgcgtcttgttgtggtattcgtttggtttttattgaaaggtcagtttcagtcaatcacatattc 679194  T
Q  226 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
    ||||||||||||| ||| |||| ||| | ||| |||||||||  |||||||| |||||||||||||||||||||||    
T  679195 aatcaatgatttgagcgccaactttgcaaatctggaagcatgaatattctgacgatttagattttatcatattatt 679270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 187 - 306
Target Start/End: Original strand, 30776710 - 30776829
Alignment:
Q  187 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 286  Q
    |||| ||||||||||||| |||||  |||||| | ||||| ||||||||||| |||| ||||||| | |||  ||||||||||||||||| |||||||||    
T  30776710 gttcgtattgaaagatcagcttcagacaatcacaaattcattcaatgatttgggcgtgaacgttgcaaatctagaagcatgggtattctggtgatttaga 30776809  T
Q  287 ttttatcatattatttgtag 306  Q
    ||||||||||||||||||||    
T  30776810 ttttatcatattatttgtag 30776829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 192 - 302
Target Start/End: Complemental strand, 31852231 - 31852121
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||| ||||| |||| || ||||| |||||||||||||  |||||| |||| ||||||||||||||| |||||||| ||||||| ||||||    
T  31852231 tattgaaagatcaacttcagtcaaccacagattaaatcaatgatttgaacgtcaaagttgcagatccggaagcatgagtattctggtgatttaaatttta 31852132  T
Q  292 tcatattattt 302  Q
    |||||||||||    
T  31852131 tcatattattt 31852121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 296
Target Start/End: Complemental strand, 7976282 - 7976121
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | |||| ||| ||| || ||||||||| |||| |||||| |||| |||| ||||||||          |||| |||||    
T  7976282 tgtgttgttcgtcgtcttgtgcggcgttttttaattatgcgtcttgttgtggtgttcgtttagttcatattaaaagatca----------atcacagatt 7976193  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcata 296  Q
    |||| ||| |||||  |||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  7976192 caattaattatttggacgtcaacgttgtagatccggaagcatgggtattctggtgatttaaattttatcata 7976121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 303
Target Start/End: Original strand, 3355088 - 3355280
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||| | ||||||||||||| ||| ||||||||||   |||||| | ||||||||| |||| |||||| |||| ||||||||| ||  |     
T  3355088 tcgtctaagtgcggtgttgtgttgttcgtcctcttgtgtgacgtt---tgatttcgcgtcttgttgtggtgttcgtttagttcctattgaaaggtcgaca 3355184  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    ||| ||||| ||| ||||||| |||||||||  ||||||| ||| ||||||||||||||| |||||    ||| |||||||||||| |||| ||||    
T  3355185 tcagtcaattataaattcaatgaatgatttggacgtcaactttgcagatccggaagcatgagtatttcagtgacttagattttatcctattgtttg 3355280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 34018530 - 34018726
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||| |||| ||||||||||||||||| ||| ||||||   ||||||  |||||||| |||||| |||||| |||| ||||||||||||       
T  34018530 gtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgagacgtt---tgatttcatgtcttgtcgcggtgttcgtttagttcctattgaaagatcgag 34018626  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| | ||| | | ||||||  ||||||||| |||||||||||| ||||||||||||||| |||||    ||| |||  ||||||||||||||||||||    
T  34018627 atcagttaattacaaattcaactaatgatttgggcgtcaacgttgcagatccggaagcatgagtatttcagtgacttatgttttatcatattatttgtag 34018726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 7515322 - 7515126
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||||||||||| | | ||||||   |||||| | ||||||| |||||| | |||| |||| ||||| || |||  |    
T  7515322 gtcgtctaagtgcggcgttttgttgttcgtcgtcttgggcgacgtt---tgatttcgcgtcttgtcgcggtgtttgtttagttcctattggaatatctac 7515226  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||||||||| | | |||||| |||||||||  |||||||||||| | ||||||||||||| ||||   | ||| |||| ||||||||||||||||||||    
T  7515225 atcactcaattacaaattcaaccaatgatttaggcgtcaacgttgcaaatccggaagcatgtgtatgtcggtgacttaggttttatcatattatttgtag 7515126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 12170481 - 12170634
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | ||||||| |||||| | |||  |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||   ||||||||||     
T  12170481 gtttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttggatgtcaacgttgc 12170580  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||||||||  | |||||||| ||| ||||||||||||||||    
T  12170581 agatccggaagcatgggtatttcggtgatttaggtttgatcatattatttgtag 12170634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 30894613 - 30894765
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | ||||||  |||||| |||||| |||| ||||||||||||  | ||| ||||| | | |||||| |||||||||| |||||||||||      
T  30894613 gtttgatttcgcgtcttgccgcggtgttcgtttagttcatattgaaagatcgacatcagtcaattacaaattcaaccaatgatttgggcgtcaacgttac 30894712  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||| ||||||  ||||| |||| ||||||||||||||||||||    
T  30894713 agatccagaagcat-ggtatttcgatgaattaggttttatcatattatttgtag 30894765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 33053288 - 33053092
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| | ||||||||||  |    
T  33053288 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctac 33053192  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||    ||| |||  ||||||||||||||||||||    
T  33053191 atcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcagatccggaagcatgggtatttcagtgacttaagttttatcatattatttgtag 33053092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 182 - 300
Target Start/End: Complemental strand, 27097690 - 27097572
Alignment:
Q  182 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgat 281  Q
    ||||| ||| ||||||||||| |  || | |||||||||||||||||||||||||||  ||||||| ||| | ||||| || ||||| |||| || ||||    
T  27097690 gtttgattcatattgaaagattagttttagtcaatcatagattcaatcaatgatttggacgtcaacattgcaaatccgaaaacatggatattttggtgat 27097591  T
Q  282 ttagattttatcatattat 300  Q
    |||||||||||||||||||    
T  27097590 ttagattttatcatattat 27097572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 606174 - 606370
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||| ||| ||| | ||||   |||||| |  | |||| |||||| | |||  |||| ||||||||||||  |    
T  606174 gtcgtctaagtgcggcgttgtgttgttcgtcatcttgtgcggcgtt---tgatttcgcattttgtcgcggtgtttgttcagttcctattgaaagatctac 606270  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| ||| |||||| ||||||||||  | ||||||||| |||||||||| ||||||||||  | ||| |||  ||||||||||||||||||||    
T  606271 atcagtcaattataaattcaaccaatgatttggacatcaacgttgcagatccggaaacatgggtatttcggtgacttaagttttatcatattatttgtag 606370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 154 - 302
Target Start/End: Complemental strand, 4010587 - 4010440
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||||| ||| ||||||| || | ||||| ||| |||||||||||||| | || ||||| | | ||||||||||||||||| | ||  |||||| |    
T  4010587 tttgattttgcgtcatgttgcgatgtttgtttgattcctattgaaagatcatat-caatcaattacatattcaatcaatgatttgggtgttgacgttgca 4010489  T
Q  254 gatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||||||||||||| |||||  | ||| ||||| |||||||||||||||    
T  4010488 gatccggaagcatgagtatttcggtgacttagaatttatcatattattt 4010440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 219 - 302
Target Start/End: Original strand, 29743076 - 29743159
Alignment:
Q  219 tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    ||||||||||||||||  || |||||||||||| ||||||||||||  | |||||||| |||||||||| ||||||||||||||    
T  29743076 tagattcaatcaatgacgtgggcgtcaacgttgcagatccggaagctagagtattctggtgatttagatcttatcatattattt 29743159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 114 - 306
Target Start/End: Complemental strand, 32327330 - 32327141
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| |  ||   ||  ||||||||||||  | ||| ||    
T  32327330 aagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttattcaatttctattgaaagatctacatcaatc 32327234  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| |||||||||   ||| ||||||| ||||||||||||||| ||| | || |||||||| ||||||||||||||||||||    
T  32327233 aattacaaattcaagcaatgattttgacgttaacgttgcagatccggaagcatgagtagtttggtgatttaggttttatcatattatttgtag 32327141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 29319998 - 29319806
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||| |||  || | ||||   |||||| | ||||||| |||||| | |||   ||| ||||||||||||  |    
T  29319998 gtcgtctaagtgcggcgttgtgttgttcgtcctcttatgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgttaacttcatattgaaagatctac 29319902  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| | ||||||||||||| ||||| || ||| |||  ||||||||||||||||    
T  29319901 atcagtcaattacaaattcaaccaatgatttgaacgtcaacgttgcaaatccggaagcatgtgtattttggtgacttaagttttatcatattattt 29319806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 30608616 - 30608439
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||||||||||| ||| | ||||   |||||||| || |||| || ||| || ||| |||| ||||||||||||  | | | ||||| | | |||    
T  30608616 tgtgttgttcgtcgtcttgtgcggcgtt---tgattttgcgt-ttgtcgctgtgttcatttagttcctattgaaagatcgacataagtcaattacaaatt 30608521  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| |||||||||| | |||||||||| ||||| |||| ||||||||||  | ||| ||| |||||||||||||||||||||    
T  30608520 caaccaatgatttgggtgtcaacgttgcagatctggaatcatgggtatttcggtgacttatattttatcatattatttgtag 30608439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 154 - 303
Target Start/End: Original strand, 34222812 - 34222958
Alignment:
Q  154 tttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgta 253  Q
    |||||||| ||||||||||| |||  || |||||||| || |||||||||| ||||| |||||||| |||||||      |||||  |||||| |||| |    
T  34222812 tttgatttcgtgtcttgttgtggttttcatttggttcataatgaaagatcaacttcattcaatcatggattcaa------atttggacgtcaaagttgca 34222905  T
Q  254 g---atccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    |   |||||||||| || ||||||||  |||||||||||||||||||||||||    
T  34222906 gcagatccggaagcctgtgtattctggcgatttagattttatcatattatttg 34222958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 222 - 304
Target Start/End: Original strand, 8266717 - 8266799
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgt 304  Q
    ||||||||||||||||| |||||||| ||||||| ||||| ||| ||||||||  || | ||  |||||||||||||||||||    
T  8266717 attcaatcaatgatttgggcgtcaacattgtagacccggaggcaagggtattccaatcactttaattttatcatattatttgt 8266799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 20225903 - 20226017
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||| ||||||| ||||| ||| | | | ||||||||||||||||  ||| | |||||| |||| | |||||||| |||||  ||||| ||||| ||||    
T  20225903 tattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagttagaattta 20226002  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  20226003 tcatattatttgtag 20226017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 22119887 - 22120001
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||| ||||||| ||||| ||| | | | ||||||||||||||||  ||| | |||||| |||| | |||||||| |||||  ||||| ||||| ||||    
T  22119887 tattggaagatcaacttcattcagttacaaattcaatcaatgattttggcgccgacgttgcagattctgaagcatgagtatttcgatgagttagaattta 22119986  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  22119987 tcatattatttgtag 22120001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 178
Target Start/End: Complemental strand, 33543693 - 33543640
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtg 178  Q
    ||||||||||||||||| ||| | |||||||||||||| |||||||||||||||    
T  33543693 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttctgtcttgttgcggtg 33543640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 17346632 - 17346522
Alignment:
Q  126 gtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattc 225  Q
    |||||||||||||||| |||||| ||||||||||||  | | ||| |||  || || |||||||| || |||||||||  | ||||||||| |  |||||    
T  17346632 gtgttgttcgtcgtcttgtgtgatgttgtttgatttcttattttggtgcaatgttcatttggttcctaatgaaagatcgacatcactcaattagtgattc 17346533  T
Q  226 aatcaatgatt 236  Q
    |||||||||||    
T  17346532 aatcaatgatt 17346522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 116 - 186
Target Start/End: Original strand, 19164687 - 19164757
Alignment:
Q  116 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttg 186  Q
    |||||||| ||||||||| ||||||| ||| ||  ||||||||||||||||| ||||| |||| |||||||    
T  19164687 gtgcggcgttgtgttgtttgtcgtcttgtgcgaaattgtttgattttgtgtcatgttgtggtgatcgtttg 19164757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 22571459 - 22571533
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaa 199  Q
    ||||||||||||||||| ||| | ||||||||||||||| || |||||  |||| ||||||||||  ||||||||    
T  22571459 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttgcgttttgttatggtgttcgtttggttaatattgaaa 22571533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 25337574 - 25337652
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||||| | | |  |||||||||||||  |||||||||||||| || |||| ||| ||||||||||||    
T  25337574 tgtgttgttcgtcgtcttgcgcggtgttgtttgatttttcgtcttgttgcggtgttcatttgattcatattgaaagatc 25337652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 6957203 - 6957316
Alignment:
Q  193 attgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttat 292  Q
    ||||| |||||  ||||| ||||| | ||||||||||||||||||  || |||||||||||||| || ||  |||| |||||  |||| ||| |||||||    
T  6957203 attgatagatcgacttcagtcaataacagattcaatcaatgatttaggcatcaacgttgtagattcgaaaatatggatattccaatgacttatattttat 6957302  T
Q  293 catattatttgtag 306  Q
    || || ||||||||    
T  6957303 cacatgatttgtag 6957316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 8196397 - 8196358
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccgga 261  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  8196397 attcaatcaacgatttgggcgtcaacgttgtagatccgga 8196358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 302
Target Start/End: Complemental strand, 68009 - 67929
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
    |||||| ||| ||||||| ||| ||||||| |||||||||| ||||||||||  |  || |||  ||||||||||||||||    
T  68009 attcaaccaacgatttgtacgttaacgttgcagatccggaaacatgggtatttcggcgacttaagttttatcatattattt 67929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 23947389 - 23947313
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||    |||| |||||||| || |||| ||| ||||||||||||    
T  23947389 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccatctttttgcggtgttcatttgattcatattgaaagatc 23947313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 226 - 258
Target Start/End: Original strand, 32174625 - 32174657
Alignment:
Q  226 aatcaatgatttgtgcgtcaacgttgtagatcc 258  Q
    ||||||||||||| |||||||||||||||||||    
T  32174625 aatcaatgatttgggcgtcaacgttgtagatcc 32174657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 274
Target Start/End: Complemental strand, 33543612 - 33543560
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    ||||||||||  ||||| | ||||| |||| ||||||||||||||||||||||    
T  33543612 attcaatcaaaaatttgggtgtcaatgttgcagatccggaagcatgggtattc 33543560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 161
Target Start/End: Original strand, 34489254 - 34489290
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattt 161  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  34489254 tgtgttgttcgtcgtcttgtgcgacgttgtttgattt 34489290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 4e-41; HSPs: 92)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 629003 - 628847
Alignment:
Q  149 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacg 248  Q
    ||||||||||||| |  ||||||||||||| ||||| ||||| ||||||||||||| ||||| ||||||| |||||||||||||||||||  | ||||||    
T  629003 cgttgtttgatttggaatcttgttgcggtgttcgtt-ggttcatattgaaagatcagcttcagtcaatcacagattcaatcaatgatttggacatcaacg 628905  T
Q  249 ttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||| |||||| | |||||||| ||||||||||| |||||||||||||||||    
T  628904 ttgtagatccagaagcaagagtattctggtgatttagattatatcatattatttgtag 628847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 35175387 - 35175568
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    |||||||||| |||||| |||   |||||||||||||  ||||||||||||||| ||||||||||  ||||||||||||| ||||| ||||||| | |||    
T  35175387 tgtgttgttcatcgtcttgtgcagcgttgtttgatttcatgtcttgttgcggtgttcgtttggtttatattgaaagatcagcttcagtcaatcacatatt 35175486  T
Q  225 caatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||  | ||||||||| ||||||| || |||| |||||||||||||||| |||| |||||||| |||||||    
T  35175487 caatcaatgatttggacatcaacgttgcagatccgaaaacatgagtattctgatgatttatatttcatcatattgtttgtag 35175568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 53807980 - 53807782
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||||| |  |||||||||||||||||  || | | ||||||||||| |  ||||||||| ||| ||||| ||||| ||||||||||||| |    
T  53807980 gtcgtctaagtgcgaccttgtgttgttcgtcgtcttctgcggcattgtttgatttggcatcttgttgctgtgttcgtt-ggttcatattgaaagatcaac 53807882  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| ||||||| |||||||||||||||||||  ||||||||||| | |||| |||||| | |||||||| ||||||||||| |||||||||||||||||    
T  53807881 ttcagtcaatcacagattcaatcaatgatttggacgtcaacgttgcatatccagaagcaagagtattctggtgatttagattatatcatattatttgtag 53807782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 8914691 - 8914876
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 220  Q
    ||||||||||||||||| ||| | || ||||||||||||| |||| |    ||| ||| ||||||||||| ||||||||||| | |||||  |||||| |    
T  8914691 tgtgttgttcgtcgtcttgtgcggcgctgtttgattttgtatcttttattgtgctgtgttcgtttggttcgtattgaaagattagcttcagacaatcaca 8914790  T
Q  221 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||||||||||||||||| |||||||||||| |||||| |||| ||| |||||||| |||||||||||| ||||||||||||||||    
T  8914791 aattcaatcaatgatttgggcgtcaacgttgcagatccagaagaatgtgtattctggtgatttagatttcatcatattatttgtag 8914876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 115 - 301
Target Start/End: Original strand, 14859466 - 14859649
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||| | ||||||||||||| ||| ||||||| ||   | ||||||  ||||||||||||| || |||||||| ||||||||||||| ||||| |||    
T  14859466 agtgcggtgttgtgttgttcgtcatcttgtgtgacatt---taattttgcatcttgttgcggtgttcatttggttcatattgaaagatcagcttcaatca 14859562  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
    |||| | |||||||||||||||||  ||||||||||| |||||| |||||||||||||| || | |||||||||||||| |||||||    
T  14859563 atcacatattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattttggtaatttagattttatcgtattatt 14859649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 150 - 305
Target Start/End: Complemental strand, 26716187 - 26716032
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 249  Q
    ||||||| ||||||| ||||||||||||| ||||||| ||  ||||||||||| | ||||| ||||||||| ||||||||||||||||  ||||||||||    
T  26716187 gttgtttaattttgtatcttgttgcggtgttcgtttgatttctattgaaagattagcttcagtcaatcataaattcaatcaatgattttggcgtcaacgt 26716088  T
Q  250 tgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    || |||||||||| ||| |||| | | |||||||| ||||||||||||||||||||    
T  26716087 tgcagatccggaatcataggtactataatgatttatattttatcatattatttgta 26716032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 51923706 - 51923891
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtc--ttgttg--cggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 220  Q
    ||||||||||||| ||| ||| | |||| ||||||||||  ||  ||||||  ||||| ||||||||||| ||||||||||||| |||||  |||||  |    
T  51923706 tgtgttgttcgtcatcttgtgcggcgttatttgattttgcatcatttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttcagacaatcgca 51923805  T
Q  221 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     |||||||||||||||||  ||||||||||| |||||| ||||||||||||||||| |||||||||||| ||||||||||||||||    
T  51923806 aattcaatcaatgatttggacgtcaacgttgcagatccagaagcatgggtattctggtgatttagatttcatcatattatttgtag 51923891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 108 - 306
Target Start/End: Original strand, 4821774 - 4821970
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||| | ||| ||||||||||||| || |||| ||||||||||||| |||||||||||||| ||||||||||| ||||||||||||| ||    
T  4821774 tcgtctaagtgcggtgttgtattgttcgtcgtcttgt-tgacattgtttgattttgcgtcttgttgcggtgttcgtttggttcatattgaaagatcagct 4821872  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    | | ||||||| | |||||||| ||||||||  |  |||||||  | ||||||| |||||||||||||| ||||||| |||| |||||||| |||||||    
T  4821873 tgagtcaatcacatattcaatccatgatttggacaccaacgttacaaatccggaggcatgggtattctggtgattta-atttcatcatattttttgtag 4821970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 172 - 306
Target Start/End: Complemental strand, 51303701 - 51303567
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||||||  ||||||||||||| ||||   |||||| | ||||||||||||||||| |||||||||||| |||||| ||||||||||||    
T  51303701 tgcggtgttcgtttggtttgtattgaaagatcagcttctgacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatccagaagcatgggta 51303602  T
Q  272 ttctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||||||||| ||||||||||||||||    
T  51303601 ttctggtgatttagatttcatcatattatttgtag 51303567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 7546583 - 7546779
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg---tgtcttgttg--cggtgctcgtttggttcttattgaaagatcatcttc 209  Q
    |||||| || ||||||||||||||||| ||| | ||||||||||||| |   |   ||||||  ||||| ||||||||||| |||||||||||||  |||    
T  7546583 agtgcgacgttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcaatcctttgttgtgcggtgttcgtttggttcgtattgaaagatcagtttc 7546682  T
Q  210 actcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |  |||||| | ||||| ||||||||||| ||||||||||||  |||||  |||||||||||||||| |||||||||||| ||||||||||||||||    
T  7546683 agacaatcacaaattcagtcaatgatttgagcgtcaacgttgccgatccaaaagcatgggtattctggtgatttagatttcatcatattatttgtag 7546779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 29922030 - 29922221
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    |||| |||| |||||||||   ||||| ||||||||| ||||||||| | ||||||||||||||    ||| |||| ||||||||||||| |||||  ||    
T  29922030 agtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaacca 29922129  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| | |||||||||||||||||  ||||||||||| |||||| ||| ||||  | ||||| ||||||||||||||||||||| |||||||    
T  29922130 atcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcatattgtttgtag 29922221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 29971183 - 29971374
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    |||| |||| |||||||||   ||||| ||||||||| ||||||||| | ||||||||||||||    ||| |||| ||||||||||||| |||||  ||    
T  29971183 agtgtggcgttgtgttgtttcccgtcttgtgtgacgtcgtttgatttcgcgtcttgttgcggtgtatatttcgttcatattgaaagatcaacttcaacca 29971282  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| | |||||||||||||||||  ||||||||||| |||||| ||| ||||  | ||||| ||||||||||||||||||||| |||||||    
T  29971283 atcacatattcaatcaatgatttggacgtcaacgttgcagatccagaaacatgattgttctggtgatttagattttatcatattgtttgtag 29971374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 306
Target Start/End: Complemental strand, 21289933 - 21289738
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || |||| ||||||| |||| ||| | |||||||||||||||  |||| |    ||||||| ||||||||||| ||||||||||||| |||||    
T  21289933 agtgcgacgttgtggtgttcgttgtcttgtgcggcgttgtttgattttgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttca 21289834  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | ||||||||||||||||  | |||||||||| |||||  ||||||||| ||||||| | |||||||||| ||||||||||||||||    
T  21289833 gacaatcacaaattcaatcaatgattttggtgtcaacgttgcagatctagaagcatggatattctggtaatttagatttcatcatattatttgtag 21289738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 115 - 273
Target Start/End: Original strand, 29239316 - 29239474
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| ||||||||||||||||| ||| | || ||||||||||   ||||||||| |||| ||||||||||| ||||| ||||||| ||||| |||    
T  29239316 agtgcggcgttgtgttgttcgtcgtcttgtgcggcgctgtttgatttcacgtcttgttgtggtgttcgtttggttcgtattggaagatcagcttcagtca 29239415  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtatt 273  Q
    |||| ||||| |||||||||||||  |||| |||||||||||||| || ||||| ||||    
T  29239416 atcacagatttaatcaatgatttggacgtcgacgttgtagatccgaaaacatggttatt 29239474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 16235395 - 16235590
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttg--tgtcttgttgcg--gtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||| || ||||||||||| ||||| ||| | ||||||||||||| |  | | |||||| |  ||||||||||||||| ||||||||||| |  || |    
T  16235395 agtgcgacgttgtgttgttcgccgtcttgtgcggcgttgtttgatttcgcattttttgttgtgtggtgctcgtttggttcgtattgaaagattagtttta 16235494  T
Q  211 ctcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      |||||| | ||||||||||||||||| |||||||||||| |||||  ||||||||||||||||| |||||||||||| ||||||||| ||||||    
T  16235495 gacaatcacaaattcaatcaatgatttgggcgtcaacgttgcagatcaagaagcatgggtattctggtgatttagatttcatcatattacttgtag 16235590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 114 - 306
Target Start/End: Original strand, 33579855 - 33580044
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||| ||| ||||||||||||||||| |||   | | ||||||||||| ||||||| |||||| ||||||  ||| ||||||||||||  | ||| ||    
T  33579855 aagtgcagcgttgtgttgttcgtcgtcttgtg---catcgtttgattttgcgtcttgtcgcggtgttcgtttatttcatattgaaagatcgacatcagtc 33579951  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| |||||||||| |||||||||||| ||||||||||||| | | |||  | |||||||| ||||||||||||||||||||    
T  33579952 aattacaaattcaaccaatgatttgggcgtcaacgttgaagatccggaagcacgtgaatttcggtgatttaggttttatcatattatttgtag 33580044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 172 - 306
Target Start/End: Complemental strand, 50194393 - 50194259
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||| ||| |||||||||| || ||||| ||||||| |||||||||| ||||||||  ||| ||||||| ||||||||||||||| |||    
T  50194393 tgcggtgttcgtttgtttcatattgaaagaccagcttcagtcaatcacagattcaatcgatgatttggacgttaacgttgcagatccggaagcatgagta 50194294  T
Q  272 ttctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||||||| | |||||||| |||||||    
T  50194293 ttctggtgatttagatatcatcatattttttgtag 50194259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 117 - 306
Target Start/End: Original strand, 53508200 - 53508390
Alignment:
Q  117 tgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgt-gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaa 215  Q
    ||||||| ||||||||||||||||| ||  || ||||||||||||    || ||||||| ||| ||||||||||| |||||||||||||  | || | ||    
T  53508200 tgcggcgttgtgttgttcgtcgtcttgtacgatgttgtttgatttccccgttttgttgcagtgttcgtttggttcctattgaaagatcaaatccagttaa 53508299  T
Q  216 tcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| |||||||||||||||||||  ||||||| ||| | ||||  ||||||| |||||   ||||||||||||||||||||||||||||||    
T  53508300 tcacagattcaatcaatgatttggacgtcaactttgcacatccaaaagcatgagtattacaatgatttagattttatcatattatttgtag 53508390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 115 - 238
Target Start/End: Complemental strand, 12947389 - 12947266
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||  ||||||||||||||||| ||| | ||||||||||||| |  |||||||| |||| ||||||||||| |||||||| |||| ||||| |||    
T  12947389 agtgcggctttgtgttgttcgtcgtcttgtgcggcgttgtttgatttcgcatcttgttgtggtgttcgtttggttcatattgaaatatcaacttcagtca 12947290  T
Q  215 atcatagattcaatcaatgatttg 238  Q
    ||||||||||||||| ||||||||    
T  12947289 atcatagattcaatcgatgatttg 12947266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 305
Target Start/End: Complemental strand, 26739465 - 26739282
Alignment:
Q  122 cgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatag 221  Q
    ||||||||||||| | |||| ||| | ||| |||||||||||  |||||||| | ||   ||||||||| ||||||||||| | ||||  ||||||||||    
T  26739465 cgctgtgttgttcattgtcttgtgcggcgtcgtttgattttgcatcttgttgtgatgtctgtttggttcctattgaaagattaacttcgatcaatcatag 26739366  T
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    |||||| |||||||||   ||||| ||||| |||||  ||| | |||||||| |||| ||||||||||||||||||||||||||    
T  26739365 attcaaccaatgattttgacgtcagcgttgcagatcaagaatcgtgggtattatgataatttagattttatcatattatttgta 26739282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 229
Target Start/End: Complemental strand, 4396439 - 4396335
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagatt 224  Q
    ||||||||| ||||||| ||||| ||||||||||||||| | |||||||||||| ||||||| ||| ||||||||||| | ||||| |||||||||||||    
T  4396439 tgtgttgtttgtcgtcttgtgtggcgttgtttgattttgcgccttgttgcggtgttcgtttgattcatattgaaagataagcttcagtcaatcatagatt 4396340  T
Q  225 caatc 229  Q
    |||||    
T  4396339 caatc 4396335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 306
Target Start/End: Complemental strand, 27706335 - 27706150
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgt----tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcata 220  Q
    ||||||||||||||||| ||| | |||||||| |||| |  |||| |    ||||||| ||||||||||| ||||||||||||| |||    |||||| |    
T  27706335 tgtgttgttcgtcgtcttgtgcggcgttgtttaatttcgcatcttttgttgtgcggtgttcgtttggttcgtattgaaagatcagcttttaacaatcaca 27706236  T
Q  221 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||||||||||||||||  |||||||||||| | ||||  |||||||||||| ||| | |||||||||| ||||||||||||||||    
T  27706235 aattcaatcaatgatttcggcgtcaacgttgcatatccacaagcatgggtatcctggttatttagatttcatcatattatttgtag 27706150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 172 - 306
Target Start/End: Original strand, 42460780 - 42460913
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    ||||||| ||||||||||| |||| ||| |||| |||||  || ||| | ||||||||||||||||| |||||||||||| |||| | ||||||||   |    
T  42460780 tgcggtgttcgtttggttcgtattcaaatatcaacttcagaca-tcacaaattcaatcaatgatttgggcgtcaacgttgcagatacagaagcatgaaca 42460878  T
Q  272 ttctgatgatttagattttatcatattatttgtag 306  Q
    ||||| |||||||||||||||||||||||||||||    
T  42460879 ttctggtgatttagattttatcatattatttgtag 42460913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 36461551 - 36461355
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| | |||  |||| ||||||||||||  |    
T  36461551 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgttctgttcctattgaaagatctac 36461455  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||  ||||| ||||||||| |||||  |  ||||||| ||||||||||||||||||||    
T  36461454 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttacagatctggaagcatgagtatttcggcgatttaggttttatcatattatttgtag 36461355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 302
Target Start/End: Complemental strand, 43488710 - 43488518
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||| |||| ||||||||||||||||| ||| | ||||   |||||| | |||||||||||||| | |||  |||  |||||||| |||  |    
T  43488710 gtcgtctaagtgtggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgttgcggtgtttgttcagtttctattgaaatatctgc 43488614  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattattt 302  Q
     | | ||||| ||| |||||| ||||||||||  ||||||||||| ||||||||||||||| |||||  | |||||||| ||||||||||||||||    
T  43488613 attaatcaattataaattcaagcaatgatttgaacgtcaacgttgcagatccggaagcatgagtatttcggtgatttaggttttatcatattattt 43488518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 165 - 306
Target Start/End: Original strand, 44805053 - 44805193
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagc 264  Q
    |||||||||||||| ||||||||| | |||||||| |||||| ||| ||||||| | || |||||||| |||||  | ||||||||| | |||||  |||    
T  44805053 gtcttgttgcggtgttcgtttggtgcatattgaaatatcatcctcagtcaatcacatatgcaatcaataatttggac-tcaacgttgcaaatccgagagc 44805151  T
Q  265 atgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||| || ||||||||||||||||||||| |||||||    
T  44805152 atgggtattatggtgatttagattttatcatattgtttgtag 44805193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 48199788 - 48199941
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| || |||||||| |||| ||||||||||| ||||||||||||| ||||| ||||| ||| ||| |||||||||||||  |||| ||||||     
T  48199788 gtttgatttcgtatcttgttgtggtgttcgtttggttcctattgaaagatcaacttcaatcaattataaatttaatcaatgatttggacgtcgacgttgc 48199887  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    | |||| |||||||| | |||  | ||| ||||| ||||||||||||| |||||    
T  48199888 aaatccagaagcatgtgcatttcggtgacttagaatttatcatattatctgtag 48199941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 116 - 306
Target Start/End: Complemental strand, 21533920 - 21533733
Alignment:
Q  116 gtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaa 215  Q
    |||||||| ||||||||||||||||| ||   |||  ||||| ||| | ||||||| |||||| | |||| |||| ||||||||||||  | ||| || |    
T  21533920 gtgcggcgttgtgttgttcgtcgtcttgt---acggcgtttggtttcgcgtcttgtcgcggtgtttgtttagttcctattgaaagatctacatcagtcga 21533824  T
Q  216 tcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
      | | |||||| |||| ||||| |||||||||||| |||||||||||||||||||||  | ||| |||| ||||||||||||||||||||    
T  21533823 ctacaaattcaaccaataatttgggcgtcaacgttgcagatccggaagcatgggtatttcggtgacttaggttttatcatattatttgtag 21533733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 40487293 - 40487489
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||  ||||||| | ||||||| |||||| | |||  |||| ||||||||||||  |    
T  40487293 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt--ttgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctac 40487390  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||  ||||||||||  ||||||| ||| |||||||||||||| ||||||  | ||| |||| ||||||||||||||||||||    
T  40487391 atcagtcaat-acaaattcagccaatgatttggacgtcaacattgcagatccggaagcataggtatttcggtgacttaggttttatcatattatttgtag 40487489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 194 - 306
Target Start/End: Complemental strand, 52116057 - 52115945
Alignment:
Q  194 ttgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatc 293  Q
    ||||||||||| |||||  |||||| | ||||||||||||||||  |||||||| ||| ||||||  || |||||||||||| |||||||||||| ||||    
T  52116057 ttgaaagatcaacttcaaacaatcacatattcaatcaatgatttaagcgtcaacattgcagatccaaaatcatgggtattctaatgatttagattgtatc 52115958  T
Q  294 atattatttgtag 306  Q
    |||||||||||||    
T  52115957 atattatttgtag 52115945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 153 - 306
Target Start/End: Complemental strand, 9797611 - 9797458
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||||| ||||||| |||||| | |||  |||| ||||||||||||  | ||| ||||| | | |||||| ||||||||||  ||| |||||||     
T  9797611 gtttgattttgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctacatcaatcaattacaaattcaagcaatgatttgaacgttaacgttgc 9797512  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||||||||    |||||||  ||||||||||||||||||||    
T  9797511 agatccggaagcatgggtatttaagtgatttatgttttatcatattatttgtag 9797458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 45568565 - 45568369
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||||| ||||   |||||| | |||||||  ||||| | |||  |||| | |||||| | |  |    
T  45568565 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgtcacggtgtttgttcagttcctgttgaaataactac 45568469  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||| ||| |||||||||||||||| ||||  | |||||||| ||||||||||||||||||||    
T  45568468 atcaatcaattacaaattcaaacaatgatttggacgtcaactttgcagatccggaagcatggatatttgggtgatttaggttttatcatattatttgtag 45568369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 107 - 301
Target Start/End: Original strand, 43016823 - 43017014
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    ||||||||||||||||| ||||||||||||  ||| ||||| ||||   |||||||||||||||| |||||| | |||| |||| |  |||||||||  |    
T  43016823 gtcgtccaagtgcggcgttgtgttgttcgttatcttgtgtggcgtt---tgattttgtgtcttgtcgcggtgtttgtttagttccttgtgaaagatcgac 43016919  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatt 301  Q
     | | ||||| | | |||||| |||||||||| |||||||||||| ||||||||| ||||| | |||  | ||| |||| | |||||||||||||    
T  43016920 gttagtcaattacaaattcaaccaatgatttgggcgtcaacgttgcagatccggatgcatgtgcatttcggtgacttaggtgttatcatattatt 43017014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 115 - 298
Target Start/End: Complemental strand, 25461116 - 25460931
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtct--tgttgcggtgctcgtttggttcttattgaaagatcatcttcact 212  Q
    ||||||||| | |||||||||||||||  || ||||||||||||||||||||||  |||||| ||| ||||||| |||  ||||||||||||  || |      
T  25461116 agtgcggcgttatgttgttcgtcgtcttatgcgacgttgtttgattttgtgtcttgtgttgctgtgttcgtttgtttcacattgaaagatcaaatttagc 25461017  T
Q  213 caatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatt 298  Q
    |||| | | ||||||||| ||||||| |||| |||| || ||| |||||| ||||| ||||| | || ||||  ||||||||||||    
T  25461016 caataacaaattcaatcattgatttgagcgtaaacgctgcagaaccggaaacatggatattccggtggtttaagttttatcatatt 25460931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 52923237 - 52923041
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc-at 205  Q
    |||||| ||||| |||||||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||  |||| | |||||||||| ||    
T  52923237 gtcgtctaagtgtggcgctgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctat 52923141  T
Q  206 cttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
     || | ||||| | | |||||| ||||||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  |||||||||||||||||||    
T  52923140 att-agtcaattacaaattcaaccaatgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgta 52923042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 306
Target Start/End: Original strand, 45424809 - 45424962
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | || ||||||||||| | |||| |||| |||||||| |||  | ||  ||||| | | ||||||||||||||||| |||||||| |||     
T  45424809 gtttgatttcgcgtattgttgcggtgtttgtttagttcctattgaaaaatcgacatcggtcaattacaaattcaatcaatgatttgggcgtcaacattgc 45424908  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||| |||||||| |  | ||| || ||||||||||||||||||||||    
T  45424909 agatccggaatcatgggtacttcggtgacttcgattttatcatattatttgtag 45424962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 153 - 273
Target Start/End: Original strand, 32701502 - 32701622
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | || |||||||| || | |||  |||| ||||||||||||  | |||  |||| | | ||||||||||||||||| |||||||||||||    
T  32701502 gtttgatttcgcgttttgttgcgatgtttgttcagttcctattgaaagatctacatcaaccaattacaaattcaatcaatgatttgggcgtcaacgttgt 32701601  T
Q  253 agatccggaagcatgggtatt 273  Q
    |||||||||||||||||||||    
T  32701602 agatccggaagcatgggtatt 32701622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 125 - 306
Target Start/End: Original strand, 41818195 - 41818379
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcat----a 220  Q
    ||||||||||||||||| ||| |   ||||||||||| | ||||||||| | || ||||||| ||| ||||||||||||| ||||| ||||||||    |    
T  41818195 tgtgttgttcgtcgtcttgtgcggtattgtttgatttcgcgtcttgttgtgatgttcgtttg-ttcctattgaaagatcaacttcaatcaatcatttaca 41818293  T
Q  221 gattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     |||||||||||||||||   ||||| |||| ||||||  || ||| |||||| || || ||| ||||||||| ||||||||||||    
T  41818294 aattcaatcaatgatttgaatgtcaatgttgcagatccaaaaacattggtattatggtggttttgattttatcgtattatttgtag 41818379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 4169875 - 4169957
Alignment:
Q  223 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||||| ||||||||||| || ||| |||||||| |||||||| |||||||| |||||||||||||||||||||    
T  4169875 ttcaattaatgatttg-gcgtcaacgttataaatctggaagcattggtattctaatgatttaaattttatcatattatttgtag 4169957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 180 - 306
Target Start/End: Original strand, 19339214 - 19339339
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    |||||| |||| ||||||||||||| ||| | ||||| | | ||||||||||||||||  | ||||| |||| |||||| |||||||||||||| |  ||    
T  19339214 tcgtttagttcctattgaaagatcaactttagtcaattacaaattcaatcaatgatttaggtgtcaatgttgcagatccagaagcatgggtatt-tcgtg 19339312  T
Q  280 atttagattttatcatattatttgtag 306  Q
    | ||||||||||||||||||| |||||    
T  19339313 acttagattttatcatattatctgtag 19339339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 267
Target Start/End: Complemental strand, 35865052 - 35864895
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| || ||||||| ||||||||| ||||||| ||||| ||||   |||||||| ||||| | |||||| |||||| |||| ||||||||||||  |    
T  35865052 gtcgtctaattgcggcgttgtgttgttagtcgtcttgtgtggcgtt---tgattttgcgtcttttcgcggtgttcgtttagttcctattgaaagatcgac 35864956  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatg 267  Q
     ||| ||||| | | |||||||||||||||||  ||| ||| ||| ||||| |||||||||    
T  35864955 atcaatcaattacaaattcaatcaatgatttggacgttaacattgcagatctggaagcatg 35864895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 9998435 - 9998631
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| ||| | ||||   |||||| | || |||| |||||| | |||| |||| | ||||||||||  |    
T  9998435 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcgcggtgtttgtttagttcctcttgaaagatctac 9998531  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||   |||||| |||||| ||||||||||||||  | ||| |||  ||||||||||||||||||||    
T  9998532 atcagtcaattacaaattcaaccaatgatttgcacgatgacgttgcagatccagaagcatgggtatttcggtgacttaagttttatcatattatttgtag 9998631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 54149078 - 54149155
Alignment:
Q  229 caatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||| |||||||||||| |||||||||||||||| ||||  | ||| || ||||||||||||||||||||||    
T  54149078 caatgatttgggcgtcaacgttgcagatccggaagcatggctatttcggtgacttggattttatcatattatttgtag 54149155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 23799918 - 23799834
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||  |||||||||||| ||||||| || |||| |||||   |||| |||||||||||||||||||||||||    
T  23799918 attcaatcaatgatttcggcgtcaacgttgcagatccgaaaacatgagtatttcaatgacttagattttatcatattatttgtag 23799834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 40556782 - 40556866
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||||||  ||||||||||||| ||||||||||||| ||||| || ||| |||  ||||||||||||||||||||    
T  40556782 attcaaccaatgatttggacgtcaacgttgtaaatccggaagcatgtgtattttggtgacttaagttttatcatattatttgtag 40556866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 166 - 306
Target Start/End: Complemental strand, 46304584 - 46304444
Alignment:
Q  166 tcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagca 265  Q
    |||||| |||||| | |||| |||| |||||||| |||  | ||| ||||| | | |||||| |||||||||  |||||||| ||| |||||||||||||    
T  46304584 tcttgtcgcggtgtttgtttagttcctattgaaatatctacatcagtcaattacaaattcaaccaatgatttaggcgtcaacattgcagatccggaagca 46304485  T
Q  266 tgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||  | ||| |||| |||||||||||||| |||||    
T  46304484 tgggtatttcggtgacttaggttttatcatattatatgtag 46304444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 227 - 306
Target Start/End: Complemental strand, 3085304 - 3085225
Alignment:
Q  227 atcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||  ||||||||||| |||| || ||| | |||||||||||||||||||| || ||||||||||||||||    
T  3085304 atcaatgatttgaacgtcaacgttgcagattcgaaagtaggggtattctgatgatttagaattcatcatattatttgtag 3085225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 32246432 - 32246543
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattca 226  Q
    ||||||| ||||| | ||| ||||||||||||||  | ||||||||||| || ||  ||||||| ||||||||||||| ||||| | ||||| | |||||    
T  32246432 tgttgtttgtcgttttgtgcgacgttgtttgattccgcgtcttgttgcgctgttcacttggttcctattgaaagatcaacttcagttaatcacatattca 32246531  T
Q  227 atcaatgatttg 238  Q
    ||||||||||||    
T  32246532 atcaatgatttg 32246543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 304
Target Start/End: Complemental strand, 20465089 - 20464896
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| ||||| || | ||||||||||||||||| ||   |||  ||||||||||| ||||||| |||||| || |||   || ||||||||||||   |    
T  20465089 tcgtctaagtgaggtgttgtgttgttcgtcgtcttgt---acggcgtttgattttgcgtcttgtcgcggtgttcatttaaatcctattgaaagatcgatt 20464993  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgt 304  Q
    ||| ||||| | | ||||||| ||||||||| ||||||| |||| ||||  | ||||||| |||||  | ||| ||| |||||||||||||||||||    
T  20464992 tcagtcaattacaaattcaataaatgatttgggcgtcaatgttgcagatttgaaagcatgagtatttcggtgacttaaattttatcatattatttgt 20464896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 299
Target Start/End: Complemental strand, 20609019 - 20608830
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| || ||||||| ||||||||| ||||||| ||| | | ||   |||||||| ||||||| |||||| | |||| |||| |||||||| |||| |    
T  20609019 gtcgtctaattgcggcgttgtgttgttagtcgtcttgtgcggcatt---tgattttgcgtcttgtcgcggtgtttgtttagttcctattgaaatatcaac 20608923  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatatta 299  Q
     | | ||| | | |  |||||||||||||||| || |||| |||| ||||||||||||||| | |||  | ||||||||||||||| ||||||    
T  20608922 attagtcatttacaagttcaatcaatgatttgagcatcaaagttgcagatccggaagcatgagaatttcggtgatttagattttattatatta 20608830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 21431663 - 21431777
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||  | ||| ||||| | | |||||| ||| ||||||  ||||||||||| |||||||||||||||||||||  | ||| |||  |||||    
T  21431663 tattgaaagatctacatcagtcaattacaaattcaaccaacgatttggacgtcaacgttgcagatccggaagcatgggtatttcggtgacttaagtttta 21431762  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  21431763 tcatattatttgtag 21431777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 192 - 306
Target Start/End: Complemental strand, 47042086 - 47041972
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    ||||||||||||| | ||| ||| | | | |||||| ||||| |||| |||||||||||| ||||||||||||||| | ||| || ||| |||| ||| |    
T  47042086 tattgaaagatcagcatcagtcagttacaaattcaaccaatggtttgggcgtcaacgttgaagatccggaagcatgtgaattttggtgacttaggtttca 47041987  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  47041986 tcatattatttgtag 47041972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 6954816 - 6954620
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||| ||||||||||||| ||| | ||||   |||||| | || ||||  ||||| | |||  |||| ||||||||||||  |    
T  6954816 gtcgtctaagtgcggcgttgtattgttcgtcgtcttgtgcggcgtt---tgatttcgcgttttgtcacggtgtttgttcagttcctattgaaagatctac 6954720  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  |||||| | || |||||||||||||||||||||  | ||| |||  |||||||| |||||||||||    
T  6954719 atcagtcaattacaaattcaaccaatgatttggacgtcaatgctgcagatccggaagcatgggtatttcggtgacttatgttttatcaaattatttgtag 6954620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 22290925 - 22290998
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaa 198  Q
    ||||||||||  ||||| |||| | ||||||||||||||  ||||||||||||| |||||||||||||||||||    
T  22290925 tgtgttgttcaccgtcttgtgtcatgttgtttgattttgcatcttgttgcggtgttcgtttggttcttattgaa 22290998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 38545767 - 38545963
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||| || || ||||||||||||||||| ||| | ||||   |||||| | ||||||| |||||| | ||||  ||   |||||||||||  |    
T  38545767 gtcgtctaagtacgacgttgtgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgtttgtttattttccattgaaagatcgac 38545863  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||| |||||||||||| ||||||| || |||| | |||  | ||| |||| ||||||||||||||||||||    
T  38545864 atcagtcaattacaaattcaaccaatgatttgggcgtcaacgttgaagatccgaaaacatgcgaatttaggtgacttaggttttatcatattatttgtag 38545963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 19619795 - 19619877
Alignment:
Q  223 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||  | ||||||||||||||||| |||||||| | |||  | ||| |||||||||||||||||||||||||    
T  19619795 ttcaatcaatgatttaggtgtcaacgttgtagatcc-gaagcatgagaatttcggtgacttagattttatcatattatttgtag 19619877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 223 - 306
Target Start/End: Original strand, 53099871 - 53099954
Alignment:
Q  223 ttcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||| |||||||||||  | ||||||||||||| | ||||   ||| |||||||||| ||||||||||||||    
T  53099871 ttcaatcaatgatttgggcgtcaacgttacatatccggaagcatgtgaattccagtgacttagattttagcatattatttgtag 53099954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 306
Target Start/End: Original strand, 9173798 - 9173912
Alignment:
Q  192 tattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagatttta 291  Q
    |||||||||| || ||||| ||||||| |||| ||  ||||||||||||  |||| |||| ||| ||||||| |||  |||| || | |||||||||| |    
T  9173798 tattgaaagaccagcttcagtcaatcacagatccacacaatgatttgtgtatcaatgttgcagacccggaagtatgaatattttggttatttagatttga 9173897  T
Q  292 tcatattatttgtag 306  Q
    |||||||||||||||    
T  9173898 tcatattatttgtag 9173912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 299
Target Start/End: Complemental strand, 12149861 - 12149715
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | ||||||| ||| || |||||| |||| ||||||||||||  | ||| ||  | | | |||||| |||||||||| ||||||||||||     
T  12149861 gtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgc 12149762  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatatta 299  Q
    ||||| ||||| |||||||||  | ||| |||  |||||||||||||    
T  12149761 agatctggaagaatgggtatttcggtgaattatgttttatcatatta 12149715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 306
Target Start/End: Original strand, 27856187 - 27856329
Alignment:
Q  165 gtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag-atccggaag 263  Q
    |||||| ||||||||||||||||||| ||||||||||| | ||||| | ||| | | |||||||||||||| ||  |||  |   || || || ||||||    
T  27856187 gtcttgatgcggtgctcgtttggttcctattgaaagattaacttcagtaaataacaaattcaatcaatgatctggacgt--attctgaagtattcggaag 27856284  T
Q  264 catggg--tattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |  ||||||| |||||||||||||||||||||||||||||    
T  27856285 catgagtatattctggtgatttagattttatcatattatttgtag 27856329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 31794072 - 31794150
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| | ||| | |||||||||||||| | ||||||||||||| || |||| ||| ||||||||||||    
T  31794072 tgtgttgttcgtcgttttgtgcggcgttgtttgattttctatcttgttgcggtgttcatttgattcatattgaaagatc 31794150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 305
Target Start/End: Original strand, 44647602 - 44647724
Alignment:
Q  183 tttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatt 282  Q
    |||||||| |||| ||| |||| ||||| ||||| | | ||||| ||||||| ||  |||||||| ||  ||||||| | ||||| ||| |||||| |||    
T  44647602 tttggttcatattaaaatatcaacttcaatcaattaaaaattcactcaatgacttaggcgtcaacattacagatccgtatgcatgagtactctgatcatt 44647701  T
Q  283 tagattttatcatattatttgta 305  Q
    | |||||||||||||||||||||    
T  44647702 ttgattttatcatattatttgta 44647724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 4711583 - 4711646
Alignment:
Q  243 tcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||| |||||||||||||||||||||  | ||| |||  ||||||||||||||||||||    
T  4711583 tcaacgttgcagatccggaagcatgggtatttcggtgacttaagttttatcatattatttgtag 4711646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 12050656 - 12050573
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    |||||| |||||||||| | |||||||||| |||||||||| |||| |||||  |  || |||| |||||||||||||||||||    
T  12050656 attcaaccaatgatttgggtgtcaacgttgcagatccggaaacatgagtatttcggggacttaggttttatcatattatttgta 12050573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 147 - 218
Target Start/End: Original strand, 52496932 - 52497003
Alignment:
Q  147 gacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatca 218  Q
    |||||||||||||||   || |||||| |||| ||||||| ||||||||||||||||| ||||| |||||||    
T  52496932 gacgttgtttgatttcacgtattgttgaggtgttcgtttgattcttattgaaagatcagcttcaatcaatca 52497003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Complemental strand, 36734765 - 36734687
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||||| ||| | ||||||||||||||  ||||| |||||||| || |||| ||| || |||||||||    
T  36734765 tgtgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttattgcggtgttcatttgattcataatgaaagatc 36734687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 303
Target Start/End: Original strand, 45425603 - 45425753
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | || |||| |||||| | |||| ||||  |||||||||||    ||| ||||| | | ||||||||||||||||| || ||||| |||     
T  45425603 gtttgatttcgcgtattgtcgcggtgtttgtttagttcccattgaaagatcgaaatcaatcaattacaaattcaatcaatgatttgggcttcaacattgc 45425702  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttg 303  Q
    |||||||||| |||  |||||  | ||| || |||||||||||||||||||    
T  45425703 agatccggaaccataagtatttcggtgacttcgattttatcatattatttg 45425753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 306
Target Start/End: Original strand, 51487217 - 51487259
Alignment:
Q  264 catgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||| |||||||| |||||||||||||||||||||||||||||    
T  51487217 catgagtattctggtgatttagattttatcatattatttgtag 51487259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 261 - 306
Target Start/End: Complemental strand, 7792156 - 7792111
Alignment:
Q  261 aagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| |||||||  |||||||||||||||||||||||||||||    
T  7792156 aagcatgagtattctagtgatttagattttatcatattatttgtag 7792111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 249
Target Start/End: Complemental strand, 7887501 - 7887424
Alignment:
Q  172 tgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgt 249  Q
    ||||||| |||||| |||| ||||||||||||| |||||  |||||| | |||| || ||||||||| ||||||||||    
T  7887501 tgcggtgttcgtttagttcctattgaaagatcaacttcagacaatcacatattcgattaatgatttgggcgtcaacgt 7887424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 10233038 - 10233234
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| ||||||||||||||||| |||   ||  ||||||||| | || |||| |||||| | |||  |||| | ||||||||||  |    
T  10233038 gtcgtctaagtgcggcgttgtgttgttcgtcgtcttgtg---cggcgtttgatttcgcgttttgtcgcggtgtttgttcagttcctcttgaaagatctac 10233134  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||   ||  ||||||| |||||| ||| |||| |||||  | ||| |||  ||||||||||||||||||||    
T  10233135 atcagtcaattacaaattcaaccaatgatttagacgataacgttgcagatccagaaacatgagtatttcggtgacttaagttttatcatattatttgtag 10233234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 269 - 306
Target Start/End: Original strand, 38142652 - 38142689
Alignment:
Q  269 gtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  38142652 gtattctgatgatttagatcttatcatattatttgtag 38142689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 306
Target Start/End: Original strand, 47896120 - 47896316
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| ||||| |||| |||||||||||| |||| ||| | ||||   ||||||   ||||||| |||||  | |||| |||| |||||||||||   |    
T  47896120 gtcgtcaaagtgtggcgttgtgttgttcgttgtcttgtgcggcgtt---tgatttcacgtcttgtcgcggtatttgtttagttcctattgaaagatttac 47896216  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||| |||| || |||| | |||||||||||||  ||||  ||| | |||| ||||||| ||||||||||||    
T  47896217 atcagtcaattacaaattcaaccaatgatttgggcgtaaatgttgcatatccggaagcatgaatatttcgataacttaggttttatcttattatttgtag 47896316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 48650854 - 48650658
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||  |||||||||||| |||| ||| | | ||   |||||| | ||||||| |||||| | |||  |||| ||||||||||||  |    
T  48650854 gtcgtctaagtgcggcattgtgttgttcgttgtcttgtgcggcatt---tgatttcgcgtcttgtcgcggtgtttgttcagttcctattgaaagatctgc 48650758  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||| |||||  ||||||||||| ||||| | ||| ||| |||||  | ||| |||  ||||||||||||||||||||    
T  48650757 atcaatcaattacaaattcaaccaataatttggacgtcaacgttgcagatctgaaagaatgagtatttcggtgacttaagttttatcatattatttgtag 48650658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 115 - 203
Target Start/End: Original strand, 3606749 - 3606837
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||  ||||||||||||||||| ||||| |||||| |||| |   ||||||||| |||| |||||||||   ||||||||||||    
T  3606749 agtgcggcattgtgttgttcgtcgtcttgtgtggcgttgtatgatatcccgtcttgttgtggtgttcgtttggtatctattgaaagatc 3606837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 7448922 - 7448838
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||||||  ||||||||||| | ||||||||||||| |||||  | ||| |||  ||| ||||||||||||||||    
T  7448922 attcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtag 7448838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 7457064 - 7456980
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||||||  ||||||||||| | ||||||||||||| |||||  | ||| |||  ||| ||||||||||||||||    
T  7457064 attcaaccaatgatttggacgtcaacgttgcatatccggaagcatgagtatttcggtgacttaagtttcatcatattatttgtag 7456980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 21313116 - 21313200
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||||||||||||||  ||||||||| | | ||| | || |||| |||||  | ||| |||||||||||||||||||||||||    
T  21313116 attcaatcaatgatttggacgtcaacgtagcatatctgaaatcatgagtatttcggtgacttagattttatcatattatttgtag 21313200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 266
Target Start/End: Original strand, 27066034 - 27066078
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcat 266  Q
    ||||||||||| ||||| |||||||| ||||||||||||||||||    
T  27066034 attcaatcaattatttgagcgtcaacattgtagatccggaagcat 27066078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 306
Target Start/End: Original strand, 32246551 - 32246587
Alignment:
Q  270 tattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| |||||||||||||||||||||||||||||    
T  32246551 tattctggtgatttagattttatcatattatttgtag 32246587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 42719520 - 42719596
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | ||||||||||||||  |||||  ||||||| || |||| ||| ||||||||||||    
T  42719520 tgttgttcgtcgtcttgtgcggcgttgtttgattttccgtcttcgtgcggtgttcatttgattcatattgaaagatc 42719596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 222 - 274
Target Start/End: Original strand, 46178653 - 46178705
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattc 274  Q
    |||||||||| || ||| |||||||||||| ||||||||| ||||||||||||    
T  46178653 attcaatcaaagaattgggcgtcaacgttgcagatccggaggcatgggtattc 46178705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 261
Target Start/End: Complemental strand, 25631516 - 25631477
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccgga 261  Q
    |||||||||| |||||| ||||||||||||||||||||||    
T  25631516 attcaatcaaagatttgggcgtcaacgttgtagatccgga 25631477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 127 - 202
Target Start/End: Original strand, 32607472 - 32607547
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||||||||| ||||| |||||||||||||   |||||  ||||||| || |||| ||| |||||||||||    
T  32607472 tgttgttcgtcgtcttgtgtggcgttgtttgatttcccgtcttcgtgcggtgttcatttgattcatattgaaagat 32607547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 38860122 - 38860036
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatggg--tattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| |||||| |||  ||||||||||| ||||||| || ||||||  |||| || ||| |||| ||||||||||||||||||||    
T  38860122 attcaaccaatgacttggtcgtcaacgttgcagatccgaaaacatgggtatattttggtgacttaggttttatcatattatttgtag 38860036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 247 - 306
Target Start/End: Original strand, 46220768 - 46220827
Alignment:
Q  247 cgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||| ||||||| |||||| ||||||    |||||||||||||||||||||||||||||    
T  46220768 cgttgcagatccgaaagcattggtatttcagtgatttagattttatcatattatttgtag 46220827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 268
Target Start/End: Original strand, 22803106 - 22803152
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgg 268  Q
    |||||||||| |||||| |||||||||||| ||||||||| ||||||    
T  22803106 attcaatcaaagatttgagcgtcaacgttgcagatccggaggcatgg 22803152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 12946944 - 12946891
Alignment:
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| |||| ||| |||||||| |||||||||||| |||||||| |||||||    
T  12946944 agatccagaagtatgagtattctggtgatttagatttcatcatattttttgtag 12946891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 31271817 - 31271768
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta 271  Q
    |||||||||| |||||| ||||||||  || |||||||||||||||||||    
T  31271817 attcaatcaaagatttgggcgtcaacaatgcagatccggaagcatgggta 31271768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 174 - 306
Target Start/End: Original strand, 18011052 - 18011184
Alignment:
Q  174 cggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtatt 273  Q
    ||||| |||||| |||  ||||||||||||  ||| | ||||| | |  |||||||||| | ||| |||||||||||| |||||| ||||||||  ||||    
T  18011052 cggtgttcgtttagtttctattgaaagatcgactttagtcaataacaatttcaatcaatcacttgggcgtcaacgttgcagatccagaagcatgaatatt 18011151  T
Q  274 ctgatgatttagattttatcatattatttgtag 306  Q
        ||| |||||| | ||||||||||||||||    
T  18011152 tcagtgacttagatataatcatattatttgtag 18011184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 35499269 - 35499193
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| | |||||||||||||   |||||  ||||||| || |||| ||| ||||||||||||    
T  35499269 tgttgttcgtcgtcttgtgcggcgttgtttgatttcccgtctttgtgcggtgttcatttgattcatattgaaagatc 35499193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 127 - 203
Target Start/End: Original strand, 46934645 - 46934721
Alignment:
Q  127 tgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||| ||| |  ||||||||||||   ||||| |||||||| || |||| ||| ||||||||||||    
T  46934645 tgttgttcgtcgtcttgtgcggtgttgtttgatttcccgtcttcttgcggtgttcatttgattcatattgaaagatc 46934721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 149 - 306
Target Start/End: Complemental strand, 58169 - 58012
Alignment:
Q  149 cgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacg 248  Q
    |||| |||||||||| |||||||||||||| | ||||| ||| || |||||||||| ||||| ||||||| |||||||||| ||||||||  |||||||     
T  58169 cgttttttgattttgcgtcttgttgcggtgtttgtttgtttcatactgaaagatcagcttcagtcaatcacagattcaatcgatgatttggacgtcaaca 58070  T
Q  249 ttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||||||||||||| |||||||| |||||||||||| |||||||| |||||||    
T  58069 ttgcagatccggaagcatgagtattctggtgatttagatttcatcatattttttgtag 58012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 137 - 306
Target Start/End: Complemental strand, 92589 - 92420
Alignment:
Q  137 cgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatt 236  Q
    ||||| ||| || ||||||||||||   ||||||||| |||| ||||||||||| |||||||||||||  || | | ||||| |||||||||||||||||    
T  92589 cgtcttgtgcgatgttgtttgatttcacgtcttgttgtggtgttcgtttggttcatattgaaagatcaattttagtaaatcacagattcaatcaatgatt 92490  T
Q  237 tgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||  |||||||||||||||||| ||||||||||||||||| |  |||| ||||||||||||| |||||||    
T  92489 tggacgtcaacgttgtagatccagaagcatgggtattctggtagtttaaattttatcatattgtttgtag 92420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 93080 - 93272
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgatttt-gtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    ||||| ||| ||||||||| || |||| ||| | ||||||||||| || ||||||||||| |||| ||||||||||| ||||||||||||   |||||||    
T  93080 agtgctgcgttgtgttgtttgttgtcttgtgcggcgttgtttgatattcgtgtcttgttgtggtgttcgtttggttcatattgaaagatcggtttcactc 93179  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||| | ||| ||||||||||| |  ||||||||||| |||||| |||  |||||||||||| ||||||| ||||||||||||| |||||||    
T  93180 aatcacatattgaatcaatgattaggacgtcaacgttgcagatccagaaatatgggtattctggtgatttaaattttatcatattgtttgtag 93272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0888 (Bit Score: 75; Significance: 1e-34; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 180 - 306
Target Start/End: Complemental strand, 1728 - 1602
Alignment:
Q  180 tcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatg 279  Q
    ||||||||||| ||||||||||||| |||||  |||||| | ||||||||||||||||| |  ||||||| |||||||| ||| ||||||||||||| ||    
T  1728 tcgtttggttcgtattgaaagatcaacttcagacaatcacaaattcaatcaatgatttgggtatcaacgtagtagatccagaaacatgggtattctggtg 1629  T
Q  280 atttagattttatcatattatttgtag 306  Q
    |||||||||||||||||||||||||||    
T  1628 atttagattttatcatattatttgtag 1602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 155 - 306
Target Start/End: Complemental strand, 71375 - 71224
Alignment:
Q  155 ttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtag 254  Q
    ||||||| | ||||||| | |||| |||||| |||| |||| |||||||  | ||| ||||| ||| ||||||||||||||| | | |||||||||| ||    
T  71375 ttgatttcgcgtcttgtcgtggtgttcgtttagttcctatttaaagatcggcatcagtcaattataaattcaatcaatgattggggtgtcaacgttgcag 71276  T
Q  255 atccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||||| |||||| ||||||||||| |||||||||||||    
T  71275 atccggaagcatgggtattttgatgacttagattttattatattatttgtag 71224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 65; Significance: 1e-28; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 306
Target Start/End: Original strand, 1314 - 1509
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||||| ||||||||||||||||| ||||| ||||   |||||| | |||||||||||||| |||||| |||| ||||||||||||  |     
T  1314 tcgtctaagtgcggcgttgtgttgttcgtcgtcttgtgtggcgtt---tgatttcgcgtcttgttgcggtgttcgtttagttcctattgaaagatcggca 1410  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| ||||| | | |||| | |||| ||||| |||||||||||| || ||  |||||||| | |||  | |||||||| ||||||||||||||||||||    
T  1411 tcagtcaattacaaattcgaccaataatttgggcgtcaacgttgcagttctagaagcatgtgaatttcggtgatttaggttttatcatattatttgtag 1509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 32867 - 32671
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| | ||||||||||||||| ||| | ||||   |||||| | ||||||| |||||  | |||  |||| ||||||||||||  |    
T  32867 gtcgtctaagtgcggcgttttgttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtatttgttcagttcctattgaaagatctac 32771  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| ||||||||||  ||||||||||| ||||| ||||||||| |||||  | ||| |||||||||||||||||||||||||    
T  32770 atcaatcaattacaaattcaagcaatgatttggacgtcaacgttgcagatctggaagcatgagtatttcggtgacttagattttatcatattatttgtag 32671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 54; Significance: 5e-22; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 114 - 306
Target Start/End: Original strand, 15467 - 15657
Alignment:
Q  114 aagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    |||||||| | ||||||||||||||||| ||| | ||||  ||||||| | ||||||| |||||| | |||   ||| ||||||||||||  | ||| ||    
T  15467 aagtgcggtgttgtgttgttcgtcgtcttgtgcggcgtt--ttgatttcgcgtcttgtcgcggtgtttgttcatttcctattgaaagatctacatcagtc 15564  T
Q  214 aatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||| | | |||||| ||||||||||  ||||||| ||| |||||||||||||||| ||||  | ||| |||| ||||||||||||||||||||    
T  15565 aattacaaattcaaccaatgatttggacgtcaacattgcagatccggaagcatggatatttcggtgacttaggttttatcatattatttgtag 15657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 222 - 306
Target Start/End: Complemental strand, 1827 - 1743
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||| ||  |||||||| |||||||||||||||||||||  ||||| ||| |||||||||||||||||||||    
T  1827 attcaatcaatgatttgggcaccaacgttgcagatccggaagcatgggtatttcgatgacttatattttatcatattatttgtag 1743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 187 - 302
Target Start/End: Complemental strand, 31317 - 31202
Alignment:
Q  187 gttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttaga 286  Q
    |||| ||||||||||||  | ||||||||| | | |||||||||| |||||| || |||| |||| |||||||||||||||||||||  | ||| |||||    
T  31317 gttcctattgaaagatcgacatcactcaattacaaattcaatcaacgatttgagcatcaatgttgcagatccggaagcatgggtatttcggtgacttaga 31218  T
Q  287 ttttatcatattattt 302  Q
    ||||||||||||||||    
T  31217 ttttatcatattattt 31202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 4141 - 4337
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttg-attttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactc 213  Q
    ||||||||| ||||||| |||| ||||  |||| |||| |||  |||| || ||||||||||||| || ||| || | ||||||||||||| ||| | |     
T  4141 agtgcggcgttgtgttgctcgttgtctaatgtggcgttttttttatttcgtatcttgttgcggtgttcattttgtacatattgaaagatcaactttagtt 4240  T
Q  214 aatca----tagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||    | |||||| |||||||  || | |||||||||| ||||||| |||| || ||||| ||||||||||||||||||||||||||||||||    
T  4241 aatcaattgttgattcactcaatgacatgagtgtcaacgttgcagatccgaaagcttgagtattttgatgatttagattttatcatattatttgtag 4337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0128 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 36906 - 36990
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||||||| ||||||| ||||   ||| |||||||||||||||    |||||||||||||||||||||||||||||    
T  36906 attcaatcaatgatttgggcgtcaatgttgctaatctggaagcatgggtatttcagtgatttagattttatcatattatttgtag 36990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 38076 - 38221
Alignment:
Q  164 tgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatc---cgg 260  Q
    ||||||||| | ||| |||||| |||| |||||||||||   ||||| ||||| | | |||||||| |||||||| | |||||| |||| ||||   |||    
T  38076 tgtcttgttacagtgttcgtttagttcatattgaaagatagacttcagtcaattacaaattcaatcgatgatttgggtgtcaacattgttgatccggcgg 38175  T
Q  261 aagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    || ||||||||||  | ||| |||||||||||||||||||||||||    
T  38176 aaacatgggtatttcggtgacttagattttatcatattatttgtag 38221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 10162 - 9966
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||  ||| ||||||||||||| ||| | ||||   |||||| | ||||||| |||||| || |||  ||| ||||||||||||  |    
T  10162 gtcgtctaagtgcggctttgttttgttcgtcgtcttgtgcggcgtt---tgatttcgcgtcttgtcgcggtgttcatttaattcctattgaaagatcgac 10066  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||  ||||| | | |||||| |||||||||| | |||||||||| |||||| ||| |||| |||||    ||| || | ||||||||||||||||||||    
T  10065 atcgatcaattacaaattcaaccaatgatttgagagtcaacgttgcagatccagaaacatgtgtatttcagtgaattgggttttatcatattatttgtag 9966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 2)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 212 - 306
Target Start/End: Complemental strand, 4058 - 3965
Alignment:
Q  212 tcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    ||||||| |||||||| |||||||||   ||||||||||| | || ||||| ||||| ||||||| ||||||| |||||||||||||||||||||    
T  4058 tcaatcacagattcaaccaatgatttagacgtcaacgttgcatatacggaaacatgg-tattctggtgatttaaattttatcatattatttgtag 3965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 148 - 210
Target Start/End: Complemental strand, 4134 - 4072
Alignment:
Q  148 acgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttca 210  Q
    |||||||||||||| ||||||| ||| |||| ||||||| ||| |||||||||| || |||||    
T  4134 acgttgtttgatttcgtgtcttattgtggtgttcgtttgattcatattgaaagaccagcttca 4072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 107 - 306
Target Start/End: Complemental strand, 66162 - 65966
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||| ||| | ||||||||||||||| ||||| |||    ||||||||  |||||| | |||| | |||| |||   |||| ||||||  |    
T  66162 gtcgtctaagtgcagcgttatgttgttcgtcgtcttgtgtggcgtc---tgattttgcatcttgtcgtggtgtttgtttagttacaattggaagatcgac 66066  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
     ||| ||||| | | |||||| |||||||||| | | |||||||| |||||||||||||||||||||  | ||| |||  ||||||||||||||||||||    
T  66065 atcagtcaattacaaattcaaccaatgatttgggtgccaacgttgcagatccggaagcatgggtatttcggtgacttatgttttatcatattatttgtag 65966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 108 - 306
Target Start/End: Complemental strand, 2092 - 1897
Alignment:
Q  108 tcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatct 207  Q
    ||||| |||||||||  | |||||||||||||||  |||| ||||   |||||| |  |||||| |||||| |  ||| |||| ||||||||||||  |     
T  2092 tcgtctaagtgcggcattttgttgttcgtcgtcttatgtggcgtt---tgatttcgcatcttgtcgcggtgtttttttagttcctattgaaagatctaca 1996  T
Q  208 tcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    | | ||||| | | |||||| ||||| |||| |||||||||||| ||||||| || |||  |||||  | |||||||| ||||||||||||||||||||    
T  1995 ttagtcaattacaaattcaaccaatggtttgggcgtcaacgttgcagatccgaaaacataagtatttcggtgatttaggttttatcatattatttgtag 1897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 222 - 306
Target Start/End: Original strand, 50857 - 50941
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    |||||| ||||||||||  ||||||||||| |||||||||||||||| ||||  | ||| |||  ||||||||||||||||||||    
T  50857 attcaaccaatgatttggacgtcaacgttgcagatccggaagcatggatatttcggtgacttaagttttatcatattatttgtag 50941  T

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Target: scaffold0634 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 299
Target Start/End: Original strand, 8524 - 8670
Alignment:
Q  153 gtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgt 252  Q
    ||||||||| | ||||||| ||| || |||||| |||| ||||||||||||  | ||| ||  | | | |||||| |||||||||| ||||||||||||     
T  8524 gtttgatttcgcgtcttgtcgcgatgttcgtttagttcctattgaaagatcgacatcagtctcttacaaattcaaccaatgatttgggcgtcaacgttgc 8623  T
Q  253 agatccggaagcatgggtattctgatgatttagattttatcatatta 299  Q
    ||||| ||||| |||||||||  | ||| |||  |||||||||||||    
T  8624 agatctggaagaatgggtatttcggtgaattatgttttatcatatta 8670  T

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Target: scaffold0603 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 115 - 306
Target Start/End: Original strand, 7693 - 7880
Alignment:
Q  115 agtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactca 214  Q
    ||||||||| ||||||||| ||||||| ||||| ||||   ||| || | |||||| ||| ||| ||||| | ||  ||||||||||||  ||||| |||    
T  7693 agtgcggcgttgtgttgtttgtcgtcttgtgtggcgtt---tgaattcgcgtcttgatgcagtgttcgttagttttctattgaaagatccacttcagtca 7789  T
Q  215 atcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgtag 306  Q
    || ||| |||| |||||| ||||| | ||| |||||| | |||||||||||||| || | |  ||| ||| | |||||||||||||||||||    
T  7790 attataaattccatcaattatttgggtgtcgacgttgcatatccggaagcatgg-taatgtagtgagttataatttatcatattatttgtag 7880  T

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Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 270
Target Start/End: Complemental strand, 71984 - 71824
Alignment:
Q  107 gtcgtccaagtgcggcgctgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatc 206  Q
    |||||| |||||||||| |||||||||||| |||| |||   ||  |||||||||   || |||| |||||| | |||  |||| ||||||||||||  |    
T  71984 gtcgtctaagtgcggcgttgtgttgttcgttgtcttgtg---cggagtttgatttcacgttttgtcgcggtgtttgttcagttcctattgaaagatctac 71888  T
Q  207 ttcactcaatcatagattcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggt 270  Q
     | | ||||| | | |||||| ||||||||||   |||||||||||||||||||||||||||||    
T  71887 attagtcaattacaaattcaaccaatgatttggatgtcaacgttgtagatccggaagcatgggt 71824  T

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Target: scaffold0002 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 203
Target Start/End: Original strand, 453936 - 454014
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatc 203  Q
    ||||||||||||||||| | | | ||||||||||||||  |||||||||||||| || ||||  || ||||||||||||    
T  453936 tgtgttgttcgtcgtcttgggcggcgttgtttgattttcagtcttgttgcggtgttcatttgactcatattgaaagatc 454014  T

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Target: scaffold0154 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 226 - 306
Target Start/End: Original strand, 25375 - 25455
Alignment:
Q  226 aatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggta-ttctgatgatttagattttatcatattatttgtag 306  Q
    ||||||||||||| |||||||| ||||||||||  || |||| ||| ||||| ||| |||||||| ||||||||||||||||    
T  25375 aatcaatgatttgagcgtcaacattgtagatccaaaaacatgagtatttctg-tgacttagatttgatcatattatttgtag 25455  T

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Target: scaffold0064 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 19122 - 19066
Alignment:
Q  182 gtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttg 238  Q
    ||||||||| ||||||||||| | ||||| ||||||| ||| |||||||||||||||    
T  19122 gtttggttcatattgaaagatgaacttcagtcaatcacagaatcaatcaatgatttg 19066  T

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Target: scaffold0219 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 222 - 305
Target Start/End: Complemental strand, 14878 - 14796
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccggaagcatgggtattctgatgatttagattttatcatattatttgta 305  Q
    ||||||||||||||||  |  ||||| ||| |||||||||| |||| |||||  ||||| ||||| ||||||||||||||||||    
T  14878 attcaatcaatgatttaggaatcaacattgcagatccggaaacatgagtatttcgatgacttaga-tttatcatattatttgta 14796  T

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Target: scaffold0113 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 36760 - 36683
Alignment:
Q  125 tgtgttgttcgtcgtctggtgtgacgttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagat 202  Q
    ||||||||||||||||| ||| |  ||||||||||||  | |||||||| |||| |  |||||||| |||||||||||    
T  36760 tgtgttgttcgtcgtcttgtgcggagttgtttgatttcttttcttgttgtggtgattatttggttcatattgaaagat 36683  T

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Target: scaffold0014 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 222 - 259
Target Start/End: Complemental strand, 201363 - 201326
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccg 259  Q
    |||||||||| |||||| ||||||||||||||||||||    
T  201363 attcaatcaaagatttgggcgtcaacgttgtagatccg 201326  T

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Target: scaffold0311 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 222 - 297
Target Start/End: Original strand, 8778 - 8854
Alignment:
Q  222 attcaatcaatgatttgtgcgtcaacgttgtagatccgga-agcatgggtattctgatgatttagattttatcatat 297  Q
    |||||||||| |||||| |||||||||||| ||||||||| | ||||| ||||||| | | ||  ||||||||||||    
T  8778 attcaatcaaagatttgggcgtcaacgttgcagatccggagaccatggatattctggtcactttaattttatcatat 8854  T

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Target: scaffold0095 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 150 - 238
Target Start/End: Original strand, 9396 - 9484
Alignment:
Q  150 gttgtttgattttgtgtcttgttgcggtgctcgtttggttcttattgaaagatcatcttcactcaatcatagattcaatcaatgatttg 238  Q
    |||||||||||||  || || ||| |||| |||||||||| || ||||||||||| ||| | ||||| | | |||||||||| ||||||    
T  9396 gttgtttgattttccgttttattgtggtgttcgtttggttatttttgaaagatcaacttaagtcaattacatattcaatcaacgatttg 9484  T

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