View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7708_low_38 (Length: 263)
Name: NF7708_low_38
Description: NF7708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7708_low_38 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 8 - 237
Target Start/End: Complemental strand, 3416114 - 3415885
Alignment:
| Q |
8 |
acaaccatgtaaaagcacatgtctagaattataaataccacacctagcatgactaggattatataacaaggattagcttcaagtaaagaggagcaaggaa |
107 |
Q |
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| T |
3416114 |
acaaccatgtaaaagcacatgtctagaattctaaataccacacctagcatgactaggattatataacaaggattagcttcaagtaaagaggagcaaggaa |
3416015 |
T |
|
| Q |
108 |
gctacctaggttttaaaattttagcaactaagaatttttgtttatgcataaaattccatcatttctttgcaaccatgaccaaattgaaggcttgaaaatt |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3416014 |
gctacctaggttttaaaattttagcaactaagaatttttgtttatgcataaaattccatcatttctttgcaaccatgaccaaattgaaggcttgaaaatt |
3415915 |
T |
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| Q |
208 |
ctagaagaccaatcatgtgttcaacagagt |
237 |
Q |
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||||||||||||||||||||||||| |||| |
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| T |
3415914 |
ctagaagaccaatcatgtgttcaaccgagt |
3415885 |
T |
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