View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7708_low_40 (Length: 259)
Name: NF7708_low_40
Description: NF7708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7708_low_40 |
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Alignment Details
Target: chr8 (Bit Score: 244; Significance: 1e-135; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 244; E-Value: 1e-135
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 42069278 - 42069521
Alignment:
| Q |
1 |
cttcctgcatatgttgaagattaattagctacactgctaagtccttgcacaattttaattatggtatcagcctcaactttatagagcttactttgctaat |
100 |
Q |
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| T |
42069278 |
cttcctgcatatgttgaagattaattagctacactgctaagtccttgcacaattttaattatggtatcagcctcaactttatagagcttactttgctaat |
42069377 |
T |
|
| Q |
101 |
tagcccatcattgaccattgagctgcttaatttcatgaagagatcatataatgcttcaatttcagaaacattaactggaagaatatgatgtttacaaaca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42069378 |
tagcccatcattgaccattgagctgcttaatttcatgaagagatcatataatgcttcaatttcagaaacattaactggaagaatatgatgtttacaaaca |
42069477 |
T |
|
| Q |
201 |
caaagaaaatgttgattaattcaatacttcacaactacaatatt |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42069478 |
caaagaaaatgttgattaattcaatacttcacaactacaatatt |
42069521 |
T |
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