View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7708_low_50 (Length: 237)

Name: NF7708_low_50
Description: NF7708
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7708_low_50
NF7708_low_50
[»] chr4 (74 HSPs)
chr4 (117-237)||(28034243-28034363)
chr4 (117-237)||(760203-760322)
chr4 (112-237)||(15841385-15841510)
chr4 (117-229)||(34544128-34544241)
chr4 (119-237)||(36629251-36629369)
chr4 (112-237)||(4955334-4955459)
chr4 (125-237)||(2740714-2740826)
chr4 (117-228)||(23556888-23556999)
chr4 (119-237)||(50630779-50630897)
chr4 (119-236)||(54108928-54109044)
chr4 (126-237)||(3244482-3244593)
chr4 (126-237)||(15841016-15841126)
chr4 (119-237)||(22183288-22183406)
chr4 (119-237)||(50002440-50002558)
chr4 (144-237)||(16888865-16888958)
chr4 (144-237)||(20826231-20826324)
chr4 (129-237)||(41707499-41707606)
chr4 (114-237)||(44620674-44620796)
chr4 (119-237)||(39792884-39793002)
chr4 (112-233)||(18932766-18932887)
chr4 (133-237)||(34646687-34646791)
chr4 (133-236)||(45496820-45496923)
chr4 (130-237)||(54741213-54741320)
chr4 (129-232)||(54936215-54936318)
chr4 (126-237)||(55933155-55933266)
chr4 (119-237)||(25483350-25483468)
chr4 (119-237)||(32941147-32941265)
chr4 (119-209)||(39404060-39404150)
chr4 (144-237)||(44620367-44620460)
chr4 (144-237)||(54017644-54017737)
chr4 (133-237)||(41370371-41370475)
chr4 (120-236)||(44621017-44621133)
chr4 (138-237)||(2741085-2741184)
chr4 (119-237)||(52884709-52884828)
chr4 (119-237)||(22027985-22028103)
chr4 (7-53)||(28034526-28034572)
chr4 (119-209)||(34004609-34004698)
chr4 (119-237)||(36572033-36572151)
chr4 (132-237)||(52884901-52885007)
chr4 (144-237)||(3341142-3341235)
chr4 (132-197)||(31691206-31691271)
chr4 (144-237)||(54017751-54017844)
chr4 (133-237)||(49880174-49880278)
chr4 (119-237)||(1731671-1731789)
chr4 (163-237)||(11348396-11348470)
chr4 (119-209)||(22028393-22028483)
chr4 (119-237)||(36608685-36608803)
chr4 (123-237)||(49302918-49303034)
chr4 (126-228)||(6876131-6876230)
chr4 (119-209)||(3340849-3340939)
chr4 (119-237)||(20825850-20825968)
chr4 (119-237)||(39404412-39404530)
chr4 (119-237)||(50459735-50459853)
chr4 (133-237)||(54343046-54343143)
chr4 (144-197)||(3271841-3271894)
chr4 (144-237)||(10245934-10246026)
chr4 (133-237)||(6975494-6975598)
chr4 (156-220)||(7147703-7147766)
chr4 (133-197)||(23817719-23817783)
chr4 (174-218)||(41603270-41603314)
chr4 (119-206)||(43827485-43827571)
chr4 (119-209)||(49076855-49076944)
chr4 (119-236)||(54108551-54108669)
chr4 (119-232)||(4390125-4390238)
chr4 (144-217)||(23630338-23630411)
chr4 (174-223)||(31249937-31249986)
chr4 (144-196)||(1868106-1868158)
chr4 (175-207)||(6875857-6875889)
chr4 (132-196)||(10396186-10396250)
chr4 (135-179)||(11706584-11706628)
chr4 (133-237)||(16889574-16889678)
chr4 (156-216)||(29802576-29802636)
chr4 (156-196)||(45484774-45484814)
chr4 (130-230)||(48111733-48111833)
[»] chr2 (62 HSPs)
chr2 (117-237)||(30313192-30313311)
chr2 (117-237)||(29874047-29874167)
chr2 (117-235)||(29873561-29873679)
chr2 (119-237)||(40679655-40679773)
chr2 (134-237)||(30323478-30323581)
chr2 (119-237)||(42514663-42514781)
chr2 (132-237)||(28254276-28254381)
chr2 (112-237)||(28531333-28531458)
chr2 (144-237)||(33561502-33561595)
chr2 (133-237)||(41283515-41283619)
chr2 (126-237)||(41678401-41678511)
chr2 (119-237)||(15880277-15880395)
chr2 (144-237)||(962612-962705)
chr2 (119-237)||(6421399-6421517)
chr2 (119-237)||(36178631-36178749)
chr2 (119-237)||(37105938-37106056)
chr2 (144-233)||(33953822-33953911)
chr2 (112-233)||(36178190-36178311)
chr2 (133-237)||(14745707-14745811)
chr2 (126-233)||(16542467-16542574)
chr2 (119-237)||(36005906-36006023)
chr2 (156-220)||(2336655-2336719)
chr2 (119-235)||(6422126-6422242)
chr2 (119-237)||(5542651-5542769)
chr2 (119-237)||(5543024-5543142)
chr2 (119-237)||(7598242-7598360)
chr2 (119-237)||(15511521-15511639)
chr2 (123-237)||(37106202-37106316)
chr2 (144-221)||(3594229-3594306)
chr2 (120-228)||(31385760-31385868)
chr2 (133-237)||(35580764-35580867)
chr2 (162-235)||(28254181-28254254)
chr2 (164-237)||(29676549-29676622)
chr2 (117-217)||(30312823-30312924)
chr2 (144-237)||(37895112-37895205)
chr2 (133-237)||(14745334-14745438)
chr2 (119-237)||(23346251-23346368)
chr2 (163-237)||(31899496-31899570)
chr2 (119-237)||(7598623-7598733)
chr2 (128-237)||(33954297-33954405)
chr2 (152-220)||(2323647-2323714)
chr2 (144-237)||(31468801-31468890)
chr2 (125-237)||(40733531-40733643)
chr2 (142-237)||(12910242-12910337)
chr2 (119-237)||(29676917-29677040)
chr2 (146-237)||(38796673-38796764)
chr2 (190-237)||(40163470-40163517)
chr2 (119-237)||(5367469-5367587)
chr2 (119-229)||(33731670-33731780)
chr2 (119-188)||(6421794-6421863)
chr2 (163-220)||(13154451-13154508)
chr2 (144-237)||(36178320-36178413)
chr2 (119-179)||(3672773-3672833)
chr2 (145-225)||(34481292-34481372)
chr2 (132-193)||(35580477-35580540)
chr2 (119-198)||(3673121-3673200)
chr2 (119-206)||(12529054-12529141)
chr2 (144-237)||(6712990-6713084)
chr2 (119-193)||(16590941-16591015)
chr2 (190-236)||(42515031-42515077)
chr2 (144-237)||(37632648-37632741)
chr2 (125-225)||(18204416-18204516)
[»] chr6 (44 HSPs)
chr6 (117-235)||(12092506-12092624)
chr6 (117-237)||(6071146-6071266)
chr6 (119-233)||(10074389-10074503)
chr6 (119-237)||(3409273-3409391)
chr6 (133-230)||(8481947-8482044)
chr6 (110-237)||(10073633-10073758)
chr6 (119-237)||(29518517-29518635)
chr6 (119-237)||(29518934-29519052)
chr6 (119-237)||(32741193-32741311)
chr6 (132-237)||(10074030-10074135)
chr6 (112-229)||(16107700-16107817)
chr6 (133-237)||(2378140-2378244)
chr6 (119-207)||(16454619-16454707)
chr6 (119-234)||(16454924-16455039)
chr6 (119-237)||(2578469-2578586)
chr6 (119-237)||(2579898-2580016)
chr6 (119-237)||(3415472-3415590)
chr6 (139-237)||(31714684-31714781)
chr6 (144-237)||(2377768-2377861)
chr6 (144-237)||(14748389-14748482)
chr6 (112-237)||(35210218-35210343)
chr6 (117-237)||(1127374-1127494)
chr6 (133-237)||(3058240-3058344)
chr6 (119-237)||(12071717-12071835)
chr6 (119-237)||(12085060-12085177)
chr6 (127-237)||(32460614-32460724)
chr6 (119-236)||(1846763-1846880)
chr6 (133-237)||(6999836-6999940)
chr6 (119-237)||(1950211-1950329)
chr6 (123-237)||(26544063-26544177)
chr6 (192-237)||(33605989-33606034)
chr6 (126-237)||(9062383-9062493)
chr6 (186-237)||(33605668-33605719)
chr6 (119-237)||(2579518-2579636)
chr6 (119-237)||(3409674-3409792)
chr6 (119-237)||(5832053-5832170)
chr6 (144-236)||(593760-593852)
chr6 (144-207)||(2843598-2843662)
chr6 (177-220)||(34661693-34661736)
chr6 (135-237)||(2578877-2578978)
chr6 (162-237)||(10911579-10911655)
chr6 (161-237)||(16108077-16108153)
chr6 (171-218)||(5034899-5034946)
chr6 (162-228)||(5958672-5958738)
[»] chr1 (61 HSPs)
chr1 (112-237)||(19283474-19283599)
chr1 (126-229)||(10351182-10351285)
chr1 (119-237)||(22077521-22077639)
chr1 (119-237)||(26661548-26661666)
chr1 (117-237)||(1188612-1188732)
chr1 (133-237)||(5320005-5320109)
chr1 (112-237)||(17294591-17294717)
chr1 (119-237)||(66498-66616)
chr1 (128-237)||(1187399-1187508)
chr1 (119-237)||(22793292-22793411)
chr1 (119-237)||(3537625-3537743)
chr1 (119-237)||(3875357-3875475)
chr1 (132-237)||(24600353-24600458)
chr1 (124-237)||(32594747-32594860)
chr1 (112-237)||(37850619-37850744)
chr1 (119-226)||(22077136-22077243)
chr1 (119-237)||(41142386-41142505)
chr1 (119-237)||(44290850-44290969)
chr1 (119-236)||(48588514-48588631)
chr1 (119-219)||(24448309-24448409)
chr1 (117-237)||(34364939-34365059)
chr1 (133-237)||(34649452-34649556)
chr1 (146-237)||(44290511-44290602)
chr1 (119-237)||(30630664-30630782)
chr1 (119-233)||(38804381-38804495)
chr1 (135-237)||(41157005-41157107)
chr1 (112-237)||(34364521-34364646)
chr1 (133-237)||(3550734-3550838)
chr1 (161-237)||(41184493-41184569)
chr1 (112-237)||(9955921-9956048)
chr1 (119-226)||(22077855-22077961)
chr1 (119-230)||(39066226-39066337)
chr1 (134-235)||(66128-66230)
chr1 (119-237)||(14318881-14318999)
chr1 (119-209)||(26661924-26662014)
chr1 (126-236)||(44091909-44092019)
chr1 (128-237)||(47379813-47379929)
chr1 (132-237)||(5575118-5575223)
chr1 (152-220)||(12772903-12772971)
chr1 (161-237)||(24132053-24132129)
chr1 (119-237)||(37556125-37556243)
chr1 (119-237)||(31767187-31767305)
chr1 (123-237)||(40082421-40082534)
chr1 (119-237)||(41157389-41157507)
chr1 (133-207)||(44043812-44043886)
chr1 (119-188)||(32168724-32168793)
chr1 (133-237)||(29798213-29798317)
chr1 (133-237)||(41759497-41759601)
chr1 (162-237)||(44685470-44685546)
chr1 (133-237)||(50052063-50052167)
chr1 (174-237)||(3537228-3537291)
chr1 (144-237)||(11977294-11977387)
chr1 (144-224)||(4956218-4956298)
chr1 (133-237)||(5528794-5528898)
chr1 (125-217)||(30576615-30576707)
chr1 (182-237)||(4878817-4878872)
chr1 (117-180)||(47380191-47380254)
chr1 (174-221)||(50556481-50556528)
chr1 (175-205)||(48000099-48000129)
chr1 (112-237)||(5996891-5997015)
chr1 (176-237)||(45084396-45084457)
[»] chr3 (63 HSPs)
chr3 (117-236)||(47964542-47964661)
chr3 (119-237)||(12114588-12114706)
chr3 (119-237)||(43346817-43346935)
chr3 (128-228)||(47964950-47965050)
chr3 (134-237)||(39336270-39336373)
chr3 (119-237)||(22304583-22304701)
chr3 (119-237)||(29644607-29644725)
chr3 (117-234)||(25317175-25317292)
chr3 (119-237)||(29644928-29645046)
chr3 (133-237)||(21832385-21832487)
chr3 (119-232)||(41359791-41359904)
chr3 (144-237)||(46546376-46546469)
chr3 (119-237)||(33803278-33803396)
chr3 (119-237)||(52634690-52634807)
chr3 (124-237)||(35946536-35946649)
chr3 (125-237)||(33175691-33175808)
chr3 (133-237)||(37990679-37990783)
chr3 (130-237)||(53118012-53118118)
chr3 (119-237)||(3135099-3135217)
chr3 (119-237)||(15772868-15772986)
chr3 (119-237)||(39914266-39914384)
chr3 (119-197)||(42342116-42342194)
chr3 (119-237)||(42342414-42342532)
chr3 (112-237)||(45395672-45395797)
chr3 (121-237)||(25739453-25739569)
chr3 (133-237)||(37991017-37991121)
chr3 (130-237)||(8327918-8328025)
chr3 (119-237)||(32462926-32463045)
chr3 (125-211)||(39336002-39336088)
chr3 (119-237)||(54017842-54017960)
chr3 (129-237)||(1634350-1634459)
chr3 (144-229)||(4823677-4823762)
chr3 (161-237)||(7767382-7767458)
chr3 (144-196)||(16871010-16871062)
chr3 (145-209)||(32589745-32589809)
chr3 (182-237)||(36986037-36986092)
chr3 (182-237)||(37011476-37011531)
chr3 (135-237)||(39389084-39389186)
chr3 (119-237)||(39934981-39935099)
chr3 (135-237)||(42584864-42584966)
chr3 (128-237)||(45901727-45901837)
chr3 (133-235)||(49336727-49336829)
chr3 (120-237)||(9240163-9240280)
chr3 (144-213)||(12749207-12749276)
chr3 (144-197)||(52634994-52635047)
chr3 (156-220)||(2417348-2417412)
chr3 (131-183)||(53596543-53596595)
chr3 (123-193)||(22303689-22303759)
chr3 (132-209)||(33362334-33362409)
chr3 (144-237)||(3384317-3384410)
chr3 (144-237)||(15773206-15773299)
chr3 (156-237)||(54451239-54451320)
chr3 (177-237)||(31190031-31190091)
chr3 (119-182)||(3135480-3135543)
chr3 (145-196)||(17735043-17735094)
chr3 (145-196)||(19036312-19036363)
chr3 (155-218)||(33153589-33153652)
chr3 (134-237)||(54018239-54018342)
chr3 (127-209)||(44160579-44160660)
chr3 (144-181)||(16868434-16868471)
chr3 (156-237)||(33809071-33809152)
chr3 (135-196)||(54017590-54017651)
chr3 (133-197)||(22303995-22304059)
[»] chr8 (64 HSPs)
chr8 (134-237)||(4154707-4154810)
chr8 (117-237)||(4154305-4154424)
chr8 (117-237)||(9620702-9620820)
chr8 (119-237)||(3038316-3038434)
chr8 (119-237)||(3669701-3669819)
chr8 (135-237)||(45121952-45122054)
chr8 (119-237)||(45122083-45122201)
chr8 (119-237)||(5420665-5420783)
chr8 (108-237)||(147465-147594)
chr8 (133-237)||(33113407-33113511)
chr8 (119-237)||(45122638-45122756)
chr8 (112-209)||(18372013-18372110)
chr8 (144-237)||(34835223-34835316)
chr8 (133-237)||(9608759-9608863)
chr8 (166-237)||(41972172-41972243)
chr8 (119-237)||(70300-70418)
chr8 (119-237)||(3670074-3670192)
chr8 (131-237)||(9309369-9309475)
chr8 (112-237)||(25561834-25561960)
chr8 (119-237)||(34834890-34835008)
chr8 (119-237)||(40518596-40518714)
chr8 (144-235)||(8918815-8918906)
chr8 (119-237)||(9482630-9482748)
chr8 (119-237)||(20870599-20870717)
chr8 (119-237)||(30359623-30359741)
chr8 (135-209)||(40579548-40579622)
chr8 (119-188)||(5915930-5915999)
chr8 (119-237)||(30441095-30441217)
chr8 (168-229)||(34219208-34219269)
chr8 (156-233)||(40991771-40991848)
chr8 (133-237)||(30359285-30359389)
chr8 (135-226)||(9483229-9483320)
chr8 (133-228)||(9609108-9609203)
chr8 (112-237)||(2467516-2467639)
chr8 (144-210)||(5274816-5274882)
chr8 (119-229)||(37544516-37544626)
chr8 (119-209)||(40518113-40518203)
chr8 (123-188)||(6651557-6651622)
chr8 (144-233)||(6876913-6877002)
chr8 (144-209)||(34835517-34835582)
chr8 (144-209)||(34835783-34835848)
chr8 (145-229)||(15836450-15836528)
chr8 (156-219)||(4715308-4715371)
chr8 (119-209)||(1014271-1014361)
chr8 (119-193)||(6731953-6732027)
chr8 (135-209)||(9507824-9507898)
chr8 (119-184)||(147887-147952)
chr8 (144-237)||(1513966-1514059)
chr8 (125-218)||(27856164-27856257)
chr8 (112-237)||(18371680-18371800)
chr8 (137-209)||(32305519-32305591)
chr8 (166-237)||(18373004-18373075)
chr8 (117-172)||(20995440-20995495)
chr8 (194-237)||(20995502-20995545)
chr8 (178-237)||(25561729-25561788)
chr8 (133-188)||(32640572-32640627)
chr8 (174-237)||(41416252-41416315)
chr8 (119-237)||(1013897-1014015)
chr8 (174-220)||(40417600-40417646)
chr8 (125-223)||(40417748-40417846)
chr8 (117-226)||(43398092-43398204)
chr8 (121-154)||(34629729-34629762)
chr8 (119-172)||(40579295-40579348)
chr8 (189-221)||(9620384-9620416)
[»] chr7 (50 HSPs)
chr7 (119-237)||(1085642-1085760)
chr7 (119-237)||(7517594-7517712)
chr7 (119-237)||(30244284-30244402)
chr7 (125-237)||(45434650-45434762)
chr7 (119-230)||(22567065-22567176)
chr7 (119-237)||(24177449-24177567)
chr7 (144-237)||(22566713-22566806)
chr7 (125-237)||(7554039-7554151)
chr7 (133-237)||(30245091-30245195)
chr7 (126-237)||(34218067-34218178)
chr7 (119-230)||(45433262-45433373)
chr7 (119-237)||(23403-23521)
chr7 (123-237)||(37533041-37533154)
chr7 (180-237)||(10341846-10341903)
chr7 (133-210)||(30253533-30253610)
chr7 (117-222)||(37345947-37346052)
chr7 (145-237)||(16569210-16569302)
chr7 (145-237)||(16596360-16596452)
chr7 (128-235)||(4124123-4124230)
chr7 (134-237)||(6054574-6054677)
chr7 (119-237)||(11845205-11845323)
chr7 (132-237)||(118340-118445)
chr7 (133-205)||(28300293-28300366)
chr7 (144-236)||(1085299-1085391)
chr7 (133-237)||(29157579-29157683)
chr7 (134-237)||(36534825-36534928)
chr7 (119-209)||(37533390-37533480)
chr7 (119-237)||(40094800-40094918)
chr7 (156-237)||(41910657-41910738)
chr7 (110-237)||(8128458-8128585)
chr7 (134-237)||(14681524-14681627)
chr7 (119-230)||(19122752-19122863)
chr7 (163-237)||(28301613-28301687)
chr7 (125-226)||(15902325-15902426)
chr7 (169-230)||(10342275-10342338)
chr7 (176-220)||(42282101-42282145)
chr7 (119-230)||(9901665-9901775)
chr7 (150-237)||(43241509-43241596)
chr7 (119-230)||(45754736-45754847)
chr7 (130-237)||(47129109-47129216)
chr7 (147-237)||(20599328-20599418)
chr7 (119-237)||(30032581-30032699)
chr7 (119-237)||(36939759-36939877)
chr7 (125-237)||(36622974-36623086)
chr7 (133-237)||(40230331-40230435)
chr7 (119-237)||(24838727-24838846)
chr7 (117-180)||(37345652-37345715)
chr7 (174-233)||(45335547-45335605)
chr7 (185-237)||(30255353-30255405)
chr7 (169-217)||(46899401-46899448)
[»] chr5 (55 HSPs)
chr5 (119-237)||(1028543-1028661)
chr5 (118-237)||(31509745-31509865)
chr5 (132-237)||(31509637-31509743)
chr5 (119-237)||(41632796-41632914)
chr5 (132-237)||(36568606-36568711)
chr5 (117-237)||(36521920-36522040)
chr5 (117-237)||(36522261-36522381)
chr5 (119-237)||(34753051-34753169)
chr5 (133-237)||(9498694-9498798)
chr5 (117-237)||(26074626-26074746)
chr5 (119-237)||(13415786-13415904)
chr5 (119-237)||(33747785-33747903)
chr5 (119-237)||(40296341-40296459)
chr5 (133-237)||(18603160-18603264)
chr5 (117-237)||(26074170-26074290)
chr5 (110-237)||(299503-299630)
chr5 (119-237)||(24489232-24489348)
chr5 (120-230)||(6500843-6500953)
chr5 (119-237)||(38427562-38427679)
chr5 (144-237)||(6224210-6224303)
chr5 (144-237)||(41170648-41170741)
chr5 (119-230)||(6500471-6500582)
chr5 (119-237)||(624210-624328)
chr5 (119-237)||(27502062-27502180)
chr5 (119-237)||(35150021-35150138)
chr5 (144-237)||(12662703-12662796)
chr5 (133-237)||(26075201-26075306)
chr5 (144-237)||(32487408-32487500)
chr5 (133-237)||(3295055-3295159)
chr5 (119-235)||(26590936-26591052)
chr5 (119-237)||(623832-623950)
chr5 (119-237)||(3295371-3295488)
chr5 (119-237)||(36492243-36492361)
chr5 (144-237)||(11417028-11417121)
chr5 (117-221)||(9510544-9510648)
chr5 (126-222)||(19275558-19275653)
chr5 (133-237)||(25327949-25328053)
chr5 (142-237)||(2411021-2411116)
chr5 (119-237)||(5723817-5723935)
chr5 (133-237)||(26074821-26074926)
chr5 (125-194)||(36527127-36527196)
chr5 (133-237)||(15370113-15370217)
chr5 (118-226)||(3622914-3623013)
chr5 (156-237)||(42508626-42508707)
chr5 (129-229)||(13786037-13786136)
chr5 (117-201)||(32445935-32446019)
chr5 (174-237)||(26074332-26074395)
chr5 (117-207)||(41635215-41635305)
chr5 (135-237)||(42405638-42405740)
chr5 (119-164)||(38427306-38427351)
chr5 (119-167)||(795258-795306)
chr5 (188-220)||(2828085-2828117)
chr5 (156-196)||(34103609-34103649)
chr5 (144-196)||(41340334-41340386)
chr5 (148-196)||(41341510-41341558)
[»] scaffold0078 (2 HSPs)
scaffold0078 (133-237)||(5371-5475)
scaffold0078 (112-237)||(4996-5121)
[»] scaffold0702 (2 HSPs)
scaffold0702 (144-237)||(565-658)
scaffold0702 (185-237)||(234-286)
[»] scaffold0391 (2 HSPs)
scaffold0391 (132-204)||(1730-1802)
scaffold0391 (133-237)||(1146-1250)
[»] scaffold0734 (2 HSPs)
scaffold0734 (158-237)||(5791-5870)
scaffold0734 (119-237)||(5410-5529)
[»] scaffold0807 (1 HSPs)
scaffold0807 (161-220)||(3109-3168)
[»] scaffold0113 (2 HSPs)
scaffold0113 (186-237)||(39852-39903)
scaffold0113 (119-221)||(39486-39588)
[»] scaffold0027 (1 HSPs)
scaffold0027 (119-235)||(47376-47492)
[»] scaffold0088 (1 HSPs)
scaffold0088 (161-220)||(10196-10255)
[»] scaffold0171 (1 HSPs)
scaffold0171 (156-237)||(17519-17600)


Alignment Details
Target: chr4 (Bit Score: 97; Significance: 8e-48; HSPs: 74)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 28034363 - 28034243
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    |||||||||| ||||||||||||||| |||||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28034363 agcaaccgcataagtgagagagacgccacactcttacctaaaaccttaaagcaataagtttatgggttctctcacttataaagtgttcaacctccacttt 28034264  T
Q  217 tctatccgatgtgggacatat 237  Q
    ||||||||||| |||||||||    
T  28034263 tctatccgatgcgggacatat 28034243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 760322 - 760203
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| ||||| |||||||||| | ||||| ||||| |||||||||||||||||||||||||||| ||||||||||||||||  ||||||| || |||    
T  760322 agcaaccacacaaatgagagagacaccacacttttacc-aaaatcttaaggcaatgagtttatgggtcctctcacttataaagttctcaaccttcatttt 760224  T
Q  217 tctatccgatgtgggacatat 237  Q
    ||||| |||||||||||||||    
T  760223 tctattcgatgtgggacatat 760203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 15841385 - 15841510
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| ||||||| ||||||||||||||||   ||||||||||| |||| |||||||||||| |||||||  | |||||||||| ||||||||||||||||    
T  15841385 gctagagcaaccacacaagtgagagagacatcacactcttacccaaaaccttaaggcaatgtgtttatgaatcctctcacttacaaagtgttcaacctcc 15841484  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||||||||||  |||||| |||||||    
T  15841485 acttttctatttgatgtgagacatat 15841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 34544241 - 34544128
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatc-ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactt 215  Q
    |||||||| ||||||||||||||  | ||||||||||| |||| | |||||||||||||||||||||| |||||| |||||||||| |||||||||||||    
T  34544241 agcaaccgtacaagtgagagagataccacactcttacccaaaaaccttaaggcaatgagtttatgggtcctctcatttataaagtgatcaacctccactt 34544142  T
Q  216 ttctatccgatgtg 229  Q
    |||||| |||||||    
T  34544141 ttctattcgatgtg 34544128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 36629369 - 36629251
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| |||||||| ||||| ||| |  |||||||    
T  36629369 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgtttaacttttacttttc 36629270  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  36629269 tatccgatgtgggacatat 36629251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 4955334 - 4955459
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| ||||||||||||||| |||||||||| ||||||||||| |||| |||||||||||| ||||||| || |||| |||||||| |||||||||||      
T  4955334 gctagagcaaccgcacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctta 4955433  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||| || |||||||| || |||||||    
T  4955434 actattttatccgatatgagacatat 4955459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 2740826 - 2740714
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 224  Q
    |||||||||||||||||| |||||||||| ||||| ||||||||  || |||||| ||| |||| |||||||| |||||||||||  ||| |||||||||    
T  2740826 cacaagtgagagagacgccacactcttacgtaaaaccttaaggctctgggtttataggtcctcttacttataaggtgttcaacctttactgttctatccg 2740727  T
Q  225 atgtgggacatat 237  Q
    |||||||||||||    
T  2740726 atgtgggacatat 2740714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 117 - 228
Target Start/End: Original strand, 23556888 - 23556999
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| ||||||| |||||||||  ||||||||| | ||||  |||||||||||| ||||||| |||||| | ||||||| |||||||||||||||||    
T  23556888 agcaaccacacaagtaagagagacgtcacactcttatccaaaactttaaggcaatgattttatggattctcttatttataaaatgttcaacctccacttt 23556987  T
Q  217 tctatccgatgt 228  Q
    ||||||||||||    
T  23556988 tctatccgatgt 23556999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 50630779 - 50630897
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  50630779 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataatgtgttcaacctttactattt 50630878  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||| ||||||||    
T  50630879 tatccgatgtaggacatat 50630897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 54109044 - 54108928
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  54109044 caaccgcacaagcaagagagacaccacactcttacccaaaa-cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 54108946  T
Q  219 tatccgatgtgggacata 236  Q
    ||||||||||||||||||    
T  54108945 tatccgatgtgggacata 54108928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 3244482 - 3244593
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    ||||||||||||||||  ||| ||||||| ||||  ||||| |||||||||||||||| |||| ||||||||  ||||||||||  ||||||||||||||    
T  3244482 acaagtgagagagacgacacattcttacccaaaactttaagacaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccga 3244581  T
Q  226 tgtgggacatat 237  Q
    |||| |||||||    
T  3244582 tgtgagacatat 3244593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 15841016 - 15841126
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    |||||||||||||||  |||||||||||| |||| ||||| |||||| |||||| | | |||||||||||||| |||||| |||||||||||||||| ||    
T  15841016 acaagtgagagagacaatacactcttacccaaaa-cttaaagcaatgggtttatagatcctctcacttataaaatgttcagcctccacttttctatctga 15841114  T
Q  226 tgtgggacatat 237  Q
    | ||||||||||    
T  15841115 tatgggacatat 15841126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 22183288 - 22183406
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||| ||||||||||||||||| ||||||||| | |||| |||||||||||| |||||||||| || | ||||||||| |||||||| |  ||| ||     
T  22183288 caaccgtacaagtgagagagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtccttttacttataaattgttcaacatttactcttt 22183387  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||| ||||    
T  22183388 tatccgatgtgggatatat 22183406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 50002558 - 50002440
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||| |||||||| | ||||||||||| |||| |||||| |||||  ||||||||| |||| ||||| ||||||||||||||  ||| ||     
T  50002558 caaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttaaaaagtgttcaacctttactcttt 50002459  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||||||| |||||||    
T  50002458 tatccgatgtgagacatat 50002440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 16888865 - 16888958
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| | |||| |||||||||||| |||||||| |||||||| || ||||||||  ||||||||||||||||||||||||||    
T  16888865 acactcttacccaaaaccgtaagacaatgagtttataggttctcttacttataaggtattcaacctttacttttctatccgatgtgggacatat 16888958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 20826324 - 20826231
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||| ||||||||| |  ||| || |||||||||||||||||||    
T  20826324 acactcttacctaaaatgttaaggctatgggtttatgggttctcttacttataacgtgttcaacttttactattttatccgatgtgggacatat 20826231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 41707499 - 41707606
Alignment:
Q  129 agtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgt 228  Q
    |||||||||||| | ||||||||||| |||| |||||| ||||||||||||||||||| | |||||||  |||||||||||  ||| || ||||||||||    
T  41707499 agtgagagagacaccacactcttacc-aaaaccttaagacaatgagtttatgggttcttttacttatatggtgttcaacctttactcttttatccgatgt 41707597  T
Q  229 gggacatat 237  Q
    |||||||||    
T  41707598 gggacatat 41707606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 114 - 237
Target Start/End: Complemental strand, 44620796 - 44620674
Alignment:
Q  114 tatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccac 213  Q
    |||| ||||||||||||  |||||||  | ||||||||||| |||| |||||||  ||| |||||||||| |||| ||||||||||||||||||||| ||    
T  44620796 tataacaaccgcacaagcaagagagaaaccacactcttacccaaaaccttaaggttatg-gtttatgggtcctcttacttataaagtgttcaacctctac 44620698  T
Q  214 ttttctatccgatgtgggacatat 237  Q
    | ||  ||||||||||||||||||    
T  44620697 tatttcatccgatgtgggacatat 44620674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 39792884 - 39793002
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||||||||| || | ||||  ||||||| ||||||||| |  |||||||    
T  39792884 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttacggttcctctttcttataaggtgttcaacatttacttttc 39792983  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  39792984 tatctgatgtgggacatat 39793002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 18932766 - 18932887
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||||| ||||| | ||||| |||||||| | |||||||||||||||| |||||||||||| |||||||||| |||| | |||||| || ||||||||      
T  18932766 gctataacaaccactcaagtaagagagacaccacactcttacctaaaaccttaaggcaatgggtttatgggtcctcttatttataaggtattcaaccttt 18932865  T
Q  212 acttttctatccgatgtgggac 233  Q
    ||| || |||||||||| ||||    
T  18932866 actattttatccgatgtaggac 18932887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 34646687 - 34646791
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||| || |||| | |||||| ||||||||| |  ||| || ||||||||||||||    
T  34646687 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttagttataaggtgttcaacatttactgttttatccgatgtggga 34646786  T
Q  233 catat 237  Q
    |||||    
T  34646787 catat 34646791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 133 - 236
Target Start/End: Complemental strand, 45496923 - 45496820
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| |||||| |||||||||||| ||| |||| |||||||| |||||||||||  ||  || ||||||||||||||    
T  45496923 agagagacaccacactcttacccaaaaccttaagacaatgagtttataggtcctcttacttataaggtgttcaacctttacgattttatccgatgtggga 45496824  T
Q  233 cata 236  Q
    ||||    
T  45496823 cata 45496820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 54741213 - 54741320
Alignment:
Q  130 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 229  Q
    ||||||||||  ||||||||||| | |||| |||||| ||||  || ||||||| |||| |||||||| |||||||||||  ||||||||||||||||||    
T  54741213 gtgagagagagactacactcttatccaaaaccttaagacaatctgtgtatgggtcctcttacttataaggtgttcaacctttacttttctatccgatgtg 54741312  T
Q  230 ggacatat 237  Q
     |||||||    
T  54741313 agacatat 54741320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 129 - 232
Target Start/End: Complemental strand, 54936318 - 54936215
Alignment:
Q  129 agtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgt 228  Q
    |||||||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| ||||| || |||||||||||  ||| || |||| |||||    
T  54936318 agtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgt 54936219  T
Q  229 ggga 232  Q
    ||||    
T  54936218 ggga 54936215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 55933155 - 55933266
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    |||||| |||||||| | ||||||||||| ||||  ||||||||||| |||||||||| |||| |||||||| ||||||||||   ||| || |||||||    
T  55933155 acaagtaagagagacaccacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacccttactattttatccga 55933254  T
Q  226 tgtgggacatat 237  Q
    ||| ||||||||    
T  55933255 tgtaggacatat 55933266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 25483468 - 25483350
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||| | |||| ||||||||  ||||||||||  ||| ||     
T  25483468 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcttacttataagatgttcaacctttactattt 25483369  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||||||| |||||||    
T  25483368 tatccgatgtgagacatat 25483350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 32941147 - 32941265
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||||  ||||||||||| |||| |||||||||||||||||||| |  |||| | |||||| |||||||||||  ||| |||    
T  32941147 caaccgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgagtttatgagccctcttatttataaggtgttcaacctttactgttc 32941246  T
Q  219 tatccgatgtgggacatat 237  Q
    | ||||||||  |||||||    
T  32941247 tttccgatgtaagacatat 32941265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 39404150 - 39404060
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||| ||||||  |||||||||| ||||||||||| |||| ||||| || ||||||||||| || |||| ||||||||||||||||||||    
T  39404150 caaccacacaagcaagagagacgccacactcttacccaaaaccttaatgctatgagtttatgagtcctcttacttataaagtgttcaacct 39404060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 44620460 - 44620367
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||||||||| ||||||||| ||||| | |||||| |||||||||||  ||| || |||||||||||| ||||||    
T  44620460 acactcttacccaaaaccttaaggcaatgggtttatgggctctcttatttataaggtgttcaacctttactgttttatccgatgtggaacatat 44620367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 54017644 - 54017737
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||||||| |||||||||||| |||||||||| |||| ||||||||  ||||||||||  ||| || |||| || |||||||||||    
T  54017644 acactcttacctaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatctgacgtgggacatat 54017737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 41370475 - 41370371
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| ||||||||||||| ||||  ||||||||||| |||||||||| |||| |||||||| || |||||| |  ||| || |||||||| |||||    
T  41370475 agagagacactacactcttacccaaaactttaaggcaatgggtttatgggtcctcttacttataaggttttcaacatttactattttatccgatttggga 41370376  T
Q  233 catat 237  Q
    |||||    
T  41370375 catat 41370371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 236
Target Start/End: Complemental strand, 44621133 - 44621017
Alignment:
Q  120 aaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 219  Q
    |||||||||||  ||||| || | ||||||||||| |||| |||||| ||||||||||||| |  |||| |||||||| |||||||||||  ||| || |    
T  44621133 aaccgcacaagcaagagaaacaccacactcttacccaaaaccttaagacaatgagtttatgtgccctcttacttataaggtgttcaacctttactgtttt 44621034  T
Q  220 atccgatgtgggacata 236  Q
    |||||||||||| ||||    
T  44621033 atccgatgtgggtcata 44621017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 138 - 237
Target Start/End: Complemental strand, 2741184 - 2741085
Alignment:
Q  138 gacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||| ||||||||||| |||| ||||||||||||   |||||||| |||| |||||||| || ||||||||  ||| ||||||| ||||||||||||||    
T  2741184 gacgccacactcttacccaaaaccttaaggcaatggagttatgggtcctcttacttataaggtattcaacctttactattctatctgatgtgggacatat 2741085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 52884828 - 52884709
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacct-aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||||||||||  |||||||| | |||||||||||  |||| |||||||||||| |||||| | |  ||| |||||||| |||||||||||  ||| ||    
T  52884828 caaccgcacaagcaagagagacaccacactcttaccccaaaaccttaaggcaatgggtttatcgatcatcttacttataaggtgttcaacctttactatt 52884729  T
Q  218 ctatccgatgtgggacatat 237  Q
     |||||||||||||||||||    
T  52884728 ttatccgatgtgggacatat 52884709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 22027985 - 22028103
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| || ||| ||||||||| | ||| ||||||| |||| |||||||||||  |||||||||| |||| |||||||| |||||||||||    | ||     
T  22027985 caaccacataagcgagagagacaccacattcttacccaaaaccttaaggcaatatgtttatgggtcctcttacttataaggtgttcaacctttcgtattt 22028084  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  22028085 tatccgatgtgggacatat 22028103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 28034572 - 28034526
Alignment:
Q  7 ggtatactataggaagcgtatgtctaccgagaagactcattcttata 53  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||    
T  28034572 ggtatactataggcagcgtatgtctaccgagaagactcattcttata 28034526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 34004609 - 34004698
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    |||||||||||| ||||||||||  ||||||||| | |||| ||||||| ||||||||||||||| |||| ||||||||  ||||||||||    
T  34004609 caaccgcacaagggagagagacggcacactcttatcgaaaaccttaagg-aatgagtttatgggtcctcttacttataagttgttcaacct 34004698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 36572151 - 36572033
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||||||| ||||||||| | | ||||| ||| |||| ||||||||||||  |||||||||  ||| |||||||| ||||||||| |  ||| ||     
T  36572151 caaccgcacaagcgagagagacaccatactctaacccaaaaccttaaggcaatggatttatgggtcttcttacttataaggtgttcaacatttactcttt 36572052  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| |||||||||||||||    
T  36572051 tattcgatgtgggacatat 36572033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 52885007 - 52884901
Alignment:
Q  132 gagagagacgctacactcttacct-aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgg 230  Q
    ||||||||| | ||| |||||||  |||| |||||||||||| |||||||| | |||| |||||||| |||||||||||  ||| || ||||||||||||    
T  52885007 gagagagacaccacattcttaccccaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgg 52884908  T
Q  231 gacatat 237  Q
    |||||||    
T  52884907 gacatat 52884901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 3341235 - 3341142
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| ||||||||||  ||||||  |||||||| |||| |||||||||||||| |||||  ||| || ||||| |||||||||||||    
T  3341235 acactcttacccaaaatcttaaaacaatgatgttatgggtcctcttacttataaagtgtttaacctttactcttttatccaatgtgggacatat 3341142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 197
Target Start/End: Complemental strand, 31691271 - 31691206
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 197  Q
    |||| |||||| ||||||||||| |||| ||||||||||||||||||||||| |||| ||||||||    
T  31691271 gagatagacgccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataa 31691206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 54017751 - 54017844
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||||||| |||||| ||||| |  ||||||| |||| |||||||| |||||||||||  ||| || |||||||||||||| ||||    
T  54017751 acactcttacctaaaaccttaagacaatgggaatatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggatatat 54017844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 49880278 - 49880174
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | || |||||||| |||| ||||||||| || |||||||||| |||| |||||||| |||||||||||  ||| || ||| | ||||||||    
T  49880278 agagagacaccacgctcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgttcaacctttactattttattcaatgtggga 49880179  T
Q  233 catat 237  Q
    |||||    
T  49880178 catat 49880174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 1731671 - 1731789
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  ||||| || | ||||||||||| |||| |||||||||||  |||||||||| |||| | ||||||  ||||||||||  ||| ||     
T  1731671 caaccacacaagcaagagaaacaccacactcttacccaaaaccttaaggcaattggtttatgggtcctcttatttataagatgttcaacctttactgttt 1731770  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  1731771 tatctgatgtgggacatat 1731789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 11348396 - 11348470
Alignment:
Q  163 taaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| | ||||| | |||||||||||||||||||||||||||||| || |||| ||||| | ||||||    
T  11348396 taaggcaatgaatatatggatcctctcacttataaagtgttcaacctccactattttatctgatgtagaacatat 11348470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 22028393 - 22028483
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||| ||||||  |||||||| | ||||||||||| ||||  ||||| |||||||||||||||| |||| ||| |||| |||||||||||    
T  22028393 caacctcacaagcaagagagacaccacactcttacccaaaacattaagacaatgagtttatgggtcctcttactaataaggtgttcaacct 22028483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 36608685 - 36608803
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||| |||||||||||| | ||||||||||| |||| |||||| |||||  ||||||| | |||| |||||| | ||||||||| |  ||| ||     
T  36608685 caaccacactagtgagagagacaccacactcttacccaaaaccttaagacaatggatttatggatcctcttacttatgaggtgttcaacttttactcttt 36608784  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||| ||||||||    
T  36608785 tatccgatgttggacatat 36608803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 49303034 - 49302918
Alignment:
Q  123 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcac--ttataaagtgttcaacctccacttttcta 220  Q
    |||| |||| ||||| || | ||||||||||| |||| |||||||||||| |||||||||| |||| ||  ||||||  ||||||||||  |||||| ||    
T  49303034 cgcataagtaagagatacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttttataagatgttcaacctttactttttta 49302935  T
Q  221 tccgatgtgggacatat 237  Q
    |  ||||||||||||||    
T  49302934 tttgatgtgggacatat 49302918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 228
Target Start/End: Original strand, 6876131 - 6876230
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    ||||||||||||||||  ||||| ||| | |||| |||||| | ||| |||||| ||||||||  |||||||||||||| ||||||| |||| |||||||    
T  6876131 acaagtgagagagacgtcacacttttatccaaaaccttaagtcgatgcgtttattggttctct--cttataaagtgttcgacctccagtttt-tatccga 6876227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 3340939 - 3340849
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||| ||||||  ||| |||| | ||||||||||| |||| ||||||||| || |||||||||| |||| |||||||| ||| |||||||    
T  3340939 caaccccacaagcaagaaagacaccacactcttacccaaaaccttaaggcagtgggtttatgggtcctcttacttataaggtgctcaacct 3340849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 20825968 - 20825850
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| |||  ||||| || | ||||||||||| |||| |||||||| |   |||||||||| |||| | |||||| |||||||||||  ||| ||     
T  20825968 caaccgcataaggaagagaaacaccacactcttacccaaaaccttaaggctaaaggtttatgggtgctcttatttataaggtgttcaacctttactcttt 20825869  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||| ||||||    
T  20825868 tatccgatgtggaacatat 20825850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 39404530 - 39404412
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||| |||| || |||| |||||||| ||  |||||||||| |||| |||||||| |||||| ||||  ||| ||     
T  39404530 caaccacacaagcaagagagacaccacattcttgcccaaaaccttaaggctataggtttatgggtcctcttacttataaggtgttccacctttactcttt 39404431  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  39404430 tatctgatgtgggacatat 39404412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 50459853 - 50459735
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | || ||||||||||||| ||||||  |||| ||||||| || |||| ||||||||  ||||||||||  ||| ||     
T  50459853 caaccacacaagcaagagagacaccacgctcttacctaaaaccttaagataatgggtttatgagtcctcttacttataagatgttcaacctttactcttt 50459754  T
Q  219 tatccgatgtgggacatat 237  Q
    || ||||||||| ||||||    
T  50459753 taaccgatgtggaacatat 50459735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 54343046 - 54343143
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| ||||||||||||       |||| |||| |||||||| |||||||||||  ||| || ||||||||||||||    
T  54343046 agagagacaccacactcttacccaaaaccttaaggcaatg-------gggtcctcttacttataaggtgttcaacctttactattttatccgatgtggga 54343138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 3271894 - 3271841
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 197  Q
    ||||||||||| |||| |||||||||||  ||||||||||||||| ||||||||    
T  3271894 acactcttacccaaaaccttaaggcaataggtttatgggttctcttacttataa 3271841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 10246026 - 10245934
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| ||||||||  || |||||||| | |||| |||||||| |||||||||||  ||| || ||||||||||||| |||||    
T  10246026 acactcttacccaaaaccttaaggctttgggtttatgg-tcctcttacttataaggtgttcaacctttactcttttatccgatgtggggcatat 10245934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 6975494 - 6975598
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||||| ||||||||||| |||||||||||  ||||  |||||| || |||| ||||||||  | ||||||||  ||| || |||| |||||| ||    
T  6975494 agagagacgccacactcttacccaaaatcttaagataatggatttatgagtcctcttacttataagatattcaacctttactattttatcggatgtgaga 6975593  T
Q  233 catat 237  Q
    |||||    
T  6975594 catat 6975598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 7147703 - 7147766
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    |||| |||||| || || ||||| |||| |||||||||| |||||||||||||||||||||||||    
T  7147703 aaaaccttaagacattgggtttacgggtcctctcactta-aaagtgttcaacctccacttttcta 7147766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 23817719 - 23817783
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 197  Q
    |||||||| | ||||||||||| |||| ||||||||||||||||||||  | |||| ||||||||    
T  23817719 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgaatcctcttacttataa 23817783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 41603270 - 41603314
Alignment:
Q  174 gtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||  |||||||||||||||| ||||||||||||||||    
T  41603270 gtttatgggtcttctcacttataaagtgctcaacctccacttttc 41603314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 43827571 - 43827485
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaa 206  Q
    ||||||||||||| |||||||| | ||||||||| | |||  ||||||||||||| ||||||||| |||| | |||||| | ||||||    
T  43827571 caaccgcacaagtaagagagacaccacactcttatccaaac-cttaaggcaatgaatttatgggtcctcttatttataaggagttcaa 43827485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 49076855 - 49076944
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||||||||||  ||| |||| | ||||||| ||| |||| |||||||  ||| ||||||||||||||| || ||||| |||||||||||    
T  49076855 caaccgcacaagcaagaaagacaccacactctaacccaaaaccttaaggttatgggtttatgggttctcttac-tataaggtgttcaacct 49076944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 54108669 - 54108551
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagttt-atgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||| ||||||  ||| |||| | ||||||||| | |||| ||||||||||||| ||| |||||| || | |||||||| |||||||||||  ||| ||    
T  54108669 caaccacacaagcaagatagacaccacactcttagccaaaaccttaaggcaatgaattttatgggtccttttacttataaggtgttcaacctttactatt 54108570  T
Q  218 ctatccgatgtgggacata 236  Q
     ||||| || |||||||||    
T  54108569 ttatcctatatgggacata 54108551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 4390125 - 4390238
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||| |||||||  |||||||||  ||||||||||| |||| ||||| |||||| | | | || | |||| |||||||| |||||||||||  ||| ||     
T  4390125 caactgcacaagcaagagagacgtcacactcttacccaaaaccttaacgcaatgtgctaaaggatcctcttacttataaggtgttcaacctttactcttt 4390224  T
Q  219 tatccgatgtggga 232  Q
    |||| |||||||||    
T  4390225 tatctgatgtggga 4390238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 217
Target Start/End: Complemental strand, 23630411 - 23630338
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||| ||||| ||| ||||||| |  |||||||||| ||  |||||||||||||||||||||| | |||||||    
T  23630411 acacttttacccaaagtcttaagacgttgagtttatgagtcgtctcacttataaagtgttcaactttcactttt 23630338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 174 - 223
Target Start/End: Original strand, 31249937 - 31249986
Alignment:
Q  174 gtttatgggttctctcacttataaagtgttcaacctccacttttctatcc 223  Q
    |||||||||| |||| |||||||||||||||||| | ||| |||||||||    
T  31249937 gtttatgggtcctctaacttataaagtgttcaacattcacctttctatcc 31249986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 1868158 - 1868106
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    ||||||||||| ||||  ||||||||||| |||||||||||| ||| ||||||    
T  1868158 acactcttacccaaaactttaaggcaatgggtttatgggttccctctcttata 1868106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 175 - 207
Target Start/End: Original strand, 6875857 - 6875889
Alignment:
Q  175 tttatgggttctctcacttataaagtgttcaac 207  Q
    |||||||||||||||||||||||| ||||||||    
T  6875857 tttatgggttctctcacttataaaatgttcaac 6875889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 196
Target Start/End: Complemental strand, 10396250 - 10396186
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    ||||||||| | || ||||||||||||| | |||||||||| ||||||||||  |||| ||||||    
T  10396250 gagagagacaccaccctcttacctaaaaccctaaggcaatgggtttatgggtcttctctcttata 10396186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 135 - 179
Target Start/End: Original strand, 11706584 - 11706628
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttat 179  Q
    |||||||| ||||||||||| |||| ||||| |||||||||||||    
T  11706584 agagacgccacactcttacccaaaaccttaaagcaatgagtttat 11706628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 16889574 - 16889678
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | | ||||||||| ||||  |||||||| |  |||||||  | |||| |||||||| || ||||||||  ||||||||||||||| || ||    
T  16889574 agagagacaccatactcttacccaaaactttaaggcagtaggtttatgaatcctcttacttataaggtattcaacctttacttttctatccgatttgaga 16889673  T
Q  233 catat 237  Q
    |||||    
T  16889674 catat 16889678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 29802636 - 29802576
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    |||| ||||||||| || |||||||||| |||||| || | ||||| ||||||||||||||    
T  29802636 aaaaccttaaggcattgggtttatgggtcctctcagttgtcaagtgctcaacctccacttt 29802576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 45484814 - 45484774
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    |||| ||||||||| || |||||||||||||||||||||||    
T  45484814 aaaaccttaaggcattgggtttatgggttctctcacttata 45484774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 230
Target Start/End: Original strand, 48111733 - 48111833
Alignment:
Q  130 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 229  Q
    ||||||||||| | |||||| ||||||||| ||||||| ||||  |||||  || || | |||||||| |||||||||||  ||| || ||||||| |||    
T  48111733 gtgagagagacaccacactcatacctaaaaccttaaggtaatggatttataagtccttttacttataatgtgttcaacctttactcttttatccgaggtg 48111832  T
Q  230 g 230  Q
    |    
T  48111833 g 48111833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 89; Significance: 5e-43; HSPs: 62)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 30313311 - 30313192
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||| ||||||||||| ||||||||||||||||||||    
T  30313311 agcaaccacacaagtgagagagacgccacactcttacccaaaatcttaaggcaatgagtttttgggtcctctcacttat-aagtgttcaacctccacttt 30313213  T
Q  217 tctatccgatgtgggacatat 237  Q
    ||||||||||||| |||||||    
T  30313212 tctatccgatgtgagacatat 30313192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 29874047 - 29874167
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    |||||||||||||||| || |||||| ||||||||| | |||| |||||||||||| |||||||||| ||| || |||||||||||||||||||||||||    
T  29874047 agcaaccgcacaagtgggatagacgccacactcttatccaaaaccttaaggcaatgggtttatgggtcctcccaattataaagtgttcaacctccacttt 29874146  T
Q  217 tctatccgatgtgggacatat 237  Q
    |||||| ||||||||||||||    
T  29874147 tctatctgatgtgggacatat 29874167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 29873561 - 29873679
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| |||||||||||||||||  ||||||||||  |||| |||||||||||||||||||| || ||| |||||||||| |||||||||||||||||    
T  29873561 agcaaccacacaagtgagagagacgtcacactcttactcaaaaccttaaggcaatgagtttatgagtcctcccacttataaaatgttcaacctccacttt 29873660  T
Q  217 tctatccgatgtgggacat 235  Q
    |||||| ||||||||||||    
T  29873661 tctatctgatgtgggacat 29873679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 40679655 - 40679773
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||||||| ||| ||||||||||||||| |||||||| ||||||||||   |||||||    
T  40679655 caaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggttctcttacttataaggtgttcaacccttacttttc 40679754  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||| ||||||||||    
T  40679755 tatccgatatgggacatat 40679773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 30323581 - 30323478
Alignment:
Q  134 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    ||||||||| ||||||||||| |||| ||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||||||||| ||| ||||||    
T  30323581 gagagacgccacactcttacccaaaaccttaaggcaatgagtttataggtcctctcacttctaaagtgttcaacctccaattttctatctgatttgggac 30323482  T
Q  234 atat 237  Q
    ||||    
T  30323481 atat 30323478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 42514781 - 42514663
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||| |||||||||| ||||||||||| ||||||||||||| ||| |||||||||| |||| |||||||| |||||||||||  |||||||    
T  42514781 caaccccacaagtaagagagacgccacactcttacccaaaatcttaaggcgatgggtttatgggtcctcttacttataaggtgttcaacctttacttttc 42514682  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||| ||||||||    
T  42514681 tatctgatgtaggacatat 42514663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 28254276 - 28254381
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 231  Q
    ||||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| ||||||||  ||||||||||  ||||||||||||||||||||    
T  28254276 gagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataagatgttcaacctttacttttctatccgatgtggg 28254375  T
Q  232 acatat 237  Q
    ||||||    
T  28254376 acatat 28254381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 28531333 - 28531458
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| |||||| ||| || |||||||| | | ||||||||||| |||||||||||||||||||||||||||  |||| |||||||| |||||||||||      
T  28531333 gctagagcaactgcataactgagagagtcaccacactcttacccaaaatcttaaggcaatgagtttatgggacctcttacttataaggtgttcaaccttt 28531432  T
Q  212 acttttctatccgatgtgggacatat 237  Q
     |||||||||||||||||||||||||    
T  28531433 gcttttctatccgatgtgggacatat 28531458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 33561502 - 33561595
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||||||| ||||||| ||||||    
T  33561502 acactcttacccaaaaccttaagacaatgagtttatgggtcctctcacttataaagtgtttaacctccacttttctatctgatgtggaacatat 33561595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 41283515 - 41283619
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  ||| || |||||||| |||||    
T  41283515 agagagacgccacactcttacctaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatatggga 41283614  T
Q  233 catat 237  Q
    |||||    
T  41283615 catat 41283619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 41678401 - 41678511
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    |||||||||||||||| |||||||||||  |||| |||||||||| | |||||||||| ||||||||||||||||||| ||||||| |||||||||| ||    
T  41678401 acaagtgagagagacgttacactcttactcaaaaccttaaggcaaag-gtttatgggtcctctcacttataaagtgtttaacctccccttttctatctga 41678499  T
Q  226 tgtgggacatat 237  Q
    |||| |||||||    
T  41678500 tgtgagacatat 41678511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 15880395 - 15880277
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  15880395 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttt 15880296  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||| ||||||    
T  15880295 tatccgatgtggaacatat 15880277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 962705 - 962612
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||| ||||| |||||||||| ||||||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  962705 acactcttacccaaaaccttaagacaatgggtttatgggtcctctcacttataaggtgttcaacctttacttttctatccgatgtgggacatat 962612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 6421517 - 6421399
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| || ||||||||||||||||| || |||| |||||||| |||||||||||  ||| ||     
T  6421517 caaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactcttt 6421418  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  6421417 tatccgatgtgggacatat 6421399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 36178631 - 36178749
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  36178631 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 36178730  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  36178731 tatccgatgtgggacatat 36178749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 37106056 - 37105938
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||| |||||  |||||||| | ||||||||||| |||||||||||||||||||||||||||| | || |||||||| |||||||||||  ||| ||     
T  37106056 caaccgtacaagcaagagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtccccttacttataaggtgttcaacctttactattt 37105957  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| |||||||||||||||    
T  37105956 tattcgatgtgggacatat 37105938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 33953822 - 33953911
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    ||||||||||| ||||| |||||||||   |||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  33953822 acactcttacccaaaattttaaggcaacaggtttatgggtcctctcacttatatagtgttcaacctccacttttctatctgatgtgggac 33953911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 233
Target Start/End: Original strand, 36178190 - 36178311
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||||| ||||| ||||||  |||||| | | ||||||||||| ||||||||||||||||| |||||||||||| || |||||||| |||||||||||      
T  36178190 gctataacaaccacacaagcaagagaggcaccacactcttacccaaaatcttaaggcaatgggtttatgggttcccttacttataaggtgttcaaccttt 36178289  T
Q  212 acttttctatccgatgtgggac 233  Q
    ||| || |||||||||||||||    
T  36178290 actattttatccgatgtgggac 36178311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 14745707 - 14745811
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||| ||||||||    
T  14745707 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccaatgtggga 14745806  T
Q  233 catat 237  Q
    |||||    
T  14745807 catat 14745811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 126 - 233
Target Start/End: Complemental strand, 16542574 - 16542467
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    |||||||||||||| |||||||||||||  ||||||||||||||||||||||||  || |||| | |||||| |||||||||||  ||| || |||||||    
T  16542574 acaagtgagagagatgctacactcttactcaaaatcttaaggcaatgagtttataagtcctcttatttataaggtgttcaacctttactattttatccga 16542475  T
Q  226 tgtgggac 233  Q
    ||||||||    
T  16542474 tgtgggac 16542467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 36005906 - 36006023
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||||| ||||| ||||| |||| ||||||||||||||||||||||| |||| |||||||| ||||||||| |  || ||||    
T  36005906 caaccccacaagcaagagagacgccacacttttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacttttac-tttc 36006004  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| |||||||||||||||    
T  36006005 tattcgatgtgggacatat 36006023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 2336719 - 2336655
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    |||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||    
T  2336719 aaaatcttaaggcattgaatttatgggtcctctcacttataaagtgttcaacctccacttttcta 2336655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 235
Target Start/End: Complemental strand, 6422242 - 6422126
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | |||||||||||||||| |||||||| ||| |||||||||| |||| | |||||| |||||||||||  ||||||     
T  6422242 caaccacacaagcaagagagacaccacactcttacctaaaaccttaaggctatgggtttatgggtcctcttaattataatgtgttcaacctttacttttt 6422143  T
Q  219 tatccgatgtgggacat 235  Q
    |||| ||||||||||||    
T  6422142 tatctgatgtgggacat 6422126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 5542651 - 5542769
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||  |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  5542651 caaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattt 5542750  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| |||| ||||||||||    
T  5542751 tattcgatatgggacatat 5542769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 5543024 - 5543142
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  | |||||| | ||||||||||| ||||||||||||||||  |||||||| | |||| |||||||| |||||||||||  ||| ||     
T  5543024 caaccgcacaagcaatagagacaccacactcttacccaaaatcttaaggcaataggtttatggatcctcttacttataaggtgttcaacctttactattt 5543123  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  5543124 tatcggatgtgggacatat 5543142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 7598360 - 7598242
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||||||||||||||||| | | | ||||||| |||| |||||||| |||||||||||||| |||| | |||||| ||||| |||||  |||||||    
T  7598360 caaccgcacaagtgagagagacaccatattcttacccaaaaccttaaggctatgagtttatgggtcctcttatttataaggtgttgaacctttacttttc 7598261  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| |||||| | ||||||    
T  7598260 tattcgatgtagaacatat 7598242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 15511521 - 15511639
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||||| ||||||||||| ||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  15511521 caaccacacaagcaagagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcctcttacttataacgtgttcaacctttactcttt 15511620  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||| |||| |||||||    
T  15511621 tatccgttgtgtgacatat 15511639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 37106316 - 37106202
Alignment:
Q  123 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 222  Q
    ||||||||  ||||| || | ||||||||||| |||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||    
T  37106316 cgcacaagcaagagaaacaccacactcttacccaaaaccttaaggaaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatc 37106217  T
Q  223 cgatgtgggacatat 237  Q
    |||||||||||||||    
T  37106216 cgatgtgggacatat 37106202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 221
Target Start/End: Original strand, 3594229 - 3594306
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctat 221  Q
    ||||||||||  |||||||||| |||||| |||||||| | || ||||||||||||||||| ||||||||||||||||    
T  3594229 acactcttactcaaaatcttaaagcaatgtgtttatggatcctatcacttataaagtgttcgacctccacttttctat 3594306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 120 - 228
Target Start/End: Complemental strand, 31385868 - 31385760
Alignment:
Q  120 aaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 219  Q
    |||| ||||||||| |||||| | |||||  | || |||| |||||||||||| |||||||||| || |||||||||| ||| |||||||||| ||||||    
T  31385868 aaccacacaagtgaaagagacaccacacttattcccaaaaccttaaggcaatgggtttatgggtcctttcacttataaggtgctcaacctccatttttct 31385769  T
Q  220 atccgatgt 228  Q
    | |||||||    
T  31385768 aaccgatgt 31385760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 35580764 - 35580867
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    ||||||||||  |||||||||| |||| |||||||||||| |||||| ||| ||||||||||||| ||||||||| |  | | || ||||||||||||||    
T  35580764 agagagacgccgcactcttacccaaaaccttaaggcaatgggtttat-ggtcctctcacttataaggtgttcaacatttattgttttatccgatgtggga 35580862  T
Q  233 catat 237  Q
    |||||    
T  35580863 catat 35580867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 162 - 235
Target Start/End: Original strand, 28254181 - 28254254
Alignment:
Q  162 ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacat 235  Q
    ||||||||| | ||||||| || |||| ||||||||||||||||||||  |||||||||||||||||| |||||    
T  28254181 ttaaggcaaagtgtttatgagtcctcttacttataaagtgttcaacctttacttttctatccgatgtgagacat 28254254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 164 - 237
Target Start/End: Complemental strand, 29676622 - 29676549
Alignment:
Q  164 aaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||  ||| || ||||| ||||| |||||||    
T  29676622 aaggcaatgagtttatgggttctctcacttataatgtgttcaatctttactcttttatccaatgtgagacatat 29676549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 217
Target Start/End: Complemental strand, 30312924 - 30312823
Alignment:
Q  117 agcaaccgcacaagt-gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactt 215  Q
    ||||||||||||| | |||||||||   ||||| ||||| |||| ||||||| ||| |||||||||||  ||| | ||||||||||||||||||||||||    
T  30312924 agcaaccgcacaaattgagagagactacacacttttacccaaaaccttaaggaaataagtttatgggtcatctaagttataaagtgttcaacctccactt 30312825  T
Q  216 tt 217  Q
    ||    
T  30312824 tt 30312823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 37895112 - 37895205
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||||||||| ||||||| ||||| | |||| ||| || |||||| |  | ||||||||||||||||||||||||    
T  37895112 acactcttacccaaaaccttaaggcaatgggtttatgtgttcttttacttttaaggttttcaacttttatttttctatccgatgtgggacatat 37895205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 14745334 - 14745438
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||||||||| |||  ||||| ||  |||||||||   ||| || ||| ||||||||||    
T  14745334 agagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcatacttacaagatgttcaaccattactattttattcgatgtggga 14745433  T
Q  233 catat 237  Q
    |||||    
T  14745434 catat 14745438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 23346368 - 23346251
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  ||||||||   ||||||||||| |||| |||||||| ||| |||||||||  |||| | |||||| ||||| |||||  |||||||    
T  23346368 caaccgcacaagcaagagagacatcacactcttaccgaaaaccttaaggctatgggtttatgggccctctta-ttataaggtgtttaacctttacttttc 23346270  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| ||||||| |||||||    
T  23346269 tatacgatgtgagacatat 23346251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 31899496 - 31899570
Alignment:
Q  163 taaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||||||||||||| |||| |||||||| ||||||||| |  ||| || |||||||||||| ||||||    
T  31899496 taaggcaatgagtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtggaacatat 31899570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 7598733 - 7598623
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||||||||||||| | ||||||||||| ||||  ||||||        |||||||| |||| |||||||| |||||||||||  ||||||     
T  7598733 caaccacacaagtgagagagacaccacactcttaccaaaaacgttaagg--------ttatgggtcctcttacttataaggtgttcaacctttacttttt 7598642  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  7598641 tatctgatgtgggacatat 7598623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 33954297 - 33954405
Alignment:
Q  128 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 227  Q
    ||||||||||||||| ||||||||||| |||||| |||||||  || |||||| ||  | | | ||||| | |||| |||||| ||||||||||| ||||    
T  33954297 aagtgagagagacgccacactcttacccaaaatcgtaaggcataga-tttatgagtcatttaagttatataatgtttaacctcaacttttctatctgatg 33954395  T
Q  228 tgggacatat 237  Q
    ||||||||||    
T  33954396 tgggacatat 33954405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 2323714 - 2323647
Alignment:
Q  152 acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    |||||||| ||||||||| || |||||||| | |||||||||||||||||| ||||||||| |||||||    
T  2323714 acctaaaaccttaaggcattg-gtttatggatcctctcacttataaagtgtccaacctccatttttcta 2323647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 31468801 - 31468890
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||    |||||  | ||||||||  ||| || |||||||||||||||||||    
T  31468801 acactcttacccaaaaccttaaggcaatgagtttatgggtcctct----tataagatattcaacctttactattttatccgatgtgggacatat 31468890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 40733643 - 40733531
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 224  Q
    |||||| ||||||||| | ||||||||||| ||||  ||||||   |  |||||||||| |||| |||||||| ||||||||| |  |||||| |||| |    
T  40733643 cacaagcgagagagacaccacactcttacccaaaactttaaggttgtaggtttatgggtcctcttacttataaggtgttcaacatttacttttttatctg 40733544  T
Q  225 atgtgggacatat 237  Q
    |||||||||||||    
T  40733543 atgtgggacatat 40733531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 12910337 - 12910242
Alignment:
Q  142 ctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||||| |||| |||||| |||||| |||||  ||  | |||||||||| | |||||||||  ||||||| ||||||||||| ||||||    
T  12910337 ctacactcttacccaaaaccttaagacaatgaatttataagtcatttcacttataaggggttcaacctgtacttttccatccgatgtggaacatat 12910242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 29677040 - 29676917
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatggg-----ttctctcacttataaagtgttcaacctccac 213  Q
    ||||| ||||| | |||||||| | |||||||||| ||||  |||||||||||| |||||||||     | ||||||| ||||| ||||| |||||  ||    
T  29677040 caaccccacaattaagagagacaccacactcttacttaaagccttaaggcaatgggtttatgggtcttctcctctcacctataaggtgttaaacctttac 29676941  T
Q  214 ttttctatccgatgtgggacatat 237  Q
    | || |||||||||||||||||||    
T  29676940 tcttttatccgatgtgggacatat 29676917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 38796673 - 38796764
Alignment:
Q  146 actcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||| |||| ||||||||| |  |||||||||| |||| |||||||| |||||||||||  | | || |||| ||||||||||||||    
T  38796673 actcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacctttattgttttatcagatgtgggacatat 38796764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 190 - 237
Target Start/End: Original strand, 40163470 - 40163517
Alignment:
Q  190 acttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||| |||||||||||  ||||||||||||||||||||||||||    
T  40163470 acttataaggtgttcaacctttacttttctatccgatgtgggacatat 40163517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 5367587 - 5367469
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||| |||||||  |||||||||| ||||||||||| |||| |||||||  ||| ||| |||| |  ||| |||||||| |||||||||||   || ||     
T  5367587 caactgcacaagcaagagagacgccacactcttacccaaaaccttaaggttatgtgttcatggatcatcttacttataaggtgttcaacctttgctcttt 5367488  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||| ||||||||||    
T  5367487 tatccgatctgggacatat 5367469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 229
Target Start/End: Complemental strand, 33731780 - 33731670
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| |||  |||||||| | | ||||||||| |||| |||||||||||  |||||||| | |||| |||||||| ||| |||||||  ||| ||     
T  33731780 caaccgcataagcaagagagacaccatactcttacccaaaaccttaaggcaataggtttatggatcctcttacttataaggtgctcaacctttactcttt 33731681  T
Q  219 tatccgatgtg 229  Q
    |||||||||||    
T  33731680 tatccgatgtg 33731670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 6421863 - 6421794
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctct 188  Q
    ||||| ||||||| |||||||| | ||||||||||| |||| |||||||||||  |||||||||| ||||    
T  6421863 caaccacacaagttagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctct 6421794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 163 - 220
Target Start/End: Original strand, 13154451 - 13154508
Alignment:
Q  163 taaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    |||| |||||||||||| |||| | |  ||||||||||||||||||||||||||||||    
T  13154451 taagacaatgagtttattggttattttccttataaagtgttcaacctccacttttcta 13154508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 36178320 - 36178413
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||| ||||| ||||||| || | || |||||||| |||||| ||||  ||| || ||||||| |||||||||||    
T  36178320 acactcttacccaaaaccttaagacaatgggtttatgagtccccttacttataaggtgttccacctttactattttatccgaagtgggacatat 36178413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 3672833 - 3672773
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttat 179  Q
    ||||| ||||| | |||||||| | ||||||||||| ||||||||||||||||| ||||||    
T  3672833 caaccacacaattaagagagacaccacactcttacccaaaatcttaaggcaatgggtttat 3672773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 225
Target Start/End: Complemental strand, 34481372 - 34481292
Alignment:
Q  145 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    |||||||||| |||| ||||| ||||| | ||||| | |||| ||| ||||||| | |||||||||||||||| |||||||    
T  34481372 cactcttacccaaaaccttaaagcaataaatttatagattctatcatttataaaatattcaacctccacttttatatccga 34481292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 193
Target Start/End: Original strand, 35580477 - 35580540
Alignment:
Q  132 gagagagacgctacactct--tacctaaaatcttaaggcaatgagtttatgggttctctcactt 193  Q
    ||||||||||| |||||||  |||| |||| ||||||||||||||||||||||| ||| |||||    
T  35580477 gagagagacgccacactctcttacccaaaaccttaaggcaatgagtttatgggtcctcacactt 35580540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 198
Target Start/End: Complemental strand, 3673200 - 3673121
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaa 198  Q
    ||||| ||| ||| ||||||||   ||||||||| | |||||||||| ||||||||||||||| | |||| |||||||||    
T  3673200 caaccacactagtaagagagacatcacactcttagccaaaatcttaaagcaatgagtttatggatcctcttacttataaa 3673121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 12529054 - 12529141
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaa 206  Q
    |||||||||||   |||||||| ||||  ||||| ||||||  ||||||||||||||||||| || |||| |||||||  ||||||||    
T  12529054 caaccgcacaaacaagagagacactacgttcttatctaaaactttaaggcaatgagtttatgagtcctcttacttatacggtgttcaa 12529141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 6713084 - 6712990
Alignment:
Q  144 acactcttacctaaaatc-ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| | |||| |||||  |||||||||| |||| |||||||| ||||||||| |  ||| || ||||||||||| |||||||    
T  6713084 acactcttacccaaaaaccttaaagcaataggtttatgggtcctcttacttataaggtgttcaacatttactgttttatccgatgtgagacatat 6712990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 16591015 - 16590941
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcactt 193  Q
    ||||| ||||||| ||||||||  || | |||||| ||||| |||||||||||| |||||||||| |||| ||||    
T  16591015 caaccccacaagtaagagagacattagattcttacttaaaaccttaaggcaatgtgtttatgggtcctcttactt 16590941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 236
Target Start/End: Complemental strand, 42515077 - 42515031
Alignment:
Q  190 acttataaagtgttcaacctccacttttctatccgatgtgggacata 236  Q
    |||||||| ||||| |||||  |||||||||||||||||||||||||    
T  42515077 acttataaggtgtttaacctttacttttctatccgatgtgggacata 42515031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 37632648 - 37632741
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| ||||| |  ||| |||||||||| |||| ||||||||| |||  |||||  ||| || |||||||||| ||||||||    
T  37632648 acactcttacccaaaaccttaaagttatgggtttatgggtcctcttacttataaaatgtcaaacctttactattttatccgatgtaggacatat 37632741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 18204416 - 18204516
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 224  Q
    ||||| |||||||||| | ||| | ||||||||||  ||||  |||||||||||||||| || ||| |||| || || |||| |||| |||||||| |||    
T  18204416 cacaaatgagagagacaccacatttttacctaaaacattaaaacaatgagtttatgggtcctttcatttattaaatgctcaatctccgcttttctaaccg 18204515  T
Q  225 a 225  Q
    |    
T  18204516 a 18204516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 79; Significance: 5e-37; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 235
Target Start/End: Original strand, 12092506 - 12092624
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| |||||||||||||||| | ||| ||||||  |||| ||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  12092506 agcaacctcacaagtgagagagacaccacagtcttactcaaaaccttaaggcaatgagtttatggatcctctcacttataaagtgctcaacctccacttt 12092605  T
Q  217 tctatccgatgtgggacat 235  Q
    |||||||||||||||||||    
T  12092606 tctatccgatgtgggacat 12092624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 6071266 - 6071146
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    |||||||  ||||| ||||||||||| ||||||||| | |||||||||||||||||||||||||| |  |||||||||||||||||||||||||||||||    
T  6071266 agcaaccatacaagcgagagagacgccacactcttatccaaaatcttaaggcaatgagtttatggatcatctcacttataaagtgttcaacctccacttt 6071167  T
Q  217 tctatccgatgtgggacatat 237  Q
    ||||| | |||||||||||||    
T  6071166 tctattcaatgtgggacatat 6071146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 10074389 - 10074503
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||| |||||||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  |||||||    
T  10074389 caaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttacttttc 10074488  T
Q  219 tatccgatgtgggac 233  Q
    |||||||||||||||    
T  10074489 tatccgatgtgggac 10074503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 3409391 - 3409273
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  ||| ||     
T  3409391 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattt 3409292  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  3409291 tatctgatgtgggacatat 3409273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 133 - 230
Target Start/End: Complemental strand, 8482044 - 8481947
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgg 230  Q
    |||||||| | ||||||||||| ||||||||||||||||||||||||| ||  ||||| |||||||||||||||||||||||||| |||| |||||||    
T  8482044 agagagacaccacactcttacccaaaatcttaaggcaatgagtttatgagtcatctcatttataaagtgttcaacctccacttttatatctgatgtgg 8481947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 10073633 - 10073758
Alignment:
Q  110 atgctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    |||||| | ||||| ||| |||||||||||| | ||||||||||| ||||||||||| |||||||||||||| | |||| |||||||| |||||||||||    
T  10073633 atgctagaacaaccacactagtgagagagacaccacactcttacccaaaatcttaagccaatgagtttatggatcctcttacttataaggtgttcaacct 10073732  T
Q  210 ccacttttctatccgatgtgggacatat 237  Q
      |||||||  |||||||||||||||||    
T  10073733 ttacttttc--tccgatgtgggacatat 10073758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 29518635 - 29518517
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  29518635 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 29518536  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  29518535 tatccgatgtgggacatat 29518517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 29519052 - 29518934
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  29519052 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 29518953  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  29518952 tatccgatgtgggacatat 29518934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 32741311 - 32741193
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  32741311 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattt 32741212  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  32741211 tatccgatgtgggacatat 32741193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 10074030 - 10074135
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 231  Q
    ||||||||| | ||||| ||||| |||| |||||||||||| |||||||||| |||| |||||||| ||||||||| |  ||||||||||||||||||||    
T  10074030 gagagagacaccacacttttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacgtttacttttctatccgatgtggg 10074129  T
Q  232 acatat 237  Q
    | ||||    
T  10074130 atatat 10074135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 229
Target Start/End: Complemental strand, 16107817 - 16107700
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| ||||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| ||||||| || |||| |||||||| ||||| |||||      
T  16107817 gctagagcaaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtttaaccttt 16107718  T
Q  212 acttttctatccgatgtg 229  Q
    |||||| |||||||||||    
T  16107717 acttttttatccgatgtg 16107700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 2378244 - 2378140
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||| |||||||||||| ||||||| |||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||||||||    
T  2378244 agagagacaccacattcttacctaaaaccttaaggtaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtggga 2378145  T
Q  233 catat 237  Q
    |||||    
T  2378144 catat 2378140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 16454707 - 16454619
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaac 207  Q
    ||||||||||||  |||||||||| ||||||||| | ||||||||||||||||| |||||||||| |||| |||||||| |||||||||    
T  16454707 caaccgcacaagcaagagagacgccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaac 16454619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 234
Target Start/End: Complemental strand, 16455039 - 16454924
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||||||||  |||||||||| || | |||||||| |||||||||||  ||| ||     
T  16455039 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctattacttataaggtgttcaacctttactcttt 16454940  T
Q  219 tatccgatgtgggaca 234  Q
    |||| |||||||||||    
T  16454939 tatctgatgtgggaca 16454924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 2578469 - 2578586
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  | |||||| | ||||||||||| |||| |||||||| ||| |||||||||| |||| ||||||||||||||||||||  ||| ||     
T  2578469 caaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaagtgttcaacctttactcttt 2578568  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||| ||||||||||||    
T  2578569 tatccg-tgtgggacatat 2578586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 2579898 - 2580016
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||| ||||||| |||| ||||||||  || |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  2579898 caaccgcacaagcaagagagacaccacattcttacccaaaaccttaaggctgtgggtttatgggtcctcttacttataatgtgttcaacctttactcttt 2579997  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  2579998 tatccgatgtgggacatat 2580016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 3415590 - 3415472
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||  |||||||||||  ||| ||     
T  3415590 caaccgcacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattt 3415491  T
Q  219 tatccgatgtgggacatat 237  Q
    |||  ||||||||||||||    
T  3415490 tatgtgatgtgggacatat 3415472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 237
Target Start/End: Complemental strand, 31714781 - 31714684
Alignment:
Q  139 acgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||| ||||||||||  |||| |||||||||||||||| |||||| |||||| ||||| |  |||||||||||||||||||||||||||| ||||||||    
T  31714781 acgccacactcttactcaaaaccttaaggcaatgagttaatgggtcctctca-ttatataacgttcaacctccacttttctatccgatgtaggacatat 31714684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 2377861 - 2377768
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || || ||||||||||||||||    
T  2377861 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatat 2377768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 14748389 - 14748482
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| ||||| ||||||||||||||||| |||| | |||||| |||||||||||  ||| || |||||||||||||||||||    
T  14748389 acactcttacccaaaaccttaacgcaatgagtttatgggtcctcttatttataaggtgttcaacctttactattttatccgatgtgggacatat 14748482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 35210343 - 35210218
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| ||||||||||||||  | ||| || | ||||||||||| |||| ||||||||||||  ||||||||| |||| |||||||| |||||||||||      
T  35210343 gctagagcaaccgcacaagcaaaagaaacaccacactcttacccaaaaccttaaggcaatggttttatgggtcctcttacttataaggtgttcaaccttt 35210244  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||| || ||||||||||| |||||||    
T  35210243 actattttatccgatgtgagacatat 35210218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 1127494 - 1127374
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| || |||| |||||||||| ||||||||||| |||| ||||||| |||| ||||||| || |||| |||||||| |||||||||||  ||| |    
T  1127494 agcaaccacataagtaagagagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtgttcaacctttactat 1127395  T
Q  217 tctatccgatgtgggacatat 237  Q
    | || ||||||||||| ||||    
T  1127394 tttacccgatgtgggatatat 1127374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 3058344 - 3058240
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| |||||||||||| |||||||| | |||  |||||||| |||||||||||  ||| || ||||||||||||||    
T  3058344 agagagacaccacactcttacccaaaaccttaaggcaatgggtttatggatcctcatacttataaggtgttcaacctttactattttatccgatgtggga 3058245  T
Q  233 catat 237  Q
    |||||    
T  3058244 catat 3058240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 12071717 - 12071835
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||||||||||||||| ||||||||||| |||| |||||||  ||  ||||||| || || ||  ||||||||||||||| ||||| |||||    
T  12071717 caaccacacaagtgagagagacgccacactcttacccaaaaccttaaggtcataggtttatgagtcctttctattataaagtgttcaaactccatttttc 12071816  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| |||| | |||||||    
T  12071817 tatctgatgcgagacatat 12071835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 12085060 - 12085177
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||||||||||||||| ||||||||||| |||| |||||||| |||  |||||| || || ||  ||||||||||||||| |||||| ||||    
T  12085060 caaccacacaagtgagagagacgccacactcttacccaaaaccttaaggccatggttttatgagtcctttctattataaagtgttcaaactccac-tttc 12085158  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||  ||||||||    
T  12085159 tatctgatgcaggacatat 12085177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 127 - 237
Target Start/End: Original strand, 32460614 - 32460724
Alignment:
Q  127 caagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgat 226  Q
    ||||||||| ||| |  ||||||||||| |||| |||||||||||| ||||||| || |||| |||||||| |||||||||||  ||| || ||| ||||    
T  32460614 caagtgagaaagatgtcacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatacgat 32460713  T
Q  227 gtgggacatat 237  Q
    |||||||||||    
T  32460714 gtgggacatat 32460724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 119 - 236
Target Start/End: Complemental strand, 1846880 - 1846763
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  | |||||| | ||||||||| | |||| ||||||||||||  ||||||||| |||| |||||||| |||||||||||  ||| ||     
T  1846880 caaccgcacaagcaaaagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtgctcttacttataaggtgttcaacctttactattt 1846781  T
Q  219 tatccgatgtgggacata 236  Q
    ||||||||||| ||||||    
T  1846780 tatccgatgtgagacata 1846763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 6999836 - 6999940
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||||| ||||||||| | |||| ||||||||| ||||||||||| | |||| || ||||| ||||||||| |  |||||| |||||||||| |||    
T  6999836 agagagacgccacactcttatccaaaaccttaaggcagtgagtttatggatcctcttacatataaggtgttcaacttttacttttttatccgatgtagga 6999935  T
Q  233 catat 237  Q
    |||||    
T  6999936 catat 6999940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 1950211 - 1950329
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||| |||||||||  ||||||||||  |||| ||||||||| |   ||||||| | |||| |||| ||| |||||||||||  ||| ||     
T  1950211 caaccgcacaagtaagagagacgtcacactcttactcaaaaccttaaggcattagatttatggctcctcttacttgtaaggtgttcaacctttactcttt 1950310  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  1950311 tatccgatgtgggacatat 1950329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 26544177 - 26544063
Alignment:
Q  123 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 222  Q
    ||||||||  ||||||||   ||||||||||  |||| ||||||||  || |||||||||| |||| |||||||| |||||||||||  ||| || ||||    
T  26544177 cgcacaagcaagagagacatcacactcttactcaaaaccttaaggcggtgggtttatgggtcctcttacttataacgtgttcaacctttactattttatc 26544078  T
Q  223 cgatgtgggacatat 237  Q
    |||||||||||||||    
T  26544077 cgatgtgggacatat 26544063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 33606034 - 33605989
Alignment:
Q  192 ttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||||||||||||||||||||| |||||||||||||||    
T  33606034 ttataaagtgttcaacctccacttttctattcgatgtgggacatat 33605989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 9062383 - 9062493
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    |||||| |||||||  | ||||| ||||| |||| |||||| ||||||||||||| || |||| ||||||||  ||||||||||  ||| || |||||||    
T  9062383 acaagtaagagagataccacacttttacccaaaa-cttaagacaatgagtttatgagtcctcttacttataagatgttcaacctttactattttatccga 9062481  T
Q  226 tgtgggacatat 237  Q
    ||||||||||||    
T  9062482 tgtgggacatat 9062493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 33605719 - 33605668
Alignment:
Q  186 tctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||| ||||||||||||||||||||||||||||||| |||||| |||||||    
T  33605719 tctcaattataaagtgttcaacctccacttttctatctgatgtgagacatat 33605668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 2579518 - 2579636
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | | ||| ||||| |||| ||||||||||||||||||||||  |||| |||||||| || | | ||||  ||||||     
T  2579518 caaccacacaagcaagagagacaccatacttttacccaaaaccttaaggcaatgagtttatgggccctcttacttataaggtatccgacctttacttttt 2579617  T
Q  219 tatccgatgtgggacatat 237  Q
    | |||||||||||||||||    
T  2579618 tgtccgatgtgggacatat 2579636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 3409792 - 3409674
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| ||||  | ||||||||| |||||||||| |||| ||||||||  |||||||| |  ||| ||     
T  3409792 caaccgcacaagcaagagagacaccacactcttacccaaaaaataaaggcaatgggtttatgggtcctcttacttataagatgttcaacttttactattt 3409693  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||| ||||||    
T  3409692 tatctgatgtggtacatat 3409674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 5832053 - 5832170
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||| |||||||| | ||||| ||||| ||||||||||||   ||  ||||||||| |||| |||||||| |||||||||||  ||| ||     
T  5832053 caaccacacaagtaagagagacaccacacttttacccaaaatcttaagggg-tggctttatgggtcctcttacttataaggtgttcaacctttactcttt 5832151  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||| |||||||||||||    
T  5832152 tatccaatgtgggacatat 5832170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 593760 - 593852
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacata 236  Q
    ||||| ||||| |||| ||||||||| |  ||||||| || |||| |||||||| |||||||||||  ||| || ||||||||||||||||||    
T  593760 acactattacccaaaaccttaaggcagtcggtttatgagtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacata 593852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 2843662 - 2843598
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttat-gggttctctcacttataaagtgttcaac 207  Q
    ||||||||||| |||| ||||||||||||||||||| |||| |||| |||||||| |||||||||    
T  2843662 acactcttacccaaaaccttaaggcaatgagtttatggggtcctcttacttataaggtgttcaac 2843598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 220
Target Start/End: Original strand, 34661693 - 34661736
Alignment:
Q  177 tatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  34661693 tatgggttctcttacttataaagtgatcaacctccacttttcta 34661736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 2578877 - 2578978
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 234  Q
    |||||| | ||||||||||| |||| ||||||| ||||||||||||| | |||| | |||||| || |||||| |  |||||| ||||||||| ||||||    
T  2578877 agagacaccacactcttacccaaaaccttaaggtaatgagtttatggatcctcttatttataaggtattcaacatttactttt-tatccgatgagggaca 2578975  T
Q  235 tat 237  Q
    |||    
T  2578976 tat 2578978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 10911655 - 10911579
Alignment:
Q  162 ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccac-ttttctatccgatgtgggacatat 237  Q
    ||||||||||||||||||| || |||| |||||||| |||||||||||  || |||| |||| ||||| ||||||||    
T  10911655 ttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactttttttatctgatgtaggacatat 10911579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 16108153 - 16108077
Alignment:
Q  161 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||| |||||||||| |||| |||||||| ||||||||| |  ||| || |||| ||||||| ||||||    
T  16108153 cttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacatttactcttttatctgatgtggaacatat 16108077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 171 - 218
Target Start/End: Original strand, 5034899 - 5034946
Alignment:
Q  171 tgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||| ||||||  |||||||||||||||| ||||||||||||||||    
T  5034899 tgagttgatgggtcatctcacttataaagtggtcaacctccacttttc 5034946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 228
Target Start/End: Original strand, 5958672 - 5958738
Alignment:
Q  162 ttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgt 228  Q
    ||||| ||||||||||||| ||||||| | |||||| |||||||||||  ||| || ||||||||||    
T  5958672 ttaagacaatgagtttatgagttctcttatttataaggtgttcaacctttactgttttatccgatgt 5958738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 78; Significance: 2e-36; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 19283474 - 19283599
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| |||||||||||||||||||||||||| ||||||||| | |||| |||||||| ||||||||||| || |||||| ||| |||||| |||||||||    
T  19283474 gctagagcaaccgcacaagtgagagagacgccacactcttatccaaaaccttaaggcgatgagtttatgtgtcctctcatttacaaagtgctcaacctcc 19283573  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||||||||||||| ||||||||||||    
T  19283574 acttttctatccggtgtgggacatat 19283599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 126 - 229
Target Start/End: Complemental strand, 10351285 - 10351182
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    ||||||||||||||||| ||||||||||| |||||||||| | |||| ||||||||||||||||||||||||||||||||||||| | ||||||||| ||    
T  10351285 acaagtgagagagacgccacactcttacccaaaatcttaaagtaatgtgtttatgggttctctcacttataaagtgttcaacctctatttttctatctga 10351186  T
Q  226 tgtg 229  Q
    ||||    
T  10351185 tgtg 10351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 22077521 - 22077639
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| ||||||||||||||| ||||||||||| |||| |||||||| | |||||||||||| |||| |||||||| |||||||||||  |||||||    
T  22077521 caaccgcataagtgagagagacgccacactcttacccaaaaccttaaggctacgagtttatgggtcctcttacttataaggtgttcaacctttacttttc 22077620  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||||||| |||||||    
T  22077621 tatccgatgtgagacatat 22077639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 26661548 - 26661666
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||| ||||||||| | ||||||||||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||  ||| ||     
T  26661548 caaccacacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctctcacttataaggtgttcaacctttactcttt 26661647  T
Q  219 tatccgatgtgggacatat 237  Q
    || ||||||||||||||||    
T  26661648 tacccgatgtgggacatat 26661666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 1188612 - 1188732
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| || ||||||||||||||| ||||| ||||| |||| ||||| |||||||||||||| ||  ||||||||||||| | |||||||||||||||    
T  1188612 agcaaccacataagtgagagagacgccacacttttacccaaaaccttaaagcaatgagtttatgagtcttctcacttataaaatattcaacctccacttt 1188711  T
Q  217 tctatccgatgtgggacatat 237  Q
    |||||||||| ||| ||||||    
T  1188712 tctatccgatatggaacatat 1188732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 5320005 - 5320109
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| ||||||||||||| |||| |||||||| |||||||||||||| ||||||||||||| ||||||||| |  ||||||||||||||||||| |    
T  5320005 agagagacactacactcttacccaaaaccttaaggctatgagtttatgggtcctctcacttataaggtgttcaacttttacttttctatccgatgtggaa 5320104  T
Q  233 catat 237  Q
    |||||    
T  5320105 catat 5320109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 17294717 - 17294591
Alignment:
Q  112 gctatagcaacc-gcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctc 210  Q
    |||| ||||||| ||| ||| ||||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| ||||||||||||||||||||     
T  17294717 gctagagcaacctgcataagcgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctt 17294618  T
Q  211 cacttttctatccgatgtgggacatat 237  Q
     ||| || |||||||||||||||||||    
T  17294617 tactcttttatccgatgtgggacatat 17294591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 66498 - 66616
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||||||| ||||||||||||| ||||||||| |||| |||||||| ||  |||||||| | |||| |||||||| |||||||||||  |||||||    
T  66498 caaccgcacaagcgagagagacgctatactcttacccaaaaccttaaggccatatgtttatggatcctcttacttataaggtgttcaacctttacttttc 66597  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||| ||| ||||||    
T  66598 tatccgatatggaacatat 66616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 1187399 - 1187508
Alignment:
Q  128 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 227  Q
    ||||||||||||||  ||||| ||||  |||||||||||| |||||||||||||||  ||||||||||||| |||| ||||||||||||| ||| |||||    
T  1187399 aagtgagagagacgtcacacttttactcaaaatcttaaggtaatgagtttatgggtcttctcacttataaaatgtttaacctccacttttatattcgatg 1187498  T
Q  228 tgggacatat 237  Q
    || |||||||    
T  1187499 tgagacatat 1187508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 22793411 - 22793292
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaa-tgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||| ||||||| |||||||||  ||||||||||  |||| | |||||||| || |||||||| | |||||||||||||||| ||||||||| ||||||    
T  22793411 caaccacacaagtaagagagacgtcacactcttactcaaaaccgtaaggcaaatgggtttatggatcctctcacttataaagttttcaacctctactttt 22793312  T
Q  218 ctatccgatgtgggacatat 237  Q
    |||| |||||||||||||||    
T  22793311 ctatacgatgtgggacatat 22793292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 3537625 - 3537743
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||| ||||| |||||| ||| |||| ||| |||| |||||||||||  ||| ||     
T  3537625 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaagccaatgggtttataggtcctcttactcataaggtgttcaacctttactattt 3537724  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  3537725 tatccgatgtgggacatat 3537743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 3875357 - 3875475
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||| |||||||||||| | ||| |||||||||||| |||||||||||| ||||||| || |||| |||||||| |||| ||||||  ||||||     
T  3875357 caaccacactagtgagagagactccacattcttacctaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtgtacaacctttacttttt 3875456  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||||||| |||||||    
T  3875457 tatccgatgtgtgacatat 3875475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 24600353 - 24600458
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 231  Q
    ||||||||| | ||||||||||  |||| |||||| ||||||||||||| ||||||| ||||||||  ||||||||||  ||||||||||||||| ||||    
T  24600353 gagagagacaccacactcttacacaaaaccttaagacaatgagtttatgagttctcttacttataatatgttcaacctttacttttctatccgatatggg 24600452  T
Q  232 acatat 237  Q
    ||||||    
T  24600453 acatat 24600458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 124 - 237
Target Start/End: Original strand, 32594747 - 32594860
Alignment:
Q  124 gcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatcc 223  Q
    |||||||| |||||||| | ||||||||||| |||| |||||| |||||||||||||||| |||| |||||||| |||||||||||  ||| || ||||     
T  32594747 gcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatct 32594846  T
Q  224 gatgtgggacatat 237  Q
    ||||| ||||||||    
T  32594847 gatgtaggacatat 32594860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 37850619 - 37850744
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| |||||||||||||||||||||||| | ||||||||| |  ||| |||||  || |  ||||||||||||||| |||||||| ||||||||||||     
T  37850619 gctagagcaaccgcacaagtgagagagacaccacactcttatccgaaaccttaaaacattaggtttatgggttctcttacttataaggtgttcaacctct 37850718  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||| || ||| |||||||||||||||    
T  37850719 actgttttatgcgatgtgggacatat 37850744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 22077136 - 22077243
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| ||||||| ||||||  ||||||||| | |||| |||| |||||||||||||||||| |||| |||||||| || ||||||||  |||||||    
T  22077136 caaccgcataagtgagggagacgtcacactcttatccaaaaccttagggcaatgagtttatgggtcctcttacttataaggtattcaacctttacttttc 22077235  T
Q  219 tatccgat 226  Q
    ||||||||    
T  22077236 tatccgat 22077243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 41142505 - 41142386
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactctt-acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||| ||||||  |||||||||| |||||||| ||| |||| |||||||||||| |||||||||| || | |||||||| |||||||||||  ||| ||    
T  41142505 caaccacacaagcaagagagacgccacactctttaccaaaaaccttaaggcaatgggtttatgggtccttttacttataaggtgttcaacctttactgtt 41142406  T
Q  218 ctatccgatgtgggacatat 237  Q
     |||||||||||||||||||    
T  41142405 ttatccgatgtgggacatat 41142386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 44290850 - 44290969
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactctt-acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||||||||||  ||||| || | |||||||| ||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||    
T  44290850 caaccgcacaagcaagagatacaccacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactatt 44290949  T
Q  218 ctatccgatgtgggacatat 237  Q
     |||||||||||||||||||    
T  44290950 ttatccgatgtgggacatat 44290969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 119 - 236
Target Start/End: Original strand, 48588514 - 48588631
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||| |||||||| |  |||||||||| |||| ||||||||||||| |||| ||||  ||| |||||||| |||||||||||  ||| ||     
T  48588514 caaccgcacaagtaagagagacaccgcactcttacccaaaaccttaaggcaatgaatttacgggtcttcttacttataaggtgttcaacctttactattt 48588613  T
Q  219 tatccgatgtgggacata 236  Q
    |||||||||| |||||||    
T  48588614 tatccgatgtcggacata 48588631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 219
Target Start/End: Complemental strand, 24448409 - 24448309
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| || |||||||||| |||| ||||| ||| | ||||||||||| ||||||||||||| |  |||||||||||||| |||||||| ||||||||||    
T  24448409 caacctcataagtgagagacacgccacacttttatccaaaatcttaagacaatgagtttatgagccctctcacttataaaatgttcaacttccacttttc 24448310  T
Q  219 t 219  Q
    |    
T  24448309 t 24448309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 34365059 - 34364939
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    |||||| ||| ||| ||||||||| | ||||||||||| |||| |||||||| ||| |||||||||| |||| |||||||| |||||||||||  | | |    
T  34365059 agcaactgcataagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttacttataaggtgttcaacctttattat 34364960  T
Q  217 tctatccgatgtgggacatat 237  Q
    | ||||||||||| |||||||    
T  34364959 tttatccgatgtgtgacatat 34364939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 34649556 - 34649452
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    ||||||||||  |||||||||| |||| ||||||||| |  |||||||||||||  ||||||||| |||||||||||  ||| || ||||||||||||||    
T  34649556 agagagacgcctcactcttacccaaaaccttaaggcattaggtttatgggttcttgcacttataaggtgttcaacctttactcttttatccgatgtggga 34649457  T
Q  233 catat 237  Q
    |||||    
T  34649456 catat 34649452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 146 - 237
Target Start/End: Original strand, 44290511 - 44290602
Alignment:
Q  146 actcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||| |||| |||||||||||| |||||||||| |||| ||||||||  ||||||||||  ||| || |||||||||||||||||||    
T  44290511 actcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatat 44290602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 30630664 - 30630782
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| || |||||| || |||||  |||||||||| ||||  ||||||||||| ||||||||||||||| |||||||||||||  |||||  | ||||     
T  30630664 caaccacataagtgatagggacgccccactcttacccaaaactttaaggcaatgtgtttatgggttctcttacttataaagtgtcaaacctttaattttt 30630763  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||||||| |||||||    
T  30630764 tatccgatgtgagacatat 30630782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 233
Target Start/End: Original strand, 38804381 - 38804495
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| ||||||||||||| |||| |||||||  ||| |||||||| | |||| |||||||| |||||||||||  ||| ||     
T  38804381 caaccgcacaagcaagagagacactacactcttacccaaaaccttaaggttatgggtttatggatcctcttacttataatgtgttcaacctttactcttt 38804480  T
Q  219 tatccgatgtgggac 233  Q
    ||| |||||||||||    
T  38804481 tattcgatgtgggac 38804495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 41157107 - 41157005
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 234  Q
    |||||| | ||||||||||| |||| ||||| ||||||||||||||||| |||| |||||||| |||||||||||  ||| || |||||| | |||||||    
T  41157107 agagacaccacactcttacccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgttatgggaca 41157008  T
Q  235 tat 237  Q
    |||    
T  41157007 tat 41157005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 34364646 - 34364521
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| |||||||||| ||| |||||||||   ||||||||||| |||| |||||||| ||| ||||| || | |||| |||||||| |||||||||||      
T  34364646 gctagagcaaccgcataagcgagagagacatcacactcttacccaaaaccttaaggctatgggtttacggatcctcttacttataaggtgttcaaccttt 34364547  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||| || ||||||||||| |||||||    
T  34364546 actattttatccgatgtgagacatat 34364521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 3550838 - 3550734
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| ||||  ||||||||||| ||||||| || |||| |||||||| |||||||||||  ||| || |||| |||||||||    
T  3550838 agagagacaccacactcttacccaaaactttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatctgatgtggga 3550739  T
Q  233 catat 237  Q
    |||||    
T  3550738 catat 3550734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 41184493 - 41184569
Alignment:
Q  161 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||| |||||||||| |||| ||||||||||||||||||||  ||| || ||||||||||| |||||||    
T  41184493 cttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattttatccgatgtgagacatat 41184569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 9956048 - 9955921
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagttt-atgggttctctcacttataaagtgttcaacctc 210  Q
    |||| ||||||||||||||  ||||||||   ||||||||||| |||| |||||||||||  |||| |||||| |||| |||||||| |||||||||||     
T  9956048 gctagagcaaccgcacaagcaagagagacatcacactcttacccaaaaccttaaggcaattggtttaatgggtcctcttacttataatgtgttcaacctt 9955949  T
Q  211 cac-ttttctatccgatgtgggacatat 237  Q
     || |||| |||| ||||||||||||||    
T  9955948 tactttttttatctgatgtgggacatat 9955921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 226
Target Start/End: Original strand, 22077855 - 22077961
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| |||||| |||||||| |||||||||||  ||| |||| ||| |||||||||||||| |||| ||||||||  ||||||||||  | |||||    
T  22077855 caaccgcataagtgaaagagacgccacactcttaccccaaacctta-ggctatgagtttatgggtcctcttacttataagatgttcaacctttatttttc 22077953  T
Q  219 tatccgat 226  Q
    ||||||||    
T  22077954 tatccgat 22077961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 39066226 - 39066337
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| || |||| |||||||| | ||||||||| | |||| |||||| |||||| |||||||||  ||| | |||||| |||||||||||  |||||||    
T  39066226 caaccacataagtaagagagacaccacactcttatccaaaaccttaagacaatgattttatgggtcatcttagttataaggtgttcaacctttacttttc 39066325  T
Q  219 tatccgatgtgg 230  Q
    ||||||||||||    
T  39066326 tatccgatgtgg 39066337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 235
Target Start/End: Original strand, 66128 - 66230
Alignment:
Q  134 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttc-aacctccacttttctatccgatgtggga 232  Q
    ||||| ||| ||||||||||| |||| |||||||| ||  |||||||||| |||| |||||||| |||||| |||||  |||||||||||||||||| ||    
T  66128 gagaggcgccacactcttacccaaaaccttaaggccataggtttatgggtcctcttacttataaggtgttcaaacctttacttttctatccgatgtgaga 66227  T
Q  233 cat 235  Q
    |||    
T  66228 cat 66230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 14318999 - 14318881
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||| | |||||||| | ||||||||||| |||| |||||||||||   |||||||||  ||| |||||||| |||||||||||  ||| ||     
T  14318999 caaccgcacaaataagagagacaccacactcttacccaaaaccttaaggcaatagatttatgggtcttcttacttataaggtgttcaacctttactattt 14318900  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||| |||| ||||||    
T  14318899 tatccgacgtggaacatat 14318881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 26661924 - 26662014
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||  ||||||||||  |||||||||||| |||||||||||    
T  26661924 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatcggtttatgggtcttctcacttataaggtgttcaacct 26662014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 126 - 236
Target Start/End: Complemental strand, 44092019 - 44091909
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    |||||||||| |||||| ||||||||||| | ||||||||   | |   |||||||||||||||||||||||||||||||||||  ||||||  ||| ||    
T  44092019 acaagtgagaaagacgccacactcttacccacaatcttaaaatattagatttatgggttctctcacttataaagtgttcaacctttacttttacatctga 44091920  T
Q  226 tgtgggacata 236  Q
    |||| ||||||    
T  44091919 tgtgtgacata 44091909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 128 - 237
Target Start/End: Original strand, 47379813 - 47379929
Alignment:
Q  128 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaa-------gtgttcaacctccacttttcta 220  Q
    ||||||||||||||| ||||||||| | ||||| |||||| |||||| || |||||| | | |||||| ||       ||||||||||||||||||||||    
T  47379813 aagtgagagagacgccacactcttatccaaaattttaaggtaatgagcttgtgggttatttaacttattaaatattaagtgttcaacctccacttttcta 47379912  T
Q  221 tccgatgtgggacatat 237  Q
    |||||||||||| ||||    
T  47379913 tccgatgtgggatatat 47379929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 5575223 - 5575118
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 231  Q
    ||||||||||| ||||||||| | |||| ||||| || |||  ||||| ||| |||| |||||||| |||||||||||  ||| |||||||||| |||||    
T  5575223 gagagagacgccacactcttatccaaaaccttaaagctatggatttataggtcctcttacttataaggtgttcaacctttactcttctatccgacgtggg 5575124  T
Q  232 acatat 237  Q
    ||||||    
T  5575123 acatat 5575118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 152 - 220
Target Start/End: Complemental strand, 12772971 - 12772903
Alignment:
Q  152 acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    |||||||| |||||| |||||| ||||||| ||||||||||||||||| |||||||||| | |||||||    
T  12772971 acctaaaaccttaagacaatgaatttatggattctctcacttataaagcgttcaacctcaagttttcta 12772903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 24132053 - 24132129
Alignment:
Q  161 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||||||||||||| | | || | |||||| |||||||||||  |||||||||||||||| |||||||||    
T  24132053 cttaaggcaatgagtttatggatccccttatttataaggtgttcaacctttacttttctatccgatgagggacatat 24132129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 37556243 - 37556125
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccact-ttt 217  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||| ||| |||||| ||| |||| ||||||||  ||||||||||  ||| |||    
T  37556243 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttat-ggtcctcttacttataagatgttcaacctttactattt 37556145  T
Q  218 ctatccgatgtgggacatat 237  Q
     |||||||||||||||||||    
T  37556144 ttatccgatgtgggacatat 37556125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 31767187 - 31767305
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  ||| |||||  ||||||||||| |||| ||||||||| |  ||| |||||| |||| |||||||| |||||||||||  ||| ||     
T  31767187 caaccacacaagcaagatagacgtcacactcttacccaaaaccttaaggcattaggttaatgggtcctcttacttataaggtgttcaacctttactgttt 31767286  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||| ||||||    
T  31767287 tatccgatgtggaacatat 31767305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 123 - 237
Target Start/End: Complemental strand, 40082534 - 40082421
Alignment:
Q  123 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 222  Q
    ||||||||  |||||||  | ||||||||||| |||| ||||||||||||| ||||| | | |||| |||||||| |||||||||||  ||| || ||||    
T  40082534 cgcacaagcaagagagataccacactcttacccaaaaccttaaggcaatgaatttat-gatcctcttacttataaggtgttcaacctttactattttatc 40082436  T
Q  223 cgatgtgggacatat 237  Q
    |||||| ||||||||    
T  40082435 cgatgtaggacatat 40082421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 41157507 - 41157389
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  ||| |||| | ||||||||||  |||| || ||||||||| |||||||||| |||| |||||||| ||||||||| |  ||| ||     
T  41157507 caaccacacaagcaagacagacaccacactcttactcaaaacctaaaggcaatgggtttatgggtcctcttacttataaggtgttcaacttttactcttt 41157408  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  41157407 tatctgatgtgggacatat 41157389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 207
Target Start/End: Original strand, 44043812 - 44043886
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaac 207  Q
    |||||||| | ||||||||||| ||||||||||| ||||| ||||||||||  ||| |||||||| |||||||||    
T  44043812 agagagacaccacactcttacccaaaatcttaagacaatgggtttatgggtcatcttacttataaggtgttcaac 44043886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 188
Target Start/End: Original strand, 32168724 - 32168793
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctct 188  Q
    ||||||||||||  |||||||||| ||||||||||| |||| || ||||||||| |||||||||| ||||    
T  32168724 caaccgcacaagcaagagagacgccacactcttacccaaaacctcaaggcaatgggtttatgggtcctct 32168793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 29798317 - 29798213
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||| | || | |||||||||||| ||||||| || |||| |||||||| |||||||||||  ||| || ||||| |||| |||    
T  29798317 agagagacaccacactcttatccaagaccttaaggcaatgggtttatgagtcctcttacttataaggtgttcaacctttactattttatccaatgtagga 29798218  T
Q  233 catat 237  Q
    |||||    
T  29798217 catat 29798213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 41759601 - 41759497
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| ||||||||||||  ||||||| |  ||| |||||||| ||||||||| |  ||| || ||||||||||| ||    
T  41759601 agagagacaccacactcttacccaaaaccttaaggcaatggatttatggatcatcttacttataaggtgttcaacttttactattttatccgatgtgtga 41759502  T
Q  233 catat 237  Q
    |||||    
T  41759501 catat 41759497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 44685546 - 44685470
Alignment:
Q  162 ttaaggcaatgagtttatgggttctctcacttataaagtgttc-aacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||||||||| ||| |||| |||||||| || ||| |||||  ||||||||||||||| ||||||||||    
T  44685546 ttaaggcaatgagtttattggtcctcttacttataaggttttcaaacctttacttttctatccgatatgggacatat 44685470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 50052063 - 50052167
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| ||||  |||||  |||  |||||||||| |||| ||||||||  ||||||||||  ||| || ||||||||||||||    
T  50052063 agagagacaccacactcttacccaaaactttaagaaaataggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtggga 50052162  T
Q  233 catat 237  Q
    |||||    
T  50052163 catat 50052167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 3537228 - 3537291
Alignment:
Q  174 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||| |||| |||||||| |||||||||||  ||| || |||||||||||||||||||    
T  3537228 gtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 3537291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 11977387 - 11977294
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| ||||||||| |  ||||||| || |||| |||||||| ||||||||| |  ||| || || ||||||||||||||||    
T  11977387 acactcttacccaaaaccttaaggcattaggtttatgagtgctcttacttataaggtgttcaacatttactgttttacccgatgtgggacatat 11977294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 224
Target Start/End: Complemental strand, 4956298 - 4956218
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 224  Q
    ||||| ||||||||||  |||  ||||||||||||||| | |||| ||||||||  ||||||||||  |||||||||||||    
T  4956298 acacttttacctaaaactttagagcaatgagtttatggatcctcttacttataagatgttcaacctttacttttctatccg 4956218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 5528794 - 5528898
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||||| ||||  ||||| |||| ||||||  |||||||||||| || |||| | ||||||  ||||||||||  ||| || ||||||||||| ||    
T  5528794 agagagacgccacacatttacccaaaaccttaagaaaatgagtttatgagtcctcttatttataagatgttcaacctttactcttttatccgatgtgaga 5528893  T
Q  233 catat 237  Q
    |||||    
T  5528894 catat 5528898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 30576615 - 30576707
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||||||||||||||  |||| | ||||| ||||  ||||| || |  || ||||||| |||||||| ||||||||||||||||| ||||||    
T  30576615 cacaagtgagagagacattacatttttacccaaaacattaagacattatgtctatgggtcctctcactcataaagtgttcaacctctactttt 30576707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 182 - 237
Target Start/End: Complemental strand, 4878872 - 4878817
Alignment:
Q  182 gttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||||||||| ||||||| || |||| || |||||||||||| ||||||    
T  4878872 gttctctcacttataaaatgttcaagcttcactattttatccgatgtggaacatat 4878817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 180
Target Start/End: Original strand, 47380191 - 47380254
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatg 180  Q
    |||||||  |||||||||||||| |  ||||||||||| ||||  |||||||||||||||||||    
T  47380191 agcaaccagacaagtgagagagatgtcacactcttacccaaaactttaaggcaatgagtttatg 47380254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 221
Target Start/End: Complemental strand, 50556528 - 50556481
Alignment:
Q  174 gtttatgggttctctcacttataaagtgttcaacctccacttttctat 221  Q
    ||||| || |||||||||||||||| |||||||||||| |||||||||    
T  50556528 gtttacggattctctcacttataaattgttcaacctccgcttttctat 50556481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 205
Target Start/End: Complemental strand, 48000129 - 48000099
Alignment:
Q  175 tttatgggttctctcacttataaagtgttca 205  Q
    |||||||||||||||||||||||||||||||    
T  48000129 tttatgggttctctcacttataaagtgttca 48000099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 5996891 - 5997015
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| ||||||| ||||| |||||||||| | ||||||| ||  |||| |||||  |||||  | ||||| | |||||| ||||||| ||||||| | ||    
T  5996891 gctagagcaaccacacaaatgagagagacaccacactctcactcaaaaccttaaa-caatggatatatggatcctctcatttataaaatgttcaagcacc 5996989  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||||||||| |  |||||||||||||    
T  5996990 acttttctaacttatgtgggacatat 5997015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 176 - 237
Target Start/End: Complemental strand, 45084457 - 45084396
Alignment:
Q  176 ttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||| |||| |||||||| |||||||||||  ||| || |||||||||||||| ||||    
T  45084457 ttatgggtcctcttacttataaggtgttcaacctttactgttttatccgatgtgggagatat 45084396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 3e-35; HSPs: 63)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 117 - 236
Target Start/End: Original strand, 47964542 - 47964661
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| |||||||||||||||||| ||||||||||| |||| |||||||||||  |||||||||| |||||||||||| || ||||||||||||| ||    
T  47964542 agcaaccacacaagtgagagagacgccacactcttacccaaaaccttaaggcaataggtttatgggtcctctcacttatatagcgttcaacctccacatt 47964641  T
Q  217 tctatccgatgtgggacata 236  Q
    ||||||||||| ||||||||    
T  47964642 tctatccgatgcgggacata 47964661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 12114588 - 12114706
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||| |||||||| | ||||||||||| |||| |||||| ||||| |||||||||| |||| |||||||| |||||||||||  |||||||    
T  12114588 caaccgcacaagtaagagagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttacttttc 12114687  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||| ||||    
T  12114688 tatccgatgtgggatatat 12114706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 43346817 - 43346935
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||||||||||||||||||| |||||||| |||||||||||  ||| ||     
T  43346817 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtgttcaacctttactattt 43346916  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  43346917 tatctgatgtgggacatat 43346935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 47964950 - 47965050
Alignment:
Q  128 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 227  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||| | ||||| |  |||||||||||| | |||| |||||||||||||||||||||||    
T  47964950 aagtgagagagacgccacactcttacccaaaatcttaaggcaatgggcttatgagccctctcacttatataatgtttaacctccacttttctatccgatg 47965049  T
Q  228 t 228  Q
    |    
T  47965050 t 47965050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 39336270 - 39336373
Alignment:
Q  134 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    |||||| || ||||| ||| | |||| ||||| ||||||||||||||| | ||||||||||||||||||||||||||||  |||||||||||||||||||    
T  39336270 gagagaggcaacactattatccaaaaccttaaagcaatgagtttatggatcctctcacttataaagtgttcaacctccaactttctatccgatgtgggac 39336369  T
Q  234 atat 237  Q
    ||||    
T  39336370 atat 39336373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 22304701 - 22304583
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| || ||||||||  ||| ||     
T  22304701 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtattcaacctttactattt 22304602  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  22304601 tatccgatgtgggacatat 22304583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 29644607 - 29644725
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| |||  |||||||||| ||||||||||| |||| |||||| ||||| ||||||||||||||| |||||||| |||||||||||  ||| ||     
T  29644607 caaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggttctcttacttataaggtgttcaacctttactcttt 29644706  T
Q  219 tatccgatgtgggacatat 237  Q
     ||||||||||||||||||    
T  29644707 aatccgatgtgggacatat 29644725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 234
Target Start/End: Complemental strand, 25317292 - 25317175
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| ||||||||||||| || ||||||| ||||| |||| ||||||||||  ||||||||||| |||||| ||| |||||| ||||||||||||||    
T  25317292 agcaaccacacaagtgagagacacactacacttttacccaaaaccttaaggcaacaagtttatgggtcctctcagttacaaagtgctcaacctccacttt 25317193  T
Q  217 tctatccgatgtgggaca 234  Q
    || ||| | |||||||||    
T  25317192 tccatctggtgtgggaca 25317175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 29644928 - 29645046
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| |||  |||||||||| ||||||||||| |||| |||||| ||||| |||||||||| |||| |||||||| ||||| |||||  ||| ||     
T  29644928 caaccgcataagcaagagagacgccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgtttaacctttactcttt 29645027  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  29645028 tatccgatgtgggacatat 29645046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 21832385 - 21832487
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    ||||||||||  |||||||||| |||| |||||||| ||||||||||| || |||| |||||||| |||||||||||  |||||||||||| ||||||||    
T  21832385 agagagacgc--cactcttacccaaaaccttaaggctatgagtttatgagtcctcttacttataaggtgttcaacctttacttttctatccaatgtggga 21832482  T
Q  233 catat 237  Q
    |||||    
T  21832483 catat 21832487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 232
Target Start/End: Original strand, 41359791 - 41359904
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||| ||||||||||| ||| ||||||| |||| |||||||||||| |||||||||| |||| |||||||| || ||||||||  ||| ||     
T  41359791 caaccacacaagcgagagagacgccacattcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactattg 41359890  T
Q  219 tatccgatgtggga 232  Q
    ||||||||||||||    
T  41359891 tatccgatgtggga 41359904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 46546376 - 46546469
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||  |||| |||||||||||| |||||||| |||||| |||||||||||||||||||||||| |||| |||| |||| ||||||||    
T  46546376 acactcttacacaaaaccttaaggcaatgggtttatggattctctaacttataaagtgttcaacctccacatttcaatccaatgtaggacatat 46546469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 33803278 - 33803396
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||| ||| ||||||| ||||||||||| || | ||||| |||||| |||||||||| |||| |||||||  |||||||||||  ||| ||     
T  33803278 caaccacacaagagagggagacgccacactcttacccaataccttaatgcaatgggtttatgggtcctcttacttatatggtgttcaacctttactattt 33803377  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  33803378 tatccgatgtgggacatat 33803396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 52634807 - 52634690
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||| |||||||  |||||||||  ||||||||||| |||| |||||||||||| ||||||||| ||||| |||||||| | |||||||||  ||| ||     
T  52634807 caactgcacaagcaagagagacgtcacactcttacccaaaaccttaaggcaatgggtttatggg-tctcttacttataaggcgttcaacctttactgttt 52634709  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  52634708 tatccgatgtgggacatat 52634690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 124 - 237
Target Start/End: Complemental strand, 35946649 - 35946536
Alignment:
Q  124 gcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatcc 223  Q
    |||||||  |||||||| | ||||| ||||| |||| |||||||||| | |||||||||| |||| |||||||| |||||||||||  ||| || |||||    
T  35946649 gcacaagcaagagagacaccacacttttacccaaaaccttaaggcaacgggtttatgggtcctcttacttataaggtgttcaacctttactgttttatcc 35946550  T
Q  224 gatgtgggacatat 237  Q
    ||||||||||||||    
T  35946549 gatgtgggacatat 35946536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 125 - 237
Target Start/End: Original strand, 33175691 - 33175808
Alignment:
Q  125 cacaagtgagagagacgctacac--tcttacctaaaatcttaaggcaatgagtttat---gggttctctcacttataaagtgttcaacctccacttttct 219  Q
    |||||||||||||||||  ||||  ||||||| |||| |||||||| ||||||||||   ||||||||| |||||||| |||||||||||  ||||||||    
T  33175691 cacaagtgagagagacgtcacacactcttacccaaaaccttaaggctatgagtttattatgggttctcttacttataaggtgttcaacctttacttttct 33175790  T
Q  220 atccgatgtgggacatat 237  Q
    ||| |||||| |||||||    
T  33175791 atctgatgtgagacatat 33175808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 37990679 - 37990783
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||| || |||| |||||||| ||||||||| |  ||| || |||||||||||| |    
T  37990679 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacatttactattttatccgatgtggaa 37990778  T
Q  233 catat 237  Q
    |||||    
T  37990779 catat 37990783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 130 - 237
Target Start/End: Original strand, 53118012 - 53118118
Alignment:
Q  130 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 229  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| |||| ||  | ||||||||||||| |||||||||||  ||| || |||||||| ||    
T  53118012 gtgagagagacactacactcttacccaaaatcttaaggcaatgggttt-tgaatcctctcacttataaggtgttcaacctttactcttttatccgatatg 53118110  T
Q  230 ggacatat 237  Q
    | ||||||    
T  53118111 gaacatat 53118118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 3135099 - 3135217
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||  |||| |||| |||| || ||||||||||||| | |||||||| ||||||||| |  ||| ||     
T  3135099 caaccgcacaagcaagagagacaccacactcttactcaaaaccttatggcagtgggtttatgggttcttttacttataaggtgttcaacatttactattt 3135198  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  3135199 tatccgatgtgggacatat 3135217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 15772986 - 15772868
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||| | |||| ||||| ||||||||||||||||| |||| |||||||| ||||||||| |  ||| ||     
T  15772986 caaccacacaagcaagagagacaccacactcttatccaaaaccttaaagcaatgagtttatgggtcctcttacttataaggtgttcaacatttactcttt 15772887  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||| ||||||||||    
T  15772886 tatccgatatgggacatat 15772868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 39914384 - 39914266
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| ||||||||||||| | ||||||||| | ||||| |||||||| |  |||||||||| |||| | |||||| |||||||||||| ||| ||     
T  39914384 caaccgcataagtgagagagacaccacactcttatccaaaatattaaggcattaggtttatgggtcctcttatttataaggtgttcaacctctactgttt 39914285  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| |||||| |||||||    
T  39914284 tatctgatgtgagacatat 39914266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 42342116 - 42342194
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 197  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||||||||||||||||| || |||| ||||||||    
T  42342116 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataa 42342194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 42342414 - 42342532
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||||  ||||||||||| |||| |||||| |||||  ||||||||| |||| |||||||| ||||| |||||  ||| ||     
T  42342414 caaccgcacaagcaagagagacgtcacactcttacccaaaaccttaagacaatggatttatgggtcctcttacttataaggtgttgaacctttactcttt 42342513  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  42342514 tatcggatgtgggacatat 42342532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 45395672 - 45395797
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| ||||||| |||||||||||||||| | ||||||||||| ||||  ||||| ||||| |||||||| | |||| |||||||| ||||| |||||      
T  45395672 gctagagcaaccccacaagtgagagagacaccacactcttacccaaaacattaagacaatgggtttatggatcctcttacttataacgtgtttaaccttt 45395771  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||| || ||| |||||||||| ||||    
T  45395772 actcttttattcgatgtgggatatat 45395797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 121 - 237
Target Start/End: Original strand, 25739453 - 25739569
Alignment:
Q  121 accgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    ||||||||||  |||||||||  ||||||||||| |||| || || ||||||||||||||||| |||| |||||||   |||||||| |  ||| || ||    
T  25739453 accgcacaagctagagagacgtcacactcttacccaaaacctaaaagcaatgagtttatgggtcctcttacttatatgatgttcaacttttactatttta 25739552  T
Q  221 tccgatgtgggacatat 237  Q
    |||||||||||||||||    
T  25739553 tccgatgtgggacatat 25739569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 37991017 - 37991121
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| |||||||| |||||||||| ||| |||| |||||||| |||||||||||  ||| || ||||| ||||| ||    
T  37991017 agagagacaccacactcttacccaaaaccttaaggcgatgagtttataggtcctcttacttataaggtgttcaacctttactattttatccaatgtgaga 37991116  T
Q  233 catat 237  Q
    |||||    
T  37991117 catat 37991121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 8328025 - 8327918
Alignment:
Q  130 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 229  Q
    ||||||||||| | ||||||||||| |||| ||||||||| |  ||||||||||||||| ||||||||  | |||| |||  ||| || |||||||||||    
T  8328025 gtgagagagacaccacactcttacccaaaaccttaaggcattacgtttatgggttctcttacttataagatattcatcctttactcttttatccgatgtg 8327926  T
Q  230 ggacatat 237  Q
    ||||||||    
T  8327925 ggacatat 8327918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 32462926 - 32463045
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacc-tccactttt 217  Q
    ||||||||||||  |||||||| | ||||||||||  |||| |||||||||||| ||||||| ||  ||| |||||||| || ||||||| |  ||| ||    
T  32462926 caaccgcacaagcaagagagacaccacactcttactcaaaaccttaaggcaatgggtttatgagtcttcttacttataaggtattcaaccttttactctt 32463025  T
Q  218 ctatccgatgtgggacatat 237  Q
    ||||||||||||||||||||    
T  32463026 ctatccgatgtgggacatat 32463045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Original strand, 39336002 - 39336088
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||||| ||||||||| | ||||||||||| |||| ||||||||||||| |||||| ||  | ||| ||||||||||||||||||||    
T  39336002 cacaagcgagagagacaccacactcttacccaaaaccttaaggcaatgattttatgagtcttatcatttataaagtgttcaacctcc 39336088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 54017842 - 54017960
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||| |||||||| | ||||||||||| |||| ||||||||  |  ||||||| || |||| |||||||| |||||||||||  ||| ||     
T  54017842 caaccacacaagtaagagagacaccacactcttacccaaaaccttaaggcgttaggtttatgagtcctcttacttataaggtgttcaacctttactcttt 54017941  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||| ||||||||    
T  54017942 tatccgatgtaggacatat 54017960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 129 - 237
Target Start/End: Original strand, 1634350 - 1634459
Alignment:
Q  129 agtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacc-tccacttttctatccgatg 227  Q
    |||||||||||  |  |||||||||| |||| |||||| ||||| |||||||||| |||| |||||||| ||||| |||| |  | ||||||||||||||    
T  1634350 agtgagagagataccgcactcttacccaaaaccttaagccaatgggtttatgggtcctcttacttataatgtgtttaaccttttatttttctatccgatg 1634449  T
Q  228 tgggacatat 237  Q
    ||||||||||    
T  1634450 tgggacatat 1634459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 229
Target Start/End: Complemental strand, 4823762 - 4823677
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 229  Q
    ||||||||||| |||||||||||||||||||||||||||| |||  |||||||| ||||| ||| |  ||| || |||||||||||    
T  4823762 acactcttacccaaaatcttaaggcaatgagtttatgggtcctcctacttataaggtgtttaacttttactattttatccgatgtg 4823677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 161 - 237
Target Start/End: Original strand, 7767382 - 7767458
Alignment:
Q  161 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||| ||||| ||||||| || |||| | ||||||||||| ||||||  ||||||||||||||||||||||||||    
T  7767382 cttaagacaatgggtttatgagtcctcttagttataaagtgtccaacctttacttttctatccgatgtgggacatat 7767458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 144 - 196
Target Start/End: Original strand, 16871010 - 16871062
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    |||||||||||||||| ||||||||||||||||||||||||| ||| ||||||    
T  16871010 acactcttacctaaaaccttaaggcaatgagtttatgggttccctctcttata 16871062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 209
Target Start/End: Complemental strand, 32589809 - 32589745
Alignment:
Q  145 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    |||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||    
T  32589809 cactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacct 32589745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 36986037 - 36986092
Alignment:
Q  182 gttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||    
T  36986037 gttctctcacttataaagttctcaaccttcacttttctattcgatgtgggacatat 36986092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 237
Target Start/End: Original strand, 37011476 - 37011531
Alignment:
Q  182 gttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||||||||||  ||||||| ||||||||||| |||||||||||||||    
T  37011476 gttctctcacttataaagttctcaaccttcacttttctattcgatgtgggacatat 37011531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 237
Target Start/End: Complemental strand, 39389186 - 39389084
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 234  Q
    |||||| | ||||||||||| |||| |||||| ||||| |||||||||| |||| | || ||| |||||||||||  ||| || |||||||||| |||||    
T  39389186 agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttagttttaaggtgttcaacctttactattttatccgatgtaggaca 39389087  T
Q  235 tat 237  Q
    |||    
T  39389086 tat 39389084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 39934981 - 39935099
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  ||||||||   ||||||||||  ||||  ||||||||||| |||||||| | |||| |||||||| |||||||||||  ||| ||     
T  39934981 caaccacacaagcaagagagacatcacactcttactcaaaactttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactcttt 39935080  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||| ||||||||    
T  39935081 tatccgatgtaggacatat 39935099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 42584864 - 42584966
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 234  Q
    |||||| | |||||||| |  ||||||||||| ||||  |||||||| | |||| |||||||| |||||||| ||  ||| |||||||||||||||||||    
T  42584864 agagacaccacactctttctcaaaatcttaagacaattggtttatggatcctcttacttataaggtgttcaatctttactcttctatccgatgtgggaca 42584963  T
Q  235 tat 237  Q
    |||    
T  42584964 tat 42584966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 237
Target Start/End: Complemental strand, 45901837 - 45901727
Alignment:
Q  128 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactt-ttctatccgat 226  Q
    |||| |||||||| | ||||||||||| ||||  ||||||| ||||||||||| || |||| |||||||| |||||||||||    || || ||||||||    
T  45901837 aagtaagagagacaccacactcttaccaaaaactttaaggccatgagtttatgcgtcctcttacttataaggtgttcaacctttttttcttttatccgat 45901738  T
Q  227 gtgggacatat 237  Q
    |||||||||||    
T  45901737 gtgggacatat 45901727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 133 - 235
Target Start/End: Original strand, 49336727 - 49336829
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| | ||  ||||| | ||| |||||||||| |||| |||||||| ||| |||||||  |||||||||||||||||| ||    
T  49336727 agagagacaccacactcttacccagaactttaagactatgggtttatgggtcctcttacttataaggtggtcaacctttacttttctatccgatgtgaga 49336826  T
Q  233 cat 235  Q
    |||    
T  49336827 cat 49336829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 237
Target Start/End: Complemental strand, 9240280 - 9240163
Alignment:
Q  120 aaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 219  Q
    |||||||| | |||||||||| | ||| ||||| |  ||||||||||| ||||  ||||||||| |||| |||||||| ||||||| | |  |||| |||    
T  9240280 aaccgcactattgagagagacaccacattcttatccgaaatcttaaggtaatggatttatgggtcctcttacttataaggtgttcagcttttacttctct 9240181  T
Q  220 atccgatgtgggacatat 237  Q
    ||||||||||| ||||||    
T  9240180 atccgatgtggaacatat 9240163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 213
Target Start/End: Complemental strand, 12749276 - 12749207
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccac 213  Q
    ||||||||| | |||| ||||| |||||  |||||||||| ||| |||||||||||||||||||||||||    
T  12749276 acactcttatcaaaaaccttaatgcaattggtttatgggtcctcacacttataaagtgttcaacctccac 12749207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 197
Target Start/End: Complemental strand, 52635047 - 52634994
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 197  Q
    ||||||||||| |||||||||||||||||||||||||||| |||| | ||||||    
T  52635047 acactcttacccaaaatcttaaggcaatgagtttatgggtcctcttatttataa 52634994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 156 - 220
Target Start/End: Complemental strand, 2417412 - 2417348
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    |||| ||||| ||| ||||||||| | |||||||||||||||| ||||||| |||||||||||||    
T  2417412 aaaaccttaaagcattgagtttatagattctctcacttataaaatgttcaatctccacttttcta 2417348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 131 - 183
Target Start/End: Complemental strand, 53596595 - 53596543
Alignment:
Q  131 tgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggt 183  Q
    |||||||||| | ||||||||||||||||||||||| ||||| ||||||||||    
T  53596595 tgagagagacaccacactcttacctaaaatcttaagtcaatgggtttatgggt 53596543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 123 - 193
Target Start/End: Original strand, 22303689 - 22303759
Alignment:
Q  123 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcactt 193  Q
    ||||||||| ||||| || | ||||||||||| |||| |||||||||||| |||||||||| |||| ||||    
T  22303689 cgcacaagtaagagaaacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttactt 22303759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 132 - 209
Target Start/End: Original strand, 33362334 - 33362409
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||||||||| |||||  |||| |||||||||||| |||| |||||||||| |||| |||||||| || ||||||||    
T  33362334 gagagagacgccacact--tacccaaaatcttaaggaaatgggtttatgggtcctcttacttataaggtattcaacct 33362409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 3384317 - 3384410
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| ||||  |||||||| | ||||||||||| ||||  ||||||||||||| |||||  ||| || ||||  |||||||||||||    
T  3384317 acactcttacccaaaactttaaggcattaagtttatgggtcctcttccttataaagtgtttaacctatactgttttatcatatgtgggacatat 3384410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 15773299 - 15773206
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| ||||  ||||||||||||| ||||| || |||| ||||||||  |||||||| |  ||| || ||| |||||||||||||||    
T  15773299 acactcttacccaaaactttaaggcaatgagcttatgagtcctcttacttataagatgttcaacttttactcttttattcgatgtgggacatat 15773206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 54451239 - 54451320
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||| |||||| |||| ||| ||||| |  ||||||| ||||||||||||||||||| |||||| |  ||||||||||||||    
T  54451239 aaaaccttaagacaataagtatatggatcatctcactcataaagtgttcaacctccatttttctttttgatgtgggacatat 54451320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 237
Target Start/End: Complemental strand, 31190091 - 31190031
Alignment:
Q  177 tatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||| |||| |||||||| |||||||||||  ||| || |||||||||||||||||||    
T  31190091 tatgggtcctctaacttataaggtgttcaacctttactcttttatccgatgtgggacatat 31190031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 182
Target Start/End: Original strand, 3135480 - 3135543
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatggg 182  Q
    ||||||||||||  | |||||| | ||||||||| |||||| |||||||||||| |||||||||    
T  3135480 caaccgcacaagcaaaagagacaccacactcttatctaaaaccttaaggcaatgggtttatggg 3135543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 17735043 - 17735094
Alignment:
Q  145 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    |||||||||| |||| |||||| |||||||||||||||||| ||| ||||||    
T  17735043 cactcttacccaaaaccttaagtcaatgagtttatgggttccctctcttata 17735094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 145 - 196
Target Start/End: Original strand, 19036312 - 19036363
Alignment:
Q  145 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    |||||||||| |||| |||||| |||||||||||||||||| ||| ||||||    
T  19036312 cactcttacccaaaaccttaagtcaatgagtttatgggttccctctcttata 19036363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 155 - 218
Target Start/End: Complemental strand, 33153652 - 33153589
Alignment:
Q  155 taaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||| ||||| |||||||||| ||  || |||  ||||||||||||||||||||||||||||    
T  33153652 taaaattttaagacaatgagtttttgaattatcttgcttataaagtgttcaacctccacttttc 33153589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 54018239 - 54018342
Alignment:
Q  134 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    ||||||| | ||||||||||| |||| ||||||||  |  |||||||||| |||| |||||||| |||||||| ||  ||| || |||||||||  ||||    
T  54018239 gagagacaccacactcttacccaaaaccttaaggcgttaggtttatgggtcctcttacttataaggtgttcaatctttactcttttatccgatgcaggac 54018338  T
Q  234 atat 237  Q
    ||||    
T  54018339 atat 54018342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 209
Target Start/End: Original strand, 44160579 - 44160660
Alignment:
Q  127 caagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||| |||||||||| ||| ||||||| |||| |||||| ||||| |||||||| | |||| | |||||| |||||||||||    
T  44160579 caagtaagagagacgccacattcttacc-aaaaccttaagacaatgggtttatggatcctcttatttataaggtgttcaacct 44160660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 144 - 181
Target Start/End: Original strand, 16868434 - 16868471
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgg 181  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  16868434 acactcttatccaaaatcttaaggcaatgagtttatgg 16868471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 33809071 - 33809152
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||| |||||| ||| ||||||||  ||| ||| ||| |||||||||||||  | || ||||||||| ||||||||||||||    
T  33809071 aaaaccttaagacaacgagtttattagttttcttactcataaagtgttcaatatgcaattttctatctgatgtgggacatat 33809152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 135 - 196
Target Start/End: Original strand, 54017590 - 54017651
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    |||||| | ||||||||||| |||| |||||||||||| |||||||| ||| ||| ||||||    
T  54017590 agagacaccacactcttacccaaaaccttaaggcaatgggtttatggattccctctcttata 54017651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 133 - 197
Target Start/End: Original strand, 22303995 - 22304059
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataa 197  Q
    |||||||| | ||||||||| | |||| |||||||||||| |||||||||| | || ||||||||    
T  22303995 agagagacaccacactcttatccaaaaccttaaggcaatgggtttatgggtccgcttacttataa 22304059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 7e-33; HSPs: 64)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 4154707 - 4154810
Alignment:
Q  134 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    ||||||||| ||||||||||| |||| |||  |||||||||||||||||| || ||||||||||||||||||||||||||||||||||| ||||||||||    
T  4154707 gagagacgccacactcttacccaaaaccttggggcaatgagtttatgggtcctttcacttataaagtgttcaacctccacttttctatcagatgtgggac 4154806  T
Q  234 atat 237  Q
    ||||    
T  4154807 atat 4154810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 4154305 - 4154424
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    |||||||  |||| ||||||||||   |||| |||||| ||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  4154305 agcaaccaaacaattgagagagacatcacacacttacccaaaatattaaggcaatgagtttatgggt-ctctcacttataaagtgttcaacctccacttt 4154403  T
Q  217 tctatccgatgtgggacatat 237  Q
    |||||| ||||| ||||||||    
T  4154404 tctatctgatgtaggacatat 4154424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 9620702 - 9620820
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| ||||||||||||||||   | |||||||  ||||||||||||||||||||||||||||| ||||||||||||||||| ||||| || |||||    
T  9620702 agcaaccacacaagtgagagagacatcaaactctta--taaaatcttaaggcaatgagtttatgggtcctctcacttataaagtgatcaacttctacttt 9620799  T
Q  217 tctatccgatgtgggacatat 237  Q
    |||||| | |||| |||||||    
T  9620800 tctatctgttgtgagacatat 9620820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 3038316 - 3038434
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  ||||||| || ||||||||||| |||| |||||||||||| |||||||||| || | ||||||||||||||||||||  ||| ||     
T  3038316 caaccacacaagcaagagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtccttttacttataaagtgttcaacctttactattt 3038415  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  3038416 tatccgatgtgggacatat 3038434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 3669819 - 3669701
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||||||||||| || |||| |||||||| |||||||||||  ||| ||     
T  3669819 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcctcttacttataaggtgttcaacctttactattt 3669720  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  3669719 tatctgatgtgggacatat 3669701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 45121952 - 45122054
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 234  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||||| || |||| ||||||||||||||||||||  ||| || ||| ||||||||||||    
T  45121952 agagacgccacactgttacccaaaatcttaaggcaatgagtttatgagtcctcttacttataaagtgttcaacctttactattttatgcgatgtgggaca 45122051  T
Q  235 tat 237  Q
    |||    
T  45122052 tat 45122054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 45122083 - 45122201
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||| |||||||| | ||||||||||| |||| ||||||  |||||||||||||||||||| |||||||| |||||||||||  ||| ||     
T  45122083 caaccccacaagtaagagagacaccacactcttacccaaaaccttaagaaaatgagtttatgggttctcttacttataaggtgttcaacctttactattt 45122182  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||||||| |||||||    
T  45122183 tatccgatgtgagacatat 45122201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 5420783 - 5420665
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||||||| ||||||  ||||||||||  |||| |||||||||||| ||||||| || |||| ||||||||  ||||||||||  ||| |||    
T  5420783 caaccacacaagtgagggagacgtcacactcttacaaaaaaccttaaggcaatgggtttatgagtcctcttacttataagatgttcaacctttactattc 5420684  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  5420683 tatccgatgtgggacatat 5420665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 237
Target Start/End: Complemental strand, 147594 - 147465
Alignment:
Q  108 caatgctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaac 207  Q
    |||||||| | | ||||||||||  |||||||||| ||||||||||| ||||  ||||||||||  |||||||||| |||| | |||||| |||||||||    
T  147594 caatgctagaactaccgcacaagcaagagagacgccacactcttacccaaaactttaaggcaataggtttatgggtcctcttatttataaggtgttcaac 147495  T
Q  208 ctccacttttctatccgatgtgggacatat 237  Q
    ||  ||| || |||||||||||||||||||    
T  147494 ctttactcttttatccgatgtgggacatat 147465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 33113407 - 33113511
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||||||||||||||||||||||||||| |||| ||||||||   |||||||||  ||| || |||||||||| |||    
T  33113407 agagagacaccacactcttacccaaaatcttaaggcaatgagtttatgggtcctcttacttataagacgttcaacctttactattttatccgatgtagga 33113506  T
Q  233 catat 237  Q
    |||||    
T  33113507 catat 33113511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 45122756 - 45122638
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||||| |||||| |||| |||| |||||| |||||||||||||||| |||| |||||||| |||||||||||  ||| ||     
T  45122756 caaccacacaagcaagagagacgccacactcatacccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacctttactattt 45122657  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||||| ||| |||||    
T  45122656 tatccgatgcgggccatat 45122638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 112 - 209
Target Start/End: Original strand, 18372013 - 18372110
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    |||| |||||||||||||| |||||| || | ||||||||||| |||| ||||| ||||||||||||||| | |||| |||||||| |||||||||||    
T  18372013 gctagagcaaccgcacaagcgagagaaacaccacactcttacccaaaaccttaaagcaatgagtttatggatcctcttacttataaggtgttcaacct 18372110  T

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Target: chr8; HSP #13
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 34835316 - 34835223
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| ||||  |||||||||||||||||||||| |||| |||||||| |||||||||||  ||| || |||| ||||||||||||||    
T  34835316 acactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatcggatgtgggacatat 34835223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 9608863 - 9608759
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||||| |||||| |||| |||| |||||||  ||| ||||||||||  ||| |||||||| |||||||||||  ||||||||||||||| |||||    
T  9608863 agagagacgccacactcatacccaaaaccttaaggtgatgggtttatgggtcatcttacttataaggtgttcaacctttacttttctatccgatatggga 9608764  T
Q  233 catat 237  Q
    |||||    
T  9608763 catat 9608759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 166 - 237
Target Start/End: Complemental strand, 41972243 - 41972172
Alignment:
Q  166 ggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||| |||||||||| || |||||||||| |||||||||||  ||||||||||||||||||||||||||    
T  41972243 ggcaatgggtttatgggtcctatcacttataaggtgttcaacctttacttttctatccgatgtgggacatat 41972172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 70300 - 70418
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  ||| |||||  |||||||||||||||| ||||||||| || |||||||||| |||| ||||||||  |||||||| |  ||| ||     
T  70300 caaccacacaagcaagatagacgtcacactcttacctaaaaccttaaggcagtgggtttatgggtcctcttacttataagatgttcaacatttactcttt 70399  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  70400 tatccgatgtgggacatat 70418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 3670192 - 3670074
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||| |||  |||||||||| |||  |||||||| ||||| |||||  ||| ||     
T  3670192 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggaaataggtttatgggtcctcatacttataaggtgttaaacctttactattt 3670093  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  3670092 tatccgatgtgggacatat 3670074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 131 - 237
Target Start/End: Complemental strand, 9309475 - 9309369
Alignment:
Q  131 tgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgg 230  Q
    |||||||||| | |||||||||||  | | |||||||||||||||||| |||| |||| |||||||| ||||||||| |  ||| || ||||||||||||    
T  9309475 tgagagagacaccacactcttacccgacaccttaaggcaatgagtttaagggtcctcttacttataaggtgttcaacatttactcttttatccgatgtgg 9309376  T
Q  231 gacatat 237  Q
    |||||||    
T  9309375 gacatat 9309369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 25561834 - 25561960
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacct-aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctc 210  Q
    |||| ||||||| ||||||  ||||||| |  |||||||||||  |||| |||||| |||||||||||||||| |||| |||||||| ||||||||| |     
T  25561834 gctagagcaaccacacaagcaagagagatgtcacactcttaccccaaaaccttaagacaatgagtttatgggtcctcttacttataaggtgttcaacgtt 25561933  T
Q  211 cacttttctatccgatgtgggacatat 237  Q
     ||| || |||||||||||||||||||    
T  25561934 tactcttttatccgatgtgggacatat 25561960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 34835008 - 34834890
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||||||||||||||| ||  ||| |||||||| ||||| |||||  ||| ||     
T  34835008 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgagtcatcttacttataaggtgtttaacctttactattt 34834909  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||| |||||||||||||    
T  34834908 tatccaatgtgggacatat 34834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 40518714 - 40518596
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||| ||||  ||||||||||| |||| |||||| || || |||||||||| |||| | |||||| |||||||||||  |||||||    
T  40518714 caaccacacaagcaagagtgacgtcacactcttacccaaaaccttaagtcattgggtttatgggtcctcttatttataaggtgttcaacctttacttttc 40518615  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  40518614 tatctgatgtgggacatat 40518596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 8918815 - 8918906
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacat 235  Q
    ||||||||||| |||| |||||| ||||  |||||||||| |||| ||||||||||||||||||||  ||| | ||||| ||||||||||||    
T  8918815 acactcttacccaaaaccttaagtcaataggtttatgggtcctcttacttataaagtgttcaacctttactctgctatctgatgtgggacat 8918906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 9482630 - 9482748
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||  | |||||||||   |||||||| |||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  9482630 caaccgcacaagcaagagagataccacactcttatacaaaatctttaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttt 9482729  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||| |||||| ||||||    
T  9482730 tatcccatgtggaacatat 9482748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 20870599 - 20870717
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||| | |||||||||||||| || |||||||||| |||| ||||||||  ||||||||||  ||| ||     
T  20870599 caaccacacaagcaagagagacaccacactcttatccaaaatcttaaggcagtgggtttatgggtcctcttacttataagatgttcaacctttactattt 20870698  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||| ||||||    
T  20870699 tatctgatgtggaacatat 20870717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 30359741 - 30359623
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| |||| |||||||| | ||||||||||| ||||||||||||  ||| ||||||| || |||| |||||||| ||||||||| |  ||| ||     
T  30359741 caaccgcataagtaagagagacaccacactcttacccaaaatcttaaggttatgggtttatgagtcctcttacttataaggtgttcaacttttactcttt 30359642  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| |||||| |||||||    
T  30359641 tatctgatgtgagacatat 30359623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 135 - 209
Target Start/End: Original strand, 40579548 - 40579622
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    |||||| | |||||||||||||||| ||||| ||||| ||||||||||| |||| |||||||| |||||||||||    
T  40579548 agagacaccacactcttacctaaaaccttaaagcaataagtttatgggtcctcttacttataaggtgttcaacct 40579622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 188
Target Start/End: Complemental strand, 5915999 - 5915930
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctct 188  Q
    ||||||||||||  |||||||| | ||||||||||| |||| ||||||||||||||||||||||| ||||    
T  5915999 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcctct 5915930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 30441217 - 30441095
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaa----gtgttcaacctccact 214  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||||||  |||| ||||||||     |||||||||||  |||    
T  30441217 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggccctcttacttataattaaggtgttcaacctttact 30441118  T
Q  215 tttctatccgatgtgggacatat 237  Q
     || || ||||||||||||||||    
T  30441117 attttagccgatgtgggacatat 30441095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 168 - 229
Target Start/End: Original strand, 34219208 - 34219269
Alignment:
Q  168 caatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 229  Q
    |||| ||||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||    
T  34219208 caataagtttatggatcctctctcttataaagtgttcaacctccacttttctaaccgatgtg 34219269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 233
Target Start/End: Complemental strand, 40991848 - 40991771
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    |||| ||| ||||| || |||||||||| ||||||||||| ||||||||||||||||||||||||  | |||||||||    
T  40991848 aaaaccttgaggcattgggtttatgggtcctctcacttatgaagtgttcaacctccacttttctaagcaatgtgggac 40991771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 30359389 - 30359285
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| |||||||| ||| |||||||||| ||||  ||||||| ||||||||| |  ||| || ||||||||||| ||    
T  30359389 agagagacaccacactcttacccaaaaccttaaggctatgggtttatgggtcctcttgcttataaggtgttcaacatttactcttttatccgatgtgaga 30359290  T
Q  233 catat 237  Q
    |||||    
T  30359289 catat 30359285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 135 - 226
Target Start/End: Original strand, 9483229 - 9483320
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgat 226  Q
    |||||| | ||||||||||| |||| |||||| ||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||    
T  9483229 agagacaccacactcttacccaaaaccttaagacaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgat 9483320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 133 - 228
Target Start/End: Complemental strand, 9609203 - 9609108
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgt 228  Q
    |||||||||| ||||||||||| ||||  ||||||| ||| ||||||||||  ||| ||||||||  ||||||||||  ||||||||||| |||||    
T  9609203 agagagacgccacactcttaccgaaaacattaaggcgatgggtttatgggtcatcttacttataagatgttcaacctttacttttctatctgatgt 9609108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 2467639 - 2467516
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| |||||||  ||||||||||||||||  ||||| ||||| ||||  ||||| ||| ||||||||| | ||||||||  ||| |||||||||| ||     
T  2467639 gctaaagcaaccatacaagtgagagagacgtcacacttttaccaaaaactttaagacaacgagtttatgtgctctctcac--atatagtgttcaacttct 2467542  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    | |||||||||||| ||| |||||||    
T  2467541 aattttctatccgacgtgagacatat 2467516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 144 - 210
Target Start/End: Complemental strand, 5274882 - 5274816
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctc 210  Q
    ||||||||||  |||||||||||||||||| |||||||||  || || |||||||||||||||||||    
T  5274882 acactcttactcaaaatcttaaggcaatgattttatgggtcttcccatttataaagtgttcaacctc 5274816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 229
Target Start/End: Original strand, 37544516 - 37544626
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||| ||| |||| | ||||||||||| |||| ||||| | ||||  ||||||||| ||||  ||||||| |||||||||||  ||| ||     
T  37544516 caaccgcacaagtaagaaagacaccacactcttacccaaaaccttaaagtaatggatttatgggtcctctttcttataatgtgttcaacctttactattt 37544615  T
Q  219 tatccgatgtg 229  Q
    |||||||||||    
T  37544616 tatccgatgtg 37544626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 209
Target Start/End: Complemental strand, 40518203 - 40518113
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||| ||||||  |||||||||| ||||||||||| |||| ||||||||| || |||||||||| |  | |||||||| |||||||||||    
T  40518203 caaccacacaagcaagagagacgccacactcttacccaaaaccttaaggcattgggtttatgggtccatttacttataaggtgttcaacct 40518113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 123 - 188
Target Start/End: Complemental strand, 6651622 - 6651557
Alignment:
Q  123 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctct 188  Q
    ||||||||  |||||||| | ||||||||||| |||| ||||||||||||| ||||||||||||||    
T  6651622 cgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgaatttatgggttctct 6651557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 233
Target Start/End: Original strand, 6876913 - 6877002
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    ||||||||||| |||| | |||| |||||||| |||||||  ||| | |||||| |||||||||||  |||||| |||||||||||||||    
T  6876913 acactcttacccaaaaccctaagacaatgagtgtatgggtcatcttatttataaggtgttcaacctttacttttttatccgatgtgggac 6877002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 34835582 - 34835517
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||||||||| ||||  |||||||||||||||||||||| |||| |||||||| ||||| |||||    
T  34835582 acactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacct 34835517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 144 - 209
Target Start/End: Complemental strand, 34835848 - 34835783
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||||||||| ||||  |||||||||||||||||||||| |||| |||||||| ||||| |||||    
T  34835848 acactcttacccaaaactttaaggcaatgagtttatgggtcctcttacttataaggtgttaaacct 34835783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 145 - 229
Target Start/End: Original strand, 15836450 - 15836528
Alignment:
Q  145 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 229  Q
    |||| ||| |||||||||||||||||||||| |||||    |||||||||  |||||||||||||||||||| ||||| ||||||    
T  15836450 cacttttatctaaaatcttaaggcaatgagtctatgg----tctcactta--aagtgttcaacctccactttactatcggatgtg 15836528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 156 - 219
Target Start/End: Complemental strand, 4715371 - 4715308
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 219  Q
    |||||||||||  ||||||||||| | |  ||||| ||||||||||||||||||||||||||||    
T  4715371 aaaatcttaagataatgagtttatagatcgtctcatttataaagtgttcaacctccacttttct 4715308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 1014271 - 1014361
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||||||||||   ||||||| | ||||||||||| ||||  |||||| || ||||||| |||| |||| |||||||| |||||||||||    
T  1014271 caaccgcacaagcaggagagacaccacactcttacccaaaactttaaggtaacgagtttacgggtcctcttacttataaggtgttcaacct 1014361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 193
Target Start/End: Complemental strand, 6732027 - 6731953
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcactt 193  Q
    |||||||| |||  |||||||| | ||||||||||  |||| ||||||||||||| |||||||||||||| ||||    
T  6732027 caaccgcataagcaagagagacaccacactcttactcaaaaccttaaggcaatgaatttatgggttctcttactt 6731953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 135 - 209
Target Start/End: Complemental strand, 9507898 - 9507824
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    |||||||| ||||||||||| |||| ||||||| |||| ||||||| || |||| |||||||| || ||||||||    
T  9507898 agagacgccacactcttacccaaaaccttaaggtaatgggtttatgagtcctcttacttataaggtattcaacct 9507824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 119 - 184
Target Start/End: Complemental strand, 147952 - 147887
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggtt 184  Q
    |||| |||||||| |||||||| | ||||||||||| |||| |||||||||||  |||||||||||    
T  147952 caactgcacaagtaagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtt 147887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 1513966 - 1514059
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||| ||||| |||| |||||||  ||| ||||| |||| |||| |||||||| |||||||||||  ||| || |||||||||||||| ||||    
T  1513966 acacttttacccaaaaccttaaggttatgggtttaagggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggatatat 1514059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 125 - 218
Target Start/End: Complemental strand, 27856257 - 27856164
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||||||||||| | ||||| ||| | |||||||||||||| || ||||||| || ||||  ||||||  ||| |||||||| |||||||    
T  27856257 cacaagtgagagagacacaacacttttatccaaaatcttaaggcagtgggtttatgagtcctctatcttatattgtgctcaacctctacttttc 27856164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 237
Target Start/End: Original strand, 18371680 - 18371800
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| ||||||||||||| ||||||| || | ||||||||||| |||| |||||||| ||| ||||||||||  ||| ||||    | ||||||||||      
T  18371680 gctagagcaaccgcacaaatgagagacacaccacactcttacccaaaaccttaaggc-atgggtttatgggtcttcttactt----aatgttcaaccttt 18371774  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||| || ||||||||||| |||||||    
T  18371775 actattttatccgatgtgtgacatat 18371800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 209
Target Start/End: Complemental strand, 32305591 - 32305519
Alignment:
Q  137 agacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    |||||| ||||||||| | |||||||||||| |||| |||||| |||  ||| |||||||| |||||||||||    
T  32305591 agacgccacactcttatccaaaatcttaaggtaatgggtttataggtcttcttacttataaggtgttcaacct 32305519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 237
Target Start/End: Original strand, 18373004 - 18373075
Alignment:
Q  166 ggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||||||| || |||| | |||||| |||||||||||  ||| || ||||||| |||||||||||    
T  18373004 ggcaatgagtttatgagtcctcttatttataaggtgttcaacctttactattttatccgaagtgggacatat 18373075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 172
Target Start/End: Original strand, 20995440 - 20995495
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatg 172  Q
    ||||||| |||||||||||||||| | ||| ||||||| |||| ||||||||||||    
T  20995440 agcaaccacacaagtgagagagacaccacattcttacccaaaaccttaaggcaatg 20995495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Original strand, 20995502 - 20995545
Alignment:
Q  194 ataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||||||||||||||| |||| |||||| |||||||    
T  20995502 ataaagtgttcaacctccacttttttatctgatgtgagacatat 20995545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 237
Target Start/End: Original strand, 25561729 - 25561788
Alignment:
Q  178 atgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||| |||| |||||||| |||||||||||  ||| || |||||||||||||||||||    
T  25561729 atgggtactcttacttataaggtgttcaacctttactcttttatccgatgtgggacatat 25561788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 133 - 188
Target Start/End: Original strand, 32640572 - 32640627
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctct 188  Q
    |||||||||| ||||||||||| |||| |||||||||||| |||||| ||| ||||    
T  32640572 agagagacgcaacactcttacccaaaaccttaaggcaatgggtttatcggtcctct 32640627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Original strand, 41416252 - 41416315
Alignment:
Q  174 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||| | |||| |||||||| |||||||||||  ||| || |||||||||||||||||||    
T  41416252 gtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 41416315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 1013897 - 1014015
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||| | ||||||   ||||||||||  ||||   |||||||||| |||||| ||| |||| |||||||  ||||||||| |  ||| ||     
T  1013897 caaccgcacaagtaaaagagacaacacactcttactcaaaactctaaggcaatgggtttattggtcctcttacttatagggtgttcaacttttactattt 1013996  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||| ||||||    
T  1013997 tatccgatgtggaacatat 1014015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 174 - 220
Target Start/End: Original strand, 40417600 - 40417646
Alignment:
Q  174 gtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    |||||| |||||| | | |||||||||||||||||||||||||||||    
T  40417600 gtttataggttctattatttataaagtgttcaacctccacttttcta 40417646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 223
Target Start/End: Original strand, 40417748 - 40417846
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatcc 223  Q
    |||||||||||||||| | ||||| ||| | |||||||||| ||||||  |||| | ||  ||| ||||||||||| | ||||||||  ||||||||||    
T  40417748 cacaagtgagagagacaccacacttttatccaaaatcttaacgcaatggatttacgagtcatcttacttataaagtatccaacctccttttttctatcc 40417846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 226
Target Start/End: Original strand, 43398092 - 43398204
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatggg---ttctctcacttataaagtgttcaacctccac 213  Q
    ||||||||||| ||| | ||| |||| ||| ||||| | ||||  |||||||||||| ||||||||   | |||| | |||||| |||||||||||  ||    
T  43398092 agcaaccgcactagtaaaagaaacgccacattcttatccaaaactttaaggcaatgaatttatgggtcctcctcttatttataaggtgttcaacctttac 43398191  T
Q  214 ttttctatccgat 226  Q
    |||||||||||||    
T  43398192 ttttctatccgat 43398204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 154
Target Start/End: Original strand, 34629729 - 34629762
Alignment:
Q  121 accgcacaagtgagagagacgctacactcttacc 154  Q
    |||||||||||||||||||||| |||||||||||    
T  34629729 accgcacaagtgagagagacgccacactcttacc 34629762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 172
Target Start/End: Original strand, 40579295 - 40579348
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatg 172  Q
    ||||||||||||  |||||||| | ||||||||||| |||||| ||||||||||    
T  40579295 caaccgcacaagcaagagagacaccacactcttacccaaaatcctaaggcaatg 40579348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 221
Target Start/End: Original strand, 9620384 - 9620416
Alignment:
Q  189 cacttataaagtgttcaacctccacttttctat 221  Q
    |||||||||||||||||| ||||||||||||||    
T  9620384 cacttataaagtgttcaaactccacttttctat 9620416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 1085642 - 1085760
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||| |||||||||| ||||||||||| |||| |||||||||||| |||||||||| |||| ||||||||||||||||||||  ||| ||     
T  1085642 caaccacacaagtaagagagacgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaagtgttcaacctttactattt 1085741  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  1085742 tatccgatgtgggacatat 1085760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 7517712 - 7517594
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||||||| |||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  7517712 caaccacacaagtgagacagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttt 7517613  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  7517612 tatccgatgtgggacatat 7517594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 30244402 - 30244284
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||||||||||||| | ||||||||||| |||| |||||||||||| ||||||| || |||| |||||||| || ||||||||  ||| ||     
T  30244402 caaccacacaagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgagtcctcttacttataaggtcttcaacctttactcttt 30244303  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  30244302 tatccgatgtgggacatat 30244284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 45434762 - 45434650
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 224  Q
    ||||||| ||||||||   ||||||||||| |||| ||||||||| | ||||||||||| |||| |||||||| |||||||||||  |||||| ||||||    
T  45434762 cacaagtaagagagacatcacactcttacccaaaaccttaaggcagtaagtttatgggtcctcttacttataaggtgttcaacctttacttttttatccg 45434663  T
Q  225 atgtgggacatat 237  Q
    |||||||||||||    
T  45434662 atgtgggacatat 45434650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 119 - 230
Target Start/End: Original strand, 22567065 - 22567176
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  ||| ||     
T  22567065 caaccccacaagcaagagagacaccacactcttaccaaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactcttt 22567164  T
Q  219 tatccgatgtgg 230  Q
    ||||||||||||    
T  22567165 tatccgatgtgg 22567176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 24177567 - 24177449
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||||| ||||||||||| ||||  ||||||||||| |||||||||| | || |||||||| ||||||| |||  ||| ||     
T  24177567 caaccgcacaagcaagagagacgccacactcttaccaaaaactttaaggcaatgggtttatgggtccgcttacttataaggtgttcagcctttactcttt 24177468  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  24177467 tatccgatgtgggacatat 24177449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 22566713 - 22566806
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || |||||||||||||||||||    
T  22566713 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatat 22566806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 7554151 - 7554039
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 224  Q
    |||||| ||||||||| | ||||||||||| |||| |||||||| ||| |||||||| | |||| |||||||| |||||||||||  ||| || ||||||    
T  7554151 cacaagcgagagagacaccacactcttacccaaaaccttaaggctatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccg 7554052  T
Q  225 atgtgggacatat 237  Q
    |||||||||||||    
T  7554051 atgtgggacatat 7554039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 30245195 - 30245091
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||||||  ||| |||||||| |||||||||||  ||| || |||||||||||| |    
T  30245195 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggtcgtcttacttataaggtgttcaacctttactcttttatccgatgtggaa 30245096  T
Q  233 catat 237  Q
    |||||    
T  30245095 catat 30245091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 34218067 - 34218178
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccga 225  Q
    ||||| ||||||||| | ||||||||||| |||| |||||| ||||| ||||||| || ||||||||||||| ||||||||| |  |||||| |||||||    
T  34218067 acaagcgagagagacaccacactcttacccaaaaccttaagacaatgggtttatgagtcctctcacttataaggtgttcaacatttacttttttatccga 34218166  T
Q  226 tgtgggacatat 237  Q
    |||| |||||||    
T  34218167 tgtgagacatat 34218178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 45433373 - 45433262
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||||| ||||||||||||||||  ||||||| ||||||| |||||||| |||||||||||  ||| ||     
T  45433373 caaccccacaagcaagagagacaccacactcttacccaaaatcttaaggcaataggtttatgagttctcttacttataaggtgttcaacctttactcttt 45433274  T
Q  219 tatccgatgtgg 230  Q
    ||||||||||||    
T  45433273 tatccgatgtgg 45433262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 23403 - 23521
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||||| |  |||||||| | ||||||||||| |||| |||||||||||  |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  23403 caaccgcacatgcaagagagacaccacactcttacccaaaaccttaaggcaataggtttatgggtcctcttacttataaggtgttcaacctttactattg 23502  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||| ||||||    
T  23503 tatccgatgtggaacatat 23521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 123 - 237
Target Start/End: Original strand, 37533041 - 37533154
Alignment:
Q  123 cgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 222  Q
    ||||||||  |||||||| | ||||| ||||| |||| ||||||||||||||||||||||| |||| |||||||| |||||||||||  ||| || ||||    
T  37533041 cgcacaagcaagagagacaccacact-ttacccaaaaccttaaggcaatgagtttatgggtcctcttacttataaggtgttcaacctttactattttatc 37533139  T
Q  223 cgatgtgggacatat 237  Q
    | |||||||||||||    
T  37533140 caatgtgggacatat 37533154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 10341903 - 10341846
Alignment:
Q  180 gggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  10341903 gggttctcccacttataaagtgttcaacctccacttttctatccgatgtgagacatat 10341846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 30253610 - 30253533
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctc 210  Q
    |||||||| | ||||||||||| |||| |||||||||||||||||||||||||||| |||||||| || |||||||||    
T  30253610 agagagacaccacactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttataaggtcttcaacctc 30253533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 117 - 222
Target Start/End: Complemental strand, 37346052 - 37345947
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    |||||| | ||||||||||||||||  ||||||||||  ||||  ||||||||||  ||||||||||  ||||||||||||| |||| ||||||||||||    
T  37346052 agcaactgtacaagtgagagagacgtcacactcttactcaaaactttaaggcaatatgtttatgggtcttctcacttataaaatgtttaacctccacttt 37345953  T
Q  217 tctatc 222  Q
    ||||||    
T  37345952 tctatc 37345947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 237
Target Start/End: Complemental strand, 16569302 - 16569210
Alignment:
Q  145 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||| |||| |||||||||||| |||||||||| |||| |||||||| || ||||||||  ||| |||||||||||||| |||||||    
T  16569302 cactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatat 16569210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 16596360 - 16596452
Alignment:
Q  145 cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||| |||| |||||||||||| |||||||||| |||| |||||||| || ||||||||  ||| |||||||||||||| |||||||    
T  16596360 cactcttaccaaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtattcaacctttactgttctatccgatgtgagacatat 16596452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 235
Target Start/End: Original strand, 4124123 - 4124230
Alignment:
Q  128 aagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatg 227  Q
    ||||||||||||| | ||||| ||| | |||| ||||| ||||||||||||| ||| ||||||||||||||||||  |||||| | ||||||| ||||||    
T  4124123 aagtgagagagacaccacacttttatccaaaaccttaatgcaatgagtttattggtcctctcacttataaagtgtcaaacctcaaattttctaaccgatg 4124222  T
Q  228 tgggacat 235  Q
    | ||||||    
T  4124223 taggacat 4124230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 6054677 - 6054574
Alignment:
Q  134 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    ||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| ||||||||| |  ||| || ||||||||||| |||    
T  6054677 gagagacaccacactcttacccaaaaccttaaggcaatgtgtttatgggtcctcttacttataaggtgttcaacatttactattttatccgatgtgagac 6054578  T
Q  234 atat 237  Q
    ||||    
T  6054577 atat 6054574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 11845323 - 11845205
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||| |||||||  |||||||| | ||||||||| | |||| ||||||||||||  ||||||||| |||| |||||||| |||||||||||  ||| ||     
T  11845323 caactgcacaagcaagagagacaccacactcttatccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacctttactattt 11845224  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||| ||||||    
T  11845223 tatccgatgtggaacatat 11845205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 118340 - 118445
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 231  Q
    |||| |||||| ||||||||||| |||| |||| || |||| |||||||| | |||| |||||| | |||||||||||  ||||||||||| ||||||||    
T  118340 gagatagacgccacactcttacccaaaaccttacggtaatgggtttatggatcctcttacttattaggtgttcaacctttacttttctatctgatgtggg 118439  T
Q  232 acatat 237  Q
    ||||||    
T  118440 acatat 118445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 205
Target Start/End: Original strand, 28300293 - 28300366
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttat-gggttctctcacttataaagtgttca 205  Q
    |||||||||| ||||||||||| ||||||||||||||||| |||||| ||||||||| |||||||| |||||||    
T  28300293 agagagacgccacactcttacccaaaatcttaaggcaatgggtttatggggttctcttacttataaggtgttca 28300366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 1085299 - 1085391
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacata 236  Q
    ||||||||||| |||| |||||||||||||||||||||||||||| |||||| |  |||||||| |  ||| || |||||||| |||||||||    
T  1085299 acactcttacccaaaaccttaaggcaatgagtttatgggttctcttacttatgagttgttcaacttttactattttatccgatatgggacata 1085391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 29157683 - 29157579
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| ||||||||||||  |||||||||  ||| |||||||| |||||||||||  ||| || |||||| |||||||    
T  29157683 agagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcgtcttacttataaggtgttcaacctttactattttatccggtgtggga 29157584  T
Q  233 catat 237  Q
    |||||    
T  29157583 catat 29157579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 237
Target Start/End: Original strand, 36534825 - 36534928
Alignment:
Q  134 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    ||||||||| ||||||||||| |||| |||||| |  |  |||||||||| |||| |||||||| |||||||||||| ||| || ||||||| |||||||    
T  36534825 gagagacgccacactcttacccaaaaccttaagactttaggtttatgggtcctcttacttataaggtgttcaacctctactgttttatccgaggtgggac 36534924  T
Q  234 atat 237  Q
    ||||    
T  36534925 atat 36534928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 209
Target Start/End: Original strand, 37533390 - 37533480
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    ||||||||||||  | |||||| | ||||||||||| |||| ||||||||||||  ||||||||| |||| |||||||| |||||||||||    
T  37533390 caaccgcacaagcaaaagagacaccacactcttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacct 37533480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 40094800 - 40094918
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||||| ||||||||||| |||| |||||| | ||| |||||||||| |||| |||||||| ||||| |||||  ||| ||     
T  40094800 caacctcacaagcaagagagacgccacactcttacccaaaaccttaagacgatgggtttatgggtcctcttacttataaggtgttgaacctttactcttt 40094899  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| ||||||| |||||||    
T  40094900 tattcgatgtgagacatat 40094918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 41910657 - 41910738
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| ||||| |||||||||| |||||| |||||| || ||||||||  ||| || |||||||||||||||||||    
T  41910657 aaaatcttaagccaatgggtttatgggtcctctcagttataaggtattcaacctttactcttttatccgatgtgggacatat 41910738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 237
Target Start/End: Original strand, 8128458 - 8128585
Alignment:
Q  110 atgctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    |||||| | ||||| || ||| ||||| ||| | ||||||||| | |||| |||||||  ||| |||||||||| |||| || ||||| |||||||||||    
T  8128458 atgctagaacaaccacataagcgagagtgacaccacactcttaaccaaaaccttaaggttatgggtttatgggtcctcttacatataaggtgttcaacct 8128557  T
Q  210 ccacttttctatccgatgtgggacatat 237  Q
      | ||||||||||||| ||||||||||    
T  8128558 ttatttttctatccgatatgggacatat 8128585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 237
Target Start/End: Complemental strand, 14681627 - 14681524
Alignment:
Q  134 gagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    ||||||| | ||||||||||| |||| |||||| ||||| |||||||||  |||| ||||| || |||||||||||  ||| || |||| ||||||||||    
T  14681627 gagagacaccacactcttacccaaaaccttaagacaatgggtttatgggccctcttacttacaaggtgttcaacctttactattttatctgatgtgggac 14681528  T
Q  234 atat 237  Q
    ||||    
T  14681527 atat 14681524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 19122863 - 19122752
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  ||| |||| | ||||||||||| |||| ||||||||||||  |||||| || |||| |||||||| |||||||||||  ||| ||     
T  19122863 caaccacacaagcaagatagacaccacactcttacccaaaaccttaaggcaatggatttatgagtcctcttacttataaggtgttcaacctttactattt 19122764  T
Q  219 tatccgatgtgg 230  Q
    ||||||||||||    
T  19122763 tatccgatgtgg 19122752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 163 - 237
Target Start/End: Original strand, 28301613 - 28301687
Alignment:
Q  163 taaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||| |||||||||| |||| |||||||| ||||||| | |  |||||||||||||||||| |||||||    
T  28301613 taaggcaatgggtttatgggtcctcttacttataaggtgttcagcttttacttttctatccgatgtgagacatat 28301687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 226
Target Start/End: Complemental strand, 15902426 - 15902325
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 224  Q
    |||||||||||| ||| | ||||| ||| | |||| |||||| ||| ||| ||||| ||  | ||||||||||||||||||||||||||||| | |||||    
T  15902426 cacaagtgagagcgacaccacacttttatccaaaaccttaagacaacgagcttatgtgtgatttcacttataaagtgttcaacctccactttcccatccg 15902327  T
Q  225 at 226  Q
    ||    
T  15902326 at 15902325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 230
Target Start/End: Complemental strand, 10342338 - 10342275
Alignment:
Q  169 aatgagtttatgggttctctc--acttataaagtgttcaacctccacttttctatccgatgtgg 230  Q
    |||||||||||||||||||||  |||||||||||||| |||||| ||||||||||  |||||||    
T  10342338 aatgagtttatgggttctctcccacttataaagtgtttaacctctacttttctatatgatgtgg 10342275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 176 - 220
Target Start/End: Original strand, 42282101 - 42282145
Alignment:
Q  176 ttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    |||||||| || |||||||||||||||||||||||||||||||||    
T  42282101 ttatgggtcctttcacttataaagtgttcaacctccacttttcta 42282145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 9901775 - 9901665
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||| ||  |||||||| | ||||||||||| |||| |||||| |||||||||||||| | |||| || |||||  ||||||||||  ||| ||     
T  9901775 caaccgcactagcaagagagacaccacactcttacccaaaaccttaagacaatgagtttatggatcctct-acgtataagatgttcaacctttactgttt 9901677  T
Q  219 tatccgatgtgg 230  Q
    ||||||||||||    
T  9901676 tatccgatgtgg 9901665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 150 - 237
Target Start/End: Complemental strand, 43241596 - 43241509
Alignment:
Q  150 ttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||| |||||| |||| |||||||| || || | |||||||| |||||||||||  | |||| |||||||||||| ||||||    
T  43241596 ttacctaaaaccttaagtcaataagtttatgagtccttttacttataaggtgttcaacctttatttttttatccgatgtggaacatat 43241509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 45754847 - 45754736
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| |||||||| ||| ||||||| ||  ||| |||||||| ||||||||| |  ||| ||     
T  45754847 caaccacacaagcaagagagacaccacactcttacccaaaaccttaaggctatgggtttatgagtcatcttacttataaggtgttcaacatttactattt 45754748  T
Q  219 tatccgatgtgg 230  Q
    ||||||||||||    
T  45754747 tatccgatgtgg 45754736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 130 - 237
Target Start/End: Complemental strand, 47129216 - 47129109
Alignment:
Q  130 gtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtg 229  Q
    ||||||||||| | |||||| |||| |||| ||||| || ||| |||||||||| |||| ||||||||   |||||||||  ||| || |||||||||||    
T  47129216 gtgagagagacaccacactcctacccaaaaccttaaagcgatgggtttatgggtcctcttacttataagaggttcaacctttactattttatccgatgtg 47129117  T
Q  230 ggacatat 237  Q
     |||||||    
T  47129116 agacatat 47129109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 147 - 237
Target Start/End: Complemental strand, 20599418 - 20599328
Alignment:
Q  147 ctcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||| ||||  ||||||||||||||||||  || |||| | |||||||||||| | |||  |||||| |||||||| ||||||||||    
T  20599418 ctcttacccaaaacgttaaggcaatgagtttatatgtcctcttatttataaagtgtttatcctttacttttttatccgatatgggacatat 20599328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 30032699 - 30032581
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  ||||||| |  ||||||||||| |||| |||||||| ||  |||||||| | |||| |||||||| |||||||||    ||| ||     
T  30032699 caaccgcacaagcaagagagatgtcacactcttacccaaaaccttaaggctataggtttatggatactcttacttataaggtgttcaacacttactcttt 30032600  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| |||||||||||||||    
T  30032599 tattcgatgtgggacatat 30032581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 36939759 - 36939877
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| |||  ||||| || | ||||| ||||| |||| ||||||||||||  ||||||||| |||| |||||||| ||||||||| |  ||| ||     
T  36939759 caaccgcataagcaagagaaacaccacacttttacccaaaaccttaaggcaatggatttatgggtcctcttacttataaggtgttcaacttttactattt 36939858  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| |||| ||||||||||    
T  36939859 tatacgatttgggacatat 36939877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 237
Target Start/End: Complemental strand, 36623086 - 36622974
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccg 224  Q
    ||||||| |||||| | | | |||| |||| |||| ||||||||||||  ||||||| | |||  ||||||||| |||| |||||  ||| || ||||||    
T  36623086 cacaagtaagagaggcaccatactcctacccaaaaccttaaggcaatggatttatggatcctcctacttataaaatgtttaacctttactattttatccg 36622987  T
Q  225 atgtgggacatat 237  Q
    |||||||||||||    
T  36622986 atgtgggacatat 36622974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 40230331 - 40230435
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | | ||| ||||| |||| |||||| | ||| |||||||||| |||| ||||||||  |||||||| |  |||||| ||| ||||||||||    
T  40230331 agagagacaccagacttttacccaaaaccttaagactatgggtttatgggtcctcttacttataagatgttcaacttttacttttttattcgatgtggga 40230430  T
Q  233 catat 237  Q
    |||||    
T  40230431 catat 40230435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 24838727 - 24838846
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttc-tctcacttataaagtgttcaacctccactttt 217  Q
    ||||| ||||||  |||||||||  ||||||||||| |||| |||||| ||| | |||||||| | | ||| |||||||| |||||||||||  ||| ||    
T  24838727 caaccacacaagcaagagagacgtcacactcttacccaaaaccttaagacaacgggtttatggatccttcttacttataaggtgttcaacctttactctt 24838826  T
Q  218 ctatccgatgtgggacatat 237  Q
     ||| ||||||| |||||||    
T  24838827 ttattcgatgtgagacatat 24838846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 180
Target Start/End: Complemental strand, 37345715 - 37345652
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatg 180  Q
    |||||||| ||||||||||||||||  | ||||||||| |||| |||||||||||  |||||||    
T  37345715 agcaaccgtacaagtgagagagacgtcagactcttaccaaaaaccttaaggcaatatgtttatg 37345652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 233
Target Start/End: Original strand, 45335547 - 45335605
Alignment:
Q  174 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggac 233  Q
    |||||||||||||||||||||||||||| ||||| |||| ||||| |||| || ||||||    
T  45335547 gtttatgggttctctcacttataaagtgctcaacatcca-ttttccatccaatctgggac 45335605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 30255405 - 30255353
Alignment:
Q  185 ctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||| |||||||| |||||||||||  ||| || |||||||||||||||||||    
T  30255405 ctcttacttataaggtgttcaacctttactcttttatccgatgtgggacatat 30255353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 46899401 - 46899448
Alignment:
Q  169 aatgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||||||||||| |||||| |||||| ||||||||| |||||||||||    
T  46899401 aatgagtttatggattctctaacttat-aagtgttcatcctccactttt 46899448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 71; Significance: 3e-32; HSPs: 55)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 1028543 - 1028661
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||||||||||||||||||| ||||||||||| |||| |||||||  ||  |||||||||| |||| |||||||||||||||| |||  |||||||    
T  1028543 caaccgcacaagtgagagagacgccacactcttaccaaaaaccttaaggttataggtttatgggtcctcttacttataaagtgttcatcctttacttttc 1028642  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  1028643 tatccgatgtgggacatat 1028661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 118 - 237
Target Start/End: Complemental strand, 31509865 - 31509745
Alignment:
Q  118 gcaaccgcacaagtgagagagacgctacactcttacctaaaatctt-aaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| ||||| ||||||||| | ||| ||||||| |||| | | ||||||||||||||||| || ||||||||||||||||| ||||||||||||||    
T  31509865 gcaaccgtacaagcgagagagacaccacattcttaccaaaaaacctcaaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttt 31509766  T
Q  217 tctatccgatgtgggacatat 237  Q
    ||||||||||||| |||||||    
T  31509765 tctatccgatgtgagacatat 31509745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 132 - 237
Target Start/End: Complemental strand, 31509743 - 31509637
Alignment:
Q  132 gagagagacgctacactcttacctaaaatctt-aaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgg 230  Q
    ||||||||| ||||| ||||||| |||| | | ||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||     
T  31509743 gagagagacactacattcttaccaaaaaacctcaaggcaatgagtttatgagtcctctcacttataaagtgctcaacctccacttttctatccgatgtga 31509644  T
Q  231 gacatat 237  Q
    |||||||    
T  31509643 gacatat 31509637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 41632914 - 41632796
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||||||||| ||| || |||||||||| |||| |||||||| |||||||||||  |||||||    
T  41632914 caaccgcacaagcaagagagacaccacactcttacccaaaatcttaaagcattgggtttatgggtcctcttacttataaggtgttcaacctttacttttc 41632815  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||||||| |||||||    
T  41632814 tatccgatgtgagacatat 41632796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 132 - 237
Target Start/End: Original strand, 36568606 - 36568711
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 231  Q
    ||||||||||| ||||||||||| |||| |||||||||||| ||||| ||||  |||||||||||| ||||||||| |  ||||||||||||||||||||    
T  36568606 gagagagacgccacactcttaccaaaaaccttaaggcaatgggtttacgggtcatctcacttataaggtgttcaacttttacttttctatccgatgtggg 36568705  T
Q  232 acatat 237  Q
    ||||||    
T  36568706 acatat 36568711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 36521920 - 36522040
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| ||||| ||||||||| |  ||||||||||| |||| |||||||||||  |||||||||| |||||| ||| | ||||||||||||| |||||    
T  36521920 agcaaccacacaaatgagagagatgacacactcttacccaaaaccttaaggcaattggtttatgggtcctctcatttaaagagtgttcaacctcaacttt 36522019  T
Q  217 tctatccgatgtgggacatat 237  Q
    |||||| ||||||||||||||    
T  36522020 tctatctgatgtgggacatat 36522040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 36522261 - 36522381
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    |||| ||||||||||||||||||| | ||||||||||| |||| ||||||  |||| |||||| ||| |||||||||||||| |||||||| |||| |||    
T  36522261 agcagccgcacaagtgagagagacaccacactcttacccaaaaccttaagataatgggtttattggtcctctcacttataaaatgttcaacttccatttt 36522360  T
Q  217 tctatccgatgtgggacatat 237  Q
    ||||||| ||||| |||||||    
T  36522361 tctatccaatgtgagacatat 36522381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 34753051 - 34753169
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||||| ||||||||||| |||| |||||||||||  ||||||||||  ||| |||||||| ||||||||| |  |||||||    
T  34753051 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggcaatcggtttatgggtcttcttacttataaggtgttcaacttttacttttc 34753150  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||| |||||||||||||    
T  34753151 tatccaatgtgggacatat 34753169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 9498694 - 9498798
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| ||||||||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||||||| |||||| ||    
T  9498694 agagagacaccacactcttacccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattctatctgatgtgaga 9498793  T
Q  233 catat 237  Q
    |||||    
T  9498794 catat 9498798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 117 - 237
Target Start/End: Complemental strand, 26074746 - 26074626
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| ||| |||||||||||| | ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| |    
T  26074746 agcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactct 26074647  T
Q  217 tctatccgatgtgggacatat 237  Q
    | |||||||| ||| ||||||    
T  26074646 tttatccgatatggaacatat 26074626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 13415786 - 13415904
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||||| ||||||||||| |||| ||||||| |||  |||||||||| |||| |||||||| |||||||||||  |||  |     
T  13415786 caaccgcacaagcaagagagacgccacactcttacccaaaaccttaaggtaataggtttatgggtcctcttacttataaggtgttcaacctttactaatt 13415885  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  13415886 tatccgatgtgggacatat 13415904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 33747903 - 33747785
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||| |||  |||||||| | ||||||||| | |||||||||||||||||||||||||| | |||| ||||||||||| || |||||  ||| ||     
T  33747903 caaccgcataaggaagagagacaccacactcttatccaaaatcttaaggcaatgagtttatggatcctcttacttataaagtatttaacctttactattt 33747804  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  33747803 tatccgatgtgggacatat 33747785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 40296341 - 40296459
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| || ||||||||| |||||||||| |||| |||||||| |||||||||||   || ||     
T  40296341 caaccgcacaagcaagagagacaccacactcttacccaaaacctcaaggcaatgggtttatgggtcctcttacttataaggtgttcaaccttttctattt 40296440  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  40296441 tatccgatgtgggacatat 40296459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 18603160 - 18603264
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    ||||||| || ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || |||| |||||||||    
T  18603160 agagagatgccacactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatctgatgtggga 18603259  T
Q  233 catat 237  Q
    |||||    
T  18603260 catat 18603264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 237
Target Start/End: Original strand, 26074170 - 26074290
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| ||| |||||||||||| | ||||||||||| |||| |||||||||||| ||| |||||| |||| || ||| | |||||||||||  |||||    
T  26074170 agcaaccacactagtgagagagacaccacactcttacccaaaaccttaaggcaatgggttcatgggtcctcttacatatgaggtgttcaacctttacttt 26074269  T
Q  217 tctatccgatgtgggacatat 237  Q
    | ||||||||||| |||||||    
T  26074270 tttatccgatgtgtgacatat 26074290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 110 - 237
Target Start/End: Complemental strand, 299630 - 299503
Alignment:
Q  110 atgctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacct 209  Q
    |||||| | |||||| |||||  | |||||||| ||||||||||  |||| |||||||| ||||||||||||||  ||| |||||||| |||||||||||    
T  299630 atgctagaacaaccgtacaagcaatagagacgccacactcttacacaaaaccttaaggctatgagtttatgggtcatcttacttataaggtgttcaacct 299531  T
Q  210 ccacttttctatccgatgtgggacatat 237  Q
      ||| || |||||||||||||||||||    
T  299530 ttactgttttatccgatgtgggacatat 299503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 24489232 - 24489348
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||| | |||||||| ||||||||||  ||||||||||||||||| ||||||||||  ||| ||| |||| ||||| |||||   ||||||    
T  24489232 caaccgcacaagtaaaagagacgccacactcttacgcaaaatcttaaggcaatgggtttatgggt--tcttactaataaggtgtttaaccttttcttttc 24489329  T
Q  219 tatccgatgtgggacatat 237  Q
    |||| ||||||||||||||    
T  24489330 tatctgatgtgggacatat 24489348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 120 - 230
Target Start/End: Complemental strand, 6500953 - 6500843
Alignment:
Q  120 aaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttct 219  Q
    |||||||||||| |||||||| | ||||||||| | |||| ||||||||||||||||||||||| || | | |||||| |||||||||||  ||| || |    
T  6500953 aaccgcacaagtaagagagacaccacactcttatccaaaaccttaaggcaatgagtttatgggtccttttatttataaggtgttcaacctttactatttt 6500854  T
Q  220 atccgatgtgg 230  Q
    |||||||||||    
T  6500853 atccgatgtgg 6500843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 38427679 - 38427562
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    |||||||||||||||||||||||  ||||||||||  |||| |||||| |||||  || |||||| |||| ||||||||  ||||||||||  |||||||    
T  38427679 caaccgcacaagtgagagagacgtcacactcttacacaaaaccttaagacaatggattaatgggtcctct-acttataagatgttcaacctttacttttc 38427581  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||| |||||||||||||    
T  38427580 tatccaatgtgggacatat 38427562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 6224303 - 6224210
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||||| |||||||||||||| |||| |||||||| |||||||||||  ||| || ||||||| |||||||||||    
T  6224303 acactcttaccaaaaaccttaaggcgatgagtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgaagtgggacatat 6224210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 41170741 - 41170648
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| ||||||||  ||||||||||  ||| || |||||||||||||||||||    
T  41170741 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataagatgttcaacctttactattttatccgatgtgggacatat 41170648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 119 - 230
Target Start/End: Complemental strand, 6500582 - 6500471
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| | ||||||||||| |||| |||||||||||| |||||  ||| |||| |||||||| |||||||||||  ||| ||     
T  6500582 caaccgcacaagcaagagagacaccacactcttacccaaaaccttaaggcaatgggtttaaaggtcctcttacttataaggtgttcaacctttactattt 6500483  T
Q  219 tatccgatgtgg 230  Q
    ||||||||||||    
T  6500482 tatccgatgtgg 6500471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 624328 - 624210
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||||||||||||| | ||||||||||| |||| || ||||| ||| ||||||||||  ||| |||||||| |||||||||||  ||| ||     
T  624328 caaccccacaagtgagagagacaccacactcttacccaaaacctcaaggctatgggtttatgggtcatcttacttataacgtgttcaacctttactattt 624229  T
Q  219 tatccgatgtgggacatat 237  Q
    ||| | |||||||||||||    
T  624228 tatacaatgtgggacatat 624210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 27502062 - 27502180
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||| ||||| ||||||||||||||||  |||||||||| |||| |||||||| ||||| |||||  ||| ||     
T  27502062 caaccacacaagcaagagagacaccacacttttaccaaaaatcttaaggcaataggtttatgggtcctcttacttataaggtgtttaacctttactattt 27502161  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||| |||||||||||||    
T  27502162 tatccaatgtgggacatat 27502180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 35150138 - 35150021
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||| |||||||||||| | ||||| ||||| |||| |||||| |||||  ||||||||| |||| |||||||| |||||||||||  ||| ||     
T  35150138 caaccacactagtgagagagacaccacacttttacccaaaaccttaagacaatggatttatgggt-ctcttacttataaggtgttcaaccttgactcttt 35150040  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  35150039 tatccgatgtgggacatat 35150021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 12662703 - 12662796
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||| |||||  |||||||||| ||| ||||||||| ||||||||||  ||| || |||||||||||||||||||    
T  12662703 acactcttacccaaaaacttaagacaatggatttatgggttttcttacttataaaatgttcaacctttactattttatccgatgtgggacatat 12662796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 26075201 - 26075306
Alignment:
Q  133 agagagacgctacactctt-acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 231  Q
    |||||||||  |||||||| ||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||||| |    
T  26075201 agagagacgacacactctttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttatccgatgtgag 26075300  T
Q  232 acatat 237  Q
    ||||||    
T  26075301 acatat 26075306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 144 - 237
Target Start/End: Complemental strand, 32487500 - 32487408
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| |||||| | |||||||||||  ||| || |||||||||||||||||||    
T  32487500 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttat-aggtgttcaacctttactattttatccgatgtgggacatat 32487408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 3295055 - 3295159
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | |||||| |||| |||| || ||||||||| ||||||||||  ||| |||||||| |||||||||||  ||| || ||||||||||||||    
T  3295055 agagagacaccacactcatacccaaaacctcaaggcaatgggtttatgggtcttcttacttataaggtgttcaacctttactattttatccgatgtggga 3295154  T
Q  233 catat 237  Q
    |||||    
T  3295155 catat 3295159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 119 - 235
Target Start/End: Original strand, 26590936 - 26591052
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||| |||||||||||||| ||||||||||  |||| ||||||||| ||| ||||||| | |||| |||||||| |||||||||||  |||||||    
T  26590936 caaccacactagtgagagagacgccacactcttactcaaaaccttaaggcattgaatttatggatcctcttacttataaggtgttcaacctttacttttc 26591035  T
Q  219 tatccgatgtgggacat 235  Q
     || |||| ||| ||||    
T  26591036 gattcgatatggaacat 26591052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 623950 - 623832
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| |||||||||||||||| | ||||||||||  |||| |||||||| || ||||||||| |   || |||| |||||||||||||||  ||| ||     
T  623950 caaccccacaagtgagagagacaccacactcttactcaaaaccttaaggctataagtttatggctcaacttacttgtaaagtgttcaacctttactatta 623851  T
Q  219 tatccgatgtgggacatat 237  Q
    ||||||||||| |||||||    
T  623850 tatccgatgtgagacatat 623832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 3295371 - 3295488
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  ||||||||   ||||||||||| |||| |||||||||||  |||||||||| |||| |||||||| |||||||||||  ||| ||     
T  3295371 caaccacacaagcaagagagacaacacactcttacc-aaaaccttaaggcaattggtttatgggtcctcttacttataaggtgttcaacctttactattt 3295469  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||| ||||||    
T  3295470 tatccgatgtggaacatat 3295488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 36492243 - 36492361
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||| ||||||  |||||||| | ||||||||| | |||| || |||| |||| |||||| ||| |||| |||||||| |||||||||||  ||| ||     
T  36492243 caaccacacaagcaagagagacaccacactcttatccaaaacctaaaggtaatgtgtttattggtcctcttacttataaggtgttcaacctttactcttt 36492342  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  36492343 tatccgatgtgggacatat 36492361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 11417028 - 11417121
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||  |||| |||||||||||| |||||||| | |||| |||||||| |||||||||||  ||| || |||||||||||| ||||||    
T  11417028 acactcttacacaaaaccttaaggcaatgggtttatggatcctcttacttataaggtgttcaacctttactattttatccgatgtggaacatat 11417121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 221
Target Start/End: Original strand, 9510544 - 9510648
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttt 216  Q
    ||||||| ||||||| |||||||| ||| | | ||||||||||| |||||||| |  |||||||| | ||||||||||||||    ||||||||||||||    
T  9510544 agcaaccacacaagtaagagagacactatatttttacctaaaattttaaggcattaggtttatggctcctctcacttataaatgactcaacctccacttt 9510643  T
Q  217 tctat 221  Q
    |||||    
T  9510644 tctat 9510648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 126 - 222
Target Start/End: Complemental strand, 19275653 - 19275558
Alignment:
Q  126 acaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatc 222  Q
    ||||| |||| |||||| ||| ||||||| ||||||||||| |||||| |||||||||  |||  ||||| |||||||||||||| |||||||||||    
T  19275653 acaagcgagacagacgccacaatcttacccaaaatcttaagacaatgaatttatgggtcttcttccttat-aagtgttcaacctctacttttctatc 19275558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 25328053 - 25327949
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| ||||||||| |  |||||||||| |||| |||||||| ||||||||| |  ||| || |||||||||| |||    
T  25328053 agagagacaccacactcttacccaaaaccttaaggcattaggtttatgggtcctcttacttataaggtgttcaacttttactgttttatccgatgtagga 25327954  T
Q  233 catat 237  Q
    |||||    
T  25327953 catat 25327949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 142 - 237
Target Start/End: Complemental strand, 2411116 - 2411021
Alignment:
Q  142 ctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||||  |||| ||||||||||| |||||||||||||||| ||||| ||  |||||||| |  |||| ||||||| |||| ||||||||    
T  2411116 ctacactcttactcaaaaccttaaggcaataagtttatgggttctcttacttacaagatgttcaacttttacttctctatccaatgtaggacatat 2411021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 119 - 237
Target Start/End: Original strand, 5723817 - 5723935
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||||||||  |||||||| ||| |||||| || |||| |||||| |||| | || ||||||||||| || ||||| ||||||||| |  | | ||     
T  5723817 caaccgcacaagcaagagagacactatactctttcccaaaaccttaagacaataaattaatgggttctcttacatataatgtgttcaacttttattattt 5723916  T
Q  219 tatccgatgtgggacatat 237  Q
    |||||||||||||||||||    
T  5723917 tatccgatgtgggacatat 5723935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 26074821 - 26074926
Alignment:
Q  133 agagagacgctacactctt-acctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggg 231  Q
    |||||||||| |||||||| ||| |||| |||||| ||||  |||||||||| |||  |||||||  |||||||||||  ||| || |||||||||||||    
T  26074821 agagagacgccacactctttacccaaaaccttaagacaataggtttatgggtcctcctacttatattgtgttcaacctttactcttttatccgatgtggg 26074920  T
Q  232 acatat 237  Q
    ||||||    
T  26074921 acatat 26074926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 125 - 194
Target Start/End: Original strand, 36527127 - 36527196
Alignment:
Q  125 cacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcactta 194  Q
    ||||||||||||||||   ||||||||| | ||||||||||||||||| |||||||| | ||||||||||    
T  36527127 cacaagtgagagagacagcacactcttatccaaaatcttaaggcaatgcgtttatggatcctctcactta 36527196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 15370217 - 15370113
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||||| |||| ||||||||  ||  ||||||||| |||| ||||||||  ||||||||||  ||| || ||| ||||||||||    
T  15370217 agagagacaccacactcttacccaaaaccttaaggctgtggatttatgggtcctcttacttataagatgttcaacctttactattttattcgatgtggga 15370118  T
Q  233 catat 237  Q
    |||||    
T  15370117 catat 15370113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 226
Target Start/End: Original strand, 3622914 - 3623013
Alignment:
Q  118 gcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    |||||| ||| ||||| |||||||  |||||||||||||||| ||||||||||||        | |||| ||||||||| |||||||||| |||||||||    
T  3622914 gcaaccacactagtgacagagacgtcacactcttacctaaaa-cttaaggcaatg--------gattctttcacttatagagtgttcaacttccactttt 3623004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 156 - 237
Target Start/End: Complemental strand, 42508707 - 42508626
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||| |||||||||||| ||||||| || |||| |||||| |  |||| |||||  ||||||||||||||||||||| ||||    
T  42508707 aaaaccttaaggcaatgggtttatgagtcctcttacttattagatgtttaacctttacttttctatccgatgtgggatatat 42508626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 229
Target Start/End: Original strand, 13786037 - 13786136
Alignment:
Q  129 agtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgt 228  Q
    ||||||||||||   ||||||||| | ||||||||||| ||||   |||| ||||  ||| |||||||||||||||||||  ||||||| ||||||||||    
T  13786037 agtgagagagacatcacactcttatccaaaatcttaagacaatagatttacgggtcatcttacttataaagtgttcaaccatcactttt-tatccgatgt 13786135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 201
Target Start/End: Complemental strand, 32446019 - 32445935
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtg 201  Q
    |||||||  ||||||||||||||| | ||||| | ||| |||| ||||||||  || |||||||||| ||||||||| |||||||    
T  32446019 agcaacctaacaagtgagagagacaccacactttaacccaaaaccttaaggcgttgggtttatgggtcctctcacttgtaaagtg 32445935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 26074395 - 26074332
Alignment:
Q  174 gtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||| |||| |||||||| |||||||| ||  | ||||||||| ||||||||||||||    
T  26074395 gtttatgggtcctcttacttataaggtgttcaatctttagttttctatctgatgtgggacatat 26074332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 207
Target Start/End: Original strand, 41635215 - 41635305
Alignment:
Q  117 agcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaac 207  Q
    |||||||  |||||| | |||||  ||||||||||||||||||| ||||| |||||  ||||||| | |||| | |||||| |||||||||    
T  41635215 agcaaccatacaagtaaaagagatactacactcttacctaaaattttaagacaatggatttatggatcctcttatttataaggtgttcaac 41635305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 237
Target Start/End: Original strand, 42405638 - 42405740
Alignment:
Q  135 agagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggaca 234  Q
    |||||| | ||||||||||| |||| ||||||||| |  ||||||| || || | |||| ||| |||||||||||  ||| || |||||||||| |||||    
T  42405638 agagacaccacactcttacccaaaaccttaaggcattaggtttatgagtccttttacttgtaaggtgttcaacctttactattttatccgatgttggaca 42405737  T
Q  235 tat 237  Q
    |||    
T  42405738 tat 42405740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 38427351 - 38427306
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatctta 164  Q
    ||||||||||||  |||||||||| ||||||||||| |||||||||    
T  38427351 caaccgcacaagcaagagagacgccacactcttacccaaaatctta 38427306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 167
Target Start/End: Original strand, 795258 - 795306
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaagg 167  Q
    ||||||||||||  |||||||| | |||||||||||||||| |||||||    
T  795258 caaccgcacaagcaagagagacaccacactcttacctaaaaccttaagg 795306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 220
Target Start/End: Complemental strand, 2828117 - 2828085
Alignment:
Q  188 tcacttataaagtgttcaacctccacttttcta 220  Q
    ||||||||||||||| |||||||||||||||||    
T  2828117 tcacttataaagtgtacaacctccacttttcta 2828085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 156 - 196
Target Start/End: Complemental strand, 34103649 - 34103609
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    |||| |||||||||||||||||||| |||||||| ||||||    
T  34103649 aaaaccttaaggcaatgagtttatgagttctctctcttata 34103609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 196
Target Start/End: Complemental strand, 41340386 - 41340334
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    ||||||||| | |||||||||||||||||||| |||| |||| ||| ||||||    
T  41340386 acactcttatccaaaatcttaaggcaatgagtgtatgagttccctctcttata 41340334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 196
Target Start/End: Complemental strand, 41341558 - 41341510
Alignment:
Q  148 tcttacctaaaatcttaaggcaatgagtttatgggttctctcacttata 196  Q
    ||||||| |||| ||||||||||||||| ||||||||| ||| ||||||    
T  41341558 tcttaccaaaaaccttaaggcaatgagtgtatgggttccctctcttata 41341510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 57; Significance: 6e-24; HSPs: 2)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 5475 - 5371
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | ||||||||| | ||||||||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| ||||||||||||||| |    
T  5475 agagagacaccacactcttatccaaaatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactgttctatccgatgtggaa 5376  T
Q  233 catat 237  Q
    |||||    
T  5375 catat 5371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 112 - 237
Target Start/End: Complemental strand, 5121 - 4996
Alignment:
Q  112 gctatagcaaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctcc 211  Q
    |||| |||||||||| ||| ||||||||| | ||||||||||| |||| | |||||||||||||||||||||  | | ||||||||  | || |||||      
T  5121 gctagagcaaccgcataagcgagagagacaccacactcttacccaaaaccataaggcaatgagtttatgggtctttttacttataagatattaaaccttt 5022  T
Q  212 acttttctatccgatgtgggacatat 237  Q
    ||| |||| ||||||||| |||||||    
T  5021 actgttctctccgatgtgagacatat 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702 (Bit Score: 50; Significance: 9e-20; HSPs: 2)
Name: scaffold0702
Description:

Target: scaffold0702; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 144 - 237
Target Start/End: Original strand, 565 - 658
Alignment:
Q  144 acactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||| |||| |||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || || ||||||||||||||||    
T  565 acactcttacccaaaaccttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactcttttaaccgatgtgggacatat 658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0702; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 234 - 286
Alignment:
Q  185 ctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||| |||||||| |||||||||||  ||| || |||||||||||||||||||    
T  234 ctcttacttataaggtgttcaacctttactattttatccgatgtgggacatat 286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0391
Description:

Target: scaffold0391; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 204
Target Start/End: Original strand, 1730 - 1802
Alignment:
Q  132 gagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttc 204  Q
    ||||||||| | ||||||||||| |||| |||||||||||| |||||||||| ||||||||||||| ||||||    
T  1730 gagagagacaccacactcttaccaaaaaccttaaggcaatgggtttatgggtcctctcacttataaggtgttc 1802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0391; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 133 - 237
Target Start/End: Original strand, 1146 - 1250
Alignment:
Q  133 agagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtggga 232  Q
    |||||||| | | ||||||||| |||| |||||||||||| ||||||| || || |  ||||||| |||||||||||  ||| || ||||| ||||||||    
T  1146 agagagacaccatactcttacccaaaaccttaaggcaatgggtttatgagtcctttttcttataaggtgttcaacctttactcttttatccaatgtggga 1245  T
Q  233 catat 237  Q
    |||||    
T  1246 catat 1250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734 (Bit Score: 44; Significance: 4e-16; HSPs: 2)
Name: scaffold0734
Description:

Target: scaffold0734; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 158 - 237
Target Start/End: Complemental strand, 5870 - 5791
Alignment:
Q  158 aatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    ||||||||||||||| |||||||||| |||| |||||||| |||||||||||  ||| || ||||||||||| |||||||    
T  5870 aatcttaaggcaatgggtttatgggtcctcttacttataaggtgttcaacctttactattttatccgatgtgcgacatat 5791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0734; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 237
Target Start/End: Complemental strand, 5529 - 5410
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatctt-aaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||| ||||||  |||||||| | ||||||||||| |||| ||| ||| ||||  |||||||||  |||| |||||||| |||||||||||  ||| ||    
T  5529 caaccccacaagcaagagagacaccacactcttacccaaaaactttaagacaatatgtttatgggccctcttacttataaggtgttcaacctttactatt 5430  T
Q  218 ctatccgatgtgggacatat 237  Q
     |||||||||| ||||||||    
T  5429 ttatccgatgtaggacatat 5410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0807 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0807
Description:

Target: scaffold0807; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 161 - 220
Target Start/End: Complemental strand, 3168 - 3109
Alignment:
Q  161 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    ||||||||||||||||||| | | ||||||||||||||||||  ||||||||||||||||    
T  3168 cttaaggcaatgagtttattgatgctctcacttataaagtgtataacctccacttttcta 3109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 2)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 186 - 237
Target Start/End: Complemental strand, 39903 - 39852
Alignment:
Q  186 tctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||||||||||||| || ||||| ||||||||||||||||||||||||||||    
T  39903 tctcacttataaagagtccaaccaccacttttctatccgatgtgggacatat 39852  T

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Target: scaffold0113; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 39588 - 39486
Alignment:
Q  119 caaccgcacaagtgagagagacgcta-cactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccactttt 217  Q
    ||||| ||||||  |||||||||| | |||| ||||| |||| ||||||||||   |||||| | | ||||||||||||| | |||||||||||||||||    
T  39588 caaccacacaagcaagagagacgccaacacttttacccaaaa-cttaaggcaacatgtttatagttcctctcacttataaggagttcaacctccactttt 39490  T
Q  218 ctat 221  Q
    ||||    
T  39489 ctat 39486  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 235
Target Start/End: Complemental strand, 47492 - 47376
Alignment:
Q  119 caaccgcacaagtgagagagacgctacactcttacctaaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttc 218  Q
    ||||||| ||||  |||||||| | ||| | ||||| ||||  ||||||||||| |||||||| |||||| |||||||| |||||||| ||  ||| ||     
T  47492 caaccgcgcaagcaagagagacaccacatttttacccaaaactttaaggcaatgggtttatggattctcttacttataaggtgttcaaactttactattt 47393  T
Q  219 tatccgatgtgggacat 235  Q
    |||| |||||| |||||    
T  47392 tatcggatgtgagacat 47376  T

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Target: scaffold0088 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 161 - 220
Target Start/End: Original strand, 10196 - 10255
Alignment:
Q  161 cttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttcta 220  Q
    ||||||||||||||||||| | | || |||||||||||||||  |||||| |||||||||    
T  10196 cttaaggcaatgagtttattgatgctgtcacttataaagtgtataacctctacttttcta 10255  T

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Target: scaffold0171 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 17519 - 17600
Alignment:
Q  156 aaaatcttaaggcaatgagtttatgggttctctcacttataaagtgttcaacctccacttttctatccgatgtgggacatat 237  Q
    |||| |||||||| ||| |||||||||| |||| ||||| || |||||||||||  ||| || |||| |||||| |||||||    
T  17519 aaaaccttaaggctatgggtttatgggtcctcttacttacaaggtgttcaacctttactattttatctgatgtgtgacatat 17600  T

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