View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7709_high_7 (Length: 341)

Name: NF7709_high_7
Description: NF7709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7709_high_7
NF7709_high_7
[»] chr2 (50 HSPs)
chr2 (64-322)||(42089307-42089565)
chr2 (239-320)||(36548272-36548353)
chr2 (238-322)||(9988454-9988538)
chr2 (239-322)||(8170383-8170466)
chr2 (240-321)||(7472629-7472710)
chr2 (241-321)||(32502057-32502137)
chr2 (239-322)||(1944993-1945076)
chr2 (240-322)||(25747837-25747919)
chr2 (240-322)||(31224751-31224833)
chr2 (240-322)||(39141425-39141507)
chr2 (240-322)||(2213577-2213659)
chr2 (236-321)||(2215324-2215409)
chr2 (238-318)||(31562640-31562720)
chr2 (242-322)||(34433263-34433343)
chr2 (238-322)||(36312347-36312431)
chr2 (245-321)||(42515936-42516012)
chr2 (239-322)||(5916196-5916279)
chr2 (239-321)||(23358330-23358411)
chr2 (240-322)||(28127242-28127324)
chr2 (239-321)||(44619015-44619097)
chr2 (240-321)||(2213719-2213800)
chr2 (237-322)||(3853971-3854056)
chr2 (241-322)||(30007509-30007590)
chr2 (230-321)||(7296227-7296318)
chr2 (239-322)||(28261365-28261448)
chr2 (235-321)||(7295298-7295384)
chr2 (240-322)||(26207884-26207966)
chr2 (237-322)||(28641713-28641798)
chr2 (239-322)||(12110945-12111027)
chr2 (243-321)||(14821234-14821312)
chr2 (237-291)||(27911493-27911547)
chr2 (267-321)||(41580692-41580746)
chr2 (267-321)||(45714650-45714704)
chr2 (13-66)||(1987078-1987134)
chr2 (240-321)||(18970245-18970324)
chr2 (267-321)||(23267346-23267400)
chr2 (265-318)||(8041353-8041406)
chr2 (239-322)||(26806210-26806292)
chr2 (240-322)||(3602415-3602497)
chr2 (267-321)||(38600425-38600479)
chr2 (33-70)||(36855841-36855878)
chr2 (238-279)||(43436264-43436305)
chr2 (237-322)||(43858164-43858249)
chr2 (246-318)||(18511177-18511249)
chr2 (239-322)||(30599858-30599941)
chr2 (243-306)||(34997194-34997257)
chr2 (239-322)||(42770351-42770433)
chr2 (267-321)||(16467158-16467212)
chr2 (242-322)||(1763291-1763370)
chr2 (237-321)||(5055241-5055324)
[»] chr1 (47 HSPs)
chr1 (230-321)||(47123473-47123564)
chr1 (237-322)||(10470675-10470760)
chr1 (237-318)||(26058331-26058412)
chr1 (238-321)||(27801608-27801691)
chr1 (239-322)||(42850176-42850259)
chr1 (239-319)||(7826311-7826391)
chr1 (241-321)||(11023289-11023369)
chr1 (239-322)||(1199913-1199996)
chr1 (239-322)||(31223460-31223543)
chr1 (237-322)||(13056083-13056168)
chr1 (234-322)||(5410725-5410813)
chr1 (245-323)||(45710133-45710211)
chr1 (239-321)||(50977297-50977379)
chr1 (237-322)||(12247505-12247590)
chr1 (237-322)||(35569157-35569242)
chr1 (239-322)||(20800234-20800317)
chr1 (239-322)||(43728835-43728918)
chr1 (239-322)||(48510994-48511077)
chr1 (239-321)||(34718538-34718620)
chr1 (236-318)||(35536161-35536243)
chr1 (239-321)||(50406217-50406299)
chr1 (241-322)||(25230092-25230173)
chr1 (239-321)||(6166196-6166278)
chr1 (247-321)||(15576541-15576615)
chr1 (242-317)||(36205282-36205357)
chr1 (267-322)||(43134536-43134591)
chr1 (242-304)||(6061246-6061308)
chr1 (237-321)||(29441271-29441355)
chr1 (237-321)||(40352478-40352561)
chr1 (240-287)||(4369776-4369823)
chr1 (239-322)||(7765241-7765323)
chr1 (238-321)||(12468299-12468381)
chr1 (267-322)||(15884313-15884368)
chr1 (256-322)||(49242956-49243022)
chr1 (237-322)||(13344859-13344943)
chr1 (242-322)||(4347060-4347139)
chr1 (237-321)||(13931709-13931792)
chr1 (245-321)||(40229433-40229509)
chr1 (239-322)||(25061312-25061395)
chr1 (236-306)||(42027-42097)
chr1 (240-321)||(6464694-6464775)
chr1 (258-322)||(34661949-34662012)
chr1 (240-321)||(29438670-29438750)
chr1 (239-279)||(291704-291744)
chr1 (282-322)||(4369803-4369843)
chr1 (282-322)||(23628706-23628746)
chr1 (237-321)||(36447632-36447715)
[»] chr5 (36 HSPs)
chr5 (236-322)||(40885287-40885373)
chr5 (241-321)||(9275439-9275519)
chr5 (241-322)||(13253038-13253119)
chr5 (238-321)||(32454613-32454697)
chr5 (239-321)||(5710339-5710421)
chr5 (234-320)||(24045908-24045994)
chr5 (240-322)||(41834968-41835050)
chr5 (239-322)||(2430250-2430333)
chr5 (239-322)||(22482265-22482348)
chr5 (239-322)||(35760265-35760348)
chr5 (243-321)||(7715017-7715095)
chr5 (236-322)||(10058150-10058236)
chr5 (240-322)||(33953856-33953938)
chr5 (237-321)||(8049002-8049086)
chr5 (237-321)||(32030791-32030875)
chr5 (242-321)||(34106903-34106982)
chr5 (240-322)||(3667930-3668012)
chr5 (239-321)||(39987920-39988002)
chr5 (239-321)||(42146384-42146466)
chr5 (237-321)||(40791021-40791105)
chr5 (239-322)||(7178853-7178936)
chr5 (238-321)||(40495310-40495393)
chr5 (267-321)||(3060205-3060259)
chr5 (239-321)||(16158418-16158500)
chr5 (236-317)||(7385882-7385963)
chr5 (236-321)||(35847840-35847925)
chr5 (257-321)||(41740564-41740628)
chr5 (238-321)||(27021205-27021288)
chr5 (267-314)||(4292233-4292280)
chr5 (238-322)||(19203957-19204040)
chr5 (243-322)||(2694717-2694796)
chr5 (247-322)||(23914215-23914290)
chr5 (237-322)||(3747542-3747627)
chr5 (267-322)||(19784889-19784944)
chr5 (245-322)||(33467951-33468028)
chr5 (13-66)||(41263322-41263375)
[»] chr4 (66 HSPs)
chr4 (239-321)||(48550265-48550347)
chr4 (236-321)||(54150574-54150659)
chr4 (237-321)||(28987066-28987150)
chr4 (239-322)||(46830025-46830108)
chr4 (240-321)||(25312763-25312844)
chr4 (241-322)||(39636832-39636913)
chr4 (237-322)||(43772077-43772162)
chr4 (236-316)||(39187787-39187867)
chr4 (241-321)||(43781477-43781557)
chr4 (238-321)||(9889290-9889373)
chr4 (242-321)||(30842179-30842258)
chr4 (240-322)||(14072549-14072631)
chr4 (234-322)||(51922987-51923075)
chr4 (239-322)||(19592187-19592270)
chr4 (239-322)||(32238015-32238098)
chr4 (240-322)||(6138577-6138659)
chr4 (240-322)||(26651805-26651887)
chr4 (237-322)||(14564100-14564185)
chr4 (234-322)||(13167572-13167660)
chr4 (238-322)||(41866201-41866285)
chr4 (230-321)||(6505249-6505340)
chr4 (236-322)||(16566352-16566438)
chr4 (240-321)||(26426072-26426153)
chr4 (237-322)||(29149261-29149346)
chr4 (240-321)||(48908321-48908402)
chr4 (246-321)||(55638718-55638793)
chr4 (239-321)||(15603408-15603490)
chr4 (239-322)||(49519777-49519863)
chr4 (254-321)||(48407669-48407736)
chr4 (243-322)||(54153091-54153170)
chr4 (243-321)||(9893759-9893837)
chr4 (236-313)||(14076070-14076147)
chr4 (237-322)||(53532024-53532109)
chr4 (236-313)||(54735604-54735681)
chr4 (246-322)||(42944861-42944937)
chr4 (243-322)||(33574225-33574304)
chr4 (13-68)||(47750282-47750337)
chr4 (274-322)||(19599487-19599535)
chr4 (257-321)||(46926096-46926160)
chr4 (239-322)||(40286329-40286411)
chr4 (239-322)||(54488652-54488735)
chr4 (237-287)||(4954020-4954070)
chr4 (240-322)||(31520328-31520410)
chr4 (243-321)||(45779970-45780047)
chr4 (237-287)||(48550396-48550446)
chr4 (242-322)||(22694556-22694636)
chr4 (243-315)||(13183010-13183082)
chr4 (239-298)||(26459852-26459911)
chr4 (239-322)||(38306058-38306141)
chr4 (240-306)||(54655295-54655361)
chr4 (264-321)||(38263947-38264004)
chr4 (233-306)||(48556616-48556689)
chr4 (244-321)||(49136570-49136647)
chr4 (235-304)||(54683453-54683522)
chr4 (234-321)||(4649880-4649967)
chr4 (239-322)||(5025576-5025658)
chr4 (33-68)||(10089817-10089852)
chr4 (240-314)||(5835805-5835878)
chr4 (280-322)||(15619661-15619703)
chr4 (280-322)||(53914945-53914987)
chr4 (238-279)||(2175132-2175173)
chr4 (242-322)||(28947708-28947788)
chr4 (242-287)||(46958090-46958135)
chr4 (239-287)||(3652743-3652791)
chr4 (239-287)||(36150671-36150719)
chr4 (293-321)||(56241845-56241873)
[»] chr7 (45 HSPs)
chr7 (237-322)||(37562653-37562738)
chr7 (240-321)||(41715741-41715822)
chr7 (237-322)||(3622401-3622486)
chr7 (242-321)||(47217487-47217566)
chr7 (239-322)||(34010422-34010504)
chr7 (242-321)||(43631642-43631721)
chr7 (243-322)||(46541683-46541762)
chr7 (240-322)||(3342873-3342955)
chr7 (239-321)||(32187024-32187106)
chr7 (238-318)||(37639517-37639597)
chr7 (242-321)||(39391083-39391162)
chr7 (239-322)||(48459793-48459876)
chr7 (241-322)||(38230151-38230232)
chr7 (238-322)||(10371900-10371984)
chr7 (240-319)||(19097483-19097562)
chr7 (238-321)||(39977636-39977719)
chr7 (242-317)||(48134667-48134742)
chr7 (243-316)||(386428-386501)
chr7 (246-322)||(44967349-44967425)
chr7 (242-322)||(47022002-47022082)
chr7 (244-321)||(12632031-12632108)
chr7 (237-313)||(34010902-34010978)
chr7 (238-322)||(34365924-34366008)
chr7 (238-321)||(3375574-3375657)
chr7 (239-322)||(24770854-24770937)
chr7 (238-321)||(43737881-43737964)
chr7 (240-322)||(40903112-40903194)
chr7 (237-322)||(39634106-39634191)
chr7 (237-322)||(42752132-42752217)
chr7 (241-321)||(9456188-9456268)
chr7 (233-321)||(42904637-42904725)
chr7 (231-322)||(2839373-2839464)
chr7 (263-322)||(12964681-12964740)
chr7 (237-314)||(43186537-43186613)
chr7 (241-321)||(36920123-36920203)
chr7 (271-322)||(3750769-3750820)
chr7 (239-321)||(37008296-37008376)
chr7 (242-322)||(20088952-20089032)
chr7 (267-317)||(12212440-12212490)
chr7 (276-322)||(42740475-42740521)
chr7 (25-66)||(22191182-22191223)
chr7 (267-308)||(25472152-25472193)
chr7 (242-287)||(38494319-38494364)
chr7 (240-280)||(4022268-4022308)
chr7 (32-68)||(21654816-21654852)
[»] chr3 (47 HSPs)
chr3 (237-322)||(50664820-50664905)
chr3 (239-322)||(48189398-48189481)
chr3 (238-321)||(42475772-42475855)
chr3 (235-322)||(44939368-44939455)
chr3 (239-320)||(38172263-38172344)
chr3 (238-318)||(52966764-52966844)
chr3 (235-322)||(10334200-10334287)
chr3 (239-322)||(55154563-55154646)
chr3 (240-321)||(10853224-10853305)
chr3 (237-322)||(23496379-23496464)
chr3 (240-321)||(42318392-42318473)
chr3 (238-322)||(3348305-3348389)
chr3 (238-322)||(30811487-30811571)
chr3 (234-321)||(4984644-4984731)
chr3 (239-322)||(15511332-15511415)
chr3 (255-322)||(35425395-35425462)
chr3 (240-322)||(26519726-26519808)
chr3 (239-317)||(38125398-38125476)
chr3 (234-321)||(21225053-21225140)
chr3 (240-321)||(53074965-53075046)
chr3 (257-321)||(35930801-35930865)
chr3 (237-321)||(52813278-52813362)
chr3 (243-322)||(19877479-19877558)
chr3 (236-321)||(16246049-16246132)
chr3 (240-322)||(38340867-38340949)
chr3 (241-322)||(34561170-34561251)
chr3 (242-322)||(8424689-8424769)
chr3 (239-322)||(20813208-20813290)
chr3 (237-287)||(31084289-31084339)
chr3 (239-321)||(44224825-44224907)
chr3 (237-322)||(40415250-40415335)
chr3 (267-322)||(14651086-14651141)
chr3 (242-321)||(25181273-25181351)
chr3 (271-321)||(29716674-29716724)
chr3 (256-321)||(23207041-23207106)
chr3 (239-291)||(31618368-31618420)
chr3 (242-322)||(45423728-45423808)
chr3 (242-318)||(49526628-49526704)
chr3 (274-321)||(53179911-53179958)
chr3 (280-322)||(31084269-31084311)
chr3 (239-321)||(44225628-44225709)
chr3 (264-322)||(53567994-53568051)
chr3 (241-306)||(5045970-5046035)
chr3 (293-322)||(30301199-30301228)
chr3 (13-66)||(41890497-41890549)
chr3 (13-66)||(42601724-42601776)
chr3 (33-65)||(33748658-33748690)
[»] chr8 (52 HSPs)
chr8 (239-322)||(3467603-3467686)
chr8 (237-322)||(22936747-22936832)
chr8 (237-322)||(38114514-38114599)
chr8 (235-308)||(29023307-29023380)
chr8 (241-322)||(41289016-41289097)
chr8 (241-321)||(4941739-4941819)
chr8 (237-321)||(28425426-28425510)
chr8 (240-322)||(25697917-25697999)
chr8 (236-322)||(30759258-30759344)
chr8 (240-322)||(36121502-36121584)
chr8 (241-318)||(27649819-27649896)
chr8 (241-321)||(36113999-36114079)
chr8 (239-321)||(3097162-3097244)
chr8 (240-318)||(30085596-30085674)
chr8 (237-322)||(440143-440228)
chr8 (237-322)||(33626988-33627073)
chr8 (239-308)||(44926939-44927008)
chr8 (242-322)||(24897547-24897627)
chr8 (242-321)||(26243195-26243274)
chr8 (242-321)||(42143323-42143402)
chr8 (239-322)||(25497761-25497845)
chr8 (239-321)||(3465396-3465478)
chr8 (239-309)||(26125840-26125910)
chr8 (267-321)||(40742279-40742333)
chr8 (267-321)||(44926911-44926965)
chr8 (238-322)||(15206766-15206850)
chr8 (243-322)||(36779461-36779539)
chr8 (239-321)||(6399064-6399146)
chr8 (263-316)||(6876603-6876656)
chr8 (241-322)||(31246273-31246354)
chr8 (240-321)||(35550292-35550372)
chr8 (249-321)||(30081617-30081689)
chr8 (13-68)||(30470876-30470931)
chr8 (263-322)||(40792184-40792243)
chr8 (240-322)||(3619026-3619108)
chr8 (241-323)||(6065357-6065439)
chr8 (242-324)||(32597863-32597945)
chr8 (280-322)||(40742194-40742236)
chr8 (13-66)||(26632211-26632264)
chr8 (245-306)||(38152137-38152198)
chr8 (240-291)||(35615810-35615861)
chr8 (237-284)||(45147219-45147266)
chr8 (267-321)||(8125041-8125095)
chr8 (236-306)||(8702361-8702431)
chr8 (240-322)||(26491003-26491085)
chr8 (33-63)||(26749476-26749506)
chr8 (13-42)||(8610039-8610068)
chr8 (241-278)||(14520263-14520300)
chr8 (32-68)||(5212260-5212296)
chr8 (32-68)||(5735256-5735292)
chr8 (238-322)||(24297547-24297631)
chr8 (239-287)||(39219811-39219859)
[»] chr6 (22 HSPs)
chr6 (239-321)||(13739268-13739350)
chr6 (239-321)||(13744768-13744850)
chr6 (238-321)||(33898960-33899043)
chr6 (236-321)||(29409204-29409289)
chr6 (239-322)||(6208019-6208102)
chr6 (239-322)||(32599418-32599501)
chr6 (240-322)||(10826153-10826235)
chr6 (236-322)||(21254832-21254918)
chr6 (242-322)||(17829957-17830037)
chr6 (239-322)||(1312395-1312478)
chr6 (237-321)||(5584003-5584087)
chr6 (240-307)||(29399750-29399817)
chr6 (239-321)||(15151461-15151543)
chr6 (241-322)||(31132525-31132606)
chr6 (239-322)||(3605708-3605790)
chr6 (237-322)||(26274581-26274666)
chr6 (242-306)||(699634-699698)
chr6 (242-318)||(16121960-16122036)
chr6 (242-292)||(16442324-16442374)
chr6 (237-322)||(8551047-8551131)
chr6 (237-322)||(21455942-21456027)
chr6 (243-283)||(32457404-32457444)
[»] scaffold0381 (1 HSPs)
scaffold0381 (238-321)||(9173-9256)
[»] scaffold0005 (1 HSPs)
scaffold0005 (237-322)||(253190-253275)
[»] scaffold0217 (1 HSPs)
scaffold0217 (230-321)||(1974-2065)
[»] scaffold0983 (1 HSPs)
scaffold0983 (240-321)||(2225-2306)
[»] scaffold0394 (1 HSPs)
scaffold0394 (237-322)||(5784-5869)
[»] scaffold0369 (1 HSPs)
scaffold0369 (239-321)||(8512-8594)
[»] scaffold0007 (1 HSPs)
scaffold0007 (240-322)||(29080-29162)
[»] scaffold0172 (1 HSPs)
scaffold0172 (238-322)||(15213-15296)
[»] scaffold0041 (1 HSPs)
scaffold0041 (240-322)||(46824-46906)
[»] scaffold0014 (1 HSPs)
scaffold0014 (239-321)||(118366-118448)
[»] scaffold0100 (1 HSPs)
scaffold0100 (13-65)||(30596-30648)


Alignment Details
Target: chr2 (Bit Score: 235; Significance: 1e-130; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 64 - 322
Target Start/End: Original strand, 42089307 - 42089565
Alignment:
Q  64 tctaaagctccatatctgattgtctctctcctatgtggtcatctttctgtttcactctgggggagagggagtgggagtggaataggtagataaaacacga 163  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42089307 tctaaagctccatatctggttgtctctctcctatgtggtcatctttctgtttcactctgggggagagggagtgggagtggaataggtagataaaacacga 42089406  T
Q  164 aaaagagaaagagaaattgaaggaatgaagaaaattgacatatgattgacacatgactcacttaacatttgttttagtgtgtgtttggtttggcggtggc 263  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||      
T  42089407 aaaagagaaagagaaattgaaggaatgaagaaaattgacatatgattgacacatgactcacttaacatttgttttagtgtgtgtttgatttggcggtgat 42089506  T
Q  264 gaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||    
T  42089507 gaaaattgattttgatagaattaagttcaagagaattgattttgattaaaagtgagttg 42089565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 239 - 320
Target Start/End: Complemental strand, 36548353 - 36548272
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagt 320  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  36548353 agtgtgtgtttggtatggcggtggtgaaaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagt 36548272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 9988454 - 9988538
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  9988454 tagtgtgtgtttggtttggcggtggggagaattgattttgatagaattgagtttgagagaattgatttttgttaaaagtgagttg 9988538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 8170466 - 8170383
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||  ||||||||||| |||| |||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  8170466 agtgtgtgtttggtagggcggtggcgagaattaattttgatagaattgagtttgagagaattgattttgattaaaagtgagttg 8170383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 7472629 - 7472710
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  7472629 gtgtgtgtttggtatgacggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 7472710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 32502137 - 32502057
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||| ||||||| | |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  32502137 tgtgtgtttggtatggcggtcgtgaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 32502057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 1944993 - 1945076
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||| || || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  1944993 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 1945076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 25747837 - 25747919
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||  ||||||| || |||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  25747837 gtgtgtgtttggttccgcggtggtgataattgagtttgatagaattgagtttgagagaattgattttgattaaaagtgagttg 25747919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 31224833 - 31224751
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||| ||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||  ||||||||||||||    
T  31224833 gtgtgtatttggtttggcggtgacgaaaattgattttgatagaattgagtttgaaagaattgattttagttaaaagtgagttg 31224751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 39141425 - 39141507
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| ||||||||||| |||||||||||||| |||||||||| | ||||||||||||| ||||||||||||||    
T  39141425 gtgtgtgtttggttgggcggtggcgagaattgattttgatataattgagtttgaaagaattgattttggttaaaagtgagttg 39141507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 2213659 - 2213577
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| | ||||||| || ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  2213659 gtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttg 2213577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 236 - 321
Target Start/End: Complemental strand, 2215409 - 2215324
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||| | ||||| | || |||||||||||||||||||||| || ||||||||||||||| |||||||||||||    
T  2215409 tttagtgtgtgtttggtatagcggttgtgagaattgattttgatagaattgagcttgagagaattgattttggttaaaagtgagtt 2215324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 31562640 - 31562720
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    ||||| ||||||||| ||| |||||||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||    
T  31562640 tagtgcgtgtttggtatggtggtggcgagaattgattttgataaaattgagtttgagagaattgattttggttaaaagtga 31562720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 34433263 - 34433343
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||  ||||||  || ||||||||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  34433263 gtgtgtttggttcagcggtgaagagaattgattttgatagaattgagtttgacagaattgattttgattaaaagtgagttg 34433343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 36312431 - 36312347
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||| |||||| || || ||||||||||||||||||| | ||| ||||||||||||||| ||||||||||||||    
T  36312431 tagtgtgtgtttggtatggcggcggggagaattgattttgatagaattaattttgagagaattgattttggttaaaagtgagttg 36312347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 42515936 - 42516012
Alignment:
Q  245 tgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||||||  |||||||||||||    
T  42515936 tgtttggtatggcggtggagaaaattgattttgatataattgagtttgagagaattgattttagttaaaagtgagtt 42516012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 5916196 - 5916279
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||| || || ||||||||||||||||||| | ||| ||||||||||||||| ||||||||||||||    
T  5916196 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattaattttgagagaattgattttggttaaaagtgagttg 5916279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 23358411 - 23358330
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| ||| | |||||| |||||||||  |||||||||||||| |||||||||||||||||||||||||||||    
T  23358411 agtgtgtgtttggtatggtgttggcgagaattgattta-atagaattgagtttgagagaattgattttgattaaaagtgagtt 23358330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 28127242 - 28127324
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| | ||||||| || ||||||||||||||||||| ||||| ||||||||||||||| | ||||||||||||    
T  28127242 gtgtgtgtttggtatagcggtggggagaattgattttgatagaatttagtttgagagaattgattttgctaaaaagtgagttg 28127324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 44619015 - 44619097
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||| | |  || |||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  44619015 agtgtgtgtttgatataccgatggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 44619097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 2213800 - 2213719
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||| |||| |  | || ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  2213800 gtgtgtgtttggtatggcagatgagagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 2213719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 3854056 - 3853971
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||  ||||| |||| |||||| |||||| ||||||| ||| | ||||||||||||||||||||||||||||    
T  3854056 ttagtgtgtgtttggttgtgcggtagcgagaattgagtttgatggaattgattttgatagaattgattttgattaaaagtgagttg 3853971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 30007509 - 30007590
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| |||| |||| |||| || ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  30007509 tgtgtgtatggtatggctgtggggagaattgattttgatagaattgagtttgagagaattaattttggttaaaagtgagttg 30007590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 230 - 321
Target Start/End: Complemental strand, 7296318 - 7296227
Alignment:
Q  230 atttgttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| ||||||||||||||||| |||| || | ||| |||||| ||||||| |||||||||| ||||||||||||||| |||||| ||||||    
T  7296318 atttattttagtgtgtgtttggattggtggcgccgataattgactttgatataattgagtttgagagaattgattttggttaaaaatgagtt 7296227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 28261448 - 28261365
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| | |||||||| || |||| ||||| ||| |||||||||| ||||||||||||||| ||||||||||||||    
T  28261448 agtgtgtgtttgggtgggcggtggagagaattaattttaatacaattgagtttgagagaattgattttgcttaaaagtgagttg 28261365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 235 - 321
Target Start/End: Original strand, 7295298 - 7295384
Alignment:
Q  235 ttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||| ||| ||| | ||| |||| |||||||||||||||||||| |||||||||||| || |||||| ||||||    
T  7295298 ttttagtgtgtgtttggattgacggcgtcgataattaattttgatagaattgagtttgagagaattgattctggttaaaaatgagtt 7295384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 26207884 - 26207966
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| || ||||| ||||||||||||||||||||||| | ||| ||||||||| ||||| |||||||| |||||    
T  26207884 gtgtgtgtttggtatgacggtgacgaaaattgattttgatagaattaattttgagagaattggttttggttaaaagtcagttg 26207966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 28641798 - 28641713
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||||||| |||  |||||||||||| || ||||||| | | ||||||||||||||| ||||| ||||||||    
T  28641798 ttagtgtgtgtttggtttggcgatggataaaattgattttaattgaattgattctgagagaattgattttggttaaatgtgagttg 28641713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 12111027 - 12110945
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  |||||| ||||||||||||||||||||||||| |||   | ||||||||||| ||||||||||||||    
T  12111027 agtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttgtca-aattgattttggttaaaagtgagttg 12110945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 14821312 - 14821234
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||| | |||||| ||| |||| |||||||||||||||||||| || |||||||||||  |||||||||||||    
T  14821312 tgtgtttggtatagcggtgacgataattaattttgatagaattgagtttgagtgaattgattttagttaaaagtgagtt 14821234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 237 - 291
Target Start/End: Complemental strand, 27911547 - 27911493
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagttt 291  Q
    ||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||    
T  27911547 ttagtgtgtgtttggttcggcggcggcgataattgattttgatagaattgagttt 27911493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 41580692 - 41580746
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  41580692 aattgattttgatcgaattgagtttgagagaattgattttggttaaaagtgagtt 41580746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 45714650 - 45714704
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| |||||||||| |||||||||||||||||||||| ||||||    
T  45714650 aattgattttgatataattgagtttgagagaattgattttgattaaaaatgagtt 45714704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 1987134 - 1987078
Alignment:
Q  13 tgaaaaagtgaatgttgaatggtgttgaatgg---tataaaccattggagatggtct 66  Q
    |||||||||||||||||||| |||||||||||   ||||||||||||||||||||||    
T  1987134 tgaaaaagtgaatgttgaatagtgttgaatggtaatataaaccattggagatggtct 1987078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 18970245 - 18970324
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||| | |||  | |||||||||||||||||||||||   |||| ||||||||||| |||||||||||||    
T  18970245 gtgtgtgtttggtttgactgtgatggaaattgattttgatagaattgag--gaagataattgattttggttaaaagtgagtt 18970324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 23267346 - 23267400
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||||||||||| || |||||||||||| ||| |||||||||    
T  23267346 aattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagtt 23267400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 318
Target Start/End: Complemental strand, 8041406 - 8041353
Alignment:
Q  265 aaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    |||||||  |||||||||||||||||| |||||||||||||||| |||||||||    
T  8041406 aaaattgtgtttgatagaattgagtttgagagaattgattttgaataaaagtga 8041353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 26806210 - 26806292
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  |||||| | | ||||||||||| | ||||| | ||||  ||||||||||||||||||||||||||||    
T  26806210 agtgtgtgtttggttacgcggtgacaataattgattttggttgaattaattttac-agaattgattttgattaaaagtgagttg 26806292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 3602415 - 3602497
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||  ||||||  ||||||||||||| |  ||||||| ||| | |||||||||||||  |||||||||||||    
T  3602415 gtgtgtgtttggttctgcggtgatgaaaattgatttttactgaattgattttgatagaattgattttgtctaaaagtgagttg 3602497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 38600425 - 38600479
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| |||||||| ||||| ||||| ||||||||||||||| |||||||||||||    
T  38600425 aattaattttgatcgaattaagtttgagagaattgattttggttaaaagtgagtt 38600479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 33 - 70
Target Start/End: Original strand, 36855841 - 36855878
Alignment:
Q  33 ggtgttgaatggtataaaccattggagatggtctaaag 70  Q
    |||||| |||||||||||||||||||||||||||||||    
T  36855841 ggtgttaaatggtataaaccattggagatggtctaaag 36855878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 43436264 - 43436305
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgat 279  Q
    ||||||||||||||| |||||||||||| |||||||||||||    
T  43436264 tagtgtgtgtttggtatggcggtggcgagaattgattttgat 43436305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 43858164 - 43858249
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| ||||| |||  |||||||  | ||||||||||||||||||||| |||||  ||||||||||||   ||||||||||||    
T  43858164 ttagtgtatgtttagttatgcggtgggtataattgattttgatagaattgattttaattgaattgattttgggcaaaagtgagttg 43858249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 18511249 - 18511177
Alignment:
Q  246 gtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    ||||||||  ||||||| || |||||||||||||| |||||| ||| | | ||||||||||| ||||||||||    
T  18511249 gtttggttcagcggtggagagaattgattttgataaaattgattttgatataattgattttggttaaaagtga 18511177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 30599858 - 30599941
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||| ||||||||||||||||||  | |||||||| | | | |||| | ||| | ||||||||||||| ||||||||||||||    
T  30599858 agtgtatgtttggtttggcggtggttagaattgattctaacaaaattaattttgatagaattgattttggttaaaagtgagttg 30599941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 243 - 306
Target Start/End: Original strand, 34997194 - 34997257
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatttt 306  Q
    ||||||||||||||| | || ||||||||||||||||| |||| ||||| | | ||||||||||    
T  34997194 tgtgtttggtttggctgcggtgaaaattgattttgataaaatttagtttgacaaaattgatttt 34997257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 42770351 - 42770433
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||| ||||||| | | ||||||||| | | ||||||| ||| | | |||| |||||||||||||||||||||    
T  42770351 agtgtgtgtttggttaggcggtgacaataattgatttcggttgaattga-ttttacataattcattttgattaaaagtgagttg 42770433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 16467212 - 16467158
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||||||| |||   | ||||||||||| |||||||||||||    
T  16467212 aattgattttgatagaattgattttggcataattgattttggttaaaagtgagtt 16467158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 1763370 - 1763291
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||  |||||| ||| |||||||||||||| |||||| |||   | ||||||||||| |||||| |||||||    
T  1763370 gtgtgtttggttgtgcggtgacgagaattgattttgataaaattga-ttttgtaaaattgattttggttaaaattgagttg 1763291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 5055324 - 5055241
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| ||||||||| ||  |||||||| ||| ||||||||||| ||||| | |||   ||||||||||||| |||||||||||||    
T  5055324 ttagcgtgtgtttgattacgcggtggcaaaatttgattttgattgaattaattttgc-agaattgattttggttaaaagtgagtt 5055241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 80; Significance: 2e-37; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 230 - 321
Target Start/End: Complemental strand, 47123564 - 47123473
Alignment:
Q  230 atttgttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47123564 atttgttttagtgtgtgtttggtatggcggtggcaaaaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt 47123473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 10470760 - 10470675
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  10470760 ttagtgtgtgtttggtagggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttg 10470675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 237 - 318
Target Start/End: Complemental strand, 26058412 - 26058331
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26058412 ttagtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtga 26058331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 27801608 - 27801691
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||| || ||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  27801608 tagtgtgtgtttggtatgacggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagtt 27801691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 42850176 - 42850259
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  42850176 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttaagtgaattgattttggttaaaagtgagttg 42850259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 239 - 319
Target Start/End: Original strand, 7826311 - 7826391
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgag 319  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||| ||| ||||||||||||||| |||||||||||    
T  7826311 agtgtgtgtttggtttggcggtggagaaaattgattttgatagaattgattttgagagaattgattttggttaaaagtgag 7826391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 11023289 - 11023369
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  11023289 tgtgtgtttggtatggcggtggtgaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 11023369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 1199996 - 1199913
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  1199996 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattaattttggttaaaagtgagttg 1199913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 31223543 - 31223460
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||||    
T  31223543 agtgtgtgtttggtttggcggtggggagaattgattttaatagaattgagtttgagagaattgattttggttaaaagtgagttg 31223460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 13056168 - 13056083
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||| |||||||||||| |||||||||||||||||| |||||| | ||||||||||||| ||||||||||||||    
T  13056168 ttagtgtgtgtttggtatggcggtggcgataattgattttgatagaatggagtttgaaagaattgattttggttaaaagtgagttg 13056083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 322
Target Start/End: Complemental strand, 5410813 - 5410725
Alignment:
Q  234 gttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||| ||||||||||||||||||| ||||| |||||||||||||| |||||| ||| | ||||||||||||||||||||||||||||    
T  5410813 gttttaatgtgtgtttggtttggcggcggcgagaattgattttgatataattgaatttgaaagaattgattttgattaaaagtgagttg 5410725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 245 - 323
Target Start/End: Complemental strand, 45710211 - 45710133
Alignment:
Q  245 tgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttgt 323  Q
    |||||||| | |||||||||| ||||||||||||||||||||||||| || ||||||||||||||||||||||||||||    
T  45710211 tgtttggtatagcggtggcgataattgattttgatagaattgagtttgagtgaattgattttgattaaaagtgagttgt 45710133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 50977297 - 50977379
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| |||||| | ||||||||||||| |||||||||||||    
T  50977297 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaatggagtttgaaagaattgattttggttaaaagtgagtt 50977379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 12247590 - 12247505
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||| | ||||||  ||||||||||||| ||||||||||||||||||||||||||| || ||||||||||||||    
T  12247590 ttagtgtgtgtttggtatagcggtgatgaaaattgattttaatagaattgagtttaagagaattgattctggttaaaagtgagttg 12247505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 35569157 - 35569242
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||| |||||| || || ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  35569157 ttagtgtgtgtttggtatggcggcggggagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttg 35569242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 20800234 - 20800317
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||| || || ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  20800234 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttg 20800317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 43728835 - 43728918
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| | ||| ||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  43728835 agtgtgtgtttggtatagcgatggagagaattgattttgatagaattgagtttgagagaattgattttgcttaaaagtgagttg 43728918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 48511077 - 48510994
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||| ||||| ||||||||||||| ||||||||||| ||| ||||||||||| ||||||||||||||    
T  48511077 agtgtgtgtttggtatggcggcggcgagaattgattttgattgaattgagtttgagataattgattttggttaaaagtgagttg 48510994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 34718620 - 34718538
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||| ||||||  ||||||||||||||||||||||||||| ||| |||| |||||| |||||||||||||    
T  34718620 agtgtgtgtttggtttgacggtggaaaaaattgattttgatagaattgagtttgagataattaattttggttaaaagtgagtt 34718538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 318
Target Start/End: Complemental strand, 35536243 - 35536161
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    ||||||||||||||||| ||||||||  ||||||| ||||| |||||||||||||| |||||||| |||||||||||||||||    
T  35536243 tttagtgtgtgtttggtatggcggtgatgaaaattaattttaatagaattgagtttgagagaattaattttgattaaaagtga 35536161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 50406299 - 50406217
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| | |||||||||| |||||||||||||| |||||||||| | ||| |||||||||||||||||||||||    
T  50406299 agtgtgtgtttggtatagcggtggcgagaattgattttgataaaattgagtttgaaagatttgattttgattaaaagtgagtt 50406217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 25230173 - 25230092
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||| || ||||||||| ||||||||||||||||| ||||||| ||||||||||||||  ||||||||||||||    
T  25230173 tgtgtgtttggtatgacggtggcgagaattgattttgatagaactgagtttgagagaattgattttagttaaaagtgagttg 25230092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 6166278 - 6166196
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| | ||||||| || ||||||||||||||||||||| ||| ||||||||||||||| ||| |||||||||    
T  6166278 agtgtgtgtttggtatcgcggtggtgagaattgattttgatagaattgaatttgagagaattgattttggttagaagtgagtt 6166196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 247 - 321
Target Start/End: Complemental strand, 15576615 - 15576541
Alignment:
Q  247 tttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| |||||||||| |||||||||||||| ||  ||||||||||||||||||||||||| ||||||||||||||    
T  15576615 tttgatttggcggtgacgaaaattgattttaattaaattgagtttaagagaattgattttaattaaaagtgagtt 15576541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 36205357 - 36205282
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtg 317  Q
    ||||||||||| || |||||| || |||||||||| |  ||||||||||| |||||||||||||||||||||||||    
T  36205357 gtgtgtttggtatgacggtggtgagaattgattttaacggaattgagtttgagagaattgattttgattaaaagtg 36205282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 43134591 - 43134536
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||| |||| ||||||||||||||||||||||||||||||| ||||||||||||||    
T  43134591 aatttatttggatagaattgagtttaagagaattgattttggttaaaagtgagttg 43134536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 242 - 304
Target Start/End: Complemental strand, 6061308 - 6061246
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatt 304  Q
    |||||||||||||| |||||| |||||||||||||||||||||||| ||| ||| ||||||||    
T  6061308 gtgtgtttggtttgacggtggtgaaaattgattttgatagaattgaatttgagataattgatt 6061246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 29441355 - 29441271
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| ||  ||||||   | ||||||||||||||||||||||||| || |||||||||||| ||| |||||||||    
T  29441355 ttagtgtgtgtttgattctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagtt 29441271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 40352561 - 40352478
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||||  ||||||  || ||||||||||||||||||||| |||  | |||||||||||| |||||||||||||    
T  40352561 ttagtgtgtgtttggttgtgcggtgaggagaattgattttgatagaattgattttgtg-gaattgattttggttaaaagtgagtt 40352478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 287
Target Start/End: Original strand, 4369776 - 4369823
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattga 287  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  4369776 gtgtgtgtttggtttggcggtggagaaaattgattttgagagaattga 4369823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 7765241 - 7765323
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  |||||| ||| ||||||||||||||||||||| ||| | | |||||||| ||| |||||||||||||    
T  7765241 agtgtgtgtttggttatgcggtgacgagaattgattttgatagaattga-ttttacataattgattatgaataaaagtgagttg 7765323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 12468381 - 12468299
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||| |||||| ||  | ||||||||| ||||||||||||||| | | ||||||||||| |||||||||||||    
T  12468381 tagtgtgtgtttggtatggcggcgggaagaattgattt-gatagaattgagtttgatataattgattttggttaaaagtgagtt 12468299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 15884368 - 15884313
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||| |||||||| | ||||||||||||| ||||||||||||||    
T  15884368 aattgattttgatagagttgagtttgacagaattgattttggttaaaagtgagttg 15884313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 256 - 322
Target Start/End: Original strand, 49242956 - 49243022
Alignment:
Q  256 gcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| || |||| ||||||||| |||||||||| ||||||||||||||| |||||| |||||||    
T  49242956 gcggtggtgagaattaattttgatataattgagtttgagagaattgattttggttaaaaatgagttg 49243022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 13344943 - 13344859
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||| |||||||||||| |||||||  || ||||||||||||| ||||||| |||   ||||||||||||| ||||||||||||||    
T  13344943 ttagcgtgtgtttggttgggcggtgaagataattgattttgattgaattga-ttttgtagaattgattttggttaaaagtgagttg 13344859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 4347139 - 4347060
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||  |||||||  ||||||||||||| ||||||||| |||   ||||||||||||| ||||||||||||||    
T  4347139 gtgtgtttggttgtgcggtggaaaaaattgattttggtagaattga-ttttgtagaattgattttggttaaaagtgagttg 4347060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 13931792 - 13931709
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||| ||||||||| |  | |||||||||||||||||||||||   | ||||||||||| |||||| ||||||    
T  13931792 ttagtgtgtgtttggtatggcggtggtggga-ttgattttgatagaattgagtttccaaaaattgattttgtttaaaaatgagtt 13931709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 245 - 321
Target Start/End: Original strand, 40229433 - 40229509
Alignment:
Q  245 tgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||| || |||||  |||||||||||||||||||||||| |||    |||||||||||| |||||||||||||    
T  40229433 tgtttggtatgacggtgatgaaaattgattttgatagaattgattttgttggaattgattttggttaaaagtgagtt 40229509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 25061395 - 25061312
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  |||||| | ||||||||||||| || |||||| |||    |||||||||||| ||||||||||||||    
T  25061395 agtgtgtgtttggttctgcggtgacaaaaattgattttgttaaaattgattttggttgaattgattttggttaaaagtgagttg 25061312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 306
Target Start/End: Complemental strand, 42097 - 42027
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatttt 306  Q
    ||||||||||||||| ||  ||||||| ||||||||||||||||| |||||| |||   ||||||||||||    
T  42097 tttagtgtgtgtttgattctgcggtggagaaaattgattttgataaaattgattttgttagaattgatttt 42027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 6464775 - 6464694
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| |||||||| | | |||| ||| |||||||||||||| |||||||||| || || || |||||| |||||||||||||    
T  6464775 gtgtttgtttggtatagtggtgacgagaattgattttgatataattgagtttgagtgagttcattttggttaaaagtgagtt 6464694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 258 - 322
Target Start/End: Complemental strand, 34662012 - 34661949
Alignment:
Q  258 ggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||| ||||||| | ||||||| |||||||||| |||||||||| ||||||||||| |||||||    
T  34662012 ggtggtgaaaattaagtttgataaaattgagtttgagagaattga-tttgattaaaaatgagttg 34661949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 29438750 - 29438670
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||  || ||||||| || |||||||| ||||| |||||| |||   ||||||||||||||| |||||||||||    
T  29438750 gtgtgtgtttgaatttgcggtggagagaattgattctgataaaattgattttgc-agaattgattttgatgaaaagtgagtt 29438670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 279
Target Start/End: Original strand, 291704 - 291744
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgat 279  Q
    |||||||||||||| ||| |||||||| |||||||||||||    
T  291704 agtgtgtgtttggtatggtggtggcgagaattgattttgat 291744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 4369803 - 4369843
Alignment:
Q  282 aattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||| ||| ||||||||||||||| ||||||||||||||    
T  4369803 aattgattttgagagaattgattttggttaaaagtgagttg 4369843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 322
Target Start/End: Original strand, 23628706 - 23628746
Alignment:
Q  282 aattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||| ||| |||||||||||| |||||||||||||    
T  23628706 aattgagtttgagataattgattttgactaaaagtgagttg 23628746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 36447632 - 36447715
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| ||||||||||||  | || || |||||||||||||||| ||||| | |||   ||||||||||||||| |||||||||||    
T  36447632 ttagcgtgtgtttggttctgtggcggtgaaaattgattttgattgaattaattttgt-agaattgattttgatcaaaagtgagtt 36447715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 75; Significance: 2e-34; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 236 - 322
Target Start/End: Complemental strand, 40885373 - 40885287
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  40885373 tttagtgtgtgtttggtatggcggtggtgaaaattgattttgttagaattgagtttaagagaattgattttgattaaaagtgagttg 40885287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 9275439 - 9275519
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  9275439 tgtgtgtttggtttggcggtggggaaaattgattttgataaaattgagtttaagagaattgattttggttaaaagtgagtt 9275519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 13253038 - 13253119
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  13253038 tgtgtgtttggttgggcggtggcgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtgagttg 13253119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 32454697 - 32454613
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgat-agaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||| |||||||||||| ||||||||||||| |||||||||||| ||||||||||||||| |||||||||||||    
T  32454697 tagtgtgtgtttggtatggcggtggcgagaattgattttgattagaattgagtttgagagaattgattttggttaaaagtgagtt 32454613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 5710339 - 5710421
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| |||||||||||| |||||||||||||||||| |||||| | ||||||||||||| |||||||||||||    
T  5710339 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaatggagtttgaaagaattgattttggttaaaagtgagtt 5710421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 234 - 320
Target Start/End: Complemental strand, 24045994 - 24045908
Alignment:
Q  234 gttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagt 320  Q
    |||||||| |||||||||| ||||||||| || ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||    
T  24045994 gttttagtatgtgtttggtatggcggtggtgagaattgattttgatagaattgaatttgagagaattgattttggttaaaagtgagt 24045908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 41835050 - 41834968
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  41835050 gtgtgtgtttggtatggcggtggggagaattgattttgatagaattcagtttgagagaattgattttggttaaaagtgagttg 41834968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 2430250 - 2430333
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| |||||| |||||||||||| |||| |||||||| ||||||||||| ||||||||||||||| ||||||||||||||    
T  2430250 agtgtgtatttggtatggcggtggcgagaattcattttgatggaattgagtttgagagaattgattttggttaaaagtgagttg 2430333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 22482348 - 22482265
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||| || || ||||||||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  22482348 agtgtgtgtttggtatggcggcggggagaattgattttgatagaattgattttgagagaattgattttggttaaaagtgagttg 22482265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 35760348 - 35760265
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| | ||||||| || ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  35760348 agtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttg 35760265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 7715095 - 7715017
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||| || |||||||||  ||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  7715095 tgtgttttgtatggcggtggtaaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 7715017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 322
Target Start/End: Complemental strand, 10058236 - 10058150
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| || ||||||||| || |||||||||||||| |||||||||| |||| |||||||||| ||||||||||||||    
T  10058236 tttagtgtgtgtttagtatggcggtggggagaattgattttgatataattgagtttgagagtattgattttggttaaaagtgagttg 10058150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 33953856 - 33953938
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| |||| |||| |||||||||||||| ||||||||||||| ||||||||||||||  ||||||||||||||    
T  33953856 gtgtgtgtttggtatggcagtggtgaaaattgattttggtagaattgagtttgagagaattgattttatttaaaagtgagttg 33953938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 8049002 - 8049086
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||| |||||| | |||| || || ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  8049002 ttagtgtgtctttggtatagcggcggtgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 8049086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 32030875 - 32030791
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||| | | ||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||    
T  32030875 ttagtgtgtgtttggtatagtggtggagagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtaagtt 32030791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 34106903 - 34106982
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||||  |  ||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||    
T  34106903 gtgtgtttggtttggcggcagacaaaattgattttgatagaattgagtttaaaagaattgtttttggttaaaagtgagtt 34106982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 3668012 - 3667930
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| | | ||||| || ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  3668012 gtgtgtgtttggtatagtggtggagagaattgattttgatagaattgagtttgagagaattgattttgttaaaaagtgagttg 3667930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 39987920 - 39988002
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| |  ||| || || ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  39987920 agtgtgtgtttggtataccggcggtgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 39988002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 42146466 - 42146384
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| || ||| || || ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  42146466 agtgtgtgtttggtatgacggcggggagaattgattttgatagaattgagtttgagaaaattgattttggttaaaagtgagtt 42146384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 40791021 - 40791105
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||| |  ||| || || ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  40791021 ttagtgtgtgtttggtatcacggcggggagaattgattttgatagaattgagtttgagaaaattgattttggttaaaagtgagtt 40791105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 7178936 - 7178853
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||| |||| ||  || |||||| |||||||||||||||||| |||||||| ||||||| |||||||||||||    
T  7178936 agtgtgtgtttggttcggcgatgatgataattgagtttgatagaattgagtttgagagaattaattttgactaaaagtgagttg 7178853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 40495310 - 40495393
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||| |||||| ||  | ||||||||||||||||||||||||| | | ||||||||||| |||||||||||||    
T  40495310 tagtgtgtgtttggtatggcggcgggaagaattgattttgatagaattgagtttgatataattgattttggttaaaagtgagtt 40495393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 3060205 - 3060259
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  3060205 aattgattttgatagaattaagtttgagagaattgattttgattaaaagtgagtt 3060259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 16158418 - 16158500
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||| |||  || | |||||||||| ||||| |||||||| | |||||||||||||||||||||||||||    
T  16158418 agtgtgtgtttggtttgacggcagccataattgatttttatagatttgagtttgaaagaattgattttgattaaaagtgagtt 16158500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 317
Target Start/End: Original strand, 7385882 - 7385963
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtg 317  Q
    |||||||||||||| || | |||| || || ||||||||||||||||||| ||||| ||||||||||||||| |||||||||    
T  7385882 tttagtgtgtgtttagtatagcggcggtgagaattgattttgatagaattaagttttagagaattgattttggttaaaagtg 7385963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 35847840 - 35847925
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||||  ||||||   | ||||||||||||||||||||||||| || |||||||||||| ||| |||||||||    
T  35847840 tttagtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagtt 35847925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 257 - 321
Target Start/End: Original strand, 41740564 - 41740628
Alignment:
Q  257 cggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||| || ||||||||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  41740564 cggtggggagaattgattttgatagaattgagtttgagagaattgattttgattataggtgagtt 41740628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 27021288 - 27021205
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| ||||||||||||||||||||  | || ||||||||||| |||||||||| ||| ||||||||||| |||||| ||||||    
T  27021288 tagtatgtgtttggtttggcggtggttagaactgattttgatataattgagtttgagaaaattgattttggttaaaaatgagtt 27021205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 267 - 314
Target Start/End: Complemental strand, 4292280 - 4292233
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaa 314  Q
    ||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  4292280 aattgattttgatagaattaagtttgagagaattgattttgattaaaa 4292233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 19203957 - 19204040
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||  |||||| ||| ||||||||||| ||||||||| ||| | | |||||||| ||| |||||||||||||    
T  19203957 tagtgtgtgtttggttatgcggtgacgagaattgattttggtagaattga-ttttacataattgattatgaataaaagtgagttg 19204040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 322
Target Start/End: Original strand, 2694717 - 2694796
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||  |||||| ||| |||||||||||  |||||||| ||| |  |||||||||||| ||||||||||||||    
T  2694717 tgtgtttggttatgcggtgacgagaattgattttgtcagaattgattttgattgaattgattttggttaaaagtgagttg 2694796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 247 - 322
Target Start/End: Original strand, 23914215 - 23914290
Alignment:
Q  247 tttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||| |||||||||||  | ||||||||||||||||||||| ||| |||||||||||| |  |||||| |||||||    
T  23914215 tttgatttggcggtggacataattgattttgatagaattgattttgagagaattgattatacttaaaattgagttg 23914290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 3747542 - 3747627
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||  ||||||   ||||||||||||||||||||||| | | |  |||||||||  ||| ||||||||||||    
T  3747542 ttagtgtgtgtttggttatgcggtgataaaaattgattttgatagaattgattgtgaatgaattgattcggatcaaaagtgagttg 3747627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 267 - 322
Target Start/End: Complemental strand, 19784944 - 19784889
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| ||||||| ||||   |||||||||||| ||||||||||||||    
T  19784944 aattgattttgattgaattgattttatttgaattgattttggttaaaagtgagttg 19784889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 322
Target Start/End: Original strand, 33467951 - 33468028
Alignment:
Q  245 tgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||| ||||||  | |||||||||| | | |||||| ||| | |||| |||||||| ||||||||||||||    
T  33467951 tgtttggtttgacggtggttagaattgattttaacaaaattgattttgatagaactgattttggttaaaagtgagttg 33468028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 41263375 - 41263322
Alignment:
Q  13 tgaaaaagtgaatgttgaatggtgttgaatggtataaaccattggagatggtct 66  Q
    |||||||||| ||||||||||||||||||||   | ||||||||| ||||||||    
T  41263375 tgaaaaagtggatgttgaatggtgttgaatgtgttgaaccattggggatggtct 41263322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 4e-32; HSPs: 66)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 48550347 - 48550265
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  48550347 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagtt 48550265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 236 - 321
Target Start/End: Complemental strand, 54150659 - 54150574
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||| |||||||||| | ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  54150659 tttagtgtgtgtttggtatggcggtggcaagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt 54150574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 28987150 - 28987066
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  28987150 ttagtgtgtgtttggtatggcggtggtgaaaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 28987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 46830025 - 46830108
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  46830025 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttaagtgaattgattttggttaaaagtgagttg 46830108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 25312844 - 25312763
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||||||||  ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  25312844 gtgtgtgtttggtttggcggtaacgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt 25312763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 39636913 - 39636832
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||| || ||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  39636913 tgtgtgtttggtatgacggtggcgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttg 39636832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 43772077 - 43772162
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  43772077 ttagtgtgtgtttggtttggtggtgacgataattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 43772162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 236 - 316
Target Start/End: Complemental strand, 39187867 - 39187787
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagt 316  Q
    ||||||||||||||||||||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  39187867 tttagtgtgtgtttggtttggcggtggagagaattgattttgatagaattgagtttgagagaattgattttggttaaaagt 39187787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 43781477 - 43781557
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  43781477 tgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 43781557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 9889290 - 9889373
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| |||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9889290 tagtatgtgtttggtatggcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt 9889373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 30842258 - 30842179
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| |||||||| ||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30842258 gtgtgtttggtatggcggtgacgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt 30842179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 14072631 - 14072549
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  14072631 gtgtgtgtttggtatggcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgtttaaaagtgagttg 14072549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 234 - 322
Target Start/End: Complemental strand, 51923075 - 51922987
Alignment:
Q  234 gttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||||| |||||| | ||| ||||||||||| ||||||||||||| ||||||||||||||| ||||||||||||||    
T  51923075 gttttagtgtgtgtttggtatggcggcgacgagaattgattttgttagaattgagtttgagagaattgattttggttaaaagtgagttg 51922987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 19592187 - 19592270
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||| | ||||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  19592187 agtgtgtgtttgatatggcggtggggagaattgattttgatagaattgagttttagagaattgattttggttaaaagtgagttg 19592270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 32238015 - 32238098
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||||||| || |||||||||||| ||||||||||||||    
T  32238015 agtgtgtgtttggtatagcggtggcgataattgattttgatagaattgagtttgagtgaattgattttggttaaaagtgagttg 32238098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 6138577 - 6138659
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||||||||| || ||||||||||||||||||||||||| | | ||||||||||| ||||||||||||||    
T  6138577 gtgtgtgtttggtttggcggtggggagaattgattttgatagaattgagtttgaaataattgattttggttaaaagtgagttg 6138659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 26651805 - 26651887
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| |||||| ||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  26651805 gtgtgtgtttggtatggcggcggcgagaattgattttgatagaattaagtttgagagaattgattttggttaaaagtgagttg 26651887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 14564100 - 14564185
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||| ||||| || || ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  14564100 ttagtgtgtgtttggttgggcggcggagagaattgattttgatagaattgagtttgagagaattgattttggttaaatgtgagttg 14564185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 234 - 322
Target Start/End: Complemental strand, 13167660 - 13167572
Alignment:
Q  234 gttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||| |||||||||||||| ||||||| |  |||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  13167660 gtttaagtgtgtgtttggtatggcggtaggaaaaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagttg 13167572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 41866285 - 41866201
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||||||||||||| |||||||||||||| |||||||||| || ||||||| |||  ||||||||||||||    
T  41866285 tagtgtgtgtttggtttggcggtggcgataattgattttgataaaattgagtttgagggaattgagtttagttaaaagtgagttg 41866201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 321
Target Start/End: Complemental strand, 6505340 - 6505249
Alignment:
Q  230 atttgttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| ||||||||||||||||| ||||||| | ||| |||||| |||||||||||||||||| ||||||||||||||| |||||| ||||||    
T  6505340 atttattttagtgtgtgtttggattggcggcgtcgataattgactttgatagaattgagtttgagagaattgattttggttaaaaatgagtt 6505249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 322
Target Start/End: Complemental strand, 16566438 - 16566352
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||| |||| |  | || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  16566438 tttagtgtgtgtttggtatggcagcagggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 16566352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 26426072 - 26426153
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||| || |||||| || ||||||||||||||||||||||||| ||| ||||||||||| |||||||||||||    
T  26426072 gtgtgtgtttggtatgacggtggggagaattgattttgatagaattgagtttgagaaaattgattttggttaaaagtgagtt 26426153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 29149261 - 29149346
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||| |||||| | ||||||| || ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  29149261 ttagtgtgtatttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttg 29149346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 48908402 - 48908321
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||||||| || ||||||||||||| |||  ||||||||| ||||||||||||||| |||||||||||||    
T  48908402 gtgtgtgtttggtttggcggcggtgaaaattgattttaatattattgagtttgagagaattgattttggttaaaagtgagtt 48908321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 246 - 321
Target Start/End: Original strand, 55638718 - 55638793
Alignment:
Q  246 gtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| || ||||| ||||||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  55638718 gtttggtttggtggcggcgagaattgattttgatagaattgagtttgagagaattgatttttgttaaaagtgagtt 55638793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 15603490 - 15603408
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||| |||||| || ||||||||||||||||||||||||| ||| |||||||| || | |||||||||||    
T  15603490 agtgtgtgtttggtttgacggtggggagaattgattttgatagaattgagtttgagataattgattatggtaaaaagtgagtt 15603408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 49519863 - 49519777
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcg---aaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| ||||||||| |   | ||||| ||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  49519863 agtgtgtgtttggtatggcggtggtggtgagaattggttttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 49519777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 321
Target Start/End: Original strand, 48407669 - 48407736
Alignment:
Q  254 tggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||| || ||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  48407669 tggcgctgacgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 48407736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 54153170 - 54153091
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||| | |||||||||| |||||||||| ||| |||||||||| || |||||||||||| ||||||||||||||    
T  54153170 tgtgtttggtatagcggtggcgataattgattttaatataattgagtttgagtgaattgattttggttaaaagtgagttg 54153091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 243 - 321
Target Start/End: Complemental strand, 9893837 - 9893759
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||| ||||||||| || ||||||||||||||||||||| ||| ||||||||||||||  | |||||||||||    
T  9893837 tgtgtttggtatggcggtggtgagaattgattttgatagaattgaatttgagagaattgatttttgtcaaaagtgagtt 9893759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 313
Target Start/End: Complemental strand, 14076147 - 14076070
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaa 313  Q
    |||||| ||||||| ||||||||| || || ||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  14076147 tttagtatgtgtttagtttggcggcggtgagaattgattttgatagaattgagtttgagaaaattgattttggttaaa 14076070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 53532109 - 53532024
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||| ||||||||||| |||||||| || |||||||||||||| |||||||||| | | ||||||||||  ||||||||||||||    
T  53532109 ttagtatgtgtttggttcggcggtggtgagaattgattttgataaaattgagtttgacataattgattttagttaaaagtgagttg 53532024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 236 - 313
Target Start/End: Original strand, 54735604 - 54735681
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaa 313  Q
    |||||| |||| |||||||||||| || || ||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  54735604 tttagtatgtgcttggtttggcggcggtgagaattgattttgatagaattgagtttgagaaaattgattttggttaaa 54735681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 42944861 - 42944937
Alignment:
Q  246 gtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||  ||||||||| | |||| |||||||||||||||| ||| ||||||||||||||| ||||||||||||||    
T  42944861 gtttggtacggcggtggcaagaatttattttgatagaattgattttgagagaattgattttggttaaaagtgagttg 42944937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 33574304 - 33574225
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||| |||||||| | ||||| ||||  ||||||||||||||||||| |||||||| |||||| ||||||||||||||    
T  33574304 tgtgttaggtttggctgcggcgagaattatttttgatagaattgagtttgagagaattaattttggttaaaagtgagttg 33574225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 47750282 - 47750337
Alignment:
Q  13 tgaaaaagtgaatgttgaatggtgttgaatggtataaaccattggagatggtctaa 68  Q
    |||||||||| |||||||||||||||||||||||||||||||||| ||| ||||||    
T  47750282 tgaaaaagtggatgttgaatggtgttgaatggtataaaccattggggattgtctaa 47750337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 19599487 - 19599535
Alignment:
Q  274 tttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||    
T  19599487 tttgatagaattgagtttgagagaattgattttgaataaaagtgagttg 19599535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 46926160 - 46926096
Alignment:
Q  257 cggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||| || ||||||||||||||||||||||||| ||| ||||| ||||| |||||||||||||    
T  46926160 cggtggggataattgattttgatagaattgagtttgagaaaattgtttttggttaaaagtgagtt 46926096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 40286411 - 40286329
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  |||||||  ||||||||||||||||||| ||| ||  | |||||||||||||||||||| |||||||    
T  40286411 agtgtgtgtttggttgtgcggtggacaaaattgattttgatagaactga-ttctatagaattgattttgattaaaattgagttg 40286329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 54488735 - 54488652
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  ||||||| || |||||||||||| |||||||| |||   ||||||||||||  ||||||||||||||    
T  54488735 agtgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttg 54488652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 4954020 - 4954070
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattga 287  Q
    ||||||||||||| |||||||||||| ||||||||||||||| ||||||||    
T  4954020 ttagtgtgtgttttgtttggcggtggagaaaattgattttgagagaattga 4954070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 31520328 - 31520410
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| | ||| |||||| ||||||||||| ||||||  ||||| | |||||| |||||| ||||||||||||||    
T  31520328 gtgtgtgtttggtatagcgatggcgagaattgattttggtagaatgaagtttgaaagaattaattttggttaaaagtgagttg 31520410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 243 - 321
Target Start/End: Original strand, 45779970 - 45780047
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||| |  || ||||||||| ||||||||||||||| ||| ||||||||||| | |||||||||||    
T  45779970 tgtgtttggtttggcggcgatgagaattgatttcgatagaattgagtttgaga-aattgattttggtaaaaagtgagtt 45780047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 287
Target Start/End: Original strand, 48550396 - 48550446
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattga 287  Q
    ||||||||||||||||||||||||||  | |||||||||||||||||||||    
T  48550396 ttagtgtgtgtttggtttggcggtgggaagaattgattttgatagaattga 48550446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 22694556 - 22694636
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaag-agaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||  |||||||  | ||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||    
T  22694556 gtgtgtttggttgtgcggtggaaagaattgattttggtagaattga-tttaagtagaattgattttggttaaaagtgagttg 22694636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 243 - 315
Target Start/End: Original strand, 13183010 - 13183082
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaag 315  Q
    |||||||||| || ||||| ||| |||||||||||||| |||||||| | ||| ||||||||||| |||||||    
T  13183010 tgtgtttggtatgacggtgacgataattgattttgataaaattgagtctgagataattgattttggttaaaag 13183082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 298
Target Start/End: Original strand, 26459852 - 26459911
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaa 298  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||  ||||||| ||||    
T  26459852 agtgtgtgtttggtatggcggtggcgagaattaattttgatagaatgaagtttaaaagaa 26459911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 38306141 - 38306058
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||   |||||| || |||||||||||| |||||||| |||   ||||||||||||  ||||||||||||||    
T  38306141 agtgtgtgtttggttctacggtggagataattgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttg 38306058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 306
Target Start/End: Complemental strand, 54655361 - 54655295
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatttt 306  Q
    |||||||||||||  ||||||| ||| |||||||||||| | |||||||||||| | ||||||||||    
T  54655361 gtgtgtgtttggtacggcggtgacgataattgattttgacataattgagtttaaaataattgatttt 54655295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 321
Target Start/End: Complemental strand, 38264004 - 38263947
Alignment:
Q  264 gaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||| |||||||||| ||| |||| |||||| |||||| ||||||    
T  38264004 gaaaattgattttgatataattgagtttgagaaaattaattttgcttaaaattgagtt 38263947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 233 - 306
Target Start/End: Complemental strand, 48556689 - 48556616
Alignment:
Q  233 tgttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatttt 306  Q
    ||||| |||||| ||||||||  |||||||  | ||||||||||||||||||||||||| | | ||||||||||    
T  48556689 tgtttaagtgtgcgtttggttcagcggtggaaataattgattttgatagaattgagtttgataaaattgatttt 48556616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 321
Target Start/End: Complemental strand, 49136647 - 49136570
Alignment:
Q  244 gtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||  | |  |||||||| || || |||||||||| |||||||||||| || |||||||||||||    
T  49136647 gtgtttggtttggcggcagagttaattgattctggtataattgagtttgagagaattgattatggttaaaagtgagtt 49136570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 235 - 304
Target Start/End: Complemental strand, 54683522 - 54683453
Alignment:
Q  235 ttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatt 304  Q
    |||||||||||||||||||  ||||||   ||||||||||||||||||||||| ||| |  |||||||||    
T  54683522 ttttagtgtgtgtttggttctgcggtgaaaaaaattgattttgatagaattgattttgaatgaattgatt 54683453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 234 - 321
Target Start/End: Original strand, 4649880 - 4649967
Alignment:
Q  234 gttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| |||||||||||||||  | ||||   | |||||||||||||| |||||||||| || |||||||||||| ||| ||| |||||    
T  4649880 gtttaagtgtgtgtttggttctgtggtgagtagaattgattttgataaaattgagtttgagtgaattgattttggttagaagcgagtt 4649967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 5025658 - 5025576
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  |||||| | ||||||||||||||| ||||||| |||   ||||||||||||  ||| ||||||||||    
T  5025658 agtgtgtgtttggttatgcggtgactaaaattgattttgattgaattga-ttttgtagaattgattttagttagaagtgagttg 5025576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 33 - 68
Target Start/End: Complemental strand, 10089852 - 10089817
Alignment:
Q  33 ggtgttgaatggtataaaccattggagatggtctaa 68  Q
    ||||||||||||||||||||||||| ||||||||||    
T  10089852 ggtgttgaatggtataaaccattggggatggtctaa 10089817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 314
Target Start/End: Complemental strand, 5835878 - 5835805
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaa 314  Q
    ||||||||||||||  |  ||| ||||||||||||||||| ||||||| |||   ||||||||||||||||||||    
T  5835878 gtgtgtgtttggttatgttgtgacgaaaattgattttgattgaattga-ttttgtagaattgattttgattaaaa 5835805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 15619703 - 15619661
Alignment:
Q  280 agaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||| ||||||||||||||| | ||||||||||||    
T  15619703 agaattgagtttgagagaattgattttggtaaaaagtgagttg 15619661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 53914987 - 53914945
Alignment:
Q  280 agaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||| ||||||| |||||||| |||||||||||||    
T  53914987 agaattgagtttcagagaatcgattttgactaaaagtgagttg 53914945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 238 - 279
Target Start/End: Original strand, 2175132 - 2175173
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgat 279  Q
    |||||||||||||||| ||||| || ||||||||||||||||    
T  2175132 tagtgtgtgtttggttcggcggcggtgaaaattgattttgat 2175173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 28947708 - 28947788
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagag-aattgattttgattaaaagtgagttg 322  Q
    ||||||||||||  |||||||  | ||||||||||| | ||||||| |||||| | ||||||||||| ||||||||||||||    
T  28947708 gtgtgtttggttgtgcggtggaaagaattgattttggtggaattga-tttaagtggaattgattttggttaaaagtgagttg 28947788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 46958135 - 46958090
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattga 287  Q
    ||||||||||||  |||||||  |||||||||||||||||||||||    
T  46958135 gtgtgtttggttgtgcggtggaaaaaattgattttgatagaattga 46958090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 3652791 - 3652743
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattga 287  Q
    |||||||||||||||  ||||||   |||||||||||||||||||||||    
T  3652791 agtgtgtgtttggttctgcggtgataaaaattgattttgatagaattga 3652743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 36150719 - 36150671
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattga 287  Q
    |||||||||||||||  |||||| ||| |||||||||||||| ||||||    
T  36150719 agtgtgtgtttggttgtgcggtgacgagaattgattttgatataattga 36150671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 321
Target Start/End: Original strand, 56241845 - 56241873
Alignment:
Q  293 agagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||||||||||||||||    
T  56241845 agagaattgattttgattaaaagtgagtt 56241873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 70; Significance: 2e-31; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 37562738 - 37562653
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  37562738 ttagtgtgtgtttggtttggcggtggggagaattgattttgatagaattgagtttaagagaattgatttttgttaaaagtgagttg 37562653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 41715822 - 41715741
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||| |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  41715822 gtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgattttaagagaattgattttgattaaaagtgagtt 41715741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 3622401 - 3622486
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| | |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  3622401 ttagtgtgtgtttgttatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 3622486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 47217487 - 47217566
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||| ||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  47217487 gtgtgtttggttcggcggcggtgaaaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt 47217566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 34010504 - 34010422
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  34010504 agtgtgtgtttggtt-ggcggtggcgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtgagttg 34010422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 43631642 - 43631721
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| ||||||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  43631642 gtgtgtttggtatggcggtggggataattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 43631721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 46541762 - 46541683
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||| ||| ||||||||||    
T  46541762 tgtgtttggtttggcggtggttaaaattgattttgatagaattgagtttgagagaattgattttggttagaagtgagttg 46541683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 3342955 - 3342873
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  3342955 gtgtgtgtttggtttggcggtggggagaattaattttgatagaattgagtttgagagaattgattttagttaaaagtgagttg 3342873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 32187106 - 32187024
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||| |||||||| || ||||||||| ||||||||||||||||||| | |||||||||||||||||||||||||||||||||    
T  32187106 agtgtatgtttggtatgacggtggcgagaattgattttgatagaattaattttaagagaattgattttgattaaaagtgagtt 32187024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 238 - 318
Target Start/End: Complemental strand, 37639597 - 37639517
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    ||||||||||||||| |||||| || || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  37639597 tagtgtgtgtttggtatggcggcggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtga 37639517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 39391083 - 39391162
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| |||||||||||||||||||||||||||||||||| |||   ||||||||||||| |||||||||||||    
T  39391083 gtgtgtttggtatggcggtggcgaaaattgattttgatagaattgatttttttagaattgattttggttaaaagtgagtt 39391162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 48459876 - 48459793
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| || || ||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  48459876 agtgtgtgtttggtatgacgttggtgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 48459793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 38230232 - 38230151
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||| ||||||  | || ||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||    
T  38230232 tgtgtgtttggtatggcggccgagagaattgattttgatagaattgaatttaagagaattgattttggttaaaagtgagttg 38230151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 10371900 - 10371984
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||    |||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  10371900 tagtgtgtgtttggtaaaacggtggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 10371984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 240 - 319
Target Start/End: Complemental strand, 19097562 - 19097483
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgag 319  Q
    ||||||||||||| |||||| || || |||| |||||||||||||||||||| | |||||||||||||||||||||||||    
T  19097562 gtgtgtgtttggtatggcggcggtgagaattaattttgatagaattgagtttgaaagaattgattttgattaaaagtgag 19097483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 39977719 - 39977636
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| | ||||||||||||  | |||||||||||    
T  39977719 tagtgtgtgtttggtatggcggtggcgataattgattttgatagaatttagtttgaaagaattgattttagtcaaaagtgagtt 39977636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 242 - 317
Target Start/End: Complemental strand, 48134742 - 48134667
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtg 317  Q
    ||||||||||| ||||||| ||||||||| |||||||||||||||||||| ||||||||||||||  |||||||||    
T  48134742 gtgtgtttggtatggcggttgcgaaaattaattttgatagaattgagtttgagagaattgatttttgttaaaagtg 48134667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 243 - 316
Target Start/End: Original strand, 386428 - 386501
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagt 316  Q
    ||||||||||||||||||||  |||||||||||||||| |||||||||| |||| |||||||||| ||||||||    
T  386428 tgtgtttggtttggcggtggttaaaattgattttgatataattgagtttgagagtattgattttggttaaaagt 386501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 246 - 322
Target Start/End: Original strand, 44967349 - 44967425
Alignment:
Q  246 gtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| || |||| |||| |||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  44967349 gtttggtatgacggtagcgagaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagttg 44967425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 47022082 - 47022002
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||| ||  ||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  47022082 gtgtgtttggtatgatggtggggataattgattttgatagaattgagtttgagagaattgattttggttaaaagtaagttg 47022002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 244 - 321
Target Start/End: Original strand, 12632031 - 12632108
Alignment:
Q  244 gtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| ||||||| || |||||||||||||||||||  |||| ||||||| ||||||| |||||||||||||    
T  12632031 gtgtttggtttcgcggtggagagaattgattttgatagaattttgtttgagagaatagattttggttaaaagtgagtt 12632108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 237 - 313
Target Start/End: Original strand, 34010902 - 34010978
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaa 313  Q
    ||||| ||||||||||||||| | || || ||||||||||||||||||||||||| ||| ||||||||||| |||||    
T  34010902 ttagtatgtgtttggtttggcagcggtgataattgattttgatagaattgagtttgagaaaattgattttggttaaa 34010978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 34365924 - 34366008
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||| |||||||||| | |||||||||||||| ||| |||||| | ||||||||||||  |||||||| |||||    
T  34365924 tagtgtgtgtttggtatggcggtggctagaattgattttgatataatggagtttgaaagaattgattttagttaaaagttagttg 34366008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 3375657 - 3375574
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| ||||||||||  || | ||| || ||||||||||||||||||||||||| |||||||| |||||| |||||||||||||    
T  3375657 tagtatgtgtttggtacggtgatggagagaattgattttgatagaattgagtttgagagaattaattttggttaaaagtgagtt 3375574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 24770854 - 24770937
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||| ||||||| || ||||| ||| |||| |||||||||||||| ||||| ||| ||||||||||| ||||||||||||||    
T  24770854 agtgtgcgtttggtatgacggtgacgagaattaattttgatagaattaagtttgagataattgattttggttaaaagtgagttg 24770937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 43737881 - 43737964
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||| || |||||  || || |||||||||| | | ||||||||||||||||||||||||||||||||||| ||||    
T  43737881 tagtgtgtgtttagtatggcgacggtgagaattgattttaacataattgagtttaagagaattgattttgattaaaagttagtt 43737964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 40903112 - 40903194
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  | |||||||||||||||||||| | |||||| ||| | |||||||||||||  |||||||||||||    
T  40903112 gtgtgtgtttggttttccagtggcgaaaattgattttgacataattgattttgatagaattgattttgcctaaaagtgagttg 40903194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 39634106 - 39634191
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||  ||||||| || ||||||||| || |||||||| |||   ||||||||||||| ||||||||||||||    
T  39634106 ttagtgtgtgtttggttctgcggtggagagaattgatttggacagaattgattttgttagaattgattttggttaaaagtgagttg 39634191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 42752132 - 42752217
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||  ||||||| || |||||||||||| |||||||| |||   ||||||||||||  ||||||||||||||    
T  42752132 ttagtgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttg 42752217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 321
Target Start/End: Complemental strand, 9456268 - 9456188
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||| ||||||  |||||| | || ||||||||||||||||||| ||||  ||||||||||||||| |||||||||||||    
T  9456268 tgtgtctttggtacggcggtagtgagaattgattttgatagaattaagttcgagagaattgattttggttaaaagtgagtt 9456188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 321
Target Start/End: Complemental strand, 42904725 - 42904637
Alignment:
Q  233 tgttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||| |||||||||||||| |||| ||||  |||||  |||||||||||||||||||| ||||||||| |||||  ||||| ||||||    
T  42904725 tgtttaagtgtgtgtttggtatggcagtgggaaaaatgaattttgatagaattgagtttgagagaattgtttttggataaaaatgagtt 42904637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 322
Target Start/End: Complemental strand, 2839464 - 2839373
Alignment:
Q  231 tttgttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| ||| |||||||||||  |||||| |||||||||||| |||| ||||||| ||| | ||||| |||||| || ||||||||||||    
T  2839464 tttgtttgagtatgtgtttggttatgcggtgacgaaaattgattatgattgaattgattttgatagaatagatttttatgaaaagtgagttg 2839373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 263 - 322
Target Start/End: Complemental strand, 12964740 - 12964681
Alignment:
Q  263 cgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||  ||| ||||||||||    
T  12964740 cgaaaattgattttgatagaattgagtttgagataattgattttcgttataagtgagttg 12964681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 314
Target Start/End: Original strand, 43186537 - 43186613
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaa 314  Q
    |||||||||||||||||  |||||||  |||||||||||||||| |||||| ||  | ||||||||||||||||||||    
T  43186537 ttagtgtgtgtttggttgtgcggtggataaaattgattttgatataattga-ttctatagaattgattttgattaaaa 43186613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 36920123 - 36920203
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||  ||| | || || |||| ||||||||| |||||||||| | ||||||||||||| |||||||||||||    
T  36920123 tgtgtgtttggtcgggctgcggtgagaattaattttgataaaattgagtttgaaagaattgattttggttaaaagtgagtt 36920203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 271 - 322
Target Start/End: Complemental strand, 3750820 - 3750769
Alignment:
Q  271 gattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||| ||| |||||||||| ||||||||||||||| ||||||||||||||    
T  3750820 gattttaataaaattgagtttgagagaattgattttggttaaaagtgagttg 3750769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 37008296 - 37008376
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| |  |||||||||||| ||||||| |||||||||| |||    |||||||||||| |||||||||||||    
T  37008296 agtgtgtgtttggtat--cggtggcgaaaactgatttttatagaattgattttgttggaattgattttggttaaaagtgagtt 37008376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 242 - 322
Target Start/End: Complemental strand, 20089032 - 20088952
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaag-agaattgattttgattaaaagtgagttg 322  Q
    ||||||| ||||  |||||||  | ||||||||||||||||||||| |||||| | ||||||||||| ||||||||||||||    
T  20089032 gtgtgttcggttgtgcggtggaaagaattgattttgatagaattga-tttaagtataattgattttggttaaaagtgagttg 20088952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 317
Target Start/End: Original strand, 12212440 - 12212490
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtg 317  Q
    |||||||||||||||||||||| || || |||||||||||| ||| |||||    
T  12212440 aattgattttgatagaattgagcttgagtgaattgattttggttagaagtg 12212490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 322
Target Start/End: Complemental strand, 42740521 - 42740475
Alignment:
Q  276 tgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||| |||||||||| ||||||||||||||| |||||||| |||||    
T  42740521 tgatataattgagtttgagagaattgattttggttaaaagtaagttg 42740475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 25 - 66
Target Start/End: Complemental strand, 22191223 - 22191182
Alignment:
Q  25 tgttgaatggtgttgaatggtataaaccattggagatggtct 66  Q
    |||||||||||||||||||||| |||||||| | ||||||||    
T  22191223 tgttgaatggtgttgaatggtaaaaaccattagggatggtct 22191182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 25472152 - 25472193
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttga 308  Q
    ||||||||||||||||||||| ||| | ||||||||||||||    
T  25472152 aattgattttgatagaattgattttgacagaattgattttga 25472193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 287
Target Start/End: Complemental strand, 38494364 - 38494319
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattga 287  Q
    ||||||||||||  |||||||||||||||||||||| | |||||||    
T  38494364 gtgtgtttggttgtgcggtggcgaaaattgattttgtttgaattga 38494319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 4022268 - 4022308
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgata 280  Q
    ||||||||||||||| |||||| |||||||||| |||||||    
T  4022268 gtgtgtgtttggttttgcggtgtcgaaaattgagtttgata 4022308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 21654852 - 21654816
Alignment:
Q  32 tggtgttgaatggtataaaccattggagatggtctaa 68  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  21654852 tggtgttgaatggtaaaaaccattggggatggtctaa 21654816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 2e-31; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 50664905 - 50664820
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  50664905 ttagtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 50664820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 48189398 - 48189481
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||  ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  48189398 agtgtgtgtttggtagggcggtggcgataattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttg 48189481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 42475855 - 42475772
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||| |||||||||||||||| ||| |||||||||| |||||||||||||| |||||||||||||||||||||||||||||    
T  42475855 tagtgtgcgtttggtttggcggtgacgagaattgatttttatagaattgagtttgagagaattgattttgattaaaagtgagtt 42475772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 44939368 - 44939455
Alignment:
Q  235 ttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||| | |||||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  44939368 ttttagtgtgtgtttggtatagcggtggcgataattgattttgatagaattgaatttgagtgaattgattttgattaaaagtgagttg 44939455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 239 - 320
Target Start/End: Original strand, 38172263 - 38172344
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagt 320  Q
    |||||||||||||||||||||||| || |||||||||| |||||||||||||| ||||||||||||||| ||||||||||||    
T  38172263 agtgtgtgtttggtttggcggtggggagaattgattttaatagaattgagtttgagagaattgattttggttaaaagtgagt 38172344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 238 - 318
Target Start/End: Original strand, 52966764 - 52966844
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  52966764 tagtgtgtgtttggtttggaggtggagaaaattgattttgatagaattgattttgagagaattgattttggttaaaagtga 52966844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 235 - 322
Target Start/End: Complemental strand, 10334287 - 10334200
Alignment:
Q  235 ttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||| | |||||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  10334287 ttttagtgtgtgtttgatatggcggtgacgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtcagttg 10334200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 55154646 - 55154563
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||| ||||||| ||||||||||||||||||||||||| ||||||||||||||  ||||||||||||||    
T  55154646 agtgtgtgtttggtatggcagtggcgagaattgattttgatagaattgagtttgagagaattgattttagttaaaagtgagttg 55154563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 10853224 - 10853305
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||| | ||||||| || ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  10853224 gtgtgtgtttggtatagcggtggtgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 10853305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 23496464 - 23496379
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||| |||||| |  || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  23496464 ttagtgtgtgtttggtatggcggcgaggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 23496379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 42318473 - 42318392
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||| | |||||| ||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  42318473 gtgtgtgtttggtatagcggtgacgataattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 42318392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 3348389 - 3348305
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||  | |||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||    
T  3348389 tagtgtgtgtttggcatagcggtggcgagaattgattttgatagaattgagtttaagtgaattgattttggttagaagtgagttg 3348305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 30811487 - 30811571
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  ||||||| ||| |||||||||||||| |||||| ||| ||||||||||||||||||||||||||||||    
T  30811487 tagtgtgtgtttggtagggcggtgacgagaattgattttgatataattgaatttgagagaattgattttgattaaaagtgagttg 30811571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 4984731 - 4984644
Alignment:
Q  234 gttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||||| ||||||||| || |||||||||||||| |||||| ||| ||| ||||||||||| |||||||||||||    
T  4984731 gttttagtgtgtgtttggtatggcggtggggagaattgattttgatataattgaatttgagaaaattgattttggttaaaagtgagtt 4984644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 15511332 - 15511415
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||||||||| |||||||||||||||||  |||||| | ||||||||||||| ||||||||||||||    
T  15511332 agtgtgtgtttggtatggcggtggcgataattgattttgatagaacggagtttgaaagaattgattttggttaaaagtgagttg 15511415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 255 - 322
Target Start/End: Complemental strand, 35425462 - 35425395
Alignment:
Q  255 ggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  35425462 ggcggtgacgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagttg 35425395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 26519808 - 26519726
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| | ||||||| || ||||||||||||||||||||||||| ||||||||||||||| | ||||||||||||    
T  26519808 gtgtgtgtttggtatagcggtggggagaattgattttgatagaattgagtttgagagaattgattttgctaaaaagtgagttg 26519726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 239 - 317
Target Start/End: Original strand, 38125398 - 38125476
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtg 317  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||||| ||| ||||||||||||||| |||||||||    
T  38125398 agtgtgtgtttggtatggcggtgacgagaattgattttgatagaattgaatttgagagaattgattttggttaaaagtg 38125476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 234 - 321
Target Start/End: Complemental strand, 21225140 - 21225053
Alignment:
Q  234 gttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||| |||||||||||||| |||| ||||| ||||||| |  |||||||||||||| ||||||||||||||| |||||||||||||    
T  21225140 gttttaatgtgtgtttggtttagcggcggcgagaattgatctctatagaattgagtttgagagaattgattttggttaaaagtgagtt 21225053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 53075046 - 53074965
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| |  ||||| || ||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||    
T  53075046 gtgtgtgtttgatacggcggcggtgaaaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagtt 53074965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 257 - 321
Target Start/End: Complemental strand, 35930865 - 35930801
Alignment:
Q  257 cggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||| || ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||    
T  35930865 cggtggtgagaattgattttgatagaattgagtttgagagaattgatttttattaaaagtgagtt 35930801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 321
Target Start/End: Complemental strand, 52813362 - 52813278
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||||  ||||||   ||||||||||||||||||||||||||| || |||||||||||| ||| |||||||||    
T  52813362 ttagtgtgtgtttggttctgcggtgagtaaaattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagtt 52813278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 19877558 - 19877479
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||| |||| ||| | |||||||| |||||||||||||||||||| | ||||||||||||| ||||||||||||||    
T  19877558 tgtgtttgatttgacggcgacgaaaatttattttgatagaattgagtttgaaagaattgattttggttaaaagtgagttg 19877479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 16246049 - 16246132
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| |||||||||||||||||||| |||| ||||||| || ||||||||||||||  |||||||||||||  |||||||||||||    
T  16246049 tttactgtgtgtttggtttggcggtagcgagaattgatattaatagaattgagttt--gagaattgattttagttaaaagtgagtt 16246132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 38340949 - 38340867
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| ||||| ||| || ||||||||||||||||||  ||||| | ||||||||||||| ||||||||||||||    
T  38340949 gtgtgtgtttggtatggcgttggtgagaattgattttgatagaatgaagtttgaaagaattgattttggttaaaagtgagttg 38340867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 34561251 - 34561170
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||  || |||| |||||||||||||||||||||| ||||| | | ||||||||||| ||||||||||||||    
T  34561251 tgtgtgtttggttcagcagtggagaaaattgattttgatagaattaagtttgataaaattgattttggttaaaagtgagttg 34561170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 8424689 - 8424769
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||| || | |||||||  | |||||| |||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  8424689 gtgtgtttagtatagcggtggtcataattgaatttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 8424769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 20813290 - 20813208
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |  |||||| || ||||||||||||||||| ||||||| |||||||||  |||| ||||||||||||||    
T  20813290 agtgtgtgtttggtatatcggtggagagaattgattttgatagaa-tgagtttgagagaattgtgtttggttaaaagtgagttg 20813208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 237 - 287
Target Start/End: Complemental strand, 31084339 - 31084289
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattga 287  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||||    
T  31084339 ttagggtgtgtttggtttggcggtggcgagaattgattttgaaagaattga 31084289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 44224907 - 44224825
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||| ||||||||||||||| || || ||||||||  | ||||||||||||| ||| |||||||| || |||||||||||||    
T  44224907 agtgtttgtttggtttggcggcggggagaattgattccggtagaattgagtttgagataattgattatggttaaaagtgagtt 44224825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 40415250 - 40415335
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||| ||||||||||||| |||    || |||||||||||||||||||||||||||  |||| ||||||  ||||||||||||||    
T  40415250 ttagtatgtgtttggtttgccggctaggagaattgattttgatagaattgagtttaaaggaatcgattttagttaaaagtgagttg 40415335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 267 - 322
Target Start/End: Original strand, 14651086 - 14651141
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||| ||| |||||| ||| | ||||||||||||||||||||||||||||    
T  14651086 aattgattttaataaaattgattttgatagaattgattttgattaaaagtgagttg 14651141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 25181351 - 25181273
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||  |||||||| | ||||||| ||||| ||||||| |||   |||||||||||||||||||||||||||    
T  25181351 gtgtgtttggttatgcggtggctagaattgatattgattgaattgattttgt-agaattgattttgattaaaagtgagtt 25181273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 271 - 321
Target Start/End: Original strand, 29716674 - 29716724
Alignment:
Q  271 gattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||| |||||| ||| ||||||||||||||| |||||||||||||    
T  29716674 gattttgataaaattgaatttgagagaattgattttggttaaaagtgagtt 29716724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 321
Target Start/End: Original strand, 23207041 - 23207106
Alignment:
Q  256 gcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||||||||||| |||||| |||   | ||||||||||| |||||| ||||||    
T  23207041 gcggtggcgaaaattgattttgatataattgattttgttataattgattttggttaaaaatgagtt 23207106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 291
Target Start/End: Original strand, 31618368 - 31618420
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagttt 291  Q
    |||||||||||||| || ||||||  | |||||||||||||||||||||||||    
T  31618368 agtgtgtgtttggtatgacggtgggaagaattgattttgatagaattgagttt 31618420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 45423728 - 45423808
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||  | ||||||||||||||||||||  | |||||| | | | |||||||||||||  |||||||||||||    
T  45423728 gtgtgtttggttctgtggtggcgaaaattgattttggcataattgattctgatagaattgattttgcctaaaagtgagttg 45423808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 49526628 - 49526704
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    ||||||||||||  ||||| || | |||||| ||||||  |||||| ||| | ||||||||||||||||||||||||    
T  49526628 gtgtgtttggttctgcggtagcaagaattgagtttgatgaaattgattttgatagaattgattttgattaaaagtga 49526704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 274 - 321
Target Start/End: Complemental strand, 53179958 - 53179911
Alignment:
Q  274 tttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||||| | | ||||||||||| |||||||||||||    
T  53179958 tttgatagaattgagttttatataattgattttggttaaaagtgagtt 53179911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 31084311 - 31084269
Alignment:
Q  280 agaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||| ||| | ||||||||||||||||||||||||||||    
T  31084311 agaattgattttgaaagaattgattttgattaaaagtgagttg 31084269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 44225709 - 44225628
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||  | ||||| ||||||||||||| ||| |||||| |||   ||||||||||||  |||||||||||||    
T  44225709 agtgtgtgtttggttgtgtggtggagaaaattgattttaatataattga-ttttgtagaattgattttcgttaaaagtgagtt 44225628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 322
Target Start/End: Complemental strand, 53568051 - 53567994
Alignment:
Q  264 gaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  ||||||| ||||  | ||||||||||||||||||||||||||    
T  53568051 gaaaattgattttgagtgaattgattttacaa-aattgattttgattaaaagtgagttg 53567994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 306
Target Start/End: Original strand, 5045970 - 5046035
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatttt 306  Q
    |||||||||||||| | ||||||| |||||| ||||||| ||||||| ||| | | ||||||||||    
T  5045970 tgtgtgtttggttttgtggtggcggaaattgtttttgattgaattgatttttacaaaattgatttt 5046035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 293 - 322
Target Start/End: Original strand, 30301199 - 30301228
Alignment:
Q  293 agagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||||||||||||||||    
T  30301199 agagaattgattttgattaaaagtgagttg 30301228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 41890549 - 41890497
Alignment:
Q  13 tgaaaaagtgaatgttgaatggtgttgaatggtataaaccattggagatggtct 66  Q
    ||||||||||| |||||||||||||||||||||  |||||||||  ||||||||    
T  41890549 tgaaaaagtga-tgttgaatggtgttgaatggtgaaaaccattgtggatggtct 41890497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 66
Target Start/End: Complemental strand, 42601776 - 42601724
Alignment:
Q  13 tgaaaaagtgaatgttgaatggtgttgaatggtataaaccattggagatggtct 66  Q
    ||||||||||  ||||||||||||||||| || | |||||||||||||||||||    
T  42601776 tgaaaaagtgggtgttgaatggtgttgaaagg-aaaaaccattggagatggtct 42601724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 33748690 - 33748658
Alignment:
Q  33 ggtgttgaatggtataaaccattggagatggtc 65  Q
    ||||||||||||||||||||||||| |||||||    
T  33748690 ggtgttgaatggtataaaccattggggatggtc 33748658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 2e-30; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 3467686 - 3467603
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  3467686 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 3467603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 22936747 - 22936832
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| ||||||||||||||    
T  22936747 ttagtgtgtgtttggtatggcggtggcgagaattgattttgatagaattaagtttgagagaattgattttggttaaaagtgagttg 22936832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 38114599 - 38114514
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||||||||||| || |||| |||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  38114599 ttagtgtgtgtttggtttggcggtggtgagaatttattttgatagaattgagtttgagagaattgattttggttaaaagtaagttg 38114514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 308
Target Start/End: Complemental strand, 29023380 - 29023307
Alignment:
Q  235 ttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttga 308  Q
    |||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  29023380 ttttagtgtgtgttcggtatggtggtggcgaaaattgattttgatagaattgagtttgagagaattgattttga 29023307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 41289016 - 41289097
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||| |||||||||||||| ||||| |||||||||||| |||||||||||| |||||||||||||| |||||||||||||||    
T  41289016 tgtgggtttggtttggcggcggcgagaattgattttgacagaattgagtttgagagaattgattttaattaaaagtgagttg 41289097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 4941739 - 4941819
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||| |||||||||| | |||||||| ||||| |||||||||| |||||||||||||||||||||||||||||    
T  4941739 tgtgtgtttggtatggcggtggctagaattgattctgatataattgagtttgagagaattgattttgattaaaagtgagtt 4941819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 28425426 - 28425510
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||| |||   ||||||||||||| |||||||||||||    
T  28425426 ttagtgtgtgtttggtatgacggtggcgaaaattgattttgatagaattgattttgttagaattgattttggttaaaagtgagtt 28425510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 25697917 - 25697999
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| ||||| | ||||||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  25697917 gtgtgtgcttggtatagcggtggagagaattgattttgatagaattgagtttgagagaattgattttgcttaaaagtgagttg 25697999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 30759258 - 30759344
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||||||||| |||  | |||||||||| ||| |||||||||| ||||||||||||||| ||||||||||||||    
T  30759258 tttagtgtgtgtttggtttggcgatgggaagaattgattttaatataattgagtttgagagaattgattttggttaaaagtgagttg 30759344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 36121502 - 36121584
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||   |||||| ||| |||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  36121502 gtgtgtgtttggtacagcggtgtcgagaattgattttgatagaattgagtttaagtgaattgattttggttaaaagtgagttg 36121584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 241 - 318
Target Start/End: Complemental strand, 27649896 - 27649819
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    ||||||||||||| ||||||| ||| ||||||||||||||||||||||||| | ||||||||||||| ||||||||||    
T  27649896 tgtgtgtttggttgggcggtgacgagaattgattttgatagaattgagtttgaaagaattgattttggttaaaagtga 27649819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 321
Target Start/End: Original strand, 36113999 - 36114079
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||| || ||| || || ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||    
T  36113999 tgtgtgtttggtatgacggcggtgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtaagtt 36114079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 3097162 - 3097244
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| | || |||| || |||| |||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  3097162 agtgtgtgtttggtatagcagtggtgagaattaattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 3097244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 318
Target Start/End: Original strand, 30085596 - 30085674
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    ||||||||||||| | |||| || || |||||||||||||| |||||||||||||||||||||||||| ||||||||||    
T  30085596 gtgtgtgtttggtatagcggcggtgagaattgattttgatataattgagtttaagagaattgattttggttaaaagtga 30085674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 440143 - 440228
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||| | ||| || || ||||||||||||||||||||||| | ||||||||||||||| ||||| ||||||||    
T  440143 ttagtgtgtgtttggttggacggcggagataattgattttgatagaattgagtctgagagaattgattttggttaaatgtgagttg 440228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 33626988 - 33627073
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||| |||||||| |  ||||||||||||||||||||||||| | ||||||||||||  |||||| |||||||    
T  33626988 ttagtgtgtgtttggttcggcggtggagggaattgattttgatagaattgagtttgaaagaattgattttatttaaaactgagttg 33627073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 239 - 308
Target Start/End: Complemental strand, 44927008 - 44926939
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttga 308  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| | |||||||| |||||    
T  44927008 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgatagaattgagtttga 44926939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 24897547 - 24897627
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||| |||||| ||  | |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  24897547 gtgtgtttggtatggcggcggtaagaattgattttgataaaattgagtttatgagaattgattttggttaaaagtgagttg 24897627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 321
Target Start/End: Complemental strand, 26243274 - 26243195
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| | ||||  | || ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  26243274 gtgtgtttggtatagcggcagtgagaattgattttgatagaattgagtttaagagaattgatttttgttaaaagtgagtt 26243195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 242 - 321
Target Start/End: Original strand, 42143323 - 42143402
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| |||||||||||| |||||||| ||||| |||||||||| ||| ||||||||||  |||||||||||||    
T  42143323 gtgtgtttggtatggcggtggcgagaattgattatgatataattgagtttgagaaaattgattttagttaaaagtgagtt 42143402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 239 - 322
Target Start/End: Complemental strand, 25497845 - 25497761
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaa-aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| |||| | ||  || |||||||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  25497845 agtgtgtgtttggtatggccgagggtaagaattgattttgataaaattgagtttaggagaattgattttggttaaaagtgagttg 25497761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 3465396 - 3465478
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||  ||||||   | ||||||||||||||||||||||||| || |||||||||||| ||| |||||||||    
T  3465396 agtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagtt 3465478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 309
Target Start/End: Complemental strand, 26125910 - 26125840
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgat 309  Q
    ||||||| ||||||   ||||||| || |||| ||||||||||||||||||||||||||||||||||||||    
T  26125910 agtgtgtctttggtacagcggtggtgagaattaattttgatagaattgagtttaagagaattgattttgat 26125840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Original strand, 40742279 - 40742333
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||||||||||||||| ||||||||||||  |||||||||||||    
T  40742279 aattgattttgatagaattgagtttaaaagaattgattttcgttaaaagtgagtt 40742333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 44926965 - 44926911
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||| |||||||||||||||||| ||||||||||||||| |||||||||||||    
T  44926965 aattgagtttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 44926911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 322
Target Start/End: Complemental strand, 15206850 - 15206766
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||  | ||||| || |||| |||||||||||||||||||| | | |||||||||||  |||||||||||||    
T  15206850 tagtgtgtgtttggttcagtggtggagagaattaattttgatagaattgagtttgacaaaattgattttgggtaaaagtgagttg 15206766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 243 - 322
Target Start/End: Complemental strand, 36779539 - 36779461
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||  |||||| ||| |||||||||||||| |||||| |||   ||||||||||||||||||||||||||||    
T  36779539 tgtgtttggttgtgcggtgacgagaattgattttgatataattgattttgt-agaattgattttgattaaaagtgagttg 36779461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 6399064 - 6399146
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||||||||  | |  |||||||| || ||||||||||||| | |||||||||| || |||||||||||||    
T  6399064 agtgtgtgtttggtttggcggcagagttaattgattctggtagaattgagtttgatagaattgattatggttaaaagtgagtt 6399146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 263 - 316
Target Start/End: Original strand, 6876603 - 6876656
Alignment:
Q  263 cgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagt 316  Q
    |||||||| || || |||||||||||||||| ||||||||||||||||||||||    
T  6876603 cgaaaattaatctttatagaattgagtttaacagaattgattttgattaaaagt 6876656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 322
Target Start/End: Original strand, 31246273 - 31246354
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||  ||||||| || |||||||||||| |||||||| |||   ||||||||||||  ||||||||||||||    
T  31246273 tgtgtgtttggttctgcggtggagataattgattttgacagaattgattttgttagaattgatttttgttaaaagtgagttg 31246354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 240 - 321
Target Start/End: Complemental strand, 35550372 - 35550292
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| ||| |||||||||||||||||||||||| ||||||| |||   | |||||||||| || |||||||||||    
T  35550372 gtgtgtgtttgattttgcggtggcgaaaattgattttgattgaattga-ttttgtaaaattgatttttatcaaaagtgagtt 35550292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 249 - 321
Target Start/End: Original strand, 30081617 - 30081689
Alignment:
Q  249 tggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||| ||||||| |||||||||||||||||| |||||| |||  || ||||||||||  |||||||||||||    
T  30081617 tggttcggcggtgacgaaaattgattttgataaaattgattttgtgaaaattgattttagttaaaagtgagtt 30081689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 68
Target Start/End: Original strand, 30470876 - 30470931
Alignment:
Q  13 tgaaaaagtgaatgttgaatggtgttgaatggtataaaccattggagatggtctaa 68  Q
    ||||||| || || ||||||||||||||||||| ||||||||||| ||||||||||    
T  30470876 tgaaaaaatggatcttgaatggtgttgaatggtgtaaaccattggggatggtctaa 30470931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 263 - 322
Target Start/End: Original strand, 40792184 - 40792243
Alignment:
Q  263 cgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| ||| |||||| ||| | | ||||||||||||||||||||||||||    
T  40792184 cgaaaattgattttaataaaattgattttgatataattgattttgattaaaagtgagttg 40792243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 3619026 - 3619108
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||  |||||    ||||||||||||||||||||||| ||| |  ||||||||| |||| ||||||||||||    
T  3619026 gtgtgtgtttggttccgcggtcataaaaattgattttgatagaattgattttgaatgaattgattctgatcaaaagtgagttg 3619108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 323
Target Start/End: Complemental strand, 6065439 - 6065357
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttgt 323  Q
    |||||||||||||  ||||||   |||||| | |||||||||||||| ||||| |||||| ||||| | ||||||||||||||    
T  6065439 tgtgtgtttggttatgcggtgataaaaattaaatttgatagaattgaatttaaaagaattaattttaaataaaagtgagttgt 6065357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 324
Target Start/End: Original strand, 32597863 - 32597945
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttgtg 324  Q
    ||||||||||||  |||||||| |||||||| ||||| | |||||| ||| | ||||||||||| | | ||||||||||||||    
T  32597863 gtgtgtttggttatgcggtggcaaaaattgagtttgagaaaattgattttgatagaattgatttcggtcaaaagtgagttgtg 32597945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 40742236 - 40742194
Alignment:
Q  280 agaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  40742236 agaattgagtttgagagaattgattttggttaaaagtgagttg 40742194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 13 - 66
Target Start/End: Original strand, 26632211 - 26632264
Alignment:
Q  13 tgaaaaagtgaatgttgaatggtgttgaatggtataaaccattggagatggtct 66  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||  ||||||||    
T  26632211 tgaaaaagtgggtgttgaatggtgttgaatggtgtaaaccattgaggatggtct 26632264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 245 - 306
Target Start/End: Original strand, 38152137 - 38152198
Alignment:
Q  245 tgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatttt 306  Q
    |||||||||||| || || || ||||||||||||||||||| ||||| ||| ||||||||||    
T  38152137 tgtttggtttggtggcggtgagaattgattttgatagaattaagtttgagaaaattgatttt 38152198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 240 - 291
Target Start/End: Complemental strand, 35615861 - 35615810
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagttt 291  Q
    |||| |||||||||  ||||||| || |||||||||||||||||||||||||    
T  35615861 gtgtctgtttggttcagcggtggagagaattgattttgatagaattgagttt 35615810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 237 - 284
Target Start/End: Original strand, 45147219 - 45147266
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaat 284  Q
    ||||||||||||||||| ||||| || || ||||||||||||||||||    
T  45147219 ttagtgtgtgtttggttcggcggcggtgagaattgattttgatagaat 45147266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 267 - 321
Target Start/End: Complemental strand, 8125095 - 8125041
Alignment:
Q  267 aattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||| | |||| |||||| ||||||||||||||| ||| |||||||||    
T  8125095 aattgattttggttgaatcgagtttgagagaattgattttggttagaagtgagtt 8125041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 306
Target Start/End: Original strand, 8702361 - 8702431
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatttt 306  Q
    |||||||| |||||||||   ||||||  ||||||||||||||||||||||| ||||  | ||||||||||    
T  8702361 tttagtgtatgtttggttctacggtggataaaattgattttgatagaattgactttagcaaaattgatttt 8702431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 26491085 - 26491003
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||| |||||||| | | |||||||| ||  | |||||| |||   ||||||||||||| ||||||||||||||    
T  26491085 gtgtgtgtttggtgtggcggtgactagaattgattctgtcaaaattgattttggtagaattgattttggttaaaagtgagttg 26491003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 63
Target Start/End: Original strand, 26749476 - 26749506
Alignment:
Q  33 ggtgttgaatggtataaaccattggagatgg 63  Q
    |||||||||||||||||||||||||||||||    
T  26749476 ggtgttgaatggtataaaccattggagatgg 26749506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 42
Target Start/End: Original strand, 8610039 - 8610068
Alignment:
Q  13 tgaaaaagtgaatgttgaatggtgttgaat 42  Q
    ||||||||||||||||||||||||||||||    
T  8610039 tgaaaaagtgaatgttgaatggtgttgaat 8610068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 14520300 - 14520263
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttga 278  Q
    |||||||||||||| |||||| ||||||||||||||||    
T  14520300 tgtgtgtttggttttgcggtgccgaaaattgattttga 14520263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 5212296 - 5212260
Alignment:
Q  32 tggtgttgaatggtataaaccattggagatggtctaa 68  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  5212296 tggtgttgaatggtaaaaaccattggggatggtctaa 5212260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 32 - 68
Target Start/End: Complemental strand, 5735292 - 5735256
Alignment:
Q  32 tggtgttgaatggtataaaccattggagatggtctaa 68  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  5735292 tggtgttgaatggtaaaaaccattggggatggtctaa 5735256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 24297547 - 24297631
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||  ||||||   |||||| |||||||||||||||| ||| |  |||||||||   || ||||||||||||    
T  24297547 tagtgtgtgtttggttctgcggtgataaaaattaattttgatagaattgattttgaatgaattgattcgaatcaaaagtgagttg 24297631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 239 - 287
Target Start/End: Complemental strand, 39219859 - 39219811
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattga 287  Q
    |||||||||||||||  |||||||  |||||| ||||||||||||||||    
T  39219859 agtgtgtgtttggttgtgcggtggaaaaaattaattttgatagaattga 39219811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 1e-29; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 13739350 - 13739268
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  13739350 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 13739268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 13744850 - 13744768
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| |||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||||||||||||    
T  13744850 agtgtgtgtttggtatggcggtggcgagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagtt 13744768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 321
Target Start/End: Original strand, 33898960 - 33899043
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||||| | ||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  33898960 tagtgtgtgtttggtatagcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt 33899043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 236 - 321
Target Start/End: Original strand, 29409204 - 29409289
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||| |||||| || |||||||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||    
T  29409204 tttagtgtgtttttggtatgacggtggcgaaaattgattttaatagaattgagtttgaaagaattgattttgattaaaagtgagtt 29409289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 6208019 - 6208102
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||| | |||||||||| ||||||||||||||||||||| ||| || |||||||||||||||||||||||||||    
T  6208019 agtgtgtgtttggtatagcggtggcgataattgattttgatagaattgattttgagtgaattgattttgattaaaagtgagttg 6208102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 32599418 - 32599501
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||| |||| |  ||| || ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32599418 agtgtgtgtttgatttgacattggtgagaattgattttgatagaattgaatttaagagaattgattttgattaaaagtgagttg 32599501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 10826235 - 10826153
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||||| || || |||| ||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  10826235 gtgtgtgtttggtttggcggcggtgagaattaattttgataaaattgagtttgagagaattgattttggttaaaagtgagttg 10826153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 236 - 322
Target Start/End: Original strand, 21254832 - 21254918
Alignment:
Q  236 tttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||||   |||||| || |||||| |||||||||||||||||| |||||||||| |||||||||||||||||||    
T  21254832 tttagtgtgtgtttggttccacggtggtgataattgagtttgatagaattgagtttgagagaattgaatttgattaaaagtgagttg 21254918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 242 - 322
Target Start/End: Original strand, 17829957 - 17830037
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||| | || |||| || ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  17829957 gtgtgtttggtatagctgtggggagaattgattttgatagaattgagtttgagagaattgattttggttaaaagtgagttg 17830037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 1312395 - 1312478
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  ||||||| ||||||||||||||||||||| |||||| | | ||||||||||| ||||||||||||||    
T  1312395 agtgtgtgtttggttcagcggtggagaaaattgattttgatagaatcgagtttgataaaattgattttggttaaaagtgagttg 1312478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 237 - 321
Target Start/End: Original strand, 5584003 - 5584087
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||| ||||  |||||| ||| ||||||||||||||||||||| ||| | |||||||||||||| ||||||||||||    
T  5584003 ttagtgtgtgttaggttctgcggtgacgagaattgattttgatagaattgattttgacagaattgattttgactaaaagtgagtt 5584087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 240 - 307
Target Start/End: Original strand, 29399750 - 29399817
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttg 307  Q
    |||| |||||||||||||||||| || ||||||||||||||||||||||||| | |||||||||||||    
T  29399750 gtgtatgtttggtttggcggtggagagaattgattttgatagaattgagtttgatagaattgattttg 29399817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 15151461 - 15151543
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||||  ||||||   | ||||||||||||||||||||||||| || |||||||||||| ||| |||||||||    
T  15151461 agtgtgtgtttggttctgcggtgagtagaattgattttgatagaattgagtttgagtgaattgattttggttagaagtgagtt 15151543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 241 - 322
Target Start/End: Complemental strand, 31132606 - 31132525
Alignment:
Q  241 tgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| | ||||||||||| ||| ||||||||||||||||||||||||| ||| |||| ||||||  ||||| |||||||    
T  31132606 tgtgtgtatagtttggcggtgacgataattgattttgatagaattgagtttgagataatttattttggctaaaaatgagttg 31132525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 322
Target Start/End: Original strand, 3605708 - 3605790
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  | |||||  |||||||||||||||| |||||| |||   ||||||||||||||||||||||||||||    
T  3605708 agtgtgtgtttggttgtgtggtggacaaaattgattttgatataattgattttgt-agaattgattttgattaaaagtgagttg 3605790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 26274581 - 26274666
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||||  ||||   ||| ||||||||||||||||||||| ||| | | |||||||| ||| |||||||||||||    
T  26274581 ttagtgtgtgtttggttctgcggcaacgagaattgattttgatagaattgattttgacataattgattctgactaaaagtgagttg 26274666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 306
Target Start/End: Complemental strand, 699698 - 699634
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgatttt 306  Q
    ||||||||| || |||||||| |  ||||||||||||||||||||||||| | ||||||||||||    
T  699698 gtgtgtttgattcggcggtggagggaattgattttgatagaattgagtttgaaagaattgatttt 699634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 242 - 318
Target Start/End: Original strand, 16121960 - 16122036
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtga 318  Q
    |||| |||||| |||||||||  | |||||||||||||| |||||| ||| | ||||||||||||| ||||||||||    
T  16121960 gtgtctttggtatggcggtggttataattgattttgataaaattgattttgatagaattgattttggttaaaagtga 16122036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 242 - 292
Target Start/End: Original strand, 16442324 - 16442374
Alignment:
Q  242 gtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagttta 292  Q
    ||||||||||||||||||||| || |||||||||||| |||||||| ||||    
T  16442324 gtgtgtttggtttggcggtggggagaattgattttgagagaattgatttta 16442374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 8551047 - 8551131
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||| ||||||||||||  | |||||  | ||||||||||||||||||||| ||  | | |||||||| |||||||||||||||||    
T  8551047 ttagcgtgtgtttggttgtgtggtggatataattgattttgatagaattga-ttccatataattgattctgattaaaagtgagttg 8551131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 21456027 - 21455942
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||| ||||| ||||  ||||| ||  |||||||||||||| ||||||||||   ||||||||||||  |||||||| |||||    
T  21456027 ttagtgtatgtttagtttaacggtgacgggaattgattttgatataattgagtttgtaagaattgattttagttaaaagtaagttg 21455942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 243 - 283
Target Start/End: Complemental strand, 32457444 - 32457404
Alignment:
Q  243 tgtgtttggtttggcggtggcgaaaattgattttgatagaa 283  Q
    ||||||||||||| |||  ||||||||||||||||||||||    
T  32457444 tgtgtttggtttgacggaagcgaaaattgattttgatagaa 32457404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 238 - 321
Target Start/End: Complemental strand, 9256 - 9173
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| |||||||||| ||||||||| || ||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  9256 tagtatgtgtttggtatggcggtggtgagaattgattttgatagaattgagtttgagagaattgattttgattaaaagtgagtt 9173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 237 - 322
Target Start/End: Complemental strand, 253275 - 253190
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||| ||||| || || ||||||||||||||||||||||||| ||||||||||||||| ||||| ||||||||    
T  253275 ttagtgtgtgtttggttgggcggcggagagaattgattttgatagaattgagtttgagagaattgattttggttaaatgtgagttg 253190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 56; Significance: 4e-23; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 230 - 321
Target Start/End: Original strand, 1974 - 2065
Alignment:
Q  230 atttgttttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| ||||||||||||||||| ||||||||| ||| ||||||||||||||||||||||||| | ||||||||||||| || ||| ||||||    
T  1974 atttattttagtgtgtgtttggattggcggtgtcgataattgattttgatagaattgagtttgaaagaattgattttggttcaaaatgagtt 2065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0983 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0983
Description:

Target: scaffold0983; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 240 - 321
Target Start/End: Original strand, 2225 - 2306
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||| |||||||| ||||||||||||||||||||||||| |||||||||||| | | ||||||||||| |||||||||||||    
T  2225 gtgtctgtttggtatggcggtggcgaaaattgattttgacagaattgagtttgacataattgattttggttaaaagtgagtt 2306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0394 (Bit Score: 54; Significance: 6e-22; HSPs: 1)
Name: scaffold0394
Description:

Target: scaffold0394; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 237 - 322
Target Start/End: Original strand, 5784 - 5869
Alignment:
Q  237 ttagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||| ||| ||| | || |||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||    
T  5784 ttagtgtgtgtttggtatggtggtagggagaattgattttgatataattgagtttgagagaattgattttggttaaaagtgagttg 5869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 239 - 321
Target Start/End: Complemental strand, 8594 - 8512
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    |||||||||||||| |||||||||  | ||||||||||||||||||||||||| | | ||||||||||| |||||||||||||    
T  8594 agtgtgtgtttggtatggcggtgggaataattgattttgatagaattgagtttgatataattgattttggttaaaagtgagtt 8512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 240 - 322
Target Start/End: Original strand, 29080 - 29162
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||| |||||  | ||||||||||||||||||| ||||| | ||||||||||||| ||||||||||||||    
T  29080 gtgtgtgtttggtttggtggtggtaataattgattttgatagaattaagtttgaaagaattgattttggttaaaagtgagttg 29162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0172 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0172
Description:

Target: scaffold0172; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 238 - 322
Target Start/End: Original strand, 15213 - 15296
Alignment:
Q  238 tagtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    ||||||||||||||||  |||||| ||||||||||||||||||||||||| |||   | ||||||||||| ||||||||||||||    
T  15213 tagtgtgtgtttggttgtgcggtgacgaaaattgattttgatagaattgattttgtca-aattgattttggttaaaagtgagttg 15296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 240 - 322
Target Start/End: Complemental strand, 46906 - 46824
Alignment:
Q  240 gtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagttg 322  Q
    |||||||||||||||  | |||||||||||||||||||| | |||||| ||| | |||||||||||||  |||||||||||||    
T  46906 gtgtgtgtttggttttccagtggcgaaaattgattttgacataattgattttgatagaattgattttgcctaaaagtgagttg 46824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 239 - 321
Target Start/End: Original strand, 118366 - 118448
Alignment:
Q  239 agtgtgtgtttggtttggcggtggcgaaaattgattttgatagaattgagtttaagagaattgattttgattaaaagtgagtt 321  Q
    ||||||||||||| ||||||||||    ||||||||||||| ||||||||||| | ||||| ||||||  |||||||||||||    
T  118366 agtgtgtgtttggattggcggtgggaggaattgattttgatcgaattgagtttgatagaatagatttttgttaaaagtgagtt 118448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 30596 - 30648
Alignment:
Q  13 tgaaaaagtgaatgttgaatggtgttgaatggtataaaccattggagatggtc 65  Q
    |||||||||| |||||||||||||||||||||  | ||||||||| |||||||    
T  30596 tgaaaaagtggatgttgaatggtgttgaatgggtttaaccattggggatggtc 30648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University