View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7709_high_9 (Length: 281)
Name: NF7709_high_9
Description: NF7709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7709_high_9 |
 | |
|
| [»] scaffold0051 (1 HSPs) |
| | |
|
| [»] scaffold0897 (1 HSPs) |
| | |
|
| [»] scaffold0108 (1 HSPs) |
| | |
|
| [»] scaffold0064 (1 HSPs) |
| | |
|
| [»] scaffold0022 (1 HSPs) |
| | |
|
| [»] scaffold0040 (1 HSPs) |
| | |
|
| [»] scaffold0304 (2 HSPs) |
| | |
|
| [»] scaffold0319 (2 HSPs) |
| | |
|
Alignment Details
Target: chr1 (Bit Score: 222; Significance: 1e-122; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 5 - 274
Target Start/End: Original strand, 22080973 - 22081242
Alignment:
| Q |
5 |
agacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagc |
104 |
Q |
| |
|
||||||||| |||| |||| ||||| |||||||||||| ||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22080973 |
agacgaagcggaaacgggtatccccgcctgttatctccctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaagagttcagc |
22081072 |
T |
|
| Q |
105 |
agtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacg |
204 |
Q |
| |
|
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
|
|
| T |
22081073 |
agtatcaggtgtgataccatcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagaaaacctttgacg |
22081172 |
T |
|
| Q |
205 |
gtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacatatgatgtccat |
274 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
22081173 |
gtaggaatgcatggctcaatatccaacataaattgggtacatctcaaaatgcaaaacatatgatgtccat |
22081242 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 120 - 274
Target Start/End: Complemental strand, 41375500 - 41375346
Alignment:
| Q |
120 |
accgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggtaggaatgcatggc |
219 |
Q |
| |
|
||||| |||||||||||||||||| |||||||| || ||||||||||| ||||| ||||| || ||||| ||||| |||| ||||||||||||||| ||| |
|
|
| T |
41375500 |
accgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcgtccatagcattcttcagcaagccttggacggtaggaatgcagggc |
41375401 |
T |
|
| Q |
220 |
tcaatatccaacatgaattgggtacatctcaaaatgcagaacatatgatgtccat |
274 |
Q |
| |
|
||| |||| |||||| |||||||| |||||||||||||||||||||||||||| |
|
|
| T |
41375400 |
tcagggtccagcatgaactgggtacacctcaaaatgcagaacatatgatgtccat |
41375346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 64
Target Start/End: Complemental strand, 41375593 - 41375531
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttc |
64 |
Q |
| |
|
|||| ||||||| |||| |||||||||| ||||||||||| ||||||||||| |||| |||| |
|
|
| T |
41375593 |
ctgaaacgaagcggaaacgggtgtccccgcctgttatctctctgcgatagcgcgcgacgtttc |
41375531 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0051 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: scaffold0051
Description:
Target: scaffold0051; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 2 - 268
Target Start/End: Original strand, 74433 - 74699
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||||||||||| ||| ||||||||||||||||||||||| ||||||||||| | |||||| | ||||||||||||||||| || |||| |||||||| |
|
|
| T |
74433 |
ctgagacgaagcgaaaacgggtgtcccctcctgttatctccctgcgatagcgcgcaacatttttcgtctccaaaagagaccaaaactcattgaagagttc |
74532 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
||| ||||||| ||||||||||||||| || |||| || ||| || ||||| |||||||||||||||||||||||||| ||||||||||||||| ||| |
|
|
| T |
74533 |
agcggtatcaggtgtgataccgtcaagtgctctcaccattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcttaagcaaatgcttg |
74632 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacatatgat |
268 |
Q |
| |
|
|||||||||||||||||||||| ||| | |||||||||||| |||||||||||||| |||||||||| |
|
|
| T |
74633 |
acggtaggaatgcatggctcaacatctagcatgaattgggtgcatctcaaaatgcaaaacatatgat |
74699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 143; Significance: 4e-75; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 2 - 263
Target Start/End: Complemental strand, 18166807 - 18166545
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttctt-gtctccaaaagagaccagaaatcatgaaagagtt |
100 |
Q |
| |
|
|||||||||||| |||||||| ||||||||||||||||||| ||||||| ||| | |||||| || ||||||||||||||||| || |||| ||||||| |
|
|
| T |
18166807 |
ctgagacgaagcggaaatgggagtcccctcctgttatctccctgcgataacgcgcaacatttttttgtctccaaaagagaccaaaagtcattgaagagtt |
18166708 |
T |
|
| Q |
101 |
cagcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaaccttt |
200 |
Q |
| |
|
|||| ||||||| ||||||||||||||||| ||||||| ||| || ||||| |||||||||||||||||||||||||| |||||| ||||||||| || |
|
|
| T |
18166707 |
cagcggtatcaggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcctaagcaaacgctt |
18166608 |
T |
|
| Q |
201 |
gacggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
||||||||||||||||||||||| ||||| ||||||||| || |||||||||||||| ||||| |
|
|
| T |
18166607 |
gacggtaggaatgcatggctcaacatccagcatgaattgagtgcatctcaaaatgcaaaacat |
18166545 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 2 - 274
Target Start/End: Complemental strand, 14329171 - 14328899
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| ||||||| |||| |||||||| | || ||||| || ||||||||||| |||| |||| |||||||||||||||||||||||||||||| ||| |
|
|
| T |
14329171 |
ctgaaacgaagcggaaacgggtgtccacacccgttatgtctctgcgatagcgcgcgacgtttcgtgtctccaaaagagaccagaaatcatgaaaaagtgt |
14329072 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
||| | ||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| |||||||||| | |
|
|
| T |
14329071 |
agcggcatcaggtgtgataccgtcaagcgccctcagcagtacgtcgaagtacagagcggtcacagagccagcatccatggcattcttcagcaaaccttag |
14328972 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacatatgatgtccat |
274 |
Q |
| |
|
| |||||| ||||| |||||| |||| |||||| |||||||| ||||||||||||||||| |||||||||| |
|
|
| T |
14328971 |
atggtagggatgcagggctcagggtccagcatgaactgggtacacctcaaaatgcagaacatgtgatgtccat |
14328899 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 134; Significance: 8e-70; HSPs: 4)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 134; E-Value: 8e-70
Query Start/End: Original strand, 2 - 263
Target Start/End: Complemental strand, 23196029 - 23195768
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
||||||| |||| |||||||| |||||||||| |||||||| ||||||| ||| | |||||| ||||||||||||||||||| || |||| |||||||| |
|
|
| T |
23196029 |
ctgagacaaagcggaaatgggagtcccctcctattatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaagagttc |
23195930 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
||| ||||||| ||||||||||||||||| ||||||| ||| || ||||| |||||||||||||||||||||||||| | |||| ||||||||| ||| |
|
|
| T |
23195929 |
agcggtatcaggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagtgttcctaagcaaacacttg |
23195830 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|||||||||||||||||||||| |||| ||||||||| || |||||||||||||| ||||| |
|
|
| T |
23195829 |
acggtaggaatgcatggctcaacgtccagcatgaattgagtgcatctcaaaatgcaaaacat |
23195768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 7 - 263
Target Start/End: Complemental strand, 23621628 - 23621372
Alignment:
| Q |
7 |
acgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagcag |
106 |
Q |
| |
|
||||||| |||||||| ||||||||||||||||||| ||||||| ||| | |||||| ||||||||||||||||||| || ||| ||||||||||| | |
|
|
| T |
23621628 |
acgaagcggaaatgggagtcccctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcaatgaagagttcagcgg |
23621529 |
T |
|
| Q |
107 |
tatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggt |
206 |
Q |
| |
|
| |||| ||||||||||||||||| ||||||| ||| || ||||| |||||||||||||||||||||||||| || ||| ||||||||| ||| ||||| |
|
|
| T |
23621528 |
tgtcaggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcattcctaagcaaacgtttaacggt |
23621429 |
T |
|
| Q |
207 |
aggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
||||||||||||||||||||| | ||||||||| || ||||||||||| || ||||| |
|
|
| T |
23621428 |
aggaatgcatggctcaatatctagcatgaattgagtgcatctcaaaatacaaaacat |
23621372 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 46 - 274
Target Start/End: Original strand, 24954749 - 24954977
Alignment:
| Q |
46 |
cgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagcagtatcagatgtgataccgtcaagcgccctcagcagtacgt |
145 |
Q |
| |
|
||||| ||| |||| |||| |||||||| ||||||||||||||||||||| ||| ||| | ||||| |||||||||||||||||||||||||||||||| |
|
|
| T |
24954749 |
cgatatcgcgcgacgtttcgtgtctccagaagagaccagaaatcatgaaaaagtgtagcggcatcaggtgtgataccgtcaagcgccctcagcagtacgt |
24954848 |
T |
|
| Q |
146 |
cgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggtaggaatgcatggctcaatatccaacatgaattgggtaca |
245 |
Q |
| |
|
||||||| |||||||||||||| |||||||||||||| ||||| ||||| |||| || |||||| ||||| |||||| ||||||||||| |||||||| |
|
|
| T |
24954849 |
cgaagtacagagcggtcacagagccagcatccatggcattcttcagcaagccttggatggtagggatgcaaggctcagggtccaacatgaactgggtaca |
24954948 |
T |
|
| Q |
246 |
tctcaaaatgcagaacatatgatgtccat |
274 |
Q |
| |
|
||||||||||||||||| || ||||||| |
|
|
| T |
24954949 |
cctcaaaatgcagaacatgtgttgtccat |
24954977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 5 - 263
Target Start/End: Original strand, 22643326 - 22643583
Alignment:
| Q |
5 |
agacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagc |
104 |
Q |
| |
|
|||||||| |||||||| |||||||||||| ||||| ||||||| || | |||||| ||||||||||||||||||| || |||| ||||||||||| |
|
|
| T |
22643326 |
agacgaagtggaaatgggactcccctcctgttgtctccctgcgataatgcgcaacattttttgtctccaaaagagaccaaaagtcattgaagagttcagc |
22643425 |
T |
|
| Q |
105 |
agtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacg |
204 |
Q |
| |
|
|||||| | |||||||||||||||| ||||||| ||| || ||||| ||||||||||||||||||||||||||||||||| ||||||||| ||||| |
|
|
| T |
22643426 |
ggtatcaaaa-tgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatggcgttcctaagcaaacgcttgaca |
22643524 |
T |
|
| Q |
205 |
gtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|||||||||||||||||| ||||| ||||||||| || |||||||||||||| ||||| |
|
|
| T |
22643525 |
ataggaatgcatggctcaacatccagcatgaattgagtgcatctcaaaatgcaaaacat |
22643583 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0897 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: scaffold0897
Description:
Target: scaffold0897; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 3 - 263
Target Start/End: Complemental strand, 4022 - 3762
Alignment:
| Q |
3 |
tgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttca |
102 |
Q |
| |
|
|||||| ||||||||||||| |||||||||||||||||| ||||||| ||| | |||||| ||||||||||||||||||| || |||| ||||||||| |
|
|
| T |
4022 |
tgagacaaagcagaaatgggaatcccctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaagagttca |
3923 |
T |
|
| Q |
103 |
gcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttga |
202 |
Q |
| |
|
|| ||||||| ||||| ||||| ||||| ||||||| ||| || ||||| |||||||||||||||||||||||||||||||||||||||| || |||| |
|
|
| T |
3922 |
gcggtatcaggagtgatgccgtcgagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatggcgttcttaagcagacgcttga |
3823 |
T |
|
| Q |
203 |
cggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|||||||||||||||||||| ||||| |||||||| || |||||||||||||| ||||| |
|
|
| T |
3822 |
tggtaggaatgcatggctcaacatccagcatgaattaagtgcatctcaaaatgcaaaacat |
3762 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 129; Significance: 8e-67; HSPs: 4)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 129; E-Value: 8e-67
Query Start/End: Original strand, 2 - 274
Target Start/End: Complemental strand, 14688640 - 14688368
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| ||||||| |||| |||||||||| || ||||| || ||||||||||| |||| ||||||||||||||||||||||| ||||||||||| ||| |
|
|
| T |
14688640 |
ctgaaacgaagcggaaacgggtgtccccgcccgttatatctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccaaaaatcatgaaaaagtgt |
14688541 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
||| ||||||| ||||||||||||||||||||||||||| |||||||| || || ||||||||||| |||||||||||||| ||||| | |||||||| | |
|
|
| T |
14688540 |
agcggtatcaggtgtgataccgtcaagcgccctcagcagcacgtcgaaatacagggcggtcacagagccagcatccatggcattcttcaacaaaccttgg |
14688441 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacatatgatgtccat |
274 |
Q |
| |
|
| |||||| ||||| |||||| |||| |||||| ||||| || ||||||||||||||||| |||||||||| |
|
|
| T |
14688440 |
atggtagggatgcagggctcagggtccagcatgaactgggtgcacctcaaaatgcagaacatgtgatgtccat |
14688368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 21 - 274
Target Start/End: Complemental strand, 7360623 - 7360370
Alignment:
| Q |
21 |
ggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagcagtatcagatgtgata |
120 |
Q |
| |
|
||||||| | |||||||| || | ||||||||| |||| |||| |||||||||||||||| ||||||||||||| ||| |||| | ||||| ||||| | |
|
|
| T |
7360623 |
ggtgtccacgcctgttatgtctctacgatagcgcgcgacgtttcgtgtctccaaaagagacaagaaatcatgaaaaagtgcagcggcatcaggtgtgaca |
7360524 |
T |
|
| Q |
121 |
ccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggtaggaatgcatggct |
220 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||| ||||| | ||||||| || |||||| | ||| |||| |
|
|
| T |
7360523 |
ccgtcaagcgccctcagcagtacgtcgaagtacagagcggtcacagagccagcatccatggcattcttcaagaaaccttggatggtagggacgcagggct |
7360424 |
T |
|
| Q |
221 |
caatatccaacatgaattgggtacatctcaaaatgcagaacatatgatgtccat |
274 |
Q |
| |
|
|| ||||| |||||| |||||||| ||||||||||||||||| || ||||||| |
|
|
| T |
7360423 |
caggatccagcatgaactgggtacacctcaaaatgcagaacatgtggtgtccat |
7360370 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 2 - 274
Target Start/End: Original strand, 10787153 - 10787425
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| ||||||| |||| |||||||||| ||||||||||| ||||||||||| | || ||| ||||||||||||||||||||||||||||||| ||| |
|
|
| T |
10787153 |
ctgaaacgaagcggaaacgggtgtccccgcctgttatctctctgcgatagcgcgcaacgttttttgtctccaaaagagaccagaaatcatgaaaaagtct |
10787252 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
||| | |||| | ||| ||||| |||||||||||||||||| |||||||| || ||||||||||| ||||| ||||| || |||| | ||| |||| | |
|
|
| T |
10787253 |
agcggaatcaagtctgacaccgttaagcgccctcagcagtacatcgaagtacagggcggtcacagagccagcgtccatagcattctgcaacaagccttgg |
10787352 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacatatgatgtccat |
274 |
Q |
| |
|
|||||||||||||| |||||| || | |||||| |||||||| |||| |||||||||||| |||||||||| |
|
|
| T |
10787353 |
acggtaggaatgcagggctcagggtctagcatgaactgggtacacctcagaatgcagaacatgtgatgtccat |
10787425 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 2 - 263
Target Start/End: Original strand, 10157934 - 10158195
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| ||||||| || |||| ||||||||| ||||||||| ||||||| ||| | ||||| | ||||||||||||||||| || |||| || ||||| |
|
|
| T |
10157934 |
ctgaaacgaagcgaaagtgggagtcccctcccgttatctccctgcgataacgcgcaacattcttcgtctccaaaagagaccaaaagtcattgaaaagttc |
10158033 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
|| |||||| | |||||||||||||||||||| || ||| || ||||| || ||| |||| || ||| ||||||| || ||||| ||| || ||| |
|
|
| T |
10158034 |
agttatatcaggagagataccgtcaagcgccctcaacattacatcaaagtaaagcgcgctcacggagccatcatccatagcattcttgagcgaatacttg |
10158133 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|| ||||||||||||||||||| ||| | |||| ||| |||||||||||||| || ||||| |
|
|
| T |
10158134 |
acagtaggaatgcatggctcaacatctagcatgtgttgagtacatctcaaaatacaaaacat |
10158195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0108 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0108
Description:
Target: scaffold0108; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 263
Target Start/End: Original strand, 38916 - 39170
Alignment:
| Q |
9 |
gaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagcagta |
108 |
Q |
| |
|
||||| |||||||| ||| ||||| |||||||| ||||||| ||| | |||||| | ||||||||||||||||| || |||| || |||||||| ||| |
|
|
| T |
38916 |
gaagcggaaatgggaatcctctcctattatctccctgcgataacgcgcaacatttttcgtctccaaaagagaccaaaagtcattgaaaagttcagcggta |
39015 |
T |
|
| Q |
109 |
tcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggtag |
208 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| ||| || ||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |
|
|
| T |
39016 |
tcaggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcctaagcaaacgtttgacggtag |
39115 |
T |
|
| Q |
209 |
gaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
||||||||||||| | ||||||||||||||| || |||||||||||||| ||||| |
|
|
| T |
39116 |
gaatgcatggctcgacatccaacatgaattgagtgcatctcaaaatgcaaaacat |
39170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0064 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0064
Description:
Target: scaffold0064; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 9 - 263
Target Start/End: Complemental strand, 32822 - 32568
Alignment:
| Q |
9 |
gaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagcagta |
108 |
Q |
| |
|
||||| |||||||| ||| ||||| |||||||| ||||||| ||| | |||||| | ||||||||||||||||| || |||| || |||||||| ||| |
|
|
| T |
32822 |
gaagcggaaatgggaatcctctcctattatctccctgcgataacgcgcaacatttttcgtctccaaaagagaccaaaagtcattgaaaagttcagcggta |
32723 |
T |
|
| Q |
109 |
tcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggtag |
208 |
Q |
| |
|
|||| ||||||||||||||||| ||||||| ||| || ||||| |||||||||||||||||||||||||| |||||| ||||||||| ||||||||||| |
|
|
| T |
32722 |
tcaggagtgataccgtcaagcgctctcagcattacatcaaagtaaagagcggtcacagaaccagcatccatagcgttcctaagcaaacgtttgacggtag |
32623 |
T |
|
| Q |
209 |
gaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
||||||||||||| | ||||||||||||||| || |||||||||||||| ||||| |
|
|
| T |
32622 |
gaatgcatggctcgacatccaacatgaattgagtgcatctcaaaatgcaaaacat |
32568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 117; Significance: 1e-59; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 2 - 274
Target Start/End: Original strand, 1729971 - 1730243
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| ||||||| |||| |||||||||| ||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
1729971 |
ctgaaacgaagcggaaacgggtgtccccgcctgttatctctctgcgatagcgcgcgacgtttcttgtctccaaaagagaccagaaatcatgaaaaagtct |
1730070 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
||| | |||| | ||| | ||| |||| ||||||||||||| |||||||| || ||||||||||| ||||| ||||| || ||||| |||||||||| | |
|
|
| T |
1730071 |
agcggaatcaagtctgacatcgttaagcaccctcagcagtacatcgaagtacagggcggtcacagagccagcgtccatagcattcttcagcaaaccttgg |
1730170 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacatatgatgtccat |
274 |
Q |
| |
|
||||||||||| || |||||| | || |||||| || ||||| |||||||||||||||||||||||||||| |
|
|
| T |
1730171 |
acggtaggaatacagggctcagggtacagcatgaactgagtacacctcaaaatgcagaacatatgatgtccat |
1730243 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0022 (Bit Score: 106; Significance: 4e-53; HSPs: 1)
Name: scaffold0022
Description:
Target: scaffold0022; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 2 - 263
Target Start/End: Original strand, 28618 - 28879
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| ||||||| ||||||| ||||||||||||||||||| ||||||| ||| | |||||| | ||||||||||||||||| || ||| |||||||| |
|
|
| T |
28618 |
ctgaaacgaagcgaaaatgggagtcccctcctgttatctccctgcgataacgcgcaacatttttcgtctccaaaagagaccaaaagtcaatgaagagttc |
28717 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||||| ||| || ||||| |||||| | ||||| ||||| ||||| |||||| ||||||||| ||| |
|
|
| T |
28718 |
agtggtatcatgagtgataccgtcaagcgccctcagcattacatcaaagtaaagagcgcttacagagccagcgtccatagcgttcctaagcaaacgcttg |
28817 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|||||||||||||||||||||| ||| | ||||||||| || ||||||||||| || ||||| |
|
|
| T |
28818 |
acggtaggaatgcatggctcaacatctagcatgaattgagtgcatctcaaaatacaaaacat |
28879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 98; Significance: 3e-48; HSPs: 3)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 2 - 263
Target Start/End: Complemental strand, 14562410 - 14562149
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| ||||||| |||||||| ||||||||| |||||||| ||||||| ||| | |||||| | ||||||||||||||||| || |||| || ||||| |
|
|
| T |
14562410 |
ctgaaacgaagcggaaatgggaatcccctcctattatctccctgcgataacgcgcaacatttttcgtctccaaaagagaccaaaagtcattgaaaagttc |
14562311 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
|| | ||||| ||||||||||||| ||||||||||| ||| || ||||| |||||| ||||||| ||||| ||||| || ||| ||||||||| ||| |
|
|
| T |
14562310 |
agtggcatcaggagtgataccgtcaatcgccctcagcattacatcaaagtaaagagcgctcacagagccagcgtccatagcattcctaagcaaacgcttg |
14562211 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|||||||||||||||||||||| ||||| |||| ||| |||||||||||||| || ||||| |
|
|
| T |
14562210 |
acggtaggaatgcatggctcaacatccagcatgtgttgagtacatctcaaaatacaaaacat |
14562149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 263
Target Start/End: Complemental strand, 13284552 - 13284291
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| ||||||| |||| || ||||||||| ||||||||| ||||||| || | ||||| | ||||||||||||||||| || |||| |||||||| |
|
|
| T |
13284552 |
ctgaaacgaagcgaaaataggagtcccctcccgttatctccctgcgataacgagcaacattcttcgtctccaaaagagaccaaaagtcattgaagagttc |
13284453 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
|| ||||||| ||||||||||||||||||||||||| ||| || ||||| |||||| ||||||| ||||| ||||| |||||| ||||||||| ||| |
|
|
| T |
13284452 |
agtggtatcaggagtgataccgtcaagcgccctcagcattacatcaaagtaaagagcgctcacagagccagcgtccatagcgttcctaagcaaacgcttg |
13284353 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|||||||||||||||||||||| ||| | |||| ||| || ||||||||||| || ||||| |
|
|
| T |
13284352 |
acggtaggaatgcatggctcaacatctagcatgtgttgagtgcatctcaaaatacaaaacat |
13284291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 194
Target Start/End: Complemental strand, 14742018 - 14741948
Alignment:
| Q |
124 |
tcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaa |
194 |
Q |
| |
|
|||||||||||||||| || || |||||||| ||| ||||||| ||||||||||| ||||| ||||||| |
|
|
| T |
14742018 |
tcaagcgccctcagcatgacatcaaagtagagcgcgctcacagagccagcatccatagcgtttctaagcaa |
14741948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0040 (Bit Score: 94; Significance: 6e-46; HSPs: 1)
Name: scaffold0040
Description:
Target: scaffold0040; HSP #1
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 2 - 223
Target Start/End: Original strand, 35983 - 36204
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| ||||||| || |||| ||||||||||||||||||| ||||||| ||| | ||||| |||||||||||||||||||||| |||| |||||||| |
|
|
| T |
35983 |
ctgaaacgaagcgaaagtgggagtcccctcctgttatctccctgcgataacgcgcaacattctttgtctccaaaagagaccagaagtcattgaagagttc |
36082 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
|| |||||| ||||||||||||||||||||||||| ||| || ||||| |||||| | || |||||||| ||||| || ||| ||||||||| |||| |
|
|
| T |
36083 |
agtgatatcaggagtgataccgtcaagcgccctcagcattacatcaaagtaaagagcgtttacggaaccagcgtccatagcattcctaagcaaacgtttg |
36182 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaa |
223 |
Q |
| |
|
|| ||||||||||||||||||| |
|
|
| T |
36183 |
acagtaggaatgcatggctcaa |
36204 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: scaffold0304
Description:
Target: scaffold0304; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 263
Target Start/End: Complemental strand, 12452 - 12199
Alignment:
| Q |
10 |
aagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagcagtat |
109 |
Q |
| |
|
||||||||||||| || ||||||||||||||| ||||||| ||| | |||||| ||||||||||||||||||| || |||| || ||||||| |||| |
|
|
| T |
12452 |
aagcagaaatgggaatcgcctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaaaagttcagtggtat |
12353 |
T |
|
| Q |
110 |
cagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggtagg |
209 |
Q |
| |
|
||| |||||| |||||||||||||||||| ||| | ||||| |||||| ||||||| ||||| ||||| || ||| |||| |||| |||| |||||| |
|
|
| T |
12352 |
caggagtgatatcgtcaagcgccctcagcattacatgaaagtaaagagcgctcacagagccagcgtccatagcattcctaagaaaacgcttgatggtagg |
12253 |
T |
|
| Q |
210 |
aatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|||||||||||||| ||||| |||| ||| || ||||||||||| || ||||| |
|
|
| T |
12252 |
aatgcatggctcaacatccagcatgtgttgagtgcatctcaaaatacaaaacat |
12199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0304; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 263
Target Start/End: Complemental strand, 18203 - 17950
Alignment:
| Q |
10 |
aagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagcagtat |
109 |
Q |
| |
|
||||||||||||| || ||||||||||||||| ||||||| ||| | |||||| ||||||||||||||||||| || |||| || ||||||| |||| |
|
|
| T |
18203 |
aagcagaaatgggaatcgcctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaaaagttcagtggtat |
18104 |
T |
|
| Q |
110 |
cagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggtagg |
209 |
Q |
| |
|
||| |||||| |||||||||||||||||| ||| | ||||| |||||| ||||||| ||||| ||||| || ||| |||| |||| |||| |||||| |
|
|
| T |
18103 |
caggagtgatatcgtcaagcgccctcagcattacatgaaagtaaagagcgctcacagagccagcgtccatagcattcctaagaaaacgcttgatggtagg |
18004 |
T |
|
| Q |
210 |
aatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|||||||||||||| ||||| |||| ||| || ||||||||||| || ||||| |
|
|
| T |
18003 |
aatgcatggctcaacatccagcatgtgttgagtgcatctcaaaatacaaaacat |
17950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319 (Bit Score: 82; Significance: 9e-39; HSPs: 2)
Name: scaffold0319
Description:
Target: scaffold0319; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 2 - 263
Target Start/End: Original strand, 19401 - 19662
Alignment:
| Q |
2 |
ctgagacgaagcagaaatgggtgtcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttc |
101 |
Q |
| |
|
|||| |||||| |||||||| |||||||||||||||||| ||||||| ||| | |||||| ||||||||||||||||||| || |||| || ||||| |
|
|
| T |
19401 |
ctgaaacgaagtggaaatgggaatcccctcctgttatctccctgcgataacgcgcaacattttttgtctccaaaagagaccaaaagtcattgaaaagttc |
19500 |
T |
|
| Q |
102 |
agcagtatcagatgtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttg |
201 |
Q |
| |
|
|| | ||||| ||||||||||||| |||| |||| | ||| || ||||| |||||| ||||||| ||||| ||||| || || ||||||||| ||| |
|
|
| T |
19501 |
agtggcatcaggagtgataccgtcaatcgccatcagaattacatcaaagtaaagagcgctcacagagccagcgtccatagcatttctaagcaaacgcttg |
19600 |
T |
|
| Q |
202 |
acggtaggaatgcatggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
|||||| ||||||||||||||| ||||| ||| ||| |||||||||||||| || ||||| |
|
|
| T |
19601 |
acggtacgaatgcatggctcaacatccagaatgtgttgagtacatctcaaaatacaaaacat |
19662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0319; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 115 - 263
Target Start/End: Original strand, 13675 - 13823
Alignment:
| Q |
115 |
gtgataccgtcaagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggtaggaatgc |
214 |
Q |
| |
|
||||||||||||| ||||||||||| ||| || ||||| |||||| ||||||| ||||| ||||| || ||| ||||||||| |||||||||||||||| |
|
|
| T |
13675 |
gtgataccgtcaatcgccctcagcattacatcaaagtaaagagcgctcacagagccagcgtccatagcattcctaagcaaacgcttgacggtaggaatgc |
13774 |
T |
|
| Q |
215 |
atggctcaatatccaacatgaattgggtacatctcaaaatgcagaacat |
263 |
Q |
| |
|
||||||||| ||||| |||| ||| |||||||||||||| || ||||| |
|
|
| T |
13775 |
atggctcaacatccagcatgtgttgagtacatctcaaaatacaaaacat |
13823 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 25 - 223
Target Start/End: Complemental strand, 19030328 - 19030130
Alignment:
| Q |
25 |
tcccctcctgttatctccttgcgatagcgcacgacatttcttgtctccaaaagagaccagaaatcatgaaagagttcagcagtatcagatgtgataccgt |
124 |
Q |
| |
|
|||||||| ||||| ||| ||||||| ||||| ||||| | | || |||||||||||| || |||| |||||||||| | ||||| || || |||| |
|
|
| T |
19030328 |
tcccctcccgttatttccctgcgataacgcacaacattccgcgacttcaaaagagaccaaaagtcattgaagagttcagtggcatcaggagtaatgccgt |
19030229 |
T |
|
| Q |
125 |
caagcgccctcagcagtacgtcgaagtagagagcggtcacagaaccagcatccatggcgttcttaagcaaacctttgacggtaggaatgcatggctcaa |
223 |
Q |
| |
|
|||| |||||||||| ||| || || ||||| ||| || |||| ||||||||||| | ||| |||| |||| ||||||||||||||||||||||||| |
|
|
| T |
19030228 |
caagtgccctcagcattacatcaaaatagagtgcgctcgcagagccagcatccataacattcctaagaaaacgcttgacggtaggaatgcatggctcaa |
19030130 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University