View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7709_low_15 (Length: 284)
Name: NF7709_low_15
Description: NF7709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7709_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 194; Significance: 1e-105; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 33 - 274
Target Start/End: Original strand, 36364032 - 36364273
Alignment:
| Q |
33 |
gagtgggagtgagctagctagatagggtgtgagtgagtgaatgaatgaagtgtgtgagaagagtgtaaatatatagtggaaaaagtaaagatnnnnnnnt |
132 |
Q |
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| T |
36364032 |
gagtgggagtgagctagctagatagggtgtgagtgagtgaatgaatgaagtgtgtgagaagagtgtaaatatatagtggaaaaagtaaagataaaaaatt |
36364131 |
T |
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| Q |
133 |
gaggacattttgtatataatcttttacagttgggg-gtgtagctaggtgcattaaattgacgcggatataacgtgaaattcaatatcatagccccactac |
231 |
Q |
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| T |
36364132 |
-agtacattttgtatatagtcttttacagttggggggtgtagctaggtgcattaaattgacgcggatataacgtgagattcaatatcatagccccactac |
36364230 |
T |
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| Q |
232 |
caccagagtaatcgaatactgttactaccaccacctcattcat |
274 |
Q |
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| T |
36364231 |
caccagagtaatcgaatactgttactaccaccacctcattcat |
36364273 |
T |
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