View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7709_low_22 (Length: 253)
Name: NF7709_low_22
Description: NF7709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7709_low_22 |
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Alignment Details
Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 15 - 236
Target Start/End: Original strand, 31106549 - 31106770
Alignment:
| Q |
15 |
tatcatcgtcactgtcacatacataagaggtgcactggtgttgaaattcctctcagacgtcttcttaatataaggtctaaaaaataacatgcaaattctc |
114 |
Q |
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| T |
31106549 |
tatcatcgtcactgtcacatacataagaggtgcactggtgttgaaattcctctcagacgtcttcttaatataaggtctaaaaaataatatacaaattctc |
31106648 |
T |
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| Q |
115 |
agcatacgaagacctataaacaacaagaaactttggatctgtttggagataaaaaggttaatgggataatgaaaatatataaacatcttcatccaattgg |
214 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
31106649 |
agcatacgaatacctataaacaacaagaaactttggatctgttttgagataaaaaggttaatgggataatgaaaatatataagcatcttcatccaattgg |
31106748 |
T |
|
| Q |
215 |
gacccaccattgagatgataat |
236 |
Q |
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|||||||||||||||||||||| |
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| T |
31106749 |
gacccaccattgagatgataat |
31106770 |
T |
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