View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7709_low_28 (Length: 208)
Name: NF7709_low_28
Description: NF7709
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7709_low_28 |
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Alignment Details
Target: chr5 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 31937360 - 31937530
Alignment:
| Q |
23 |
gcaaagctcgccataaaatctagaaactaagtcaacgaagacaggacacttaagattcttccaacagtatagaagttcttcaacgtccatcaagtcctta |
122 |
Q |
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||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
31937360 |
gcaaagctcaccataaaatctagaaactaagtcaacgaagacaggacacttaagattcttccaacagtatagaagttcttcaacatccatcaagtcctta |
31937459 |
T |
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| Q |
123 |
gtcttcccttctgccacaatcatctctgccaaatagttctcgaaactcctgcacgcgtcttccacttcttc |
193 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
31937460 |
gtcttcccttctgccacaatcatctctgccaaatagttctcgaaactcctgcatgcgtcttccacttcttc |
31937530 |
T |
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