View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7710_high_20 (Length: 309)
Name: NF7710_high_20
Description: NF7710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7710_high_20 |
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Alignment Details
Target: chr2 (Bit Score: 291; Significance: 1e-163; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 291; E-Value: 1e-163
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 37394646 - 37394940
Alignment:
| Q |
1 |
atctatttgtatcaccacatctgatatggttccacatcaacatctcagattaaagtctttccaaactaatgaatcttgatttgagaattgcaaatgctct |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37394646 |
atctatttgtatcaccacatctgatatggttccacatcaacatctcagattaaagtctttccaaactaatgaatcttgatttgagaattgcaaatgctct |
37394745 |
T |
|
| Q |
101 |
taacatcatgggaacccggcgccatattaaccgtgatgttacatgtattgtaagccgttcccttcaatttgatatacttaagaacaatcactttaccagg |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37394746 |
taacatcatgggaacccggcgccatattaaccgtgatgttacatgtattgtaagctgttcccttcaatttgatatacttaagaacaatcactttaccagg |
37394845 |
T |
|
| Q |
201 |
aaattcagcctttgatatcaatgtaaatttataacctggtacaacttctttccagaagtcagggttatttatcaatttattcaccgtcataagtg |
295 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37394846 |
aaattcagcctttgatatcaatgtaaatttataacctggtacaacttctttccagaagtcagggttatttatcaatttattcaccgtcataagtg |
37394940 |
T |
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