View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7710_high_33 (Length: 207)
Name: NF7710_high_33
Description: NF7710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7710_high_33 |
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Alignment Details
Target: chr1 (Bit Score: 148; Significance: 3e-78; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 17 - 191
Target Start/End: Original strand, 14393828 - 14394005
Alignment:
| Q |
17 |
gaagaaaattacaatcaaagttaggaacaaaactagcagaagaaggagcagcatcatcaccaccatctctataaaacccttgatcaaaatcaaaaccata |
116 |
Q |
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|||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
14393828 |
gaagaaaattacaatcaaagtttggtacaaaactagcagaagaaggagcagcatcatcaccaccatctctataaaacccttgatcaaaatcaaaaccata |
14393927 |
T |
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| Q |
117 |
accatgaccataaccattgctattatg---attatcattaattagaggaagtggcattgatgaaaacgatgaggaatg |
191 |
Q |
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||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||| |
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| T |
14393928 |
accatgaccataaccattgctattatgattattattattaattagaggaagtggcattgatgaaaacgatgaagaatg |
14394005 |
T |
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