View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7710_low_26 (Length: 438)
Name: NF7710_low_26
Description: NF7710
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7710_low_26 |
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Alignment Details
Target: chr2 (Bit Score: 362; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 362; E-Value: 0
Query Start/End: Original strand, 23 - 423
Target Start/End: Complemental strand, 41027372 - 41026971
Alignment:
| Q |
23 |
ttgataaagaaattaatataccttagaagaattgagatgaagaa-tgtgtgaatgagatgtggttacggtatggtttatataggtgatgagatttaaggg |
121 |
Q |
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| T |
41027372 |
ttgattaagaaattaatataccttagaagaattgagatgaagaaatgtgtgaatgagatgtggctacggtatggtttatataggtgatgagatttaacgg |
41027273 |
T |
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| Q |
122 |
gttgtgtgttttttgaaagaagaaaaaacacaaagggtaatgaatgagtcgatccgtgagatggggtttgaggtgtttttgacggttgatttgtttttta |
221 |
Q |
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| T |
41027272 |
gttgtgtgttttttgaaagaagaaaaaacacaaagggtaatgaatgagtcgatccgtgagatggggtttgaggtgtttttgacggttgatttgtttttta |
41027173 |
T |
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| Q |
222 |
tcgatggctgagaatgaatggtagatttcacggggatcgatgacgtggattagtggttcaatagtgttttcgatttcgcgtttctgaaagggaaaatttg |
321 |
Q |
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| T |
41027172 |
tcgatggctgagaatgaatgatagatttcacggggatcgatgacgtggattagtggttcaatagtgttttcgatttcgcgtttttgaaaaggaaaatttg |
41027073 |
T |
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| Q |
322 |
tgatttttagtggttggcggtttccaattttcatagcgcgagtttcatttttgtttgagtttcgatgacgtggattaaaccaaagttatcaaattatcat |
421 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
41027072 |
tgatttttagtggttggcggtttccaattttcatagcgcgggtttcatttttgtttgtgtttcgatgacgtggattaaaccaaagttatcaaattatcat |
41026973 |
T |
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| Q |
422 |
at |
423 |
Q |
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|| |
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| T |
41026972 |
at |
41026971 |
T |
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