View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7711_high_20 (Length: 229)

Name: NF7711_high_20
Description: NF7711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7711_high_20
NF7711_high_20
[»] chr2 (34 HSPs)
chr2 (1-110)||(41122474-41122583)
chr2 (1-110)||(23185126-23185233)
chr2 (1-110)||(23596389-23596496)
chr2 (1-110)||(22271293-22271399)
chr2 (1-111)||(24851466-24851578)
chr2 (1-110)||(28702018-28702129)
chr2 (1-110)||(40780504-40780615)
chr2 (1-73)||(24724093-24724165)
chr2 (1-108)||(20569543-20569652)
chr2 (1-110)||(24778525-24778637)
chr2 (1-66)||(26623265-26623330)
chr2 (1-111)||(22455753-22455866)
chr2 (1-109)||(25188600-25188708)
chr2 (1-110)||(24575226-24575338)
chr2 (1-110)||(17964097-17964208)
chr2 (1-110)||(22257383-22257495)
chr2 (1-110)||(39038434-39038545)
chr2 (1-110)||(45087791-45087902)
chr2 (16-110)||(31328783-31328878)
chr2 (16-110)||(31335504-31335599)
chr2 (1-107)||(25828352-25828460)
chr2 (40-116)||(19539641-19539717)
chr2 (1-111)||(22188901-22189014)
chr2 (4-110)||(28551718-28551825)
chr2 (60-110)||(22316797-22316846)
chr2 (1-47)||(24838350-24838396)
chr2 (47-110)||(27294685-27294749)
chr2 (60-110)||(38040801-38040851)
chr2 (1-79)||(10010544-10010624)
chr2 (60-118)||(22763021-22763080)
chr2 (46-110)||(22782472-22782536)
chr2 (83-111)||(20567415-20567443)
chr2 (1-110)||(21537981-21538092)
chr2 (59-110)||(24450305-24450356)
[»] chr4 (34 HSPs)
chr4 (1-110)||(15560463-15560574)
chr4 (1-110)||(41115619-41115728)
chr4 (1-112)||(22089476-22089586)
chr4 (1-104)||(6640891-6640994)
chr4 (1-110)||(8686247-8686353)
chr4 (14-110)||(11914864-11914960)
chr4 (1-110)||(44397403-44397513)
chr4 (1-87)||(11900325-11900410)
chr4 (1-112)||(29681322-29681434)
chr4 (1-110)||(19611177-19611288)
chr4 (1-110)||(3792527-3792637)
chr4 (1-110)||(12599948-12600059)
chr4 (1-110)||(22676365-22676475)
chr4 (1-111)||(29120559-29120672)
chr4 (1-112)||(54679052-54679165)
chr4 (1-49)||(17538921-17538969)
chr4 (1-110)||(24628702-24628814)
chr4 (31-110)||(17788874-17788954)
chr4 (1-110)||(23120732-23120842)
chr4 (1-110)||(37436335-37436445)
chr4 (47-110)||(40859900-40859963)
chr4 (5-48)||(10661995-10662038)
chr4 (5-48)||(10876140-10876183)
chr4 (25-116)||(14605735-14605829)
chr4 (58-110)||(20976646-20976699)
chr4 (1-110)||(23749715-23749830)
chr4 (1-107)||(15134915-15135023)
chr4 (60-113)||(31267577-31267630)
chr4 (1-110)||(14905130-14905242)
chr4 (1-108)||(56033722-56033832)
chr4 (59-111)||(13692992-13693044)
chr4 (78-110)||(14116000-14116032)
chr4 (16-110)||(16631631-16631728)
chr4 (60-111)||(33377562-33377613)
[»] chr6 (36 HSPs)
chr6 (1-112)||(17304109-17304224)
chr6 (1-112)||(15301411-15301524)
chr6 (1-110)||(3680299-3680408)
chr6 (1-110)||(13435080-13435191)
chr6 (1-78)||(7762867-7762944)
chr6 (1-110)||(13601362-13601473)
chr6 (1-104)||(26941607-26941710)
chr6 (1-110)||(17380757-17380869)
chr6 (1-88)||(19469849-19469935)
chr6 (1-110)||(19085327-19085438)
chr6 (1-112)||(21624284-21624398)
chr6 (1-110)||(32543458-32543569)
chr6 (1-110)||(10631331-10631443)
chr6 (1-112)||(14101287-14101400)
chr6 (1-110)||(15532473-15532585)
chr6 (1-111)||(22801338-22801449)
chr6 (10-110)||(19624971-19625073)
chr6 (1-110)||(25593269-25593377)
chr6 (1-110)||(16876107-16876214)
chr6 (1-56)||(17926995-17927050)
chr6 (17-110)||(19833848-19833942)
chr6 (1-88)||(19623205-19623293)
chr6 (3-109)||(24116013-24116122)
chr6 (1-112)||(9717018-9717132)
chr6 (1-111)||(16332923-16333035)
chr6 (1-108)||(16528511-16528621)
chr6 (60-116)||(32756750-32756806)
chr6 (1-88)||(20113476-20113565)
chr6 (1-110)||(21234350-21234462)
chr6 (83-112)||(10972370-10972399)
chr6 (1-87)||(14732958-14733045)
chr6 (60-113)||(11021309-11021363)
chr6 (60-115)||(16124326-16124381)
chr6 (83-111)||(16266243-16266271)
chr6 (83-111)||(25787046-25787074)
chr6 (60-113)||(31571766-31571820)
[»] chr5 (25 HSPs)
chr5 (3-110)||(21199846-21199953)
chr5 (1-108)||(25097874-25097981)
chr5 (1-108)||(25156966-25157073)
chr5 (5-110)||(22000862-22000969)
chr5 (1-110)||(6513261-6513373)
chr5 (5-88)||(21207643-21207726)
chr5 (15-110)||(31487403-31487500)
chr5 (1-110)||(7746527-7746639)
chr5 (1-110)||(90264-90375)
chr5 (1-110)||(6498511-6498620)
chr5 (4-110)||(30116708-30116816)
chr5 (1-112)||(19546361-19546471)
chr5 (4-110)||(3246297-3246403)
chr5 (47-110)||(28465225-28465287)
chr5 (1-110)||(21076014-21076125)
chr5 (1-110)||(21100581-21100692)
chr5 (1-104)||(23413807-23413913)
chr5 (1-88)||(11993107-11993194)
chr5 (1-111)||(13546358-13546471)
chr5 (5-110)||(33932460-33932569)
chr5 (4-111)||(35932840-35932950)
chr5 (59-110)||(26120710-26120760)
chr5 (1-110)||(37395362-37395473)
chr5 (78-110)||(30742135-30742167)
chr5 (60-111)||(33021844-33021895)
[»] scaffold0598 (1 HSPs)
scaffold0598 (1-88)||(2589-2675)
[»] scaffold0081 (1 HSPs)
scaffold0081 (1-110)||(13191-13300)
[»] chr1 (23 HSPs)
chr1 (3-110)||(21192659-21192767)
chr1 (1-110)||(17025775-17025884)
chr1 (1-110)||(18614108-18614218)
chr1 (1-110)||(12625321-12625430)
chr1 (1-110)||(7308986-7309096)
chr1 (1-110)||(22202654-22202764)
chr1 (1-110)||(30892260-30892371)
chr1 (16-112)||(14294070-14294166)
chr1 (1-56)||(17017822-17017877)
chr1 (1-110)||(25449360-25449469)
chr1 (1-114)||(22153017-22153132)
chr1 (4-111)||(21983792-21983902)
chr1 (17-110)||(20959819-20959911)
chr1 (5-110)||(12283590-12283695)
chr1 (1-112)||(1577042-1577155)
chr1 (78-112)||(22637456-22637490)
chr1 (60-110)||(39194924-39194974)
chr1 (1-67)||(22202532-22202600)
chr1 (5-78)||(22428115-22428190)
chr1 (78-110)||(23053577-23053609)
chr1 (1-105)||(33257141-33257247)
chr1 (1-105)||(33277313-33277419)
chr1 (78-110)||(42283840-42283872)
[»] scaffold0113 (1 HSPs)
scaffold0113 (1-101)||(2403-2503)
[»] chr7 (46 HSPs)
chr7 (1-110)||(10884022-10884133)
chr7 (1-108)||(13261527-13261636)
chr7 (1-111)||(19237913-19238023)
chr7 (1-110)||(13902507-13902616)
chr7 (1-110)||(4493739-4493850)
chr7 (1-110)||(33604099-33604210)
chr7 (5-110)||(21211434-21211542)
chr7 (1-110)||(39285393-39285503)
chr7 (1-110)||(5001714-5001826)
chr7 (1-106)||(16315389-16315497)
chr7 (1-110)||(12367609-12367720)
chr7 (1-110)||(13259295-13259406)
chr7 (1-110)||(14186880-14186992)
chr7 (5-112)||(16557466-16557575)
chr7 (5-112)||(16608087-16608196)
chr7 (1-62)||(13424769-13424831)
chr7 (1-88)||(13731528-13731616)
chr7 (47-110)||(30025128-30025192)
chr7 (1-110)||(11792065-11792176)
chr7 (1-110)||(21284226-21284337)
chr7 (1-110)||(29936197-29936301)
chr7 (1-57)||(9099110-9099166)
chr7 (1-57)||(9099924-9099980)
chr7 (47-114)||(8182149-8182215)
chr7 (1-110)||(11318589-11318701)
chr7 (4-110)||(15705349-15705458)
chr7 (1-112)||(21691615-21691730)
chr7 (5-88)||(13645669-13645753)
chr7 (47-117)||(1292240-1292311)
chr7 (1-110)||(13027803-13027914)
chr7 (5-110)||(2499223-2499330)
chr7 (1-66)||(13302100-13302167)
chr7 (1-110)||(13138777-13138889)
chr7 (4-114)||(2914511-2914623)
chr7 (1-47)||(3921650-3921696)
chr7 (60-110)||(8932954-8933003)
chr7 (1-88)||(13879361-13879449)
chr7 (1-68)||(16317448-16317517)
chr7 (59-111)||(1559955-1560007)
chr7 (5-112)||(22580110-22580220)
chr7 (58-110)||(3779533-3779584)
chr7 (60-111)||(6045143-6045194)
chr7 (1-66)||(13681534-13681601)
chr7 (83-111)||(18418583-18418611)
chr7 (1-78)||(28623205-28623284)
chr7 (78-110)||(48063740-48063772)
[»] chr3 (52 HSPs)
chr3 (1-110)||(19889788-19889899)
chr3 (1-110)||(12967511-12967621)
chr3 (1-56)||(6252657-6252712)
chr3 (1-111)||(19250239-19250349)
chr3 (1-88)||(26418572-26418658)
chr3 (1-110)||(14310877-14310986)
chr3 (1-110)||(15902393-15902503)
chr3 (1-106)||(6174498-6174599)
chr3 (1-108)||(14063893-14063999)
chr3 (3-110)||(14954607-14954716)
chr3 (5-110)||(23539080-23539185)
chr3 (1-110)||(6089925-6090036)
chr3 (1-110)||(19885927-19886038)
chr3 (1-110)||(29952286-29952400)
chr3 (1-110)||(30001440-30001554)
chr3 (1-110)||(12727085-12727196)
chr3 (3-110)||(17667566-17667676)
chr3 (1-110)||(40799085-40799198)
chr3 (1-110)||(8874974-8875086)
chr3 (1-110)||(14393844-14393956)
chr3 (1-48)||(20724298-20724345)
chr3 (47-110)||(22465377-22465439)
chr3 (1-110)||(49643613-49643725)
chr3 (1-110)||(52282991-52283103)
chr3 (8-66)||(12221300-12221358)
chr3 (3-109)||(16031701-16031809)
chr3 (15-110)||(52919622-52919718)
chr3 (1-110)||(1241924-1242035)
chr3 (1-110)||(12963935-12964046)
chr3 (1-110)||(49554359-49554470)
chr3 (1-109)||(2560383-2560493)
chr3 (4-106)||(21639134-21639237)
chr3 (4-111)||(2025292-2025397)
chr3 (8-88)||(13939116-13939197)
chr3 (1-110)||(14968561-14968677)
chr3 (1-104)||(17239778-17239883)
chr3 (60-116)||(38194117-38194174)
chr3 (60-110)||(11073624-11073673)
chr3 (60-110)||(41044900-41044950)
chr3 (78-111)||(16881443-16881476)
chr3 (60-112)||(17960803-17960855)
chr3 (60-112)||(19888135-19888187)
chr3 (1-110)||(22804870-22804980)
chr3 (1-110)||(31302547-31302657)
chr3 (1-110)||(41494200-41494310)
chr3 (60-111)||(3237890-3237941)
chr3 (1-110)||(11189191-11189301)
chr3 (78-110)||(14006879-14006911)
chr3 (36-88)||(16199932-16199983)
chr3 (60-111)||(17910787-17910838)
chr3 (60-111)||(28165379-28165430)
chr3 (47-110)||(28581292-28581355)
[»] scaffold0025 (1 HSPs)
scaffold0025 (3-102)||(73736-73835)
[»] chr8 (32 HSPs)
chr8 (5-108)||(18771889-18771990)
chr8 (1-110)||(43644073-43644182)
chr8 (1-110)||(17007500-17007611)
chr8 (1-88)||(19706726-19706812)
chr8 (1-111)||(30422280-30422392)
chr8 (1-110)||(25163261-25163372)
chr8 (1-110)||(19957188-19957299)
chr8 (1-110)||(17541339-17541450)
chr8 (1-110)||(45539334-45539445)
chr8 (4-110)||(22672968-22673074)
chr8 (1-78)||(15336937-15337015)
chr8 (1-78)||(15426002-15426080)
chr8 (1-78)||(15517306-15517384)
chr8 (1-88)||(12758592-12758680)
chr8 (4-110)||(14990941-14991049)
chr8 (1-88)||(19153237-19153325)
chr8 (60-111)||(9767963-9768013)
chr8 (83-114)||(17442787-17442818)
chr8 (4-108)||(23185599-23185703)
chr8 (1-68)||(16682103-16682172)
chr8 (1-110)||(18121982-18122094)
chr8 (1-39)||(20256362-20256400)
chr8 (1-39)||(20256447-20256485)
chr8 (1-39)||(29692575-29692613)
chr8 (4-111)||(36104533-36104642)
chr8 (60-110)||(43638954-43639004)
chr8 (1-110)||(31445292-31445403)
chr8 (58-110)||(43773308-43773360)
chr8 (59-110)||(1210610-1210661)
chr8 (59-110)||(13431528-13431579)
chr8 (59-110)||(17287073-17287124)
chr8 (59-110)||(18676847-18676898)
[»] scaffold1747 (1 HSPs)
scaffold1747 (26-110)||(517-602)
[»] scaffold1745 (1 HSPs)
scaffold1745 (26-110)||(809-894)
[»] scaffold0028 (2 HSPs)
scaffold0028 (6-110)||(80560-80664)
scaffold0028 (1-110)||(24579-24689)
[»] scaffold1657 (1 HSPs)
scaffold1657 (1-110)||(1014-1123)
[»] scaffold0364 (1 HSPs)
scaffold0364 (1-108)||(5372-5480)
[»] scaffold0004 (3 HSPs)
scaffold0004 (8-111)||(245064-245167)
scaffold0004 (1-110)||(378354-378466)
scaffold0004 (4-110)||(210603-210709)
[»] scaffold0035 (3 HSPs)
scaffold0035 (2-110)||(28976-29079)
scaffold0035 (1-108)||(20268-20376)
scaffold0035 (4-110)||(110398-110509)
[»] scaffold0859 (1 HSPs)
scaffold0859 (1-113)||(2163-2277)
[»] scaffold0567 (1 HSPs)
scaffold0567 (1-110)||(9098-9206)
[»] scaffold0210 (1 HSPs)
scaffold0210 (1-110)||(817-929)
[»] scaffold0163 (1 HSPs)
scaffold0163 (1-104)||(25630-25736)
[»] scaffold0022 (2 HSPs)
scaffold0022 (1-110)||(36626-36737)
scaffold0022 (1-110)||(134686-134797)
[»] scaffold0439 (1 HSPs)
scaffold0439 (1-110)||(7512-7623)
[»] scaffold0315 (1 HSPs)
scaffold0315 (2-110)||(7866-7976)
[»] scaffold0273 (1 HSPs)
scaffold0273 (1-110)||(4887-4996)
[»] scaffold0040 (1 HSPs)
scaffold0040 (1-110)||(2873-2987)
[»] scaffold0530 (1 HSPs)
scaffold0530 (1-88)||(2817-2905)
[»] scaffold0084 (2 HSPs)
scaffold0084 (8-110)||(31786-31890)
scaffold0084 (1-110)||(48512-48624)
[»] scaffold0471 (1 HSPs)
scaffold0471 (4-111)||(2650-2758)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-110)||(7076-7187)
[»] scaffold0290 (1 HSPs)
scaffold0290 (1-110)||(19457-19569)
[»] scaffold0064 (1 HSPs)
scaffold0064 (15-78)||(44682-44745)
[»] scaffold0498 (1 HSPs)
scaffold0498 (26-110)||(1037-1126)
[»] scaffold0116 (1 HSPs)
scaffold0116 (51-110)||(21790-21849)
[»] scaffold0479 (1 HSPs)
scaffold0479 (1-110)||(9158-9274)
[»] scaffold0205 (1 HSPs)
scaffold0205 (1-112)||(755-868)
[»] scaffold0146 (1 HSPs)
scaffold0146 (1-104)||(14317-14422)
[»] scaffold0005 (1 HSPs)
scaffold0005 (25-116)||(211549-211643)
[»] scaffold1539 (1 HSPs)
scaffold1539 (60-110)||(1558-1608)
[»] scaffold0738 (1 HSPs)
scaffold0738 (60-110)||(5623-5673)
[»] scaffold0525 (1 HSPs)
scaffold0525 (60-110)||(7054-7103)
[»] scaffold0056 (1 HSPs)
scaffold0056 (47-110)||(26500-26564)
[»] scaffold0009 (2 HSPs)
scaffold0009 (1-47)||(267977-268023)
scaffold0009 (47-115)||(83489-83556)
[»] scaffold0337 (1 HSPs)
scaffold0337 (1-38)||(14238-14275)
[»] scaffold0267 (1 HSPs)
scaffold0267 (60-112)||(7178-7230)
[»] scaffold0193 (1 HSPs)
scaffold0193 (77-110)||(16956-16989)
[»] scaffold0072 (1 HSPs)
scaffold0072 (60-114)||(37556-37611)
[»] scaffold0065 (1 HSPs)
scaffold0065 (1-38)||(1280-1317)
[»] scaffold1149 (1 HSPs)
scaffold1149 (83-111)||(2590-2618)
[»] scaffold0217 (1 HSPs)
scaffold0217 (47-110)||(18231-18295)


Alignment Details
Target: chr2 (Bit Score: 71; Significance: 3e-32; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41122474 - 41122583
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaaccc-ccctcttgtgtttt 99  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| ||||||||| ||||| || |||||||| || |||||||||||    
T  41122474 tcacttcagaagctgaactctatctgcttctgatcagtgacttcagtaggagaaaacgaagaaaaagtaaacacaa-ttcaaccctccttcttgtgtttt 41122572  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  41122573 tctcaccttca 41122583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23185126 - 23185233
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttttt 100  Q
    |||||||||||| |||||||||| ||||||||| || |||||||||||||||||||  |||||||||| |||| || ||||||||||| |||||||||||    
T  23185126 tcacttcagaagttgaactctatctgcttctgatcaatgacttcagtaggagaaaaagaagaaaaagctaacacaa-ttcaacccccc-cttgtgttttt 23185223  T
Q  101 ctcaccttca 110  Q
    || |||||||    
T  23185224 cttaccttca 23185233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 23596389 - 23596496
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttttt 100  Q
    |||||||||||| |||||||||| ||||||||| || |||||||||||||||||||  |||||||||| |||| || ||||||||||| |||||||||||    
T  23596389 tcacttcagaagttgaactctatctgcttctgatcaatgacttcagtaggagaaaaagaagaaaaagctaacacaa-ttcaacccccc-cttgtgttttt 23596486  T
Q  101 ctcaccttca 110  Q
    || |||||||    
T  23596487 cttaccttca 23596496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22271399 - 22271293
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttttt 100  Q
    ||||||||||||||||||||||| ||||| ||| ||||||||||||||||||||| | ||||||||| ||||| ||||  | ||||||   | |||||||    
T  22271399 tcacttcagaagctgaactctatctgcttatgatcagtgacttcagtaggagaaatcgaagaaaaagtaaacacaattcaatcccccc---tatgttttt 22271303  T
Q  101 ctcaccttca 110  Q
    ||||||||||    
T  22271302 ctcaccttca 22271293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 24851466 - 24851578
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc-ccctcttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| ||||||||||||||| || |||||||| || |||||||||    
T  24851466 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaa-ttcaaccctccttcttgtgtt 24851564  T
Q  98 tttctcaccttcag 111  Q
    ||||||||||||||    
T  24851565 tttctcaccttcag 24851578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 28702018 - 28702129
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||||||||||||| |||||  |||||  ||||||||||  ||||||||| ||||| |||| |||||||||| ||||||||    
T  28702018 tcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaatt-caaccccccttcttgtgtt 28702116  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  28702117 tttctcaccttca 28702129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40780615 - 40780504
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc-ccctcttgtgtt 97  Q
    ||||||||||||| ||||||||||||||||||| |||||  |||||  ||||||||||| |||||||| | |||| || |||||||| || |||||||||    
T  40780615 tcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaa-ttcaaccctccttcttgtgtt 40780517  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  40780516 tttctcaccttca 40780504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 24724165 - 24724093
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaaca 73  Q
    ||||||||||||||||||||||| ||||||||| || ||| |||||||||||||||| ||||||||| |||||    
T  24724165 tcacttcagaagctgaactctatctgcttctgaccaatgatttcagtaggagaaaacgaagaaaaagaaaaca 24724093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20569543 - 20569652
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    |||||||||||||  |||||||||||||||||| |||||  |||||  ||||||||||| |||||||||  |||| || ||||||||||| |||||||||    
T  20569543 tcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaa-ttcaaccccccttcttgtgtt 20569641  T
Q  98 tttctcacctt 108  Q
    |||||||||||    
T  20569642 tttctcacctt 20569652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 24778637 - 24778525
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    |||||||||||||  |||||||||||||||||| |||||  |||||  |||||| |||| |||||||||| |||| || |||||||||||  ||||||||    
T  24778637 tcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagtaaacgaagaaaaagccaacacaa-ttcaacccccccttcttgtgt 24778539  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  24778538 ttttctcaccttca 24778525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 26623265 - 26623330
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaa 66  Q
    |||||||||||| |||| ||||| ||||||||||||||||||| ||||||||||||| ||||||||    
T  26623265 tcacttcagaaggtgaattctatctgcttctgaacagtgacttaagtaggagaaaacgaagaaaaa 26623330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 22455753 - 22455866
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||| ||||||||| |||||  || ||  ||||||||||| |||||||||| |||| |||| |||||||||  ||||||||    
T  22455753 tcacttcagaagtagaactctatctgcttctgatcagtgttttgagcttaggagaaaacgaagaaaaagctaacacaatt-caacccccccttcttgtgt 22455851  T
Q  97 ttttctcaccttcag 111  Q
    |||||||||||||||    
T  22455852 ttttctcaccttcag 22455866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 25188708 - 25188600
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| |||||||||| |||| || |||| ||||||||||||| ||    
T  25188708 tcacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaccccccctcttgtg-tt 25188611  T
Q  99 ttctcaccttc 109  Q
    |||||||||||    
T  25188610 ttctcaccttc 25188600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 24575338 - 24575226
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc--ccctcttgtgt 96  Q
    |||||||||||||  |||||||||||||||||| |||||  |||||  ||||||||||  |||||||||| |||| || ||||||||  |  ||||||||    
T  24575338 tcacttcagaagcaaaactctatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaagctaacacaa-ttcaacccttcattcttgtgt 24575240  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  24575239 ttttctcaccttca 24575226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17964097 - 17964208
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    |||| |||||||| |||||||||||| || ||| |||||  |||||  ||||||||||| |||||||||  |||| || ||||||||||| |||| ||||    
T  17964097 tcacctcagaagcagaactctatttgtttatgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaa-ttcaaccccccttcttttgtt 17964195  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  17964196 tttctcaccttca 17964208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 22257495 - 22257383
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    |||||||||||||  ||||||||||||||||||  ||||  |||||  | ||||||||  |||||||||| |||| ||||  | |||||| |||||||||    
T  22257495 tcacttcagaagcataactctatttgcttctgataagtgttttcagctttggagaaaatgaagaaaaagctaacacaattgaacccccccttcttgtgtt 22257396  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  22257395 tttctcaccttca 22257383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39038434 - 39038545
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaac-ccccctcttgtgtt 97  Q
    ||||||||||||   |||||||| ||||||||| |||||  |||||  ||||||||||| |||||||||| |||| || |||||| |||| |||||| ||    
T  39038434 tcacttcagaagtataactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaactccccttcttgtttt 39038532  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  39038533 tttctcaccttca 39038545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45087791 - 45087902
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||   || ||||| ||||||||| |||||  |||||  ||||||||||  ||||||||| ||||| |||| |||||||||| ||||||||    
T  45087791 tcacttcagaagtataaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaatt-caaccccccttcttgtgtt 45087889  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  45087890 tttctcaccttca 45087902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 31328783 - 31328878
Alignment:
Q  16 aactctatttgcttctgaacagtgacttcag-taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    |||| ||| ||||||| |||||||  ||||| ||||||||||  |||||||| |||||| |||| |||||||||| |||||||||||||||||||||    
T  31328783 aactttatctgcttctaaacagtgttttcagataggagaaaaagaagaaaaaacaaacacaatt-caaccccccttcttgtgtttttctcaccttca 31328878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 31335504 - 31335599
Alignment:
Q  16 aactctatttgcttctgaacagtgacttcag-taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    |||| ||| ||||||| |||||||  ||||| ||||||||||  |||||||| |||||| |||| |||||||||| |||||||||||||||||||||    
T  31335504 aactttatctgcttctaaacagtgttttcagataggagaaaaagaagaaaaaacaaacacaatt-caaccccccttcttgtgtttttctcaccttca 31335599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 25828460 - 25828352
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||| ||||||  || ||||||||||||||| |||||  || |   ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||    
T  25828460 tcactttagaagcataaatctatttgcttctgatcagtgtttttaccttaggagaaaacgaagaaaaagctaacataatt-caaccccccttcttgtgtt 25828362  T
Q  98 tttctcacct 107  Q
    ||||||||||    
T  25828361 tttctcacct 25828352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 40 - 116
Target Start/End: Complemental strand, 19539717 - 19539641
Alignment:
Q  40 acttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcagattct 116  Q
    ||||||| || ||||||  |||||||||| |||| |||| |||||||||| ||||||||||||||||||||| |||||    
T  19539717 acttcagaagtagaaaatgaagaaaaagctaacacaatt-caaccccccttcttgtgtttttctcaccttcatattct 19539641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 22188901 - 22189014
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||| ||| ||||||||| |||||  |||||  ||||||||||  |||||||| | |||| |||| ||| |||||  ||||||||    
T  22188901 tcacttcagaagtagaactatatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaatt-caatcccccgttcttgtgt 22188999  T
Q  97 ttttctcaccttcag 111  Q
    |||||||||||||||    
T  22189000 ttttctcaccttcag 22189014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 28551718 - 28551825
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttc 101  Q
    |||||||||  ||||||||| ||||||||||| |    |||||| | |||||||  |||||||||| |||| |||| |||||||||| ||||||||||||    
T  28551718 cttcagaagtagaactctatctgcttctgaactgcattttcagttatgagaaaaagaagaaaaagctaacacaatt-caaccccccttcttgtgtttttc 28551816  T
Q  102 tcaccttca 110  Q
    |||||||||    
T  28551817 tcaccttca 28551825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 22316846 - 22316797
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    ||||||||| |||| |||| |||||||| ||||||||||||||||||||||    
T  22316846 agaaaaagctaacagaatt-caacccccttcttgtgtttttctcaccttca 22316797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24838396 - 24838350
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt 47  Q
    |||||||||||||||||||||||  | ||||||| ||||||||||||    
T  24838396 tcacttcagaagctgaactctatcaggttctgaatagtgacttcagt 24838350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 27294749 - 27294685
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttca 110  Q
    ||||||||||| |||||||| | |||| |||| |||||||||  ||||||||||||||||||||||    
T  27294749 taggagaaaacgaagaaaaaactaacacaatt-caacccccccttcttgtgtttttctcaccttca 27294685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 38040801 - 38040851
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||| ||||| ||||  | ||||||||||||||||||||||||||||    
T  38040801 agaaaaagaaaacacaattcaaccccccctcttgtgtttttctcaccttca 38040851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10010544 - 10010624
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaattt 79  Q
    |||||| |||||| ||||||||||||||||||| |||||  |||||  ||||||||||| || ||||| | |||| |||||    
T  10010544 tcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaaactaacacaattt 10010624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 118
Target Start/End: Complemental strand, 22763080 - 22763021
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttcagattcttc 118  Q
    |||||||| ||||| |||| |||||||||  |||||||||||||||||||||||| |||||    
T  22763080 agaaaaagaaaacacaatt-caacccccccttcttgtgtttttctcaccttcagaatcttc 22763021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 46 - 110
Target Start/End: Original strand, 22782472 - 22782536
Alignment:
Q  46 gtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttttctcaccttca 110  Q
    |||||||||||  |||||||||| |||| || ||||||||||| |||||||||||| |||||||||    
T  22782472 gtaggagaaaaagaagaaaaagctaacacaa-ttcaaccccccttcttgtgtttttatcaccttca 22782536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 20567443 - 20567415
Alignment:
Q  83 cccccctcttgtgtttttctcaccttcag 111  Q
    |||||||||||||||||||||||||||||    
T  20567443 cccccctcttgtgtttttctcaccttcag 20567415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21537981 - 21538092
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||  ||||||||| ||||||| | || ||  |||||  || |||||||| ||||||||||||||| ||||  | |  || |||||| |||    
T  21537981 tcacttcagaagtagaactctatctgcttctaatcaatgttttcagcttaagagaaaacgaagaaaaagcaaacacaattcaatcttccttcttgtattt 21538080  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  21538081 ttctcaccttca 21538092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 24450305 - 24450356
Alignment:
Q  59 aagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    ||||||||| ||||| |||| |||||||||| |||||||||||||||||||||    
T  24450305 aagaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttca 24450356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 1e-31; HSPs: 34)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 15560574 - 15560463
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt--aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||  |||||||||||||||||||||||||| |||| |||||||||| ||||||||    
T  15560574 tcacttcagaagctgaactctattaggttctgaacagtgacttcagtttaggagaaaacaaagaaaaagcaaacacaatt-caaccccccttcttgtgtt 15560476  T
Q  98 tttctcaccttca 110  Q
    ||| |||||||||    
T  15560475 tttttcaccttca 15560463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 41115619 - 41115728
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttttt 100  Q
    ||||||||||||||||||||||| ||||||||| ||| ||||||||||||||||||| |||||||||  |||| ||||  ||||||| ||||||||||||    
T  41115619 tcacttcagaagctgaactctatctgcttctgatcagcgacttcagtaggagaaaacgaagaaaaagttaacacaattcaaacccccttcttgtgttttt 41115718  T
Q  101 ctcaccttca 110  Q
    ||||||||||    
T  41115719 ctcaccttca 41115728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 22089586 - 22089476
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttttt 100  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||| | ||||| |||||||||  |||| || |||||||||| ||||||||||||    
T  22089586 tcacttcagaagctgaactctatctgcttctgatcagtgacttcagtagaataaaacgaagaaaaagttaacacaa-ttcaacccccttcttgtgttttt 22089488  T
Q  101 ctcaccttcaga 112  Q
    ||||||||||||    
T  22089487 ctcaccttcaga 22089476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 6640994 - 6640891
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttt 99  Q
    ||||||||||||||||||||||| ||||||||| || |||||| |||| |||||||| |||||||||| |||| |||| |||||||||| ||||||||||    
T  6640994 tcacttcagaagctgaactctatctgcttctgatcaatgacttaagtatgagaaaacgaagaaaaagctaacacaatt-caaccccccttcttgtgtttt 6640896  T
Q  100 tctca 104  Q
    |||||    
T  6640895 tctca 6640891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8686247 - 8686353
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttttt 100  Q
    |||||||| |||| |||||| || ||||||||| |||||||||||||| |||||||| ||||||||||||||| || ||||| |||||||||||| ||||    
T  8686247 tcacttcaaaagcagaactcaatctgcttctgatcagtgacttcagtaagagaaaacgaagaaaaagcaaacacaa-ttcaa-ccccctcttgtg-tttt 8686343  T
Q  101 ctcaccttca 110  Q
    ||||||||||    
T  8686344 ctcaccttca 8686353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 14 - 110
Target Start/End: Complemental strand, 11914960 - 11914864
Alignment:
Q  14 tgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||||||||||||| |||||| |||||||||||||||| |||||||||  |||| ||||  | ||||| ||||  ||||||||||||||||    
T  11914960 tgaactctatttgcttctgaccagtgatttcagtaggagaaaacgaagaaaaagttaacacaattcaatcccccttctttagtttttctcaccttca 11914864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 44397513 - 44397403
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||| ||||||||| ||||||||| |||||  |||||  || |||||||  |||||||||| |||| || |||||||||| |||| |||||    
T  44397513 tcacttcagaagcagaactctatctgcttctgatcagtgttttcagcttaagagaaaaagaagaaaaagccaacacaa-ttcaacccccttcttatgttt 44397415  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  44397414 ttctcaccttca 44397403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 11900410 - 11900325
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaaccccc 87  Q
    ||||||||||| ||||||||||| |||||||||||||||| |||||||||| ||||| || ||||| | |||| || ||||||||||    
T  11900410 tcacttcagaatctgaactctatctgcttctgaacagtgatttcagtaggaaaaaacgaaaaaaaaactaacacaa-ttcaaccccc 11900325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 29681322 - 29681434
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||| | ||||||||||||| ||| |||||  |||||  ||||||||||| |||||||||| ||||  | |||||||| ||||||||||||    
T  29681322 tcacttcagaagcagtactctatttgcttatgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacta-ttcaacccacctcttgtgttt 29681420  T
Q  99 ttctcaccttcaga 112  Q
    |||  |||||||||    
T  29681421 ttcagaccttcaga 29681434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19611177 - 19611288
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    ||||||||||||| ||||||||| ||||||||| | |||  | |||  ||||||||||| |||||||| | |||| || ||||||||||| |||||||||    
T  19611177 tcacttcagaagcagaactctatgtgcttctgatctgtgtttacagtttaggagaaaacgaagaaaaaactaacacaa-ttcaaccccccttcttgtgtt 19611275  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  19611276 tttctcaccttca 19611288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3792637 - 3792527
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||  ||||||||| ||||||| | |||||  |||||  ||||||||||  |||||||||| |||| |||| |||||||| ||||| ||||    
T  3792637 tcacttcagaagtagaactctatctgcttctaagcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaatt-caacccccgtcttgcgttt 3792539  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  3792538 ttctcaccttca 3792527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12600059 - 12599948
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||  ||||| ||||||||||||| |||||  |||||  ||||||||||| |||||||||| |||| ||||  | ||||| |||| |||||    
T  12600059 tcacttcagaagtagaactttatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaatcccccttcttatgttt 12599960  T
Q  99 ttctcaccttca 110  Q
    ||||||| ||||    
T  12599959 ttctcacattca 12599948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22676365 - 22676475
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    |||||||| |||  ||||||||| ||||||||| |||||  |||||  ||||||||||  |||||||||| |||| |||| || ||||| ||||||||||    
T  22676365 tcacttcaaaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaatt-caccccccttcttgtgttt 22676463  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  22676464 ttctcaccttca 22676475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 29120672 - 29120559
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  |||| ||||| |||| |||| |||||||||  ||||||||    
T  29120672 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagagaaagccaacacaatt-caacccccccttcttgtgt 29120574  T
Q  97 ttttctcaccttcag 111  Q
    |||||||||||||||    
T  29120573 ttttctcaccttcag 29120559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 54679165 - 54679052
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||| ||| |||||  |||||  ||||||||||  ||||||||| ||||| |||| |||||||||| ||||||||    
T  54679165 tcacttcagaagtagaactctatctgcttttgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaatt-caaccccccttcttgtgtt 54679067  T
Q  98 tttctcaccttcaga 112  Q
    ||||||||| |||||    
T  54679066 tttctcaccatcaga 54679052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17538969 - 17538921
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtag 49  Q
    |||||| |||||||||||||||| ||||||||| |||||||||||||||    
T  17538969 tcactttagaagctgaactctatctgcttctgatcagtgacttcagtag 17538921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24628702 - 24628814
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaa--cccccctcttgtgt 96  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| |||||||||| |||| || |||||  || || |||||| |    
T  24628702 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaactcctccttcttgtat 24628800  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  24628801 ttttctcaccttca 24628814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 31 - 110
Target Start/End: Original strand, 17788874 - 17788954
Alignment:
Q  31 tgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaa--cccccctcttgtgtttttctcaccttca 110  Q
    ||||||||||||| ||||||||||||| |||||||| |||||| || |||||  ||| | |||||||||||| |||||||||    
T  17788874 tgaacagtgacttaagtaggagaaaacgaagaaaaaacaaacacaa-ttcaactcccacttcttgtgtttttttcaccttca 17788954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23120842 - 23120732
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagt-gacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtt 97  Q
    ||||||||||||| |||||||||||||||||||  |||    |||||  ||||||||||  |||||||||| |||| || |||||||| ||| |||||||    
T  23120842 tcacttcagaagcagaactctatttgcttctgattagtctttttcagcttaggagaaaatgaagaaaaagctaacacaa-ttcaaccctcct-ttgtgtt 23120745  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  23120744 tttctcaccttca 23120732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 37436335 - 37436445
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    |||||||| |||  ||||||||| ||||||||| |||||  ||||   ||||||||||  |||||||| ||| || ||||| | ||||| ||||||||||    
T  37436335 tcacttcataagtagaactctatctgcttctgatcagtgttttcaacataggagaaaaagaagaaaaaccaa-cacaatttaaccccccttcttgtgttt 37436433  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  37436434 ttctcaccttca 37436445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 40859963 - 40859900
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    ||||||||||  |||||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  40859963 taggagaaaaagaagaaaaagctaacacaatt-caaccccccttcttgtgtttttctcaccttca 40859900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 10661995 - 10662038
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcagta 48  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||    
T  10661995 ttcagaagctggactctatctgcttctcaacagtgacttcagta 10662038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Original strand, 10876140 - 10876183
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcagta 48  Q
    ||||||||||| ||||||| ||||||| ||||||||||||||||    
T  10876140 ttcagaagctggactctatctgcttctcaacagtgacttcagta 10876183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 116
Target Start/End: Original strand, 14605735 - 14605829
Alignment:
Q  25 tgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcagattct 116  Q
    ||||||||| |||||  |||||  ||||||||||| || ||||||| |||| ||||  | ||||||| ||||||||||||||||||||| |||||    
T  14605735 tgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttgtgtttttctcaccttcaaattct 14605829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 20976699 - 20976646
Alignment:
Q  58 aaagaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttca 110  Q
    |||||||||||||||| |||| |||||||||  ||||||||||||||||||||||    
T  20976699 aaagaaaaagcaaacacaatt-caacccccccttcttgtgtttttctcaccttca 20976646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 23749830 - 23749715
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaac----ccccctcttgt 94  Q
    ||||||||||||  ||||||||| | ||||||| |||||  |||||  ||||||||||| |||||||||| |||| ||||  | |    |||| ||||||    
T  23749830 tcacttcagaagtagaactctatctacttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaattcaatcccctccccttcttgt 23749731  T
Q  95 gtttttctcaccttca 110  Q
    ||||||||||||||||    
T  23749730 gtttttctcaccttca 23749715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 15135023 - 15134915
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttca--gtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    |||||| |||||  ||||||||||||||||||| |||||  ||||   || |||||||| |||||| | | |||| || ||||||||||| |||||||||    
T  15135023 tcactttagaagtggaactctatttgcttctgatcagtgttttcaacttaagagaaaacgaagaaataactaacacaa-ttcaaccccccttcttgtgtt 15134925  T
Q  98 tttctcacct 107  Q
    ||||||||||    
T  15134924 tttctcacct 15134915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 113
Target Start/End: Original strand, 31267577 - 31267630
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcagat 113  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||||||||    
T  31267577 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcagat 31267630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 14905130 - 14905242
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| || ||  |||||  ||||||||||  |||||||||| |||| ||||  | |||||| | |||||||    
T  14905130 tcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaagccaacacaattcaatccccccttgttgtgtt 14905229  T
Q  98 tttctcaccttca 110  Q
    |||| ||||||||    
T  14905230 tttcccaccttca 14905242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 56033832 - 56033722
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||| |||||||||  ||||  |||||  ||||||||||  |||||||| | |||| || |||||||| ||  ||||||||    
T  56033832 tcacttcagaagtagaactctatctgcttctgataagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaa-ttcaaccctccattcttgtgt 56033734  T
Q  97 ttttctcacctt 108  Q
    ||||||||||||    
T  56033733 ttttctcacctt 56033722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 111
Target Start/End: Complemental strand, 13693044 - 13692992
Alignment:
Q  59 aagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttcag 111  Q
    |||||||| | |||| ||||| | ||||| |||||||||||||||||||||||    
T  13693044 aagaaaaatctaacacaatttgaccccccttcttgtgtttttctcaccttcag 13692992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 14116032 - 14116000
Alignment:
Q  78 ttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||| ||||||||||||||||||||||    
T  14116032 ttcaacccccttcttgtgtttttctcaccttca 14116000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 110
Target Start/End: Complemental strand, 16631728 - 16631631
Alignment:
Q  16 aactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttca 110  Q
    |||||||||||||| ||| |||||  |||||  ||||||||||  |||||||| | |||| |||| ||||||||   ||||||||||||||||||||||    
T  16631728 aactctatttgcttttgatcagtgttttcagcttaggagaaaaggaagaaaaaaccaacacaatt-caaccccctcttcttgtgtttttctcaccttca 16631631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 33377613 - 33377562
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcag 111  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||||||    
T  33377613 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcag 33377562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 69; Significance: 4e-31; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 17304109 - 17304224
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-----tcttgtg 95  Q
    ||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||| || |||||||||||     |||||||    
T  17304109 tcacttcagaagctgaactctatctgcttctgatcagtgacttcagtaggagaaaacgaagaaaaagctaacacaa-ttcaaccccccacccttcttgtg 17304207  T
Q  96 tttttctcaccttcaga 112  Q
    |||||||||||||||||    
T  17304208 tttttctcaccttcaga 17304224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 15301524 - 15301411
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||| |||||| ||||||||||||||||||| |||||  |||||  ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||    
T  15301524 tcactttagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caaccccccttcttgtgtt 15301426  T
Q  98 tttctcaccttcaga 112  Q
    |||||||||||||||    
T  15301425 tttctcaccttcaga 15301411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 3680408 - 3680299
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttt 99  Q
    |||| |||||||||||||||||| ||||||||| |||||| |||||||||| ||| | |||||||| |||||| |||| ||||| |||| ||||||||||    
T  3680408 tcacctcagaagctgaactctatctgcttctgatcagtgatttcagtaggataaatcgaagaaaaaacaaacacaatt-caaccacccttcttgtgtttt 3680310  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  3680309 tctcaccttca 3680299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13435191 - 13435080
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||||||||||||||||||| |||| |||||||||| ||||| ||    
T  13435191 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagcaaacacaatt-caaccccccttcttgtttt 13435093  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  13435092 tttctcaccttca 13435080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7762944 - 7762867
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatt 78  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||||||||| |||||| ||| |||| ||||    
T  7762944 tcacttcagaagctgaactctatctgcttctgatcagtgatttcagtaggagaaaacgaagaaatagctaacacaatt 7762867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13601473 - 13601362
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    ||||||||||||| ||||||||||||||||||| |||||  |||||  ||||||||||| |||||||||| ||||  | ||||||||||| |||||||||    
T  13601473 tcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaactaagaaaaagctaacacga-ttcaaccccccttcttgtgtt 13601375  T
Q  98 tttctcaccttca 110  Q
     ||||||||||||    
T  13601374 attctcaccttca 13601362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 26941710 - 26941607
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaac-ccccctcttgtgtttt 99  Q
    ||||||||||| ||||||||||| ||||||||| ||||||||||||| | ||||||| |||||||||| |||| || |||||| |||  |||||||||||    
T  26941710 tcacttcagaatctgaactctatctgcttctgatcagtgacttcagtggaagaaaacgaagaaaaagctaacacaa-ttcaactccctttcttgtgtttt 26941612  T
Q  100 tctca 104  Q
    |||||    
T  26941611 tctca 26941607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17380869 - 17380757
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||||||||||||| |||||  |||||  ||||||||||  |||||||||| |||| || |||||||||||  ||||||||    
T  17380869 tcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa-ttcaacccccccttcttgtgt 17380771  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  17380770 ttttctcaccttca 17380757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19469935 - 19469849
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||||||||||  ||||||||| || |||||| ||||||||||||||||||||||||| |||||||| |||| || |||||||||||    
T  19469935 tcacttcagaagtggaactctatctgtttctgatcagtgacttcagtaggagaaaacaatgaaaaagctaacacaa-ttcaacccccc 19469849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 19085438 - 19085327
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||| ||||||||||||||||| | |||||  |||||  || |||||||| |||||||||| |||| |||| |||||||||| ||||||||    
T  19085438 tcacttcagaagcagaactctatttgcttcttatcagtgttttcagcttatgagaaaacgaagaaaaagccaacacaatt-caaccccccttcttgtgtt 19085340  T
Q  98 tttctcaccttca 110  Q
    |||| ||||||||    
T  19085339 tttcacaccttca 19085327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21624398 - 21624284
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||   |||||||| ||||||||| |||||  |||||  ||||||||||  |||||||||| |||| |||| |||||||||  ||||||||    
T  21624398 tcacttcagaagtaaaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaatt-caacccccccttcttgtgt 21624300  T
Q  97 ttttctcaccttcaga 112  Q
    ||||||||||||||||    
T  21624299 ttttctcaccttcaga 21624284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 32543569 - 32543458
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  |||||||||| |||| |||| |||||| ||| ||||||||    
T  32543569 tcacttcagaagtggaactctatctgcttctgatcagtgttttcaggttaggagaaaaagaagaaaaagctaacacaatt-caaccctccttcttgtgtt 32543471  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  32543470 tttctcaccttca 32543458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 10631443 - 10631331
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  |||||||||| |||| || |||||||| ||  ||||||||    
T  10631443 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaa-ttcaaccctccattcttgtgt 10631345  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  10631344 ttttctcaccttca 10631331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 14101287 - 14101400
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccccc-ctcttgtgtt 97  Q
    |||||||| |||  ||||||||| ||||||||| ||||   |||||  ||||||||||| |||||||||| |||| || ||||||||||  |||||||||    
T  14101287 tcacttcataagtagaactctatctgcttctgatcagtattttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaaccccctttcttgtgtt 14101385  T
Q  98 tttctcaccttcaga 112  Q
    |||||||||||||||    
T  14101386 tttctcaccttcaga 14101400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 15532473 - 15532585
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccc--cctcttgtgt 96  Q
    ||||||||||||  |||||||||||||| |||| |||||  |||||  ||||||||||  |||||||||| |||| || |||||||||  | ||||||||    
T  15532473 tcacttcagaagtagaactctatttgctcctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaa-ttcaaccccttcttcttgtgt 15532571  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  15532572 ttttctcaccttca 15532585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 22801449 - 22801338
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||  ||||||||| ||||||||| |||||   | ||  |||| |||||  |||||||||| |||| |||| |||||||| ||||||||||    
T  22801449 tcacttcagaagtagaactctatctgcttctgatcagtgttattagcttaggtgaaaaataagaaaaagctaacacaatt-caacccccttcttgtgttt 22801351  T
Q  99 ttctcaccttcag 111  Q
    |||||||||||||    
T  22801350 ttctcaccttcag 22801338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 10 - 110
Target Start/End: Complemental strand, 19625073 - 19624971
Alignment:
Q  10 aagctgaactctatttgcttctgaacagtgacttcagt--aggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttttctcacc 106  Q
    ||||||||||||||  | |||||||  |||| ||||||  ||| |||||| |||||||||| |||| |||| ||||||||| ||||||||||||||||||    
T  19625073 aagctgaactctatcaggttctgaagtgtgatttcagtttaggtgaaaacgaagaaaaagctaacataatt-caaccccccgtcttgtgtttttctcacc 19624975  T
Q  107 ttca 110  Q
    ||||    
T  19624974 ttca 19624971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25593377 - 25593269
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    |||||||| ||||  |||||||||||||||||| |||||  |||||  ||||||||||| ||||||||   |||| || ||||||||||| |||||||||    
T  25593377 tcacttcataagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaa-ataacacaa-ttcaacccccc-cttgtgttt 25593281  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  25593280 ttctcaccttca 25593269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 16876214 - 16876107
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttt 99  Q
    ||||||||||||| ||||||||| | || |||| |||||  |||||| | |||||||  |||||||| |||||| |||| ||||||||||  ||||||||    
T  16876214 tcacttcagaagcagaactctatctactcctgatcagtgttttcagttaagagaaaaataagaaaaaacaaacataatt-caacccccct--tgtgtttt 16876118  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  16876117 tctcaccttca 16876107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17927050 - 17926995
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaa 56  Q
    |||| ||||||| |||||||||| |||||||||||||||||||| ||| |||||||    
T  17927050 tcacatcagaagttgaactctatctgcttctgaacagtgacttcggtaagagaaaa 17926995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 19833848 - 19833942
Alignment:
Q  17 actctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    ||||||| ||||||||| |||||  |||||| |||||||||  | ||||||| ||||| |||| |||||||||| |||||||||||||||||||||    
T  19833848 actctatctgcttctgatcagtgttttcagttaggagaaaaagatgaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttca 19833942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19623293 - 19623205
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||||||||||| | ||||||||||||||||| |||||  || ||  ||||||||||| |||||||||| |||| || |||||||||||    
T  19623293 tcacttcagaagcaggactctatttgcttctgatcagtgtttttagcttaggagaaaacgaagaaaaagccaacataa-ttcaacccccc 19623205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 24116122 - 24116013
Alignment:
Q  3 acttcagaagctgaactctatttgcttctgaacagtg-acttca--gtaggagaaaacaaagaaaaagcaaacaaaatttcaa--cccccctcttgtgtt 97  Q
    ||||||||||| ||||||||||||||||||| |||||   ||||   ||||||||||| |||||||||| |||| |  |||||  |||||| ||||||||    
T  24116122 acttcagaagcagaactctatttgcttctgaccagtgtttttcaacttaggagaaaacgaagaaaaagccaacaca--ttcaaccccccccccttgtgtt 24116025  T
Q  98 tttctcaccttc 109  Q
    ||||||||||||    
T  24116024 tttctcaccttc 24116013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 9717132 - 9717018
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||| ||||| ||| |||||  ||||   ||||||||||  ||||||| ||||||| |||| ||||| |||  ||||||||    
T  9717132 tcacttcagaagtggaactctatctgcttttgatcagtgttttcaacttaggagaaaaagaagaaaatgcaaacacaatt-caacctccccttcttgtgt 9717034  T
Q  97 ttttctcaccttcaga 112  Q
    ||||||||||||||||    
T  9717033 ttttctcaccttcaga 9717018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 16333035 - 16332923
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgt-t 97  Q
    ||||||||||||  ||||||||| ||||||||| | ||   |||||| |||||||||  |||||||||| |||| |||| |||||||||| ||||||| |    
T  16333035 tcacttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaaaagaagaaaaagccaacacaatt-caaccccccttcttgtgttt 16332937  T
Q  98 tttctcaccttcag 111  Q
    ||||||||||||||    
T  16332936 tttctcaccttcag 16332923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 16528621 - 16528511
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    |||||||||||   ||||||||| ||||||| | |||||  ||||   ||||||||||| |||||||||| |||| |||| |||||||||  ||||||||    
T  16528621 tcacttcagaaatagaactctatctgcttcttatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaatt-caacccccccttcttgtgt 16528523  T
Q  97 ttttctcacctt 108  Q
    ||||||||||||    
T  16528522 ttttctcacctt 16528511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 32756806 - 32756750
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcagattct 116  Q
    |||||||| ||||| |||| |||||||||| |||||||||||||||||||||||||||    
T  32756806 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcagattct 32756750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 20113476 - 20113565
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaaca-gtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||||||||||  ||||||||| ||||||||| || |||  |||||  ||||||||||| ||||||||||||||| || |||||||||||    
T  20113476 tcacttcagaagtagaactctatctgcttctgatcaagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaa-ttcaacccccc 20113565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 21234462 - 21234350
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||| ||||| ||||||||| |||||  |||||  ||||||||||  | |||||||| |||| || |||||||||||  |||||| |    
T  21234462 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaaagaggaaaaagctaacacaa-ttcaaccccccattcttgtat 21234364  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  21234363 ttttctcaccttca 21234350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 83 - 112
Target Start/End: Original strand, 10972370 - 10972399
Alignment:
Q  83 cccccctcttgtgtttttctcaccttcaga 112  Q
    ||||||||||||||||||||||||||||||    
T  10972370 cccccctcttgtgtttttctcaccttcaga 10972399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 14732958 - 14733045
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccccc 87  Q
    |||||||||||||  ||||||||||| |||||| |||||  || ||  ||||||||||| |||||||||| |||| || ||||||||||    
T  14732958 tcacttcagaagcataactctatttgtttctgatcagtgtttttagcttaggagaaaacgaagaaaaagctaacacaa-ttcaaccccc 14733045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 11021363 - 11021309
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttcagat 113  Q
    |||||||| ||||| |||| |||||||||  |||||||||||||||||||||||||    
T  11021363 agaaaaagaaaacacaatt-caacccccccttcttgtgtttttctcaccttcagat 11021309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 115
Target Start/End: Original strand, 16124326 - 16124381
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcagattc 115  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||||| ||||    
T  16124326 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcatattc 16124381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Original strand, 16266243 - 16266271
Alignment:
Q  83 cccccctcttgtgtttttctcaccttcag 111  Q
    |||||||||||||||||||||||||||||    
T  16266243 cccccctcttgtgtttttctcaccttcag 16266271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 25787074 - 25787046
Alignment:
Q  83 cccccctcttgtgtttttctcaccttcag 111  Q
    |||||||||||||||||||||||||||||    
T  25787074 cccccctcttgtgtttttctcaccttcag 25787046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 113
Target Start/End: Complemental strand, 31571820 - 31571766
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttcagat 113  Q
    |||||||| ||||| |||| |||||||||  |||||||||||||||||||||||||    
T  31571820 agaaaaagaaaacacaatt-caacccccccttcttgtgtttttctcaccttcagat 31571766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 69; Significance: 4e-31; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 21199846 - 21199953
Alignment:
Q  3 acttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttttc 101  Q
    |||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||| || ||||||||||| |||||||||||||    
T  21199846 acttcagaagttgaactctatctgcttctgatcagtgacttcagtaggagaaaacgaagaaaaagctaacacaa-ttcaaccccccttcttgtgtttttc 21199944  T
Q  102 tcaccttca 110  Q
    |||||||||    
T  21199945 tcaccttca 21199953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25097874 - 25097981
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacc-cccctcttgtgtttt 99  Q
    ||||||||||||||||| ||||| ||||||||| |||| | |||||||||||||||| ||||||||||||||| || ||||||| ||| |||||||||||    
T  25097874 tcacttcagaagctgaaatctatctgcttctgatcagttatttcagtaggagaaaacgaagaaaaagcaaacataa-ttcaaccacccttcttgtgtttt 25097972  T
Q  100 tctcacctt 108  Q
    |||||||||    
T  25097973 tctcacctt 25097981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 25156966 - 25157073
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacc-cccctcttgtgtttt 99  Q
    ||||||||||||||||| ||||| ||||||||| |||| | |||||||||||||||| ||||||||||||||| || ||||||| ||| |||||||||||    
T  25156966 tcacttcagaagctgaaatctatctgcttctgatcagttatttcagtaggagaaaacgaagaaaaagcaaacataa-ttcaaccacccttcttgtgtttt 25157064  T
Q  100 tctcacctt 108  Q
    |||||||||    
T  25157065 tctcacctt 25157073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 22000862 - 22000969
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttttc 101  Q
    |||||||||  |||||||||||||||||| |||||  |||||  ||||||||||| |||||||||| |||| ||  |||||||||| |||||||||||||    
T  22000862 ttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ctcaaccccccttcttgtgtttttc 22000960  T
Q  102 tcaccttca 110  Q
    |||||||||    
T  22000961 tcaccttca 22000969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 6513261 - 6513373
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc--ccctcttgtgt 96  Q
    ||||||||||||| ||||||||||||||| ||| |||||  |||||  || |||||||| |||||||||| |||| || ||||||||  || ||||||||    
T  6513261 tcacttcagaagcagaactctatttgcttatgatcagtgttttcagcttaagagaaaacgaagaaaaagccaacacaa-ttcaacccctccttcttgtgt 6513359  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  6513360 ttttctcaccttca 6513373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 88
Target Start/End: Original strand, 21207643 - 21207726
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    |||| |||||||||||||| ||||||||| |||||||||||| |||||||||| ||||| |||| |||| ||||  ||||||||    
T  21207643 ttcataagctgaactctatctgcttctgatcagtgacttcagaaggagaaaacgaagaagaagctaacacaattcaaacccccc 21207726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 31487500 - 31487403
Alignment:
Q  15 gaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    ||||||||||||||||||| |||||  |||||  ||||||||||| |||||||| | |||| |||| |||||||||| |||||||||||||||||||||    
T  31487500 gaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaaccaacacaatt-caaccccccttcttgtgtttttctcaccttca 31487403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7746527 - 7746639
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtg-t 96  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| ||||||||||||||| || ||||||||||| | ||||| |    
T  7746527 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcaaacacaa-ttcaaccccccttattgtgtt 7746625  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  7746626 ttttctcaccttca 7746639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 90264 - 90375
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgactt-cag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtt 97  Q
    ||||||| ||||| ||||||||||||||||||| |||||  || |||  ||||||||||| |||||||||| |||| |||| ||||| |  |||||||||    
T  90264 tcacttcggaagcagaactctatttgcttctgatcagtgtttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caacctcattcttgtgtt 90362  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  90363 tttctcaccttca 90375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6498620 - 6498511
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||  ||||||||| ||||||| | |||||  |||||  ||||||||||| |||||||||| |||| |||| |||||||| ||||||||||    
T  6498620 tcacttcagaagtagaactctatctgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caaccccc-tcttgtgttt 6498523  T
Q  99 ttctcaccttca 110  Q
    | ||||||||||    
T  6498522 tactcaccttca 6498511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 30116708 - 30116816
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttc 101  Q
    |||||||||| ||||||||| ||||||||| | ||   |||||| |||||||||  |||||||||| |||| ||||| | ||||||| ||||||||||||    
T  30116708 cttcagaagcagaactctatctgcttctgatctgtattttcagttaggagaaaaagaagaaaaagccaacagaatttaacccccccttcttgtgtttttc 30116807  T
Q  102 tcaccttca 110  Q
    |||||||||    
T  30116808 tcaccttca 30116816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 19546361 - 19546471
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    |||||||||||||  |||| ||||||||||||| ||||| ||||||  |||||| |||| |||||||| | |||| || ||||||||||  | |||||||    
T  19546361 tcacttcagaagcataactatatttgcttctgatcagtgtcttcagcttaggaggaaacgaagaaaaaaccaacacaa-ttcaaccccc--cctgtgttt 19546457  T
Q  99 ttctcaccttcaga 112  Q
    ||||||||||||||    
T  19546458 ttctcaccttcaga 19546471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 3246297 - 3246403
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttc 101  Q
    |||||||||  ||||||||| ||||||||| | || | |||||| |||||||||  ||||||||| ||||| |||| |||||||||| ||||||||||||    
T  3246297 cttcagaagtagaactctatctgcttctgatctgt-atttcagttaggagaaaaagaagaaaaagaaaacacaatt-caaccccccttcttgtgtttttc 3246394  T
Q  102 tcaccttca 110  Q
    |||||||||    
T  3246395 tcaccttca 3246403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 28465225 - 28465287
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||| ||||||||||| |||| |||| |||||||| |||||||||||||| |||||||    
T  28465225 taggagaaaaaaaagaaaaagccaacacaatt-caacccccttcttgtgtttttcttaccttca 28465287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21076014 - 21076125
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc-ccctcttgtgtt 97  Q
    ||||||||||||  |||||| || ||||||||| |||||   ||||  ||||||||||| |||||||||| |||| || |||||||| || |||||||||    
T  21076014 tcacttcagaagtagaactcaatctgcttctgatcagtgttatcagcttaggagaaaacgaagaaaaagctaacataa-ttcaaccctccttcttgtgtt 21076112  T
Q  98 tttctcaccttca 110  Q
    |||||||| ||||    
T  21076113 tttctcacattca 21076125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21100581 - 21100692
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||| |||  ||||||||| ||||||||| |||||  |||||  ||||||||||  |||||||| | |||| |||| |||||||||| |||||| |    
T  21100581 tcacttcaaaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaatt-caaccccccttcttgtgct 21100679  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  21100680 tttctcaccttca 21100692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 23413807 - 23413913
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    |||||||| |||| ||||||||||| ||||||  |||||  |||||  ||||||||||| |||||||||| |||| || |||||| ||||  ||||||||    
T  23413807 tcacttcaaaagcagaactctatttacttctggtcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaactccccattcttgtgt 23413905  T
Q  97 ttttctca 104  Q
    ||||||||    
T  23413906 ttttctca 23413913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 11993194 - 11993107
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag-taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||||||||||| ||||||||| |||| |||| |||||  || || ||||||||||  ||||||||||||||| || |||||||||||    
T  11993194 tcacttcagaagcagaactctatctgctcctgatcagtgtttttagttaggagaaaaagaagaaaaagcaaacacaa-ttcaacccccc 11993107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 13546358 - 13546471
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||| ||||||||| || ||  |||||  ||| ||||||| ||||||||| ||||| |||| |||||| |   ||||||||    
T  13546358 tcacttcagaagtagaactctatctgcttctgatcattgttttcagcttagaagaaaacgaagaaaaagtaaacacaatt-caacccactcttcttgtgt 13546456  T
Q  97 ttttctcaccttcag 111  Q
    |||||||||||||||    
T  13546457 ttttctcaccttcag 13546471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 33932569 - 33932460
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgttttt 100  Q
    ||||||||  ||| ||||||||||||||| |||||  |||||  ||| |||||| ||||||||||| |||| || |||||||||||  ||||||||||||    
T  33932569 ttcagaagtagaaatctatttgcttctgatcagtgttttcagcttagaagaaaaaaaagaaaaagccaacacaa-ttcaacccccccttcttgtgttttt 33932471  T
Q  101 -ctcaccttca 110  Q
     ||||||||||    
T  33932470 cctcaccttca 33932460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 111
Target Start/End: Original strand, 35932840 - 35932950
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacag-tgacttcag-taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgtttt 99  Q
    |||||||||  ||||||||| ||||||||||| | | | ||||| ||||||||||  |||||||||| |||| |||| ||||| |||  |||||||||||    
T  35932840 cttcagaagtagaactctatctgcttctgaactgcttatttcagataggagaaaaagaagaaaaagctaacacaatt-caacctccccttcttgtgtttt 35932938  T
Q  100 tctcaccttcag 111  Q
    ||||||||||||    
T  35932939 tctcaccttcag 35932950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 26120710 - 26120760
Alignment:
Q  59 aagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||| |||| |||| |||||||| ||||||||||||||||||||||    
T  26120710 aagaaaaagctaacacaatt-caacccccttcttgtgtttttctcaccttca 26120760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 37395473 - 37395362
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||||||   ||| ||||| ||||||| | |||||  |||||  |||||||| |  ||||||||| ||||| |||| |||||||||| ||||||||    
T  37395473 tcacttcagaaatagaattctatctgcttctaatcagtgttttcagcttaggagaagaagaagaaaaagtaaacacaatt-caaccccccttcttgtgtt 37395375  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  37395374 tttctcaccttca 37395362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 30742167 - 30742135
Alignment:
Q  78 ttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||| ||||||||||||||||||||||    
T  30742167 ttcaacccccttcttgtgtttttctcaccttca 30742135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 33021895 - 33021844
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcag 111  Q
    ||||||||| |||| |||| |||||||||| ||||||||||||||||||||||    
T  33021895 agaaaaagccaacacaatt-caaccccccttcttgtgtttttctcaccttcag 33021844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2589 - 2675
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||    
T  2589 tcacttcagaagctgaactctatctgcttctgaacagtgacttcagtaggagaaaacgaagaaaaagcaaacacaa-ttcaacccccc 2675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0081 (Bit Score: 67; Significance: 6e-30; HSPs: 1)
Name: scaffold0081
Description:

Target: scaffold0081; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 13300 - 13191
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctctt-gtgtttt 99  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||||||| || |||||||    
T  13300 tcacttcagaagttgaactctatctgcttctgatcagtgacttcagtaggagaaaacgaagaaaaagctaacacaatt-caacccccctttttgtgtttt 13202  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  13201 tctcaccttca 13191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 4e-25; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 3 - 110
Target Start/End: Original strand, 21192659 - 21192767
Alignment:
Q  3 acttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgttttt 100  Q
    ||||||||||||||||||||| ||||| ||| ||||||||||||||||||||||| ||||||||||  ||| || |||||||||||  ||||||||||||    
T  21192659 acttcagaagctgaactctatctgcttatgatcagtgacttcagtaggagaaaacgaagaaaaagcttacacaa-ttcaacccccccttcttgtgttttt 21192757  T
Q  101 ctcaccttca 110  Q
    | ||||||||    
T  21192758 cgcaccttca 21192767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17025775 - 17025884
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttt 99  Q
    |||||| ||||  |||||||||| ||||||||| ||||||||| |||||||||||||||||||||| | |||| || ||||||||||| |||||||||||    
T  17025775 tcactttagaaattgaactctatctgcttctgatcagtgacttaagtaggagaaaacaaagaaaaatctaacacaa-ttcaaccccccttcttgtgtttt 17025873  T
Q  100 tctcaccttca 110  Q
    |||||| ||||    
T  17025874 tctcactttca 17025884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 18614218 - 18614108
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgttt 98  Q
    |||| |||||||||||||||||| ||||| ||| ||||||||||||||||||||||| |||||||||| |||| |||| |||||| |   || |||||||    
T  18614218 tcacatcagaagctgaactctatctgcttttgatcagtgacttcagtaggagaaaacgaagaaaaagctaacataatt-caaccctcacttcctgtgttt 18614120  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  18614119 ttctcaccttca 18614108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12625321 - 12625430
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaaccc-ccctcttgtgtttt 99  Q
    |||||||||||| |||||||||| |||||||||  |||||||| | ||||||||||| |||||||| | |||| || |||||||| || |||||||||||    
T  12625321 tcacttcagaagttgaactctatctgcttctgatgagtgactttaataggagaaaacgaagaaaaaactaacacaa-ttcaaccctccttcttgtgtttt 12625419  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  12625420 tctcaccttca 12625430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7309096 - 7308986
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgttt 98  Q
    |||||| |||||| ||| ||||||||||||||| |||||  |||||| |||||||||| |||||||| | |||| |||| |||||||||| |||||||||    
T  7309096 tcactttagaagcagaattctatttgcttctgatcagtgttttcagttaggagaaaacgaagaaaaaaccaacacaatt-caaccccccttcttgtgttt 7308998  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  7308997 ttctcaccttca 7308986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22202654 - 22202764
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt--aggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    |||| |||||||| ||||||||||||||| ||| |||||  ||||||  |||||||||| |||||||||  |||| |||| ||||||||  |||||||||    
T  22202654 tcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaagataacacaatt-caaccccctccttgtgttt 22202752  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  22202753 ttctcaccttca 22202764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 30892371 - 30892260
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||| |||||  ||||||||||||||||||| |||||  |||||  ||| ||||| | |||||||||| |||| |||| |||||||||| ||||||||    
T  30892371 tcactttagaagtagaactctatttgcttctgatcagtgttttcagcttagaagaaatcgaagaaaaagctaacacaatt-caaccccccttcttgtgtt 30892273  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  30892272 tttctcaccttca 30892260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 16 - 112
Target Start/End: Original strand, 14294070 - 14294166
Alignment:
Q  16 aactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttcaga 112  Q
    |||||||| | ||||||| |||||  |||||  ||||||||||  ||||||||||||||| ||||  ||||||| ||||||||||||||||||||||||    
T  14294070 aactctatctccttctgatcagtgttttcagcttaggagaaaatgaagaaaaagcaaacacaatt--aacccccttcttgtgtttttctcaccttcaga 14294166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 17017877 - 17017822
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaa 56  Q
    |||||||||||||||||||||||  ||||||||| |||||||||||||| ||||||    
T  17017877 tcacttcagaagctgaactctatcagcttctgaatagtgacttcagtagaagaaaa 17017822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 25449360 - 25449469
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttt 99  Q
    ||||||||||||   |||||||| ||||||||| |||||  |||||| |||||||||  || ||| ||| |||| |||| |||||||| |||||||||||    
T  25449360 tcacttcagaagtataactctatctgcttctgatcagtgttttcagttaggagaaaaagaaaaaatagccaacacaatt-caacccccttcttgtgtttt 25449458  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  25449459 tctcaccttca 25449469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 114
Target Start/End: Complemental strand, 22153132 - 22153017
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt--aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| ||  |  |||||   |||||||||  |||||||||| |||| |||| |||||||||| ||||||||    
T  22153132 tcacttcagaagtagaactctatctgcttctgatcaaagttttcagctaaggagaaaaagaagaaaaagccaacacaatt-caaccccccttcttgtgtt 22153034  T
Q  98 tttctcaccttcagatt 114  Q
    |||||||||||||||||    
T  22153033 tttctcaccttcagatt 22153017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 21983902 - 21983792
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacag-tgacttcag-taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgtttt 99  Q
    |||||||||  ||||||||| ||||||||||| | | | ||||| ||||||||||  ||||||||| ||||| |||| |||||||||  |||||||||||    
T  21983902 cttcagaagtagaactctatctgcttctgaactgcttatttcagataggagaaaaagaagaaaaagaaaacacaatt-caaccccccgttcttgtgtttt 21983804  T
Q  100 tctcaccttcag 111  Q
    ||||||||||||    
T  21983803 tctcaccttcag 21983792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 110
Target Start/End: Original strand, 20959819 - 20959911
Alignment:
Q  17 actctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    ||||||| ||||||||| |||||  |||||  ||||||||||| |||||||| | |||| |||| ||||||||||  |||||||||||||||||||    
T  20959819 actctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaatt-caacccccct--tgtgtttttctcaccttca 20959911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 12283695 - 12283590
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttct 102  Q
    ||||||||  |||||||| |||||| ||| |||||  |||||  ||||||||||| |||||||||| |||| |||| ||||  || ||||||||||||||    
T  12283695 ttcagaaggagaactctacttgcttatga-cagtgttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caacatccttcttgtgtttttct 12283598  T
Q  103 caccttca 110  Q
    ||||||||    
T  12283597 caccttca 12283590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 1577155 - 1577042
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  || |||||||  |||||||| | |||| || ||||||||||| || | ||||    
T  1577155 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaaaccaacacaa-ttcaaccccccttcgtatgtt 1577057  T
Q  98 tttctcaccttcaga 112  Q
    |||||||||||||||    
T  1577056 tttctcaccttcaga 1577042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 78 - 112
Target Start/End: Complemental strand, 22637490 - 22637456
Alignment:
Q  78 ttcaacccccctcttgtgtttttctcaccttcaga 112  Q
    |||||||||| ||||||||||||||||||||||||    
T  22637490 ttcaacccccttcttgtgtttttctcaccttcaga 22637456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 39194924 - 39194974
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||| ||||| ||||  | ||||||||||||||||||||||||||||    
T  39194924 agaaaaagaaaacacaattcaaccccccctcttgtgtttttctcaccttca 39194974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 22202532 - 22202600
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaag 67  Q
    |||| |||||||| ||||||||||||||| ||| |||||  |||||  ||||||||||| |||||||||    
T  22202532 tcacgtcagaagcagaactctatttgcttatgatcagtgttttcagtttaggagaaaacgaagaaaaag 22202600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 22428115 - 22428190
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatt 78  Q
    ||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| ||||||||| ||||| ||||    
T  22428115 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaatt 22428190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 23053609 - 23053577
Alignment:
Q  78 ttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||| ||||||||||||||||||||||    
T  23053609 ttcaacccccttcttgtgtttttctcaccttca 23053577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33257141 - 33257247
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||| ||||  |||| ||||||||||||| | |||  |||||  ||||||||| | |||||||||| |||| |||| |||| ||||| ||||||||    
T  33257141 tcacttcaaaagcataactatatttgcttctgatcggtgttttcagcttaggagaaagcgaagaaaaagctaacacaatt-caactccccttcttgtgtt 33257239  T
Q  98 tttctcac 105  Q
    ||||||||    
T  33257240 tttctcac 33257247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 105
Target Start/End: Original strand, 33277313 - 33277419
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||| ||||  |||| ||||||||||||| | |||  |||||  ||||||||| | |||||||||| |||| |||| |||| ||||| ||||||||    
T  33277313 tcacttcaaaagcataactatatttgcttctgatcggtgttttcagcttaggagaaagcgaagaaaaagctaacacaatt-caactccccttcttgtgtt 33277411  T
Q  98 tttctcac 105  Q
    ||||||||    
T  33277412 tttctcac 33277419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 42283872 - 42283840
Alignment:
Q  78 ttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||| ||||||||||||||||||||||    
T  42283872 ttcaacccccttcttgtgtttttctcaccttca 42283840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 2503 - 2403
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttt 99  Q
    ||||| || |||||||||||||| ||||||||| ||| ||||||||||| ||||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  2503 tcactacataagctgaactctatctgcttctgatcagggacttcagtagaagaaaacaaagaaaaagcaaacacaatt-caaccccccttcttgtgtttt 2405  T
Q  100 tc 101  Q
    ||    
T  2404 tc 2403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 58; Significance: 2e-24; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 10884022 - 10884133
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    |||||||||||||  |||||||||||||||||| |||||  |||||  |||||||||||||||||||||| |||| || ||||||||||| |||||||||    
T  10884022 tcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacaaagaaaaagctaacacaa-ttcaaccccccttcttgtgtt 10884120  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  10884121 tttctcaccttca 10884133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 13261527 - 13261636
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    ||||||||||||| ||||||||||||||||||| || ||  |||||  ||||||||||| ||||||||| ||||| || ||||||||||| |||||||||    
T  13261527 tcacttcagaagcagaactctatttgcttctgatcaatgtgttcagcttaggagaaaacgaagaaaaagaaaacacaa-ttcaaccccccttcttgtgtt 13261625  T
Q  98 tttctcacctt 108  Q
    |||||||||||    
T  13261626 tttctcacctt 13261636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19237913 - 19238023
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttt 99  Q
    |||||||||||| |||||||||||||||| | |  ||||||||||||| |||||||  ||||||||| ||||| || ||||||||||| |||| ||||||    
T  19237913 tcacttcagaagttgaactctatttgcttataactagtgacttcagtaagagaaaatgaagaaaaagaaaacacaa-ttcaaccccccttcttttgtttt 19238011  T
Q  100 tctcaccttcag 111  Q
    ||||||||||||    
T  19238012 tctcaccttcag 19238023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13902507 - 13902616
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacc-cccctcttgtgtttt 99  Q
    |||| ||||||| |||||||||||||||||||| || ||||||  |||||||||||| |||||||||| |||| || ||||||| ||| |||||||||||    
T  13902507 tcacatcagaagttgaactctatttgcttctgatcattgacttatgtaggagaaaacgaagaaaaagctaacacaa-ttcaacctcccttcttgtgtttt 13902605  T
Q  100 tctcaccttca 110  Q
    |||| ||||||    
T  13902606 tctccccttca 13902616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4493850 - 4493739
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||    
T  4493850 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caaccccccttcttgtgtt 4493752  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  4493751 tttctcaccttca 4493739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 33604210 - 33604099
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||| |||||||| ||| ||||||||||||||| |||||  |||||  ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||    
T  33604210 tcacgtcagaagcagaattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagccaacacaatt-caaccccccttcttgtgtt 33604112  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  33604111 tttctcaccttca 33604099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 21211434 - 21211542
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaac----ccccctcttgtgttttt 100  Q
    ||||||||||||||||||| | ||||||| ||| ||||||||||||||||||| || ||||||| |||| || ||||||    |||| ||||||||||||    
T  21211434 ttcagaagctgaactctatctacttctgatcagcgacttcagtaggagaaaacgaataaaaagctaacacaa-ttcaacccctccccttcttgtgttttt 21211532  T
Q  101 ctcaccttca 110  Q
    ||||||||||    
T  21211533 ctcaccttca 21211542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 39285393 - 39285503
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttt 99  Q
    ||||||||||||||||||||||| | |||||||  | |||||||||||||||||||  ||||||||   |||| ||||  | |||||| |||||||||||    
T  39285393 tcacttcagaagctgaactctatctacttctgattactgacttcagtaggagaaaatgaagaaaaaagtaacacaattcaatccccccttcttgtgtttt 39285492  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  39285493 tctcaccttca 39285503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 5001714 - 5001826
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaac-ccccctcttgtgtt 97  Q
    ||||||||||||| ||||| ||||||||||||| |||||  |||||  ||||||||||| |||||||||| |||| ||||| | | || | |||||||||    
T  5001714 tcacttcagaagcagaactttatttgcttctgatcagtgctttcagcttaggagaaaacgaagaaaaagctaacataatttaacctccacttcttgtgtt 5001813  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  5001814 tttctcaccttca 5001826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 16315389 - 16315497
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc--ccctcttgtgt 96  Q
    ||||||||||||| ||||||||||||||||||| |||||  |||||  ||||||||||| |||||||| | |||| || ||||||||  || ||||||||    
T  16315389 tcacttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaacctaacacaa-ttcaacccctccttcttgtgt 16315487  T
Q  97 ttttctcacc 106  Q
    ||||||||||    
T  16315488 ttttctcacc 16315497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12367609 - 12367720
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    ||||||||||||  ||||||||||||||||||| |||||  ||||   ||||||||||| |||||||||  |||| || ||||||||||| |||||||||    
T  12367609 tcacttcagaagaagaactctatttgcttctgatcagtgttttcaccttaggagaaaacgaagaaaaagataacacaa-ttcaaccccccgtcttgtgtt 12367707  T
Q  98 tttctcaccttca 110  Q
    ||||||| |||||    
T  12367708 tttctcaacttca 12367720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13259295 - 13259406
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    |||||| |||||| |||||||||||  |||||| |||||   ||||  ||||||||||| ||||||||| ||||| || ||||||||||| |||||||||    
T  13259295 tcactttagaagcagaactctatttatttctgatcagtgttgtcagcttaggagaaaacgaagaaaaagaaaacacaa-ttcaaccccccttcttgtgtt 13259393  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  13259394 tttctcaccttca 13259406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14186992 - 14186880
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||| ||||| ||||||||| |||||  |||||  ||||||||||  ||||||||| ||||| |||| |||||||||  ||||||||    
T  14186992 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcctaggagaaaaagaagaaaaagtaaacacaatt-caacccccccttcttgtgt 14186894  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  14186893 ttttctcaccttca 14186880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 16557466 - 16557575
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttc 101  Q
    ||||||||  ||||||||| ||||||||| |||||  |||||  ||||||| ||  |||||||||| |||| |||| |||||||||| ||||||||||||    
T  16557466 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaatt-caaccccccttcttgtgtttttc 16557564  T
Q  102 tcaccttcaga 112  Q
    |||||||||||    
T  16557565 tcaccttcaga 16557575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 112
Target Start/End: Complemental strand, 16608196 - 16608087
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttc 101  Q
    ||||||||  ||||||||| ||||||||| |||||  |||||  ||||||| ||  |||||||||| |||| |||| |||||||||| ||||||||||||    
T  16608196 ttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagataaagaagaaaaagccaacacaatt-caaccccccttcttgtgtttttc 16608098  T
Q  102 tcaccttcaga 112  Q
    |||||||||||    
T  16608097 tcaccttcaga 16608087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 13424769 - 13424831
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagta-ggagaaaacaaaga 62  Q
    ||||||||||||||||||||||| ||||||||| ||||||| |||||| ||||||||| ||||    
T  13424769 tcacttcagaagctgaactctatatgcttctgatcagtgacctcagtatggagaaaacgaaga 13424831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 13731528 - 13731616
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||||||||||| ||||||||||||||||||| | |||  |||||  ||||||||||| |||||||||| |||| || |||||||||||    
T  13731528 tcacttcagaagcagaactctatttgcttctgatctgtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaacccccc 13731616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 30025192 - 30025128
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttca 110  Q
    ||||||||||| ||||||||||||||| |||| |||||||||  ||||||||||||||||||||||    
T  30025192 taggagaaaacgaagaaaaagcaaacacaatt-caacccccccttcttgtgtttttctcaccttca 30025128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11792176 - 11792065
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  |||| |||| ||||||||| |||||  ||||   ||||||||||| |||||||||  |||| |||| |||||||||| ||||||||    
T  11792176 tcacttcagaagtagaacactatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagataacacaatt-caaccccccttcttgtgtt 11792078  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  11792077 tttctcaccttca 11792065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 21284226 - 21284337
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||||||   ||||||||| ||||||||| |||||  |||||  ||||| |||||  |||||||| ||||| |||| |||||||||| ||||||||    
T  21284226 tcacttcagaaatagaactctatctgcttctgatcagtgttttcagcttaggaaaaaacggagaaaaagtaaacacaatt-caaccccccttcttgtgtt 21284324  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  21284325 tttctcaccttca 21284337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29936197 - 29936301
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttca--gtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||| ||||||||||||||||||| || ||  ||||   || |||||||| |||||||||||||||      ||||||||| |||||||||    
T  29936197 tcacttcagaagcagaactctatttgcttctgatcaatgttttcatcttacgagaaaacgaagaaaaagcaaaca------caacccccc-cttgtgttt 29936289  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  29936290 ttctcaccttca 29936301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9099110 - 9099166
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaac 57  Q
    |||||||| |||||||| ||||| ||||||||| ||||||||||||||||| |||||    
T  9099110 tcacttcaaaagctgaattctatctgcttctgatcagtgacttcagtaggaaaaaac 9099166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 9099924 - 9099980
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaac 57  Q
    |||||||| |||||||| ||||| ||||||||| ||||||||||||||||| |||||    
T  9099924 tcacttcaaaagctgaattctatctgcttctgatcagtgacttcagtaggaaaaaac 9099980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 114
Target Start/End: Complemental strand, 8182215 - 8182149
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttcagatt 114  Q
    ||||||||||  |||||||||  |||| |||| |||||||| ||||||||||||||||||||||||||    
T  8182215 taggagaaaaacaagaaaaaggcaacacaatt-caacccccttcttgtgtttttctcaccttcagatt 8182149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11318701 - 11318589
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc--ccctcttgtgt 96  Q
    ||||||||||||| ||||||||||| ||||||| |||||  |||||  ||| ||||||| || ||||||| | || || ||||||||  || ||||||||    
T  11318701 tcacttcagaagccgaactctattttcttctgatcagtgttttcagcttagaagaaaactaaaaaaaagctagcacaa-ttcaacccctccttcttgtgt 11318603  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  11318602 ttttctcaccttca 11318589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 15705349 - 15705458
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcag-taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtg--tttt 99  Q
    |||||||||  ||||||||||||||||||| | |||  ||||| ||||||||||  |||||||||| |||| || ||||||||||| |||||||  ||||    
T  15705349 cttcagaagtagaactctatttgcttctgatctgtgttttcagttaggagaaaaagaagaaaaagccaacacaa-ttcaaccccccttcttgtgtttttt 15705447  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  15705448 tctcaccttca 15705458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 21691730 - 21691615
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc---tcttgtg 95  Q
    ||||||||||||  ||||| ||| ||||||||| |||||  |||||  ||||||||||   ||||||||| |||| |||| |||||||||   |||||||    
T  21691730 tcacttcagaagtagaactttatctgcttctgatcagtgttttcagcttaggagaaaatgtagaaaaagccaacacaatt-caaccccccctttcttgtg 21691632  T
Q  96 tttttctcaccttcaga 112  Q
    |||||||||||||||||    
T  21691631 tttttctcaccttcaga 21691615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 88
Target Start/End: Complemental strand, 13645753 - 13645669
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||||||| ||||||||||||||||||| | |||  |||||  ||||||||||| |||||||||| |||| || |||||||||||    
T  13645753 ttcagaagcagaactctatttgcttctgatcggtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaacccccc 13645669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 1292311 - 1292240
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttcagattctt 117  Q
    ||||||||||  |||||||||| |||| |||| ||||| |||  |||||||||||||||||||||||||||||    
T  1292311 taggagaaaaagaagaaaaagctaacacaatt-caacctccccttcttgtgtttttctcaccttcagattctt 1292240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13027803 - 13027914
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacc-cccctcttgtgtt 97  Q
    |||||| |||||  ||||||||| ||||||||| || ||  ||| |  ||||||||||  ||||||||||||||| || ||||||| ||| |||||||||    
T  13027803 tcactttagaagtagaactctatctgcttctgatcaatgttttcggcttaggagaaaatgaagaaaaagcaaacacaa-ttcaacctcccttcttgtgtt 13027901  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  13027902 tttctcaccttca 13027914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 110
Target Start/End: Complemental strand, 2499330 - 2499223
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttct 102  Q
    ||||||||  ||||||||| |||||||||  ||||  |||||  ||||||||||  |||||||||  |||| ||||  | ||||| ||||||||||||||    
T  2499330 ttcagaagtagaactctatctgcttctgattagtgttttcagcttaggagaaaatgaagaaaaagttaacacaattcaatcccccttcttgtgtttttct 2499231  T
Q  103 caccttca 110  Q
    ||||||||    
T  2499230 caccttca 2499223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13302167 - 13302100
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaa 66  Q
    ||||||||||||| |||||||||||||||||||  ||||  |||||  ||||||||||| ||||||||    
T  13302167 tcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaa 13302100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 13138777 - 13138889
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||| ||||||||| || ||  |||||  || |||||||  |||||||||| |||| |||| ||||||||   ||||||||    
T  13138777 tcacttcagaagtagaactctatctgcttctgatcaatgttttcagcataagagaaaaagaagaaaaagccaacacaatt-caaccccctcttcttgtgt 13138875  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  13138876 ttttctcaccttca 13138889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 114
Target Start/End: Original strand, 2914511 - 2914623
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaac-ccccctcttgtgttttt 100  Q
    |||||||||| ||||||||||||||||||| |||||  |||||  |||||| |||| |||||||||| |||| ||||  | | |||| |||||| |||||    
T  2914511 cttcagaagcagaactctatttgcttctgatcagtgttttcagcttaggag-aaacgaagaaaaagctaacacaattcaatctccccttcttgttttttt 2914609  T
Q  101 ctcaccttcagatt 114  Q
    || || ||||||||    
T  2914610 cttacattcagatt 2914623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 3921696 - 3921650
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt 47  Q
    ||||||||||||||||||||||| ||||| ||||  |||||||||||    
T  3921696 tcacttcagaagctgaactctatctgcttatgaattgtgacttcagt 3921650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 8933003 - 8932954
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||| ||||| |||| |||||||| ||||||||||||||||||||||    
T  8933003 agaaaaagaaaacacaatt-caacccccttcttgtgtttttctcaccttca 8932954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 13879449 - 13879361
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  || |||||||  ||||||||||||||| || |||||||||||    
T  13879449 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcataagagaaaaagaagaaaaagcaaacacaa-ttcaacccccc 13879361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16317448 - 16317517
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagc 68  Q
    ||||||||||||| ||||| ||||||||||||| |||||  |||||  || |||||||| ||||||||||    
T  16317448 tcacttcagaagcagaactttatttgcttctgatcagtgttttcagcttatgagaaaacgaagaaaaagc 16317517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 59 - 111
Target Start/End: Original strand, 1559955 - 1560007
Alignment:
Q  59 aagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcag 111  Q
    ||||||||| ||||| |||| |||||||||| ||||||||||||||||||||||    
T  1559955 aagaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcag 1560007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 112
Target Start/End: Original strand, 22580110 - 22580220
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctc--ttgtgttttt 100  Q
    ||||||||  ||||| ||| ||||| ||| |||||  |||||  ||||||||||  |||||||||| |||| |||| ||||||||| |  ||||||||||    
T  22580110 ttcagaagtagaactttatctgcttttgatcagtgttttcagcataggagaaaaagaagaaaaagccaacacaatt-caaccccccccccttgtgttttt 22580208  T
Q  101 ctcaccttcaga 112  Q
    ||||||||||||    
T  22580209 ctcaccttcaga 22580220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 58 - 110
Target Start/End: Original strand, 3779533 - 3779584
Alignment:
Q  58 aaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    ||||||||||| |||| |||| |||||||| |||| |||||||||||||||||    
T  3779533 aaagaaaaagctaacacaatt-caacccccttcttatgtttttctcaccttca 3779584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 6045143 - 6045194
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcag 111  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||||||    
T  6045143 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcag 6045194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 13681601 - 13681534
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaa 66  Q
    ||||||||||||| ||||||||||||||||| | || ||  |||||  ||||||||||| ||||||||    
T  13681601 tcacttcagaagcagaactctatttgcttctaatcaatgttttcagcttaggagaaaacgaagaaaaa 13681534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 18418611 - 18418583
Alignment:
Q  83 cccccctcttgtgtttttctcaccttcag 111  Q
    |||||||||||||||||||||||||||||    
T  18418611 cccccctcttgtgtttttctcaccttcag 18418583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 28623205 - 28623284
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatt 78  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  |||||||||| |||| ||||    
T  28623205 tcacttcagaagtagaactctatctgcttctgatcagtgtgttcagcttaggagaaaaagaagaaaaagccaacacaatt 28623284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Original strand, 48063740 - 48063772
Alignment:
Q  78 ttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||| ||||||||||||||||||||||    
T  48063740 ttcaacccccttcttgtgtttttctcaccttca 48063772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 58; Significance: 2e-24; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19889788 - 19889899
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    ||||||||||||| ||||||||||||||||| | |||||  |||||  ||||||||||| |||||||||| ||||||| ||||||||||| |||||||||    
T  19889788 tcacttcagaagcagaactctatttgcttctaatcagtgttttcagcttaggagaaaacgaagaaaaagctaacaaaa-ttcaaccccccttcttgtgtt 19889886  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  19889887 tttctcaccttca 19889899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 12967621 - 12967511
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaa--cccccctcttgtgttt 98  Q
    ||||||||||||||||| ||||||| | |||||| ||||||||||| |||||||||| |||||||||| |||| || |||||  ||||| ||||||||||    
T  12967621 tcacttcagaagctgaattctattttcctctgaatagtgacttcagcaggagaaaacgaagaaaaagctaacacaa-ttcaactcccccttcttgtgttt 12967523  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  12967522 ttctcaccttca 12967511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 6252712 - 6252657
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaa 56  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  6252712 tcacttcagaagctgaactctatctgcttctgaacagtgacttcagtaggagaaaa 6252657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 19250239 - 19250349
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccc-cctcttgtgtttt 99  Q
    ||||||||||||  ||||||||| ||||| |||  |||||||||||||||||||||| ||| |||||| |||| || ||||||||| | |||||||||||    
T  19250239 tcacttcagaagtggaactctatctgcttttgattagtgacttcagtaggagaaaacgaagtaaaagctaacacaa-ttcaacccctcttcttgtgtttt 19250337  T
Q  100 tctcaccttcag 111  Q
    ||||||||||||    
T  19250338 tctcaccttcag 19250349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 26418572 - 26418658
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    |||||||||||| | |||||||| ||||| | ||||||||||||||||||||||||| ||||||||||||||| || |||||||||||    
T  26418572 tcacttcagaagttcaactctatctgctttttaacagtgacttcagtaggagaaaacgaagaaaaagcaaacacaa-ttcaacccccc 26418658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14310986 - 14310877
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacc-cccctcttgtgtttt 99  Q
    ||||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||| ||||||||  ||||| || ||||||| ||| |||||| ||||    
T  14310986 tcacttcagaagctggactctatctgcttctgatcagtgatttcagtaggagaaaacgaagaaaaataaaacacaa-ttcaacctcccttcttgtatttt 14310888  T
Q  100 tctcaccttca 110  Q
    | |||||||||    
T  14310887 tgtcaccttca 14310877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 15902503 - 15902393
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||| ||||| ||||||| ||||| |||||  |||||  ||||||||||  |||||||||| |||| |||| |||||||| ||||||||||    
T  15902503 tcacttcagaagcagaactttatttgcctctgatcagtgttttcagcttaggagaaaaagaagaaaaagctaacacaatt-caacccccttcttgtgttt 15902405  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  15902404 ttctcaccttca 15902393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 106
Target Start/End: Complemental strand, 6174599 - 6174498
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttt 99  Q
    |||||| |||||||||||||||| ||||||||||||||||||||| |||||||    |||||||||| |||| | |  |||||||||| |||||||||||    
T  6174599 tcactttagaagctgaactctatctgcttctgaacagtgacttcaataggaga----aaagaaaaag-aaaccacaactcaaccccccttcttgtgtttt 6174505  T
Q  100 tctcacc 106  Q
    |||||||    
T  6174504 tctcacc 6174498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 14063893 - 14063999
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttttt 100  Q
    |||| |||||||| ||||||| | | ||| ||| | ||||||||||||||||||||||||||||| |  |||| || |||||||||  ||||||||||||    
T  14063893 tcacatcagaagcggaactctttctacttttgatcggtgacttcagtaggagaaaacaaagaaaatgttaacacaa-ttcaacccctttcttgtgttttt 14063991  T
Q  101 ctcacctt 108  Q
    ||||||||    
T  14063992 ctcacctt 14063999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 14954716 - 14954607
Alignment:
Q  3 acttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttt 99  Q
    ||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  |||||||||| |||| |||| |||||||||| ||||||||||    
T  14954716 acttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaatt-caaccccccttcttgtgtttt 14954618  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  14954617 tctcaccttca 14954607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 110
Target Start/End: Original strand, 23539080 - 23539185
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacc-cccctcttgtgtttttctc 103  Q
    ||||||||||||| ||||| ||||| |||  |||||||||| ||||| ||||| |||||||| | |||| || ||||||| ||| |||||||||||||||    
T  23539080 ttcagaagctgaattctatctgcttttgactagtgacttcattaggaaaaaacgaagaaaaaactaacacaa-ttcaacctcccttcttgtgtttttctc 23539178  T
Q  104 accttca 110  Q
    |||||||    
T  23539179 accttca 23539185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 6090036 - 6089925
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| | |||||||| |||| |||| ||||| |||| ||||||||    
T  6090036 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgatgaaaaagctaacacaatt-caacctcccttcttgtgtt 6089938  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  6089937 tttctcaccttca 6089925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19885927 - 19886038
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtt 97  Q
    ||||||||||||  |||||||||||||||||||  ||||  |||||  ||||||||||| |||||||||  ||| | ||||||||||||| | |||||||    
T  19885927 tcacttcagaagtagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaagataac-acatttcaacccccctttttgtgtt 19886025  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  19886026 tttctcaccttca 19886038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 29952286 - 29952400
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaa----cccccctcttgt 94  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| |||||||||| |||| || |||||    ||||||||||||    
T  29952286 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaacccccccccctcttgt 29952384  T
Q  95 gtttttctcaccttca 110  Q
    |||||| |||||||||    
T  29952385 gtttttgtcaccttca 29952400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 30001440 - 30001554
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaa----cccccctcttgt 94  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| |||||||||| |||| || |||||    ||||||||||||    
T  30001440 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaacccccccccctcttgt 30001538  T
Q  95 gtttttctcaccttca 110  Q
    |||||| |||||||||    
T  30001539 gtttttgtcaccttca 30001554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12727085 - 12727196
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc-ccctcttgtgtt 97  Q
    ||||||||||||  ||| ||||| ||||||||| |||||  |||||  ||||||||||| || ||||||| |||| || |||||||| || |||||||||    
T  12727085 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaaaaaaaagctaacacaa-ttcaaccctccttcttgtgtt 12727183  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  12727184 tttctcaccttca 12727196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 3 - 110
Target Start/End: Complemental strand, 17667676 - 17667566
Alignment:
Q  3 acttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgttt 98  Q
    ||||||||||| ||||||||||||||| ||| |||||  |||||  ||||||||||  |||||||| | |||| || |||||||||||  |||| |||||    
T  17667676 acttcagaagcagaactctatttgcttatgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaa-ttcaaccccccgttcttttgttt 17667578  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  17667577 ttctcaccttca 17667566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 40799198 - 40799085
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacc---cccctcttgtg 95  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  ||||||||| ||||| || |||||||   ||| |||||||    
T  40799198 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaa-ttcaaccccacccttcttgtg 40799100  T
Q  96 tttttctcaccttca 110  Q
    |||||||||||||||    
T  40799099 tttttctcaccttca 40799085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 8874974 - 8875086
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc--ccctcttgtgt 96  Q
    |||||||||||||  |||| ||||||||||||| |||||  |||||  ||||| ||||| |||||||| | |||| || ||||||||  || ||||||||    
T  8874974 tcacttcagaagcaaaactttatttgcttctgatcagtgttttcagcttaggaaaaaacgaagaaaaaaccaacacaa-ttcaacccctccttcttgtgt 8875072  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  8875073 ttttctcaccttca 8875086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 14393844 - 14393956
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttca--gtaggagaaaacaaagaaaaagcaaacaaaatttcaa--cccccctcttgtgt 96  Q
    ||||||||||||  ||||||||||| ||||||| |||||  ||||   ||||||||||| |||||||||| |||| || |||||  ||||| |||||| |    
T  14393844 tcacttcagaagtagaactctattttcttctgatcagtgttttcaacttaggagaaaacgaagaaaaagctaacacaa-ttcaacgcccccttcttgtat 14393942  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  14393943 ttttctcaccttca 14393956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 20724345 - 20724298
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagta 48  Q
    ||||||||||||||||| ||||| ||||||||| ||||||||||||||    
T  20724345 tcacttcagaagctgaaatctatctgcttctgatcagtgacttcagta 20724298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 22465377 - 22465439
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    ||||||||||  |||||||||| |||| |||| ||||||||| |||||||||||||||||||||    
T  22465377 taggagaaaaggaagaaaaagctaacacaatt-caaccccccccttgtgtttttctcaccttca 22465439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 49643613 - 49643725
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaac--ccccctcttgtgt 96  Q
    |||||||| |||| ||||||||||||||| ||| |||||  |||||  ||||||||||| |||||||||| |||| || ||||||  || | ||||||||    
T  49643613 tcacttcataagcagaactctatttgcttttgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaacctccgcttcttgtgt 49643711  T
Q  97 ttttctcaccttca 110  Q
    |||||||| |||||    
T  49643712 ttttctcatcttca 49643725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 52283103 - 52282991
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  || ||||||  |||| |||| |||||||||  ||||||||    
T  52283103 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaataaaaagtcaacacaatt-caacccccccttcttgtgt 52283005  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  52283004 ttttctcaccttca 52282991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 66
Target Start/End: Complemental strand, 12221358 - 12221300
Alignment:
Q  8 agaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaa 66  Q
    |||||||||||| ||| ||||||||| || ||||||||||||| |||||| ||||||||    
T  12221358 agaagctgaactatatctgcttctgatcaatgacttcagtaggcgaaaacgaagaaaaa 12221300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 16031809 - 16031701
Alignment:
Q  3 acttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacc-cccctcttgtgtttt 99  Q
    ||||||||||  ||||||||||||||||||| |||| | |||||  ||||||||||  ||||||||| || || || ||||||| | | |||||||||||    
T  16031809 acttcagaagtggaactctatttgcttctgatcagtaatttcagcttaggagaaaaagaagaaaaagaaatcacaa-ttcaacctctcttcttgtgtttt 16031711  T
Q  100 tctcaccttc 109  Q
    ||||||||||    
T  16031710 tctcaccttc 16031701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 52919718 - 52919622
Alignment:
Q  15 gaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    ||||||||| ||||| ||| |||||  |||||  ||||||||||| |||||||| | |||| |||| || ||||| ||||||||||||||||||||||    
T  52919718 gaactctatctgcttgtgatcagtgttttcagcttaggagaaaacgaagaaaaaactaacacaatt-cagcccccttcttgtgtttttctcaccttca 52919622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 1241924 - 1242035
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||| ||||| ||||||||| |||||  |||||  ||||||||||  |||||||| | |||| |||| ||||||| || ||||||||    
T  1241924 tcacttcagaagtagaaatctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaaaccaacacaatt-caaccccacttcttgtgtt 1242022  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  1242023 tttctcaccttca 1242035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 12963935 - 12964046
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt--aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||  |||| ||||||||||||||||| | |||||  |||||   |||||||||  |||||||||| |||| |||| |||||| ||| ||||||||    
T  12963935 tcacttcgtaagcagaactctatttgcttcttatcagtgttttcagctgaggagaaaatgaagaaaaagctaacacaatt-caaccctccttcttgtgtt 12964033  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  12964034 tttctcaccttca 12964046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 49554359 - 49554470
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| || ||  |||||  ||||||||||  |||||||| | |||| |||| |||||||||| | ||||||    
T  49554359 tcacttcagaagtagaactctatctgcttctgatcaatgttttcagcttaggagaaaaagaagaaaaaaccaacacaatt-caaccccccttcgtgtgtt 49554457  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  49554458 tttctcaccttca 49554470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 2560493 - 2560383
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||| |||  ||||||||| ||||||| | |||||  ||| |  |||||||| || ||||||||| ||||| |||| |||||||||| ||||||||    
T  2560493 tcacttcaaaagtagaactctatctgcttcttatcagtgttttcggcttaggagaagacgaagaaaaagtaaacacaatt-caaccccccttcttgtgtt 2560395  T
Q  98 tttctcaccttc 109  Q
    ||||||||||||    
T  2560394 tttctcaccttc 2560383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 106
Target Start/End: Original strand, 21639134 - 21639237
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttc 101  Q
    |||||||||  ||||||||| ||||||||| | ||   |||||| |||||||||  |||||||||| |||| |||| |||||||||| ||||||||||||    
T  21639134 cttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaaaagaagaaaaagccaacacaatt-caaccccccttcttgtgtttttc 21639232  T
Q  102 tcacc 106  Q
    |||||    
T  21639233 tcacc 21639237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 2025397 - 2025292
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttc 101  Q
    |||||||||  ||||||||| ||||||||||| |    |||||| |||||||||   |||||||| ||||| |||| |||||||||| ||||||||||||    
T  2025397 cttcagaagtagaactctatctgcttctgaactgcattttcagttaggagaaaa---agaaaaagaaaacacaatt-caaccccccttcttgtgtttttc 2025302  T
Q  102 tcaccttcag 111  Q
    ||||||||||    
T  2025301 tcaccttcag 2025292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 88
Target Start/End: Complemental strand, 13939197 - 13939116
Alignment:
Q  8 agaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    |||||| ||| |||||||||||||||  ||||  |||||  |||||||||||||||||||||| |||| || |||||||||||    
T  13939197 agaagcagaaatctatttgcttctgattagtgttttcagcttaggagaaaacaaagaaaaagctaacacaa-ttcaacccccc 13939116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 14968677 - 14968561
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaa------cccccctctt 92  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  |||||||||| |||| || |||||      ||||| ||||    
T  14968677 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagccaacacaa-ttcaacccctccccccttctt 14968579  T
Q  93 gtgtttttctcaccttca 110  Q
    ||||||||||||||||||    
T  14968578 gtgtttttctcaccttca 14968561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 17239778 - 17239883
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccccc-ctcttgtgtt 97  Q
    |||||||| |||| ||||||||||||||| ||| || ||  |||||  ||||||||||| |||||||||| |||| || ||||||||||  |||| ||||    
T  17239778 tcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaacccccattcttatgtt 17239876  T
Q  98 tttctca 104  Q
    |||||||    
T  17239877 tttctca 17239883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 116
Target Start/End: Complemental strand, 38194174 - 38194117
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttcagattct 116  Q
    |||||||| ||||| |||| |||||||||  ||||||||||||||||||||||||||||    
T  38194174 agaaaaagaaaacacaatt-caacccccccttcttgtgtttttctcaccttcagattct 38194117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 11073673 - 11073624
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    ||||||||| |||| |||| |||||||| ||||||||||||||||||||||    
T  11073673 agaaaaagccaacacaatt-caacccccttcttgtgtttttctcaccttca 11073624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 41044950 - 41044900
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||| ||||| ||||  | ||||||||||||||||||||||||||||    
T  41044950 agaaaaagaaaacacaattcaaccccccctcttgtgtttttctcaccttca 41044900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 78 - 111
Target Start/End: Complemental strand, 16881476 - 16881443
Alignment:
Q  78 ttcaacccccctcttgtgtttttctcaccttcag 111  Q
    |||||||||| |||||||||||||||||||||||    
T  16881476 ttcaacccccttcttgtgtttttctcaccttcag 16881443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 112
Target Start/End: Complemental strand, 17960855 - 17960803
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcaga 112  Q
    |||||||| ||||| |||| |||||||||| |||||||||||||||||||||||    
T  17960855 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcaga 17960803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 19888135 - 19888187
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcaga 112  Q
    |||||||| ||||| |||| |||||||||| |||||||||||||||||||||||    
T  19888135 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcaga 19888187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 22804870 - 22804980
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    |||||||| |||  ||||||||| ||||||||| |||||  ||||   ||||||||||| |||||||| | |||||   ||||||| |||  ||||||||    
T  22804870 tcacttcaaaagtagaactctatctgcttctgatcagtgttttcaacttaggagaaaacgaagaaaaaactaacaa---ttcaacctccccttcttgtgt 22804966  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  22804967 ttttctcaccttca 22804980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31302657 - 31302547
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||| |||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  |||||||| | |||| |||| |||||||||| |||||| |    
T  31302657 tcactttagaagtagaactctatctgcttctgatcagtgttttcagcataggagaaaaagaagaaaaaaccaacacaatt-caaccccccttcttgtg-t 31302560  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  31302559 tttctcaccttca 31302547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 41494310 - 41494200
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||||||   ||||||||||| ||||||| |||||  |||||  |||||||||| || |||||||| |||| |||| ||||||| || ||||||||    
T  41494310 tcacttcagaaatagaactctatttacttctgatcagtgttttcagcttaggagaaaagaa-gaaaaagccaacacaatt-caaccccgcttcttgtgtt 41494213  T
Q  98 tttctcaccttca 110  Q
    || ||||||||||    
T  41494212 ttgctcaccttca 41494200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 3237941 - 3237890
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcag 111  Q
    ||||||||| |||| |||| |||||||||| ||||||||||||||||||||||    
T  3237941 agaaaaagctaacacaatt-caaccccccttcttgtgtttttctcaccttcag 3237890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 11189301 - 11189191
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    |||||||| |||  ||||||||| | ||||||| |||||  ||||   ||||||||||  |||||||| | |||| |||| |||| ||| ||||||||||    
T  11189301 tcacttcataagtagaactctatcttcttctgatcagtgttttcatcttaggagaaaaagaagaaaaaaccaacacaatt-caacacccttcttgtgttt 11189203  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  11189202 ttctcaccttca 11189191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 110
Target Start/End: Complemental strand, 14006911 - 14006879
Alignment:
Q  78 ttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||| ||||||||||||||||||||||    
T  14006911 ttcaacccccttcttgtgtttttctcaccttca 14006879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 16199932 - 16199983
Alignment:
Q  36 agtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||| |||||||||||||||| |||||||||| |||| || |||||||||||    
T  16199932 agtgatttcagtaggagaaaacgaagaaaaagccaacacaa-ttcaacccccc 16199983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 17910787 - 17910838
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcag 111  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||||||    
T  17910787 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcag 17910838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 60 - 111
Target Start/End: Complemental strand, 28165430 - 28165379
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcag 111  Q
    |||||||| ||||| |||| |||||||||| ||||||||||||||||||||||    
T  28165430 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcag 28165379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 28581355 - 28581292
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    ||||||||||  |||||||||| |||| |||| |||||||| | |||||||||||||||||||||    
T  28581355 taggagaaaaagaagaaaaagctaacacaatt-caacccccattcttgtgtttttctcaccttca 28581292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 102
Target Start/End: Complemental strand, 73835 - 73736
Alignment:
Q  3 acttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttct 102  Q
    |||||||||| |||||||||| ||||| ||| |||||| |||||||||||||||| ||||||||| ||||||||||  | ||||| ||||||||||||||    
T  73835 acttcagaagttgaactctatctgcttttgatcagtgatttcagtaggagaaaacgaagaaaaagtaaacaaaattcaatcccccttcttgtgtttttct 73736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 2e-23; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 18771990 - 18771889
Alignment:
Q  5 ttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctca 104  Q
    |||||||| |||||||||| |||||||||||||||||||||||||||||| |  |||||||||| |||| || |||||||||| || |||||||||||||    
T  18771990 ttcagaagttgaactctatgtgcttctgaacagtgacttcagtaggagaagatgaagaaaaagctaacacaa-ttcaacccccttc-tgtgtttttctca 18771893  T
Q  105 cctt 108  Q
    ||||    
T  18771892 cctt 18771889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 43644182 - 43644073
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttt 99  Q
    ||||||||||||||||||||||| ||||||||| |||||| |||||||||| ||||  || ||||||| |||| |||| |||||||||| ||| ||||||    
T  43644182 tcacttcagaagctgaactctatctgcttctgatcagtgaattcagtaggaaaaaatgaaaaaaaagctaacacaatt-caaccccccttcttatgtttt 43644084  T
Q  100 tctcaccttca 110  Q
    |||||||||||    
T  43644083 tctcaccttca 43644073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 17007611 - 17007500
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||| ||||| ||||||||||||| |||||  |||||  ||||||||||| |||||||| |||||| |||| |||||||||| ||||||||    
T  17007611 tcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaaacaaacacaatt-caaccccccttcttgtgtt 17007513  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  17007512 tttctcaccttca 17007500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19706812 - 19706726
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    |||||||||||| |||||||||| ||||||||| ||||||||||| ||||||||||| |||||||||| |||| || |||||||||||    
T  19706812 tcacttcagaagttgaactctatctgcttctgatcagtgacttcaataggagaaaacgaagaaaaagctaacacaa-ttcaacccccc 19706726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 30422280 - 30422392
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccc-cctcttgtgtt 97  Q
    ||||||||||||  ||||||||||||||||||| |||||  |||||  ||||||||||  ||||||||||||||| || ||||||||| | |||||||||    
T  30422280 tcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagcaaacacaa-ttcaacccctcttcttgtgtt 30422378  T
Q  98 tttctcaccttcag 111  Q
    ||||||||||||||    
T  30422379 tttctcaccttcag 30422392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 25163372 - 25163261
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||| ||||||| ||||||||||| |||||  |||||  ||||||||||| |||||||||| |||| |||| |||||||||| ||| ||||    
T  25163372 tcacttcagaagcagaactctgtttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caaccccccttcttatgtt 25163274  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  25163273 tttctcaccttca 25163261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19957188 - 19957299
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtga-cttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaac-ccccctcttgtgttt 98  Q
    |||||||| |||||||| | ||| ||||||||| |||||| ||||||||||||||||| |||||||||| |||| ||||  | | |||| ||||||||||    
T  19957188 tcacttcaaaagctgaaatttatctgcttctgatcagtgaacttcagtaggagaaaacgaagaaaaagctaacacaattcaatctccccttcttgtgttt 19957287  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  19957288 ttctcaccttca 19957299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 17541339 - 17541450
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||| ||||| ||||||||||||| |||||  |||||  ||||||||||  |||||||| | |||| |||| |||||||||| ||||||||    
T  17541339 tcacttcagaagcagaactatatttgcttctgatcagtgttttcagcttaggagaaaatgaagaaaaaactaacacaatt-caaccccccttcttgtgtt 17541437  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  17541438 tttctcaccttca 17541450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 45539334 - 45539445
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  ||||||||| ||||| |||| |||||||||| ||||||||    
T  45539334 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggagaaaaagaagaaaaagaaaacacaatt-caaccccccttcttgtgtt 45539432  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  45539433 tttctcaccttca 45539445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 22673074 - 22672968
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttct 102  Q
    |||||||||  ||||||||| ||||||||| | ||   |||||| |||||||||  |||||||||| |||| |||| |||||||| ||||||||||||||    
T  22673074 cttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaaaacaagaaaaagccaacacaatt-caacccccttcttgtgtttttct 22672976  T
Q  103 caccttca 110  Q
    ||||||||    
T  22672975 caccttca 22672968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15336937 - 15337015
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag-taggagaaaacaaagaaaaagcaaacaaaatt 78  Q
    ||||||||||||| ||||||||| |||| |||| |||||| ||||| ||||||||||  ||||||||||||||| ||||    
T  15336937 tcacttcagaagcagaactctatctgctcctgatcagtgatttcagttaggagaaaaagaagaaaaagcaaacacaatt 15337015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15426002 - 15426080
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag-taggagaaaacaaagaaaaagcaaacaaaatt 78  Q
    ||||||||||||| ||||||||| |||| |||| |||||| ||||| ||||||||||  ||||||||||||||| ||||    
T  15426002 tcacttcagaagcagaactctatctgctcctgatcagtgatttcagttaggagaaaaagaagaaaaagcaaacacaatt 15426080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 15517306 - 15517384
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag-taggagaaaacaaagaaaaagcaaacaaaatt 78  Q
    ||||||||||||| ||||||||| |||| |||| |||||| ||||| ||||||||||  ||||||||||||||| ||||    
T  15517306 tcacttcagaagcagaactctatctgctcctgatcagtgatttcagttaggagaaaaagaagaaaaagcaaacacaatt 15517384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 12758592 - 12758680
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    |||||| ||||||  |||||||||||||||||| |||||  |||||  ||||||||||| |||||||||| |||| || |||||||||||    
T  12758592 tcactttagaagcaaaactctatttgcttctgatcagtgttttcagtttaggagaaaacgaagaaaaagctaacacaa-ttcaacccccc 12758680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 14990941 - 14991049
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgttttt 100  Q
    |||||||||  ||||||||| ||||||||| | ||   |||||| |||||||||  |||||||||| |||| |||| |||||||||  ||||||||||||    
T  14990941 cttcagaagtagaactctatatgcttctgacctgtattttcagttaggagaaaaagaagaaaaagccaacacaatt-caaccccccgatcttgtgttttt 14991039  T
Q  101 ctcaccttca 110  Q
    ||||||||||    
T  14991040 ctcaccttca 14991049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 19153325 - 19153237
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    |||||||||||||  |||||||||||||||||| |||||  |||||  ||||||||||| ||||| |||| |||| || |||||||||||    
T  19153325 tcacttcagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaataagctaacacaa-ttcaacccccc 19153237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 111
Target Start/End: Original strand, 9767963 - 9768013
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttcag 111  Q
    |||||||| ||||| |||| |||||||| |||||||||||||||||||||||    
T  9767963 agaaaaagaaaacacaatt-caacccccttcttgtgtttttctcaccttcag 9768013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 83 - 114
Target Start/End: Original strand, 17442787 - 17442818
Alignment:
Q  83 cccccctcttgtgtttttctcaccttcagatt 114  Q
    ||||||||||||||||||||||||||||||||    
T  17442787 cccccctcttgtgtttttctcaccttcagatt 17442818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 108
Target Start/End: Original strand, 23185599 - 23185703
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttc 101  Q
    |||||||||  ||||||||| ||||||||| |||||  |||||  ||| ||||||  |||||||| | |||| |||| |||||||||| |||||||||||    
T  23185599 cttcagaagtagaactctatctgcttctgatcagtgttttcagcttagaagaaaaagaagaaaaaaccaacacaatt-caacccccct-ttgtgtttttc 23185696  T
Q  102 tcacctt 108  Q
    |||||||    
T  23185697 tcacctt 23185703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 16682103 - 16682172
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagc 68  Q
    ||||||||||||| ||||| ||||||||||||| || ||  |||||  ||||||||||| ||||||||||    
T  16682103 tcacttcagaagccgaactatatttgcttctgatcattgttttcagcttaggagaaaacgaagaaaaagc 16682172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 18121982 - 18122094
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtg-t 96  Q
    ||||||||||||  ||||||||| ||||||||| || ||  |||||   |||||||||  |||||||||| |||| || ||||||||||| ||||||| |    
T  18121982 tcacttcagaagtagaactctatctgcttctgatcaatgttttcagctaaggagaaaaagaagaaaaagccaacacaa-ttcaaccccccttcttgtgtt 18122080  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  18122081 ttttctcaccttca 18122094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20256362 - 20256400
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtg 39  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  20256362 tcacttcagaagcagaactctatttgcttctgatcagtg 20256400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 20256447 - 20256485
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtg 39  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  20256447 tcacttcagaagcagaactctatttgcttctgatcagtg 20256485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 29692613 - 29692575
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtg 39  Q
    ||||||||||||| ||||||||||||||||||| |||||    
T  29692613 tcacttcagaagcagaactctatttgcttctgatcagtg 29692575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 36104642 - 36104533
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgt-tttt 100  Q
    |||||||||  |||||| || ||||||||| | |||  |||||| |||||||||  |||||||||| |||| |||| |||||||||| ||||||| ||||    
T  36104642 cttcagaagtagaactcaatctgcttctgatctgtgttttcagttaggagaaaatgaagaaaaagccaacacaatt-caaccccccttcttgtgtttttt 36104544  T
Q  101 ctcaccttcag 111  Q
    |||||||||||    
T  36104543 ctcaccttcag 36104533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 43639004 - 43638954
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    ||||||||| |||| ||||  | ||||||||||||||||||||||||||||    
T  43639004 agaaaaagctaacacaattcaaccccccctcttgtgtttttctcaccttca 43638954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 31445403 - 31445292
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccccc-ctcttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||| |||| ||| ||||| | |||| || ||||||||||  |||||||||    
T  31445403 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagcttaggaaaaaaaaaaaaaaaaaccaacacaa-ttcaacccccattcttgtgtt 31445305  T
Q  98 tttctcaccttca 110  Q
    ||| |||||||||    
T  31445304 tttgtcaccttca 31445292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 58 - 110
Target Start/End: Complemental strand, 43773360 - 43773308
Alignment:
Q  58 aaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    ||||||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  43773360 aaagaaaaagctaacacaatt-caaccccccttcttgtgtttttctcaccttca 43773308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 1210610 - 1210661
Alignment:
Q  59 aagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  1210610 aagaaaaagctaacacaatt-caaccccccttcttgtgtttttctcaccttca 1210661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 13431528 - 13431579
Alignment:
Q  59 aagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  13431528 aagaaaaagctaacacaatt-caaccccccttcttgtgtttttctcaccttca 13431579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 110
Target Start/End: Original strand, 17287073 - 17287124
Alignment:
Q  59 aagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  17287073 aagaaaaagccaacacaatt-caaccccccttcttgtgtttttctcaccttca 17287124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 59 - 110
Target Start/End: Complemental strand, 18676898 - 18676847
Alignment:
Q  59 aagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    |||||||||| |||| |||| |||||||||| |||||||||||||||||||||    
T  18676898 aagaaaaagctaacacaatt-caaccccccttcttgtgtttttctcaccttca 18676847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1747 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1747
Description:

Target: scaffold1747; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 110
Target Start/End: Complemental strand, 602 - 517
Alignment:
Q  26 gcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttttctcaccttca 110  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||  | |||||| ||||||||||||||||||||||    
T  602 gcttctgatcagtgacttcagtaggagaaaacgaagaaaaagcaaacacaattcaatccccccttcttgtgtttttctcaccttca 517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1745 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold1745
Description:

Target: scaffold1745; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 809 - 894
Alignment:
Q  26 gcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtgtttttctcaccttca 110  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||| ||||  | |||||| ||||||||||||||||||||||    
T  809 gcttctgatcagtgacttcagtaggagaaaacgaagaaaaagcaaacacaattcaatccccccttcttgtgtttttctcaccttca 894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 54; Significance: 4e-22; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 110
Target Start/End: Complemental strand, 80664 - 80560
Alignment:
Q  6 tcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtg-tttttctca 104  Q
    ||||| |||||| ||||| ||| ||||| ||||||||||||||||||||||| |||||||||| |||| ||||| ||||||| ||||||| |||||||||    
T  80664 tcagatgctgaattctatctgcatctgatcagtgacttcagtaggagaaaacgaagaaaaagctaacacaattt-aacccccttcttgtgttttttctca 80566  T
Q  105 ccttca 110  Q
    ||||||    
T  80565 ccttca 80560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 24579 - 24689
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgttt 98  Q
    ||||||||||||  || |||||| |||||||||  ||||  |||||| |||||||||  |||||| |||||||| |||| |||||||| | ||| |||||    
T  24579 tcacttcagaagtagagctctatctgcttctgattagtgttttcagttaggagaaaaagaagaaagagcaaacataatt-caacccccattcttatgttt 24677  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  24678 ttctcaccttca 24689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1657 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold1657
Description:

Target: scaffold1657; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 1123 - 1014
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttt 99  Q
    |||||||||||| || ||||||  || ||||||  |||||||||||||||||||||| |||||||| |||||| |||| |||||||||| ||||||||||    
T  1123 tcacttcagaagttgtactctaactgattctgactagtgacttcagtaggagaaaacgaagaaaaatcaaacacaatt-caaccccccttcttgtgtttt 1025  T
Q  100 tctcaccttca 110  Q
     ||||||||||    
T  1024 gctcaccttca 1014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 50; Significance: 9e-20; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 5480 - 5372
Alignment:
Q  1 tcacttcagaagctgaactctatttgctt-ctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgttt 98  Q
    ||||||||||||||||||||||| | ||| |||| |||||| ||||||| |||| ||| |||||||||| |||| |||| |||||||||| |||||||||    
T  5480 tcacttcagaagctgaactctatcttctttctgatcagtgatttcagtatgagataacgaagaaaaagctaacacaatt-caaccccccttcttgtgttt 5382  T
Q  99 ttctcacctt 108  Q
    ||||||||||    
T  5381 ttctcacctt 5372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 4e-19; HSPs: 3)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 8 - 111
Target Start/End: Original strand, 245064 - 245167
Alignment:
Q  8 agaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaac-ccccctcttgtgtttttctcacc 106  Q
    |||||||||||||||| | ||||||| ||||||||||||||||| |||| ||| ||||||| |||| || |||||| |||| |||||| |||||||||||    
T  245064 agaagctgaactctatctacttctgatcagtgacttcagtaggaaaaaataaataaaaagctaacagaa-ttcaactccccttcttgtatttttctcacc 245162  T
Q  107 ttcag 111  Q
    |||||    
T  245163 ttcag 245167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 378354 - 378466
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccc--cctcttgtgt 96  Q
    ||||||||||||| |||||||||||||||||||  ||||  |||||  ||||||||||| |||||||||| |||| || |||||||||  | ||||||||    
T  378354 tcacttcagaagcagaactctatttgcttctgattagtgttttcagattaggagaaaacgaagaaaaagctaacacaa-ttcaaccccttcttcttgtgt 378452  T
Q  97 ttttctcaccttca 110  Q
    ||||||||| ||||    
T  378453 ttttctcactttca 378466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #3
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 110
Target Start/End: Complemental strand, 210709 - 210603
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttct 102  Q
    |||||||||  ||||||||| ||||||||| | ||   |||||| |||||||||  |||||||||| |||| |||| |||||||| ||||||||||||||    
T  210709 cttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaaaacaagaaaaagccaacacaatt-caacccccttcttgtgtttttct 210611  T
Q  103 caccttca 110  Q
    ||||||||    
T  210610 caccttca 210603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 48; Significance: 1e-18; HSPs: 3)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 29079 - 28976
Alignment:
Q  2 cacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttc 101  Q
    ||||||||||||||||||||||||| ||  |||||||||||||| ||||||     |||||||||| || || ||||| ||||||| |||||||||||||    
T  29079 cacttcagaagctgaactctatttgatttagaacagtgacttcaataggag----gaaagaaaaagaaaccacaattt-aacccccttcttgtgtttttc 28985  T
Q  102 tcaccttca 110  Q
    |||||||||    
T  28984 tcaccttca 28976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #2
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 20268 - 20376
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||| ||||||||||| ||||||| ||||   || ||  ||||||||||| |||||||| | |||| |||| |||||||| |||| |||||    
T  20268 tcacttcagaagcagaactctatttacttctgatcagtttttttagcttaggagaaaacgaagaaaaaactaacacaatt-caacccccttcttttgttt 20366  T
Q  99 ttctcacctt 108  Q
    ||||||||||    
T  20367 ttctcacctt 20376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 110
Target Start/End: Original strand, 110398 - 110509
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-----tcttgtgtt 97  Q
    |||||||||  ||||||||| ||||||||| | ||   |||||| |||||||||| |||||||| | |||| |||| |||||||||     |||||||||    
T  110398 cttcagaagtagaactctatctgcttctgatctgtattttcagttaggagaaaacgaagaaaaaaccaacacaatt-caaccccccctccttcttgtgtt 110496  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  110497 tttctcaccttca 110509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 113
Target Start/End: Complemental strand, 2277 - 2163
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||  ||||||||| ||||| |||| ||||||| || ||||||||    
T  2277 tcacttcagaagtagaactctatctgcttctgatcagtgtattcagcttaggagaaaaagaagaaaaagaaaacacaatt-caaccccacttcttgtgtt 2179  T
Q  98 tttctcaccttcagat 113  Q
    ||||||||||||||||    
T  2178 tttctcaccttcagat 2163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0567 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0567
Description:

Target: scaffold0567; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9206 - 9098
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgttt 98  Q
    ||||||||||||| | | ||||||||||||||| |||||  |||||  ||||||||||| ||||||||||  ||| || ||||||||||  |||||||||    
T  9206 tcacttcagaagcagtattctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagcttacacaa-ttcaaccccc--cttgtgttt 9110  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  9109 ttctcaccttca 9098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0210 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0210
Description:

Target: scaffold0210; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 929 - 817
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||| ||||| ||||||||| |||||  |||||  ||||||||||| |||||||||  |||| ||||  ||||||||| ||||||||    
T  929 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagttaacacaattcaaaccccccttcttgtgtt 830  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  829 tttctcaccttca 817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0163 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0163
Description:

Target: scaffold0163; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 25736 - 25630
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    ||||||||||||  ||||||||||||||||||| |||||  |||||  ||||||||||| ||||||||| ||||| || |||||||||||  |||||||     
T  25736 tcacttcagaagtagaactctatttgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagtaaacacaa-ttcaacccccccttcttgtgc 25638  T
Q  97 ttttctca 104  Q
    ||||||||    
T  25637 ttttctca 25630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 36737 - 36626
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||| | ||||| ||||||||| |||  ||||  |||||  ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||    
T  36737 tcacttcagaaacagaactttatttgcttatgattagtgttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caaccccccttcttgtgtt 36639  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  36638 tttctcaccttca 36626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 134797 - 134686
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||| | ||||| ||||||||| |||  ||||  |||||  ||||||||||| |||||||||| |||| |||| |||||||||| ||||||||    
T  134797 tcacttcagaaacagaactttatttgcttatgattagtgttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caaccccccttcttgtgtt 134699  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  134698 tttctcaccttca 134686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 7512 - 7623
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag-taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc-tcttgtg-tt 97  Q
    ||||||||||||  ||||||||| ||||||||| |||||  ||||| ||||||||||  |||||||||| |||| || ||||||||||| ||||||| ||    
T  7512 tcacttcagaagtagaactctatctgcttctgatcagtgttttcagttaggagaaaaagaagaaaaagccaacacaa-ttcaaccccccttcttgtgttt 7610  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  7611 tttctcaccttca 7623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0315 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0315
Description:

Target: scaffold0315; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 110
Target Start/End: Complemental strand, 7976 - 7866
Alignment:
Q  2 cacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgttt 98  Q
    |||||||||||  ||||||||| ||||||||| |||||  |||||  ||||||||||| |||||||||| |||| |||| ||||||| || ||| |||||    
T  7976 cacttcagaagtggaactctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caacccctcttcttatgttt 7878  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  7877 ttctcaccttca 7866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 4996 - 4887
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaa--cccccctcttgtgttt 98  Q
    ||||||||||||||||| | ||| | ||||||| |||||||||||||||||||||||  | ||||||  |||| || |||||  ||||| ||||||||||    
T  4996 tcacttcagaagctgaattatatctccttctgatcagtgacttcagtaggagaaaac-gacaaaaagttaacacaa-ttcaactcccccttcttgtgttt 4899  T
Q  99 ttctcaccttca 110  Q
    ||||||||||||    
T  4898 ttctcaccttca 4887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 2873 - 2987
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaa------cccccctcttgt 94  Q
    |||| ||||||| |||| | ||| ||||| | | ||||||||||||||||||||||| |||||||||| |||| || |||||      ||||||||||||    
T  2873 tcacctcagaagttgaattatatctgcttattatcagtgacttcagtaggagaaaacgaagaaaaagctaacacaa-ttcaacccccccccccctcttgt 2971  T
Q  95 gtttttctcaccttca 110  Q
    ||||||||||||||||    
T  2972 gtttttctcaccttca 2987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 2817 - 2905
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc 88  Q
    ||||||||||||| |||||||||||||||||||  ||||  |||||  ||||||||||| |||||||||| |||| || |||||||||||    
T  2817 tcacttcagaagcagaactctatttgcttctgataagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaacccccc 2905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 110
Target Start/End: Complemental strand, 31890 - 31786
Alignment:
Q  8 agaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctca 104  Q
    |||||| ||||| ||||||||||||| |||||  |  ||  ||||||||||| |||||||||| |||| |||| |||||||||| |||||||||||||||    
T  31890 agaagcagaactttatttgcttctgatcagtgtttcaagcttaggagaaaacgaagaaaaagctaacacaatt-caaccccccttcttgtgtttttctca 31792  T
Q  105 ccttca 110  Q
    ||||||    
T  31791 ccttca 31786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 48624 - 48512
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    |||||||| ||||  ||||||||| |||||||| |||||  | |||  ||||||||||  |||||||||| |||| |||| |||||||||  ||||||||    
T  48624 tcacttcaaaagcaaaactctattcgcttctgatcagtgtttccagcttaggagaaaatgaagaaaaagctaacacaatt-caacccccccttcttgtgt 48526  T
Q  97 ttttctcaccttca 110  Q
    ||||||| ||||||    
T  48525 ttttctctccttca 48512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0471 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0471
Description:

Target: scaffold0471; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 4 - 111
Target Start/End: Complemental strand, 2758 - 2650
Alignment:
Q  4 cttcagaagctgaactctatttgcttctgaacagtgacttcagt-aggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttc 101  Q
    |||||||||  |||||| || ||||||||| | |||  |||||| |||||||||  |||||||||| |||| |||| |||||||||| ||||||||||||    
T  2758 cttcagaagtagaactcaatctgcttctgatctgtgttttcagttaggagaaaatgaagaaaaagccaacacaatt-caaccccccttcttgtgtttttc 2660  T
Q  102 tcaccttcag 111  Q
    ||||||||||    
T  2659 tcaccttcag 2650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 7187 - 7076
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||| ||||||  |||||||||||||||||| |||||  |||||  ||||||||||  |||||||||  |||| | || |||||||||| ||||||||    
T  7187 tcacttaagaagcataactctatttgcttctgatcagtgttttcagcttaggagaaaaataagaaaaagttaacagagtt-caaccccccttcttgtgtt 7089  T
Q  98 tttctcaccttca 110  Q
    |||||||||||||    
T  7088 tttctcaccttca 7076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 110
Target Start/End: Original strand, 19457 - 19569
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgt 96  Q
    |||| |||||||  ||||||||| |||||||||  ||||  |||||  || |||||||| |||||||||| |||| |||| |||||||||  ||||||||    
T  19457 tcacgtcagaagtagaactctatctgcttctgattagtgttttcagcataagagaaaacgaagaaaaagccaacacaatt-caacccccccttcttgtgt 19555  T
Q  97 ttttctcaccttca 110  Q
    ||||||||||||||    
T  19556 ttttctcaccttca 19569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 15 - 78
Target Start/End: Original strand, 44682 - 44745
Alignment:
Q  15 gaactctatttgcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatt 78  Q
    ||||||||| ||||| ||| |||||| |||||||||||||||| |||||||||| |||| ||||    
T  44682 gaactctatctgcttttgatcagtgatttcagtaggagaaaacgaagaaaaagctaacacaatt 44745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0498 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 26 - 110
Target Start/End: Original strand, 1037 - 1126
Alignment:
Q  26 gcttctgaacagtgacttcagtaggagaaaacaaagaaaaagcaaacaaaatttcaacc---cccc---tcttgtgtttttctcaccttca 110  Q
    |||||| || |||||||||||||||||||||| |||||||||| |||| || |||||||   ||||   ||||||||||||||||||||||    
T  1037 gcttctaaatagtgacttcagtaggagaaaacgaagaaaaagctaacacaa-ttcaacctctccccgcttcttgtgtttttctcaccttca 1126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 110
Target Start/End: Original strand, 21790 - 21849
Alignment:
Q  51 agaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttca 110  Q
    ||||||| ||||||||| ||||| |||| |||||||||| |||||||||||||||||||||    
T  21790 agaaaacgaagaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttca 21849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0479 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0479
Description:

Target: scaffold0479; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 110
Target Start/End: Complemental strand, 9274 - 9158
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaaccc------ccctctt 92  Q
    ||||||||||||  ||| ||||| ||||||||| |||||  |||||  ||||||||||| |||||||||| |||| || ||||||||      || ||||    
T  9274 tcacttcagaagtagaattctatctgcttctgatcagtgttttcagcttaggagaaaacgaagaaaaagctaacacaa-ttcaaccccctaggccttctt 9176  T
Q  93 gtgtttttctcaccttca 110  Q
    ||||||||||||||||||    
T  9175 gtgtttttctcaccttca 9158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 755 - 868
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    ||||||||||||  ||| || || ||||||||| |||||  |||||  |||||||||   |||||||||  |||| |||| |||||||||| ||||||||    
T  755 tcacttcagaagtagaattccatctgcttctgatcagtgttttcagcttaggagaaatagaagaaaaagttaacacaatt-caaccccccttcttgtgtt 853  T
Q  98 tttctcaccttcaga 112  Q
    |||||||||||||||    
T  854 tttctcaccttcaga 868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 104
Target Start/End: Complemental strand, 14422 - 14317
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtt 97  Q
    |||||||| |||| ||||||||||||||| ||| || ||  |||||  ||||||||||| |||||||||| |||| |||| |||||||| | ||| ||||    
T  14422 tcacttcaaaagcagaactctatttgcttttgatcattgttttcagcttaggagaaaacgaagaaaaagctaacacaatt-caacccccattcttatgtt 14324  T
Q  98 tttctca 104  Q
    |||||||    
T  14323 tttctca 14317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 25 - 116
Target Start/End: Complemental strand, 211643 - 211549
Alignment:
Q  25 tgcttctgaacagtgacttcag--taggagaaaacaaagaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcagattct 116  Q
    ||||||||| |||||  |||||  ||||||||||| || ||||||| |||| ||||  | ||||||| ||||||||||||||||||||| |||||    
T  211643 tgcttctgatcagtgttttcagcttaggagaaaacgaataaaaagctaacacaattcaatccccccttcttgtgtttttctcaccttcaaattct 211549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1539 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1539
Description:

Target: scaffold1539; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 1608 - 1558
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||| ||||| ||||  | ||||||||||||||||||||||||||||    
T  1608 agaaaaagaaaacacaattcaaccccccctcttgtgtttttctcaccttca 1558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0738 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0738
Description:

Target: scaffold0738; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Original strand, 5623 - 5673
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||| ||||| ||||  | ||||||||||||||||||||||||||||    
T  5623 agaaaaagaaaacacaattcaaccccccctcttgtgtttttctcaccttca 5673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0525 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0525
Description:

Target: scaffold0525; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 110
Target Start/End: Complemental strand, 7103 - 7054
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||| ||||| |||| |||||||| ||||||||||||||||||||||    
T  7103 agaaaaagaaaacacaatt-caacccccttcttgtgtttttctcaccttca 7054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 47 - 110
Target Start/End: Original strand, 26500 - 26564
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttca 110  Q
    ||||||||||  |||||||||| |||| |||| |||||||||  ||||||||||||||||||||||    
T  26500 taggagaaaaagaagaaaaagctaacacaatt-caacccccccttcttgtgtttttctcaccttca 26564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 268023 - 267977
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagtgacttcagt 47  Q
    ||||||||||||||||||| |||  | ||||||||||||||||||||    
T  268023 tcacttcagaagctgaactttatcaggttctgaacagtgacttcagt 267977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 115
Target Start/End: Complemental strand, 83556 - 83489
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgtttttctcaccttcagattc 115  Q
    ||||||||||  |||||||||| |||| |||| ||||| |  |||||||||||||||||||||| ||||    
T  83556 taggagaaaaagaagaaaaagctaacacaatt-caacctcattcttgtgtttttctcaccttcacattc 83489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 14275 - 14238
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagt 38  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  14275 tcacttcagaagccgaactctatttgcttctgatcagt 14238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0267 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 112
Target Start/End: Original strand, 7178 - 7230
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccct-cttgtgtttttctcaccttcaga 112  Q
    |||||||| ||||| |||| |||||||||| |||||||||||||||||||||||    
T  7178 agaaaaagaaaacacaatt-caaccccccttcttgtgtttttctcaccttcaga 7230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0193 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0193
Description:

Target: scaffold0193; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 77 - 110
Target Start/End: Original strand, 16956 - 16989
Alignment:
Q  77 tttcaacccccctcttgtgtttttctcaccttca 110  Q
    |||||||||||||||| |||||||||||||||||    
T  16956 tttcaacccccctcttttgtttttctcaccttca 16989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 60 - 114
Target Start/End: Original strand, 37556 - 37611
Alignment:
Q  60 agaaaaagcaaacaaaatttcaacccccc--tcttgtgtttttctcaccttcagatt 114  Q
    |||||||| ||||| |||| |||||||||  ||||||||||||||||||||||||||    
T  37556 agaaaaagaaaacacaatt-caacccccccttcttgtgtttttctcaccttcagatt 37611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0065 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 1317 - 1280
Alignment:
Q  1 tcacttcagaagctgaactctatttgcttctgaacagt 38  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  1317 tcacttcagaagccgaactctatttgcttctgatcagt 1280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1149 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold1149
Description:

Target: scaffold1149; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 83 - 111
Target Start/End: Complemental strand, 2618 - 2590
Alignment:
Q  83 cccccctcttgtgtttttctcaccttcag 111  Q
    |||||||||||||||||||||||||||||    
T  2618 cccccctcttgtgtttttctcaccttcag 2590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0217 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 47 - 110
Target Start/End: Complemental strand, 18295 - 18231
Alignment:
Q  47 taggagaaaacaaagaaaaagcaaacaaaatttcaacccccctcttgtgt-ttttctcaccttca 110  Q
    ||||||||||  ||||||||| ||||| ||||  | |||||||||||||| ||||||||||||||    
T  18295 taggagaaaaagaagaaaaagaaaacacaattcaaccccccctcttgtgtcttttctcaccttca 18231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University