View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7711_low_4 (Length: 741)

Name: NF7711_low_4
Description: NF7711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7711_low_4
NF7711_low_4
[»] chr4 (56 HSPs)
chr4 (13-732)||(1215642-1216353)
chr4 (127-316)||(35788665-35788850)
chr4 (131-310)||(22231208-22231382)
chr4 (127-333)||(50543442-50543645)
chr4 (186-333)||(28245638-28245779)
chr4 (129-347)||(40717305-40717517)
chr4 (129-333)||(6218212-6218411)
chr4 (179-315)||(35819023-35819153)
chr4 (130-339)||(43742998-43743197)
chr4 (127-334)||(52559573-52559777)
chr4 (154-220)||(4464329-4464395)
chr4 (176-246)||(30530120-30530190)
chr4 (129-217)||(21498362-21498451)
chr4 (157-316)||(4645679-4645832)
chr4 (127-246)||(7926334-7926454)
chr4 (127-205)||(22845446-22845525)
chr4 (129-219)||(53828508-53828599)
chr4 (174-220)||(18528441-18528487)
chr4 (251-333)||(35796854-35796936)
chr4 (129-221)||(14783170-14783263)
chr4 (129-217)||(25052860-25052949)
chr4 (166-341)||(6666504-6666673)
chr4 (127-206)||(23209847-23209927)
chr4 (129-219)||(1518172-1518263)
chr4 (127-205)||(6218445-6218524)
chr4 (129-203)||(9685640-9685715)
chr4 (129-203)||(20821981-20822056)
chr4 (128-218)||(35609697-35609788)
chr4 (129-203)||(53814675-53814750)
chr4 (127-347)||(11036610-11036824)
chr4 (357-406)||(5398333-5398382)
chr4 (129-221)||(53814912-53815005)
chr4 (274-342)||(5398315-5398381)
chr4 (274-342)||(5398579-5398646)
chr4 (149-205)||(13555246-13555302)
chr4 (274-314)||(20726733-20726773)
chr4 (276-316)||(21646396-21646436)
chr4 (274-342)||(25323902-25323969)
chr4 (166-221)||(12869246-12869301)
chr4 (129-203)||(21498803-21498878)
chr4 (166-221)||(22445498-22445553)
chr4 (127-205)||(22863480-22863559)
chr4 (127-221)||(34358013-34358108)
chr4 (127-205)||(35788900-35788979)
chr4 (127-217)||(50543317-50543408)
chr4 (491-533)||(6218247-6218289)
chr4 (179-221)||(9685457-9685499)
chr4 (249-307)||(13495594-13495652)
chr4 (166-216)||(17111609-17111659)
chr4 (360-406)||(21646390-21646436)
chr4 (128-205)||(22827545-22827623)
chr4 (274-340)||(25324139-25324205)
chr4 (179-220)||(2516020-2516061)
chr4 (127-203)||(28245527-28245604)
chr4 (149-206)||(40726750-40726807)
chr4 (357-406)||(50543453-50543502)
[»] chr7 (53 HSPs)
chr7 (127-333)||(21861300-21861501)
chr7 (127-333)||(25620142-25620343)
chr7 (127-333)||(36277103-36277304)
chr7 (127-342)||(29469611-29469820)
chr7 (166-316)||(33834237-33834381)
chr7 (131-342)||(33996183-33996385)
chr7 (179-342)||(1596652-1596808)
chr7 (108-212)||(40898914-40899019)
chr7 (149-315)||(48661450-48661610)
chr7 (149-219)||(4506961-4507031)
chr7 (155-221)||(21821841-21821907)
chr7 (149-333)||(31892180-31892359)
chr7 (188-316)||(3519933-3520055)
chr7 (127-333)||(18826365-18826566)
chr7 (127-221)||(3038067-3038162)
chr7 (179-309)||(4886388-4886512)
chr7 (127-220)||(26239900-26239994)
chr7 (129-221)||(34027401-34027494)
chr7 (127-207)||(36276988-36277069)
chr7 (129-221)||(40746273-40746366)
chr7 (187-342)||(6001539-6001687)
chr7 (166-246)||(28080710-28080790)
chr7 (274-338)||(30727226-30727290)
chr7 (249-352)||(1936206-1936308)
chr7 (274-333)||(2315138-2315197)
chr7 (251-342)||(3519829-3519919)
chr7 (155-246)||(36993266-36993357)
chr7 (179-221)||(10882222-10882264)
chr7 (188-333)||(22574669-22574808)
chr7 (157-219)||(40121909-40121971)
chr7 (129-221)||(17202187-17202280)
chr7 (149-205)||(9688869-9688925)
chr7 (274-342)||(31485528-31485595)
chr7 (251-319)||(32292644-32292712)
chr7 (274-342)||(40746137-40746203)
chr7 (129-243)||(10903093-10903208)
chr7 (149-220)||(23796007-23796078)
chr7 (150-205)||(40746032-40746087)
chr7 (127-205)||(48243060-48243139)
chr7 (188-246)||(2404366-2404424)
chr7 (129-206)||(21054951-21055029)
chr7 (155-205)||(21822078-21822128)
chr7 (276-338)||(22339475-22339537)
chr7 (155-217)||(31257254-31257316)
chr7 (127-216)||(48243425-48243515)
chr7 (357-406)||(2315149-2315198)
chr7 (357-406)||(3519848-3519897)
chr7 (179-220)||(5871796-5871837)
chr7 (103-211)||(23796177-23796286)
chr7 (357-406)||(31892299-31892348)
chr7 (129-205)||(34027635-34027712)
chr7 (149-206)||(36993072-36993129)
chr7 (157-246)||(44874536-44874625)
[»] chr6 (34 HSPs)
chr6 (127-342)||(4868681-4868891)
chr6 (127-342)||(13353207-13353416)
chr6 (127-342)||(33796332-33796541)
chr6 (127-333)||(6542820-6543021)
chr6 (127-342)||(12330048-12330257)
chr6 (155-316)||(3680047-3680202)
chr6 (251-342)||(17147764-17147854)
chr6 (129-221)||(8026397-8026490)
chr6 (129-221)||(27653225-27653318)
chr6 (186-333)||(6400732-6400872)
chr6 (127-342)||(9705026-9705234)
chr6 (127-205)||(9705260-9705339)
chr6 (129-221)||(21690730-21690823)
chr6 (166-342)||(30256624-30256793)
chr6 (129-221)||(33494547-33494640)
chr6 (127-205)||(4868576-4868655)
chr6 (353-406)||(6542831-6542884)
chr6 (127-199)||(12329949-12330022)
chr6 (129-217)||(30256821-30256909)
chr6 (166-246)||(6054215-6054295)
chr6 (129-221)||(19712722-19712817)
chr6 (127-205)||(2736166-2736245)
chr6 (131-205)||(6054413-6054488)
chr6 (149-207)||(7915880-7915936)
chr6 (149-220)||(15082128-15082199)
chr6 (251-334)||(26192525-26192607)
chr6 (127-208)||(6400616-6400698)
chr6 (176-210)||(11085869-11085903)
chr6 (129-206)||(11721913-11721991)
chr6 (458-531)||(13740688-13740764)
chr6 (458-531)||(13746188-13746264)
chr6 (280-342)||(34345551-34345612)
chr6 (127-219)||(2736387-2736480)
chr6 (251-316)||(33631699-33631764)
[»] chr2 (35 HSPs)
chr2 (126-342)||(40379313-40379523)
chr2 (126-315)||(15124678-15124862)
chr2 (127-342)||(2029775-2029984)
chr2 (127-333)||(14466287-14466488)
chr2 (149-342)||(16419296-16419482)
chr2 (127-342)||(5711543-5711753)
chr2 (129-221)||(5509087-5509180)
chr2 (166-316)||(93248-93392)
chr2 (129-231)||(29718336-29718439)
chr2 (127-342)||(33606158-33606367)
chr2 (129-219)||(28407778-28407869)
chr2 (129-221)||(2324248-2324341)
chr2 (127-207)||(9927917-9927998)
chr2 (129-221)||(17854912-17855005)
chr2 (166-333)||(16533358-16533519)
chr2 (127-246)||(17719406-17719526)
chr2 (127-207)||(19544368-19544448)
chr2 (126-205)||(40379208-40379288)
chr2 (127-205)||(16419508-16419587)
chr2 (166-220)||(21383654-21383708)
chr2 (179-316)||(40149130-40149261)
chr2 (280-341)||(41069261-41069322)
chr2 (276-340)||(2464783-2464847)
chr2 (274-334)||(17525210-17525270)
chr2 (127-205)||(5711438-5711517)
chr2 (127-205)||(19570973-19571052)
chr2 (251-310)||(31001883-31001942)
chr2 (181-224)||(31700952-31700995)
chr2 (251-342)||(37812372-37812462)
chr2 (166-224)||(93607-93665)
chr2 (274-339)||(13250128-13250193)
chr2 (129-205)||(15124547-15124624)
chr2 (357-406)||(16419414-16419463)
chr2 (164-221)||(24395907-24395964)
chr2 (249-333)||(36352038-36352120)
[»] scaffold0519 (1 HSPs)
scaffold0519 (127-342)||(1922-2131)
[»] chr8 (62 HSPs)
chr8 (127-342)||(11232298-11232507)
chr8 (127-342)||(39052798-39053007)
chr8 (131-353)||(8084137-8084353)
chr8 (127-342)||(12688078-12688287)
chr8 (127-333)||(20301267-20301468)
chr8 (127-333)||(21087899-21088100)
chr8 (127-221)||(12317052-12317147)
chr8 (127-343)||(41790665-41790874)
chr8 (274-339)||(37867939-37868004)
chr8 (127-246)||(24532379-24532499)
chr8 (251-347)||(39052636-39052731)
chr8 (163-340)||(10615437-10615608)
chr8 (127-224)||(11232174-11232272)
chr8 (149-333)||(3157436-3157614)
chr8 (129-221)||(19256803-19256896)
chr8 (127-310)||(31197621-31197798)
chr8 (274-339)||(37868179-37868244)
chr8 (156-220)||(38476074-38476138)
chr8 (162-316)||(5675950-5676098)
chr8 (149-339)||(37868455-37868638)
chr8 (251-333)||(3157121-3157203)
chr8 (128-310)||(8466623-8466801)
chr8 (127-219)||(8716120-8716213)
chr8 (279-352)||(8849335-8849408)
chr8 (129-221)||(17469826-17469919)
chr8 (265-314)||(38475873-38475922)
chr8 (290-342)||(10615043-10615095)
chr8 (201-316)||(18004223-18004332)
chr8 (128-207)||(37001471-37001551)
chr8 (274-334)||(42049562-42049622)
chr8 (265-316)||(5675863-5675914)
chr8 (251-342)||(20094664-20094754)
chr8 (127-224)||(5932164-5932262)
chr8 (131-224)||(36917419-36917513)
chr8 (128-221)||(37001233-37001327)
chr8 (129-221)||(4828076-4828169)
chr8 (129-221)||(16050037-16050130)
chr8 (129-205)||(18939296-18939373)
chr8 (265-314)||(38475976-38476025)
chr8 (251-316)||(39960082-39960147)
chr8 (357-405)||(422342-422390)
chr8 (149-217)||(10884094-10884161)
chr8 (148-204)||(15686040-15686096)
chr8 (129-203)||(19256587-19256662)
chr8 (127-213)||(21369934-21370021)
chr8 (129-203)||(24075307-24075382)
chr8 (129-219)||(26208234-26208325)
chr8 (129-203)||(34653159-34653233)
chr8 (127-205)||(35682780-35682859)
chr8 (129-203)||(39743537-39743612)
chr8 (127-224)||(10614919-10615017)
chr8 (280-342)||(31079666-31079728)
chr8 (129-205)||(42846604-42846682)
chr8 (274-334)||(422328-422389)
chr8 (353-406)||(5675857-5675910)
chr8 (458-534)||(15042668-15042747)
chr8 (131-203)||(28069358-28069431)
chr8 (357-406)||(35682904-35682953)
chr8 (357-406)||(37867956-37868005)
chr8 (353-406)||(37868196-37868249)
chr8 (357-406)||(39052660-39052709)
chr8 (357-406)||(39052817-39052866)
[»] chr5 (53 HSPs)
chr5 (131-342)||(24346605-24346811)
chr5 (127-342)||(41666861-41667071)
chr5 (127-333)||(24531605-24531806)
chr5 (178-333)||(95378-95527)
chr5 (127-347)||(15480328-15480542)
chr5 (131-342)||(24269974-24270179)
chr5 (127-246)||(24528546-24528666)
chr5 (127-333)||(18333577-18333778)
chr5 (129-333)||(25258178-25258377)
chr5 (129-333)||(25321968-25322167)
chr5 (127-221)||(17352651-17352746)
chr5 (127-205)||(18140864-18140943)
chr5 (155-219)||(26137330-26137394)
chr5 (166-333)||(32908830-32908990)
chr5 (274-342)||(33337342-33337409)
chr5 (127-221)||(2063717-2063811)
chr5 (274-316)||(17016004-17016046)
chr5 (179-316)||(43117706-43117837)
chr5 (127-342)||(9368601-9368810)
chr5 (131-207)||(21306897-21306974)
chr5 (131-207)||(21314735-21314812)
chr5 (129-221)||(24487628-24487721)
chr5 (274-342)||(8081218-8081285)
chr5 (127-206)||(24346499-24346579)
chr5 (127-205)||(60093-60172)
chr5 (129-203)||(27132994-27133069)
chr5 (127-205)||(41666756-41666835)
chr5 (129-206)||(13296900-13296978)
chr5 (129-221)||(8098326-8098418)
chr5 (357-406)||(17015998-17016047)
chr5 (277-349)||(6919291-6919362)
chr5 (155-219)||(8081098-8081162)
chr5 (127-206)||(24269869-24269948)
chr5 (278-314)||(30494666-30494702)
chr5 (278-314)||(30535009-30535045)
chr5 (131-221)||(13296683-13296773)
chr5 (251-342)||(13700694-13700784)
chr5 (127-205)||(18333464-18333543)
chr5 (127-205)||(32908717-32908796)
chr5 (127-220)||(1564551-1564645)
chr5 (155-205)||(9187321-9187371)
chr5 (274-316)||(11682337-11682379)
chr5 (251-333)||(15590063-15590145)
chr5 (149-207)||(25258091-25258149)
chr5 (149-207)||(25321881-25321939)
chr5 (149-246)||(6413615-6413712)
chr5 (129-221)||(19522095-19522188)
chr5 (150-203)||(19522350-19522403)
chr5 (148-221)||(21209904-21209977)
chr5 (357-406)||(24269993-24270042)
chr5 (357-406)||(24346624-24346673)
chr5 (283-352)||(42490530-42490599)
chr5 (357-406)||(43117794-43117843)
[»] scaffold0692 (1 HSPs)
scaffold0692 (127-331)||(5633-5832)
[»] chr3 (35 HSPs)
chr3 (129-333)||(20327726-20327925)
chr3 (127-333)||(16239597-16239799)
chr3 (127-342)||(35038298-35038506)
chr3 (127-221)||(54368522-54368617)
chr3 (128-342)||(4155331-4155539)
chr3 (127-246)||(54567898-54568018)
chr3 (127-342)||(13574788-13574999)
chr3 (155-316)||(20303279-20303434)
chr3 (129-221)||(1723059-1723152)
chr3 (129-221)||(11589793-11589886)
chr3 (128-220)||(45138955-45139048)
chr3 (251-342)||(34992731-34992821)
chr3 (150-307)||(26272227-26272378)
chr3 (252-342)||(39683372-39683461)
chr3 (127-207)||(3975355-3975436)
chr3 (127-211)||(35038187-35038272)
chr3 (129-248)||(45828027-45828147)
chr3 (148-246)||(12930085-12930184)
chr3 (127-221)||(16926932-16927027)
chr3 (129-219)||(17638243-17638333)
chr3 (150-221)||(28087198-28087269)
chr3 (179-341)||(50052645-50052797)
chr3 (127-238)||(22729106-22729218)
chr3 (127-214)||(30179698-30179786)
chr3 (127-206)||(31317235-31317314)
chr3 (274-333)||(20303176-20303235)
chr3 (255-342)||(22775502-22775589)
chr3 (127-205)||(31317472-31317551)
chr3 (127-204)||(45828252-45828330)
chr3 (189-246)||(8142605-8142662)
chr3 (357-406)||(16239739-16239788)
chr3 (149-206)||(24866226-24866283)
chr3 (155-220)||(33640080-33640145)
chr3 (353-406)||(34992749-34992802)
chr3 (357-406)||(39683391-39683440)
[»] chr1 (51 HSPs)
chr1 (127-342)||(26176914-26177123)
chr1 (127-342)||(38668131-38668340)
chr1 (149-334)||(27413376-27413555)
chr1 (127-342)||(4112875-4113084)
chr1 (259-352)||(12376531-12376624)
chr1 (129-221)||(51589814-51589907)
chr1 (127-316)||(2859521-2859705)
chr1 (127-316)||(4098297-4098480)
chr1 (129-298)||(30369843-30370007)
chr1 (278-352)||(12325390-12325464)
chr1 (149-310)||(35772058-35772213)
chr1 (131-242)||(17452790-17452902)
chr1 (127-205)||(4112539-4112618)
chr1 (127-221)||(32783264-32783359)
chr1 (128-316)||(39348246-39348429)
chr1 (210-342)||(25713248-25713373)
chr1 (129-221)||(51589000-51589093)
chr1 (129-217)||(51589234-51589323)
chr1 (103-203)||(52907366-52907467)
chr1 (129-216)||(3169774-3169862)
chr1 (127-246)||(8870868-8870988)
chr1 (157-217)||(29265990-29266050)
chr1 (196-342)||(4112644-4112783)
chr1 (274-333)||(7307869-7307928)
chr1 (164-342)||(16162977-16163147)
chr1 (127-205)||(40079158-40079237)
chr1 (249-315)||(33132372-33132438)
chr1 (251-333)||(34264598-34264680)
chr1 (251-352)||(49142842-49142943)
chr1 (168-246)||(51460008-51460086)
chr1 (251-336)||(17208679-17208764)
chr1 (148-221)||(25255339-25255411)
chr1 (128-299)||(51460353-51460519)
chr1 (274-342)||(11524910-11524977)
chr1 (274-342)||(11525125-11525192)
chr1 (188-316)||(38733219-38733337)
chr1 (274-333)||(369780-369839)
chr1 (159-206)||(7653515-7653562)
chr1 (490-533)||(25145484-25145527)
chr1 (149-224)||(25145700-25145775)
chr1 (276-314)||(40189116-40189154)
chr1 (353-406)||(369775-369828)
chr1 (357-406)||(4098291-4098340)
chr1 (357-406)||(4112894-4112943)
chr1 (357-406)||(7307868-7307917)
chr1 (276-333)||(7653391-7653448)
chr1 (274-347)||(17412480-17412552)
chr1 (131-203)||(17452680-17452753)
chr1 (357-406)||(25713305-25713354)
chr1 (166-219)||(33156779-33156832)
chr1 (129-205)||(41035826-41035903)
[»] scaffold0092 (1 HSPs)
scaffold0092 (127-246)||(5661-5781)
[»] scaffold0041 (1 HSPs)
scaffold0041 (108-212)||(67265-67370)
[»] scaffold0129 (1 HSPs)
scaffold0129 (127-224)||(14309-14407)
[»] scaffold0048 (1 HSPs)
scaffold0048 (166-224)||(81888-81946)
[»] scaffold0005 (1 HSPs)
scaffold0005 (129-221)||(56467-56560)
[»] scaffold0481 (1 HSPs)
scaffold0481 (129-228)||(3447-3547)
[»] scaffold0766 (1 HSPs)
scaffold0766 (127-201)||(6280-6355)
[»] scaffold0400 (1 HSPs)
scaffold0400 (149-246)||(3874-3971)
[»] scaffold0365 (1 HSPs)
scaffold0365 (149-246)||(4518-4615)
[»] scaffold0084 (1 HSPs)
scaffold0084 (165-222)||(31152-31209)
[»] scaffold0181 (1 HSPs)
scaffold0181 (131-205)||(20949-21024)
[»] scaffold0045 (2 HSPs)
scaffold0045 (188-246)||(41164-41222)
scaffold0045 (166-199)||(40975-41008)


Alignment Details
Target: chr4 (Bit Score: 614; Significance: 0; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 614; E-Value: 0
Query Start/End: Original strand, 13 - 732
Target Start/End: Original strand, 1215642 - 1216353
Alignment:
Q  13 acatcaaaccaaacctatctgcccaatttaattagatggttgttcgtttgtcctccatatgtactctttatctttgttaatgagttctatatcgcataaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1215642 acatcaaaccaaacctatctgcccaatttaattagatggttgttcgtttgtcctccatatgtactctttatctttgttaatgagttccatatcgcataaa 1215741  T
Q  113 atatggtctaaatgtgtgtttataagtgagggtaatctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatc 212  Q
    |||||| ||||| |||||||||||||||||||||||||||| |  |||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||    
T  1215742 atatggcctaaacgtgtgtttataagtgagggtaatctcaccttgcaagctgattttgtggaattatgttagactcaaccatgatttctaagattgtatc 1215841  T
Q  213 agagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgtt 312  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  1215842 agagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatgtccacgaaccaagtccaatagtgtt 1215941  T
Q  313 ggtcataagggagtgtgttaaagagtcccaaatcaaacaagggtcacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgaggttgata 412  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||    
T  1215942 ggtcataagggagtgtgttaaagagtcccaaatcaaacaagggtcacccaccatttatgtccaagaaccaagctcaataatgctggtcgtgaggttgata 1216041  T
Q  413 tgttaaaacgtgtgtttatcggtggaggcaatcctcaccttaggggtgtttatatgtggagtcaatcatcacctcaatcggttttgtgaagttgtgttag 512  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  1216042 tgttaaaacgtgtgtttatcggtggagacaatcctcaccttaggggtgtttataggtggagtcaatcatcacctcaatcggttttgtgaagttgtgttag 1216141  T
Q  513 actcaaccacgacttctaagaatcccgaaaaacatctgaaagttttctcctgaaatctttaaaaacacaaaagataacgttcaacaatttgcgcatttgt 612  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1216142 actcaaccacgacttctaagaattccgaaaaacatctgaaagttttctcctgaaatctttaaaaacacaaaagataacgttcaacaatttgcgcatttgt 1216241  T
Q  613 agagagccgaaagagcacccatcttattatagacattaccattgctgaatagtatagtaacatcaaataaggcttatctagcccagtttaattaccagga 712  Q
    |||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  1216242 agagagccgaaagagcaccca-------atagacattaccattgctgaatagtatagtaacatcaaataaggcttatctagcccagtttaatta-cagga 1216333  T
Q  713 attccaactgctgatgtcca 732  Q
    |||||||||||||| |||||    
T  1216334 attccaactgctgaggtcca 1216353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 127 - 316
Target Start/End: Original strand, 35788665 - 35788850
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | ||||||||| || |||||| ||||||||||||||||||||| |||||||||||| |||||    
T  35788665 tgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcca 35788764  T
Q  225 taatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
      ||||  | ||||||||||      ||||||||||| | |||||||  ||||||||||||| ||||||||||||| ||||||||| |||||    
T  35788765 agatccgttgggccacctgc------tatcaggtttccgttatcaggccacccaccatttatgtccacgaaccaagcccaatagtgctggtc 35788850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 131 - 310
Target Start/End: Complemental strand, 22231382 - 22231208
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatc 229  Q
    |||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||||||| ||||    
T  22231382 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaaaatc 22231283  T
Q  230 cactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtg 310  Q
    || | ||||||||||      ||||||||||| | |||| ||  ||| ||||||||| ||||||||||||| |||||||||    
T  22231282 cattgggccacctgc------tatcaggtttccgctatcgggccacctaccatttatgtccacgaaccaagcccaatagtg 22231208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 50543645 - 50543442
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    ||||| |||||||| ||| |||| |||| |||||||| | |||| |||  || |||||| |||||||||||||||||||||  ||||||||||||||||     
T  50543645 tgtgtgtataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatgatatcagagcctctccaa 50543546  T
Q  226 aatccac--taggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggg 323  Q
     |||||   | | ||||||||||      ||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||||||||| | ||||    
T  50543545 gatccatatttgaccacctgcta------tcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaggg 50543452  T
Q  324 agtgtgttaa 333  Q
     |||||||||    
T  50543451 ggtgtgttaa 50543442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 186 - 333
Target Start/End: Complemental strand, 28245779 - 28245638
Alignment:
Q  186 cccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccattta 285  Q
    |||||||||||||||||| || |||||||||||||||||  ||||| | ||||||||||      ||||||||||| | |||| ||  ||||||||||||    
T  28245779 cccaaccacgatttctaatatggtatcagagcctctccaagatccattgggccacctgc------tatcaggtttccgctatcgggccacccaccattta 28245686  T
Q  286 tatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    | ||||||||||||| ||||||||| ||||| | | || |||||||||    
T  28245685 tgtccacgaaccaagcccaatagtgctggtcgtgatggggtgtgttaa 28245638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 129 - 347
Target Start/End: Complemental strand, 40717517 - 40717305
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    |||||||||||| ||| |||| |||| ||| |||  | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||||||  |    
T  40717517 tgtttataagtgggggcaatcctcacctcaaaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaata 40717418  T
Q  228 tccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtg 327  Q
    |||| | ||||||||||       |||||||||| | |||| |   ||||||||||||| ||||| ||||||| | ||||||| ||||| | |||| |||    
T  40717417 tccattgggccacctgc------catcaggtttccgctatcggaccacccaccatttatgtccacaaaccaagcctaatagtgctggtcgtgagggggtg 40717324  T
Q  328 tgttaaagagtcccaaatca 347  Q
    |||| |||||||||| ||||    
T  40717323 tgtt-aagagtcccacatca 40717305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 129 - 333
Target Start/End: Original strand, 6218212 - 6218411
Alignment:
Q  129 tgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    |||||||||||| ||| ||||| ||| |||||||  | |||| |||  || |||||||| ||||||||||||||||||| |||||||||||||||||  |    
T  6218212 tgtttataagtgggggcaatcttcacctcacaagacggttttgtggagttgtgttagacacaaccacgatttctaagatggtatcagagcctctccaaga 6218311  T
Q  228 tccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtg 327  Q
    |||| | |  ||||| |      ||||||||||| | |||||||| ||||| ||||||| | || |||||||| ||||||||| ||||| | |||| |||    
T  6218312 tccattggatcacctac------tatcaggtttccgctatcaggtcacccatcatttatgtacaagaaccaagcccaatagtgctggtcgtgagggggtg 6218405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 179 - 315
Target Start/End: Complemental strand, 35819153 - 35819023
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttaccca 278  Q
    |||||| |||||||||||||| |||||| | ||||||| ||||| |  ||||| | ||||||||||||      ||||||||| | |||| ||| |||||    
T  35819153 tgttaggcccaaccacgatttttaagatggcatcagagtctctctaagatccattgggccacctgcta------tcaggtttccgctatcgggtcaccca 35819060  T
Q  279 ccatttatatccacgaaccaagtccaatagtgttggt 315  Q
    |||||||| ||||||||||||| ||||||||| ||||    
T  35819059 ccatttatgtccacgaaccaagcccaatagtgctggt 35819023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 130 - 339
Target Start/End: Original strand, 43742998 - 43743197
Alignment:
Q  130 gtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataat 228  Q
    ||||||||||| | |||||| |||  ||||||||   |||| |||| |||||||||||| ||||||||||| |||||| ||||||||||||||| |  ||    
T  43742998 gtttataagtgggagtaatcctcaactcacaagccagttttttggggttatgttagacctaaccacgatttataagatagtatcagagcctctcaaagat 43743097  T
Q  229 ccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgt 328  Q
    ||| | | ||||||||      |||||||||     |||||||| || || ||||||| ||||||||||||  |||||| || ||||  | |||||||||    
T  43743098 ccatttgaccacctgc------tatcaggtt-----tatcaggtcactcatcatttatgtccacgaaccaaacccaataatgctggttgtgagggagtgt 43743186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 334
Target Start/End: Original strand, 52559573 - 52559777
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| |||||||||||| |||||||||||| ||| |    
T  52559573 tgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatagtatcagagcctcctcaa 52559672  T
Q  225 taatcc-actaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggg 323  Q
      ||||   | ||||||||||      ||||| |||| || |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||  | ||||    
T  52559673 agatccgtttgggccacctgc------tatcaagtttatgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggttgtgaggg 52559766  T
Q  324 agtgtgttaaa 334  Q
     ||||||||||    
T  52559767 ggtgtgttaaa 52559777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 154 - 220
Target Start/End: Original strand, 4464329 - 4464395
Alignment:
Q  154 atcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    ||||||||| |||||| |||| || |||||||||||||||||| ||||||||| |||||||||||||    
T  4464329 atcacaagccgattttgtggggttttgttagacccaaccacgaattctaagatggtatcagagcctc 4464395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 176 - 246
Target Start/End: Complemental strand, 30530190 - 30530120
Alignment:
Q  176 ttatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    ||||||||| | ||||||| ||||||||||| |||||||||||||||||  ||||| ||||||||||||||    
T  30530190 ttatgttaggctcaaccacaatttctaagatggtatcagagcctctccaagatccattaggccacctgcta 30530120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 21498362 - 21498451
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 217  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| ||||||||| |||||||||||||||||| || ||||||||||    
T  21498362 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttaggcccaaccacgatttctaatatggtatcagagc 21498451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 157 - 316
Target Start/End: Original strand, 4645679 - 4645832
Alignment:
Q  157 acaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcag 256  Q
    |||||| | |||| ||||||| |||||||| |||||| ||||| |||||| ||||||||||||||| |  ||||| | || |||||||      ||||||    
T  4645679 acaagccggttttgtgggattgtgttagactcaaccatgatttataagatagtatcagagcctctcaaagatccattgggtcacctgc------tatcag 4645772  T
Q  257 gtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    ||||| | |||| ||  |||||||| |||| |||||||| |||| |||| ||||||||||    
T  4645773 gtttccgctatcgggccacccaccaattatgtccacgaatcaagcccaaaagtgttggtc 4645832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 7926334 - 7926454
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| | || ||||| ||||||| | |||| ||||  | |||||| |||||||| |||||| ||||| |||||||||||||||||     
T  7926334 tgtgtttataagtgggggcattcctcacaacacaagccggttttgtggggctgtgttaggcccaaccaagatttcgaagatggtatcagagcctctccaa 7926433  T
Q  226 aatccactaggccacctgcta 246  Q
     ||||| | ||||||||||||    
T  7926434 gatccattgggccacctgcta 7926454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 22845525 - 22845446
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| |||||||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  22845525 tgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22845446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 53828599 - 53828508
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||||||||||| ||| |||| |||| ||| |||| |||||| |||| || |||||| ||||||||| ||||||||||| ||||||||||||    
T  53828599 tgtttataagtgggggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagagcct 53828508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 174 - 220
Target Start/End: Complemental strand, 18528487 - 18528441
Alignment:
Q  174 gattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    |||| |||||||||||||||||||||||||||| |||||||||||||    
T  18528487 gattttgttagacccaaccacgatttctaagatggtatcagagcctc 18528441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 35796936 - 35796854
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |||||||||    
T  35796936 tatcaggtttccgctatcgggccacccaccatttatctccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 35796854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 14783263 - 14783170
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    ||||||||| || ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  14783263 tgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 14783170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 25052860 - 25052949
Alignment:
Q  129 tgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 217  Q
    |||||||||||| ||||||||  ||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||    
T  25052860 tgtttataagtgggggtaatccgcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaacatggtatcagagc 25052949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 341
Target Start/End: Complemental strand, 6666673 - 6666504
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgat 265  Q
    |||| ||||||| | |||| ||||||||||||||||||||| |||| ||| ||||| ||  |||   | ||||||||||||      | ||| ||||  |    
T  6666673 ttttgtgggattgttttaggcccaaccacgatttctaagatggtattagaacctctacaagatctgttgggccacctgcta------taaggattcttct 6666580  T
Q  266 atcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccc 341  Q
    ||| ||| |||||||||||||||||| | |||||| ||||||||| | | | | |||| |||||||||||||||||    
T  6666579 atcgggtcacccaccatttatatccatgcaccaagcccaatagtgctaggcgtgagggtgtgtgttaaagagtccc 6666504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 23209847 - 23209927
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    |||||||||||||||| |||||| |||||||||||||||| ||| | || ||  ||||| ||||| |||||||||||||||    
T  23209847 tgtgtttataagtgagtgtaatcctcacatcacaagctgaatttgtagggttgagttaggcccaatcacgatttctaagat 23209927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 1518172 - 1518263
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||||||||||| ||| |||| |||  |||||||| | |||| |||| || |||||| || |||||||||||||||||| ||||||||||||    
T  1518172 tgtttataagtgggggcaatcctcagctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtatcagagcct 1518263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 6218445 - 6218524
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||||||| ||| |||||| | ||||||||||||||||||    
T  6218445 tgtgtttataagtgggggcaatcatcacctcacaagccggttttatggaattgtgttaggctcaaccacgatttctaaga 6218524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 9685640 - 9685715
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||||| ||| |||| |||| |||||||| | ||||||||| || |||||| ||||||||||||||||||    
T  9685640 tgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttaggcccaaccacgatttctaa 9685715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 20821981 - 20822056
Alignment:
Q  129 tgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||||| ||| ||| ||||| |||||||| | |||| ||||||| |||||| ||||||||||||||||||    
T  20821981 tgtttataagtgggggcaattctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 20822056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 35609788 - 35609697
Alignment:
Q  128 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcc 218  Q
    ||||||||||||| ||  |||| |||| |||||||| | |||| |||| || ||| ||||||||||| |||||||||||| |||||||||||    
T  35609788 gtgtttataagtggggccaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccatgatttctaagatggtatcagagcc 35609697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 53814750 - 53814675
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||||| || ||||| |||| |||||||| | |||| ||||||| |||||| ||||||||||||||||||    
T  53814750 tgtttataagtggggataatcctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaa 53814675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 347
Target Start/End: Complemental strand, 11036824 - 11036610
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||| |||| | |||| || |||||| || |||||| |||| |||||| ||||||||||| ||| |     
T  11036824 tgtgtttataagtgggggcaatcctcacctcacaagccgattgtgtggggttgtgttaggcctaaccacaatttttaagatggtatcagagccactctaa 11036725  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | |||||||| |      ||| ||||||| | |||||||  |||||||||| || |||| ||||||||  ||||| ||  |||| | ||||      
T  11036724 gatccattgggccacctac------tattaggtttccgctatcaggccacccaccattaatgtccatgaaccaagctcaatattgcaggtcgtgaggggt 11036631  T
Q  326 tgtgttaaagagtcccaaatca 347  Q
    |||||| |||||||||||||||    
T  11036630 tgtgtt-aagagtcccaaatca 11036610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 5398382 - 5398333
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  ||||||||||||||||||||    
T  5398382 cacccaccatttatgtccacgaaccaagcccaataatgttggtcgtgagg 5398333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 53815005 - 53814912
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||  | |||| |||| || |||||  |||||||||||||||||| || ||||||||||||||    
T  53815005 tgtttataagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcctct 53814912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 5398381 - 5398315
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||||| ||||||||||||| |||||| |||||||| | |||| ||||||| ||||||||||    
T  5398381 acccaccatttatgtccacgaaccaagcccaataatgttggtcgtgaggg-gtgtgtt-aagagtccca 5398315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 5398646 - 5398579
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||||| ||||||||||||| | ||||||| ||||| | |||| ||||||| ||||||||||    
T  5398646 acccaccatttatgtccacgaaccaagccaaatagtgctggtcgtgagggggtgtgtt-aagagtccca 5398579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 13555302 - 13555246
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    ||||| ||||| |||| |||||||||||| ||||| ||||||||| |||||||||||    
T  13555302 ctcacctcacaggctggttttatgggattgtgttaaacccaaccaggatttctaaga 13555246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 20726773 - 20726733
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttgg 314  Q
    |||||||||||||||||||| |||||| |||||||||||||    
T  20726773 acccaccatttatatccacgcaccaagcccaatagtgttgg 20726733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 21646436 - 21646396
Alignment:
Q  276 ccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    ||||||||||| |||| ||||||||||||||||||||||||    
T  21646436 ccaccatttatgtccatgaaccaagtccaatagtgttggtc 21646396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 25323969 - 25323902
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    |||||||||||||||||||| |||||| ||||| ||||||| ||| |||| | ||||||||||| ||||    
T  25323969 acccaccatttatatccacgcaccaagcccaatggtgttgggcatgaggg-gggtgttaaagagcccca 25323902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Complemental strand, 12869301 - 12869246
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||| |||| || |||||| ||||||||||||||||||||| ||||||||| ||||    
T  12869301 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctct 12869246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 21498803 - 21498878
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  21498803 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 21498878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 221
Target Start/End: Original strand, 22445498 - 22445553
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||| |||| || |||||||||||||||| | ||||||||| ||||||||||||||    
T  22445498 ttttgtggggttgtgttagacccaaccacaaattctaagatggtatcagagcctct 22445553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 22863480 - 22863559
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| ||||  ||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  22863480 tgtgtttataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 22863559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 34358108 - 34358013
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    ||||||||||| || ||| |||| |||||||| |||| | |||| |||| || |||||| | ||| |||||||||||||||  |||||||||||||    
T  34358108 tgtgtttataaatgggggcaatcctcacatcagaagccggttttgtggggttgtgttaggctcaaacacgatttctaagatgatatcagagcctct 34358013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 35788900 - 35788979
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||  |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  35788900 tgtgtttataagtgggggcaatcctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35788979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 217
Target Start/End: Complemental strand, 50543408 - 50543317
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 217  Q
    ||||| |||||||| ||| |||| ||||  ||||||| | |||| |||| || |||||| |||||||||||||||||||||  |||||||||    
T  50543408 tgtgtgtataagtgggggcaatcctcaccccacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatgttatcagagc 50543317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 491 - 533
Target Start/End: Original strand, 6218247 - 6218289
Alignment:
Q  491 cggttttgtgaagttgtgttagactcaaccacgacttctaaga 533  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||    
T  6218247 cggttttgtggagttgtgttagacacaaccacgatttctaaga 6218289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 179 - 221
Target Start/End: Original strand, 9685457 - 9685499
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||| |||||||||||||||||| || ||||||||||||||    
T  9685457 tgttaggcccaaccacgatttctaatatggtatcagagcctct 9685499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 249 - 307
Target Start/End: Complemental strand, 13495652 - 13495594
Alignment:
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaata 307  Q
    ||||||||||||| | |||||||| | ||||||||||| |||||||| |||| ||||||    
T  13495652 gttatcaggtttcggctatcaggtcagccaccatttatgtccacgaatcaagcccaata 13495594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 216
Target Start/End: Original strand, 17111609 - 17111659
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagag 216  Q
    |||| |||| || |||||| ||||||||||||||||||||| |||||||||    
T  17111609 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagag 17111659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 360 - 406
Target Start/End: Complemental strand, 21646436 - 21646390
Alignment:
Q  360 ccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    |||||| ||||||||| ||||||||| ||||| ||||||||||||||    
T  21646436 ccaccatttatgtccatgaaccaagtccaatagtgttggtcgtgagg 21646390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 128 - 205
Target Start/End: Original strand, 22827545 - 22827623
Alignment:
Q  128 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    ||||||||||||| ||| |||| |||| |||||||| | |||| | || || |||||| ||||||||||||||||||||    
T  22827545 gtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttaggcccaaccacgatttctaaga 22827623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 274 - 340
Target Start/End: Complemental strand, 25324205 - 25324139
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcc 340  Q
    |||||||||||||||| ||| |||||| |||||||| ||||   | |||| ||||||||||||||||    
T  25324205 acccaccatttatatctacgcaccaagcccaatagtattgggtgtgagggggtgtgttaaagagtcc 25324139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Original strand, 2516020 - 2516061
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    |||||| ||||||||||||| ||||||| |||||||||||||    
T  2516020 tgttaggcccaaccacgattactaagatcgtatcagagcctc 2516061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 203
Target Start/End: Complemental strand, 28245604 - 28245527
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||| |||||||||||    
T  28245604 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaactacgatttctaa 28245527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 40726750 - 40726807
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    ||||| |||||||| | |||| | ||||| |||||| |||||||||||||||||||||    
T  40726750 ctcacctcacaagccggttttgtaggattgtgttaggcccaaccacgatttctaagat 40726807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 50543502 - 50543453
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  ||||| ||||||||||||||    
T  50543502 cacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagg 50543453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 6e-33; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 21861300 - 21861501
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||||||| |||| |||| | |||||| | |||| ||||||| |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  21861300 tgtgtttataagtgagggcaatcctcaccttacaagccggttttgtgggattgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 21861399  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||      ||||||||||||| | |||| ||  ||||||||||||| ||||||||||||| | ||||||| ||||| | |||| |    
T  21861400 gatccattgggccacct------gttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcctaatagtgctggtcgtgaggggg 21861493  T
Q  326 tgtgttaa 333  Q
    ||||||||    
T  21861494 tgtgttaa 21861501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 25620142 - 25620343
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||||||     
T  25620142 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaa 25620241  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      ||||||||||| | |||  ||  ||||||||||||| ||||||||||||| ||||||||||||||| | | || |    
T  25620242 gatccattgggccacctgc------tatcaggtttccgctattgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaaggtg 25620335  T
Q  326 tgtgttaa 333  Q
    ||||||||    
T  25620336 tgtgttaa 25620343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 36277304 - 36277103
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||  |||||| |||| || |||||| |||||||||||||||||||||  ||||||||||||||||     
T  36277304 tgtgtttataagtgggggcaatcctcacctcacaagtcgattttgtggggttgtgttagtcccaaccacgatttctaagatgttatcagagcctctccaa 36277205  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | |||||||| |      ||||||||||| | |||| |   ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |    
T  36277204 gatccattgggccacctac------tatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 36277111  T
Q  326 tgtgttaa 333  Q
    ||||||||    
T  36277110 tgtgttaa 36277103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 29469611 - 29469820
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| |||||||||||||||||| || |||||||||||||||||     
T  29469611 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctctccaa 29469710  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||      ||||||||| ||| | |||| ||  ||||||||||||| |||||||| |||| ||||||||| ||||| | |||| |    
T  29469711 gatccattgggccacct------gttatcaggcttccgctatcgggccacccaccatttatgtccacgaatcaagcccaatagtgctggtcgtgaggggg 29469804  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  29469805 tgtgtt-aagagtccca 29469820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 166 - 316
Target Start/End: Original strand, 33834237 - 33834381
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgat 265  Q
    |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||  ||||| | ||||||||||      ||||||||||    |    
T  33834237 ttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaagatccattgggccacctgc------tatcaggttttccct 33834330  T
Q  266 atcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    ||| ||  ||||||||||||| ||||||||||||| |||||||||||||||    
T  33834331 atcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggtc 33834381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 131 - 342
Target Start/End: Complemental strand, 33996385 - 33996183
Alignment:
Q  131 tttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatc 229  Q
    |||||||||| ||| ||||| ||| |||||||  | |||| |||  || |||||| ||||||||||||||||||||| ||||||||||||||||   |||    
T  33996385 tttataagtgggggcaatcttcacctcacaagtcggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcctctcc---atc 33996289  T
Q  230 cactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtg 329  Q
    || | ||||||||||      ||||||||||| |  ||| ||  ||||||||||||| ||||||||||||| |||||||||||| || | |||| ||| |    
T  33996288 cattgggccacctgc------tatcaggtttccgcaatcgggccacccaccatttatgtccacgaaccaagcccaatagtgttgatcgtgagggtgtgag 33996195  T
Q  330 ttaaagagtccca 342  Q
    || ||||||||||    
T  33996194 tt-aagagtccca 33996183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 179 - 342
Target Start/End: Original strand, 1596652 - 1596808
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttaccca 278  Q
    |||||| || |||||| ||||||||||| |||||||||||||||||  ||||| | |||||| ||      |||||||||||| | |||| ||  |||||    
T  1596652 tgttaggcctaaccacaatttctaagatggtatcagagcctctccaagatccattgggccacatg------ttatcaggtttccgctatcgggccaccca 1596745  T
Q  279 ccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    |||||||| ||||||||||||| ||||||||| ||||| | || | ||||||| ||||||||||    
T  1596746 ccatttatgtccacgaaccaagcccaatagtgctggtcgtgagagtgtgtgtt-aagagtccca 1596808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 108 - 212
Target Start/End: Complemental strand, 40899019 - 40898914
Alignment:
Q  108 ataaaatatggtctaaatgtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    |||||||||| ||| ||  |||||||||||||| ||| |||| |||| |||||||||| |||||||||||| |||||| | ||| ||||| |||||||||    
T  40899019 ataaaatatgatctgaacatgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaagat 40898920  T
Q  207 tgtatc 212  Q
    ||||||    
T  40898919 tgtatc 40898914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 149 - 315
Target Start/End: Complemental strand, 48661610 - 48661450
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctacc 248  Q
    ||||| |||||||| | |||| || |||| ||||||||||||||||||||||||| ||  |||||||||||||  |  | ||| |  |||||||||        
T  48661610 ctcacctcacaagccggttttgtgagattgtgttagacccaaccacgatttctaatatgatatcagagcctctttaagaaccattgagccacctgc---- 48661515  T
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggt 315  Q
      ||||||||||| | | || ||  ||||||||||||| ||||||||||||| ||||||||||||||    
T  48661514 --tatcaggtttccgctttcgggccacccaccatttatgtccacgaaccaagcccaatagtgttggt 48661450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 219
Target Start/End: Original strand, 4506961 - 4507031
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    ||||| |||||||  | ||||||||| || ||||||||||||| |||||||||||||||||||||||||||    
T  4506961 ctcacctcacaagtcggttttatggggttgtgttagacccaactacgatttctaagattgtatcagagcct 4507031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 155 - 221
Target Start/End: Original strand, 21821841 - 21821907
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||| | |||||| ||||||| |||||| ||||||||||||||||||||| ||||||||||||||    
T  21821841 tcacaaaccgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctct 21821907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 333
Target Start/End: Original strand, 31892180 - 31892359
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaa-ccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctac 247  Q
    ||||| |||||||| | |||| |||  ||||||||| ||||| || |||| |||||||| | |||||||||||||||  | | | | ||||||||||||     
T  31892180 ctcacctcacaagccggttttgtggagttatgttaggcccaaaccccgatctctaagatggaatcagagcctctccaagacctattgggccacctgcta- 31892278  T
Q  248 cgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
         ||||||||| | |||||||  ||||||||||||| ||||||||||||| |||||| || ||||| | |||| |||||||||    
T  31892279 -----tcaggtttccgttatcaggccacccaccatttatgtccacgaaccaagcccaataatgatggtcgtgagggggtgtgttaa 31892359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 316
Target Start/End: Complemental strand, 3520055 - 3519933
Alignment:
Q  188 caaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttata 287  Q
    |||||||||||||| || | |||||||||||||||||| ||||| | ||||||||||      |||| |||||  | |||| ||  |||||||||||||     
T  3520055 caaccacgatttcttagttggtatcagagcctctccatgatccattgggccacctgc------tatctggttttcgctatcgggacacccaccatttatg 3519962  T
Q  288 tccacgaaccaagtccaatagtgttggtc 316  Q
    ||||||||||||| ||||||||| |||||    
T  3519961 tccacgaaccaagcccaatagtgctggtc 3519933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 18826566 - 18826365
Alignment:
Q  127 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||||||| ||||  ||||||||||||||| |||| || ||||||   ||||||  |||||||||||  ||||||||||||| ||     
T  18826566 tgtgtttataagtgggggtaattctcaactcacaagctgattttgtggggttgtgttaggttcaaccataatttctaagatgatatcagagcctcttcaa 18826467  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     |||||||  |||| ||||      |||||  |||| | ||||  |  |||||||||||||  |||||||||||| ||||| ||||||||||| ||||      
T  18826466 gatccactgagccatctgc------tatcaaatttccgctatcgagccacccaccatttatgaccacgaaccaagcccaattgtgttggtcatgagggga 18826373  T
Q  326 tgtgttaa 333  Q
    ||||||||    
T  18826372 tgtgttaa 18826365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 3038162 - 3038067
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| ||||||||||||  |||||||||||||    
T  3038162 tgtgtttataagtgggggcaatcctcacgtcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagataatatcagagcctct 3038067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 179 - 309
Target Start/End: Original strand, 4886388 - 4886512
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttaccca 278  Q
    |||||| ||||||||||||||||||||| ||||||| | |||||||  ||||| | ||||||||||      ||||| ||||||  ||||  |  |||||    
T  4886388 tgttaggcccaaccacgatttctaagatggtatcagggtctctccaagatccattgggccacctgc------tatcaagtttctactatcgagccaccca 4886481  T
Q  279 ccatttatatccacgaaccaagtccaatagt 309  Q
    |||||||| ||||||||||||| ||||||||    
T  4886482 ccatttatgtccacgaaccaagcccaatagt 4886512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 26239994 - 26239900
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    |||||||||||||| ||| |||| |||| |||||||  | | || |||| || |||||||||||||||| ||||||||||| |||||||||||||    
T  26239994 tgtgtttataagtgggggcaatcctcacctcacaagtcggtattgtggggttgtgttagacccaaccacaatttctaagatggtatcagagcctc 26239900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 34027401 - 34027494
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || |||| |||||||||    
T  34027401 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtattagagcctct 34027494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 36277069 - 36276988
Alignment:
Q  127 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    |||||||||||||| ||  ||| ||||| |||||||| | |||||||||||| |||||| || |||||||||||||||||||    
T  36277069 tgtgtttataagtggggacaattctcacctcacaagcaggttttatgggattgtgttaggcctaaccacgatttctaagatt 36276988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 40746273 - 40746366
Alignment:
Q  129 tgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||||| ||| ||||| ||| |||| |||||| |||| || |||||| ||||||||| |||||||| || |||| |||||||||    
T  40746273 tgtttataagtgagggcaatcctcacctcataagccgattttgtggggttgtgttaggcccaaccacaatttctaatatggtattagagcctct 40746366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 342
Target Start/End: Complemental strand, 6001687 - 6001539
Alignment:
Q  187 ccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttat 286  Q
    |||||||||||||||||||| |||||||||||||| || |||  | |||| || ||||||      |||||||||   ||||  ||  ||||||||||||    
T  6001687 ccaaccacgatttctaagatggtatcagagcctcttcaaaatttattaggtcatctgcta------tcaggtttcccctatcgagtctcccaccatttat 6001594  T
Q  287 atccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
     ||||||||||||| | |||| || ||||| | |||||||||||| ||||||||||    
T  6001593 ttccacgaaccaagcctaataatgctggtcgtgagggagtgtgtt-aagagtccca 6001539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 28080710 - 28080790
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    |||| |||| |||||||||| ||||||||||||||||||||  ||||||||||||| ||  ||| | | ||||||||||||    
T  28080710 ttttgtggggttatgttagatccaaccacgatttctaagatgatatcagagcctcttcaagatctattgggccacctgcta 28080790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 338
Target Start/End: Complemental strand, 30727290 - 30727226
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagt 338  Q
    ||||||||||||||||||| ||| ||| ||||||||||||| | | |||| ||||||||||||||    
T  30727290 acccaccatttatatccacaaactaagcccaatagtgttgggcgtgagggggtgtgttaaagagt 30727226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 249 - 352
Target Start/End: Complemental strand, 1936308 - 1936206
Alignment:
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcccaaatcaa 348  Q
    ||||||||||||| | ||||||   ||| ||||||||| || |||||||| | ||||||||||||||||| | |  ||||||||||||||| || |||||    
T  1936308 gttatcaggtttccgctatcagcc-acctaccatttatgtcaacgaaccatgcccaatagtgttggtcatgaagaggtgtgttaaagagtcacacatcaa 1936210  T
Q  349 acaa 352  Q
    ||||    
T  1936209 acaa 1936206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 2315197 - 2315138
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| | |||| |||| ||||    
T  2315197 acccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtattaa 2315138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 3519919 - 3519829
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||| | |||| ||  ||||||||||||| ||||||||||||| |||||| || ||||| | |||| ||||||| ||||||||||    
T  3519919 tatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtgtt-aagagtccca 3519829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 155 - 246
Target Start/End: Complemental strand, 36993357 - 36993266
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    |||||||  |||||| ||| ||| ||||||| ||||||| |||||||||||| |||||||||||||| ||  ||||| | |||||| |||||    
T  36993357 tcacaaggcgattttgtggaattgtgttagatccaaccatgatttctaagatggtatcagagcctcttcaagatccattgggccacgtgcta 36993266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 221
Target Start/End: Complemental strand, 10882264 - 10882222
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||| ||||||||||||||||||||| ||||||||||||||    
T  10882264 tgttaggcccaaccacgatttctaagatggtatcagagcctct 10882222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 188 - 333
Target Start/End: Original strand, 22574669 - 22574808
Alignment:
Q  188 caaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttata 287  Q
    ||||||| ||||||| ||| |||| |||| |||||||  ||||| | ||||||||||||      ||||||||| | |||| |   |||||||||||||     
T  22574669 caaccacaatttctatgatggtataagagtctctccaagatccattgggccacctgcta------tcaggtttcagctatcggaccacccaccatttatg 22574762  T
Q  288 tccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    || |||||||||| ||||||||||||||| | |||  |||||||||    
T  22574763 tctacgaaccaagcccaatagtgttggtcgtgaggtggtgtgttaa 22574808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 157 - 219
Target Start/End: Complemental strand, 40121971 - 40121909
Alignment:
Q  157 acaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||    
T  40121971 acaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcct 40121909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 17202187 - 17202280
Alignment:
Q  129 tgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| ||| ||||  |||||||| | |||| |||| || |||||| |||||||||||||| ||| || ||||||||||||||    
T  17202187 tgtttataagtgggggcaattctcatctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagcctct 17202280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 205
Target Start/End: Complemental strand, 9688925 - 9688869
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    ||||| ||||| |||| |||||||||||| ||||| ||||||||| |||||||||||    
T  9688925 ctcacctcacaggctggttttatgggattgtgttaaacccaaccaggatttctaaga 9688869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 31485595 - 31485528
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    |||||||||||||||||||||| |||  |||||||||||| || | |||| ||||||| ||||||||||    
T  31485595 acccaccatttatatccacgaatcaaacccaatagtgttgttcgtgagggggtgtgtt-aagagtccca 31485528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 251 - 319
Target Start/End: Original strand, 32292644 - 32292712
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcata 319  Q
    ||||||||||  | |||| ||| ||||||||| |||||||||| |||||| ||||||||||||| ||||    
T  32292644 tatcaggttttcgctatcgggtcacccaccatatatatccacgcaccaagcccaatagtgttgggcata 32292712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 40746203 - 40746137
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| ||||||| ||||||||||    
T  40746203 acccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggg-gtgtgtt-aagagtccca 40746137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 243
Target Start/End: Original strand, 10903093 - 10903208
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    |||||||||||  |||||||| |||| |||||||| | |||| |||  || |||||| ||||||||||||| |||| ||  ||||||||| ||||||  |    
T  10903093 tgtttataagtaggggtaatcctcacctcacaagccggttttgtggagttgtgttagccccaaccacgattactaaaatgatatcagagcttctccaaga 10903192  T
Q  228 tccactaggccacctg 243  Q
    |||| | |||||||||    
T  10903193 tccattgggccacctg 10903208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 23796078 - 23796007
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    ||||| |||||||| |||||||||||  | |||||| | |||||| ||||| |||||| |||||||||||||    
T  23796078 ctcacctcacaagccgattttatggggatgtgttaggctcaaccatgatttttaagatggtatcagagcctc 23796007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 205
Target Start/End: Complemental strand, 40746087 - 40746032
Alignment:
Q  150 tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||| |||||| | |||||| ||||||| |||||||||||||||| ||||||||||    
T  40746087 tcacctcacaaaccgattttgtgggattgtgttagacccaaccacaatttctaaga 40746032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 48243139 - 48243060
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||| |||||    
T  48243139 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttgtaaga 48243060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 2404424 - 2404366
Alignment:
Q  188 caaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    ||||||||||||||||||| |||||||||||||| |  |||||| | || |||||||||    
T  2404424 caaccacgatttctaagatggtatcagagcctcttcgaaatccattgggtcacctgcta 2404366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 21055029 - 21054951
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||| |||||||||||    
T  21055029 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagat 21054951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 21822078 - 21822128
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||| |||||| |||| || |||||||||||||||| ||||||||||    
T  21822078 tcacaagcagattttgtgggtttgtgttagacccaaccacaatttctaaga 21822128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 338
Target Start/End: Complemental strand, 22339537 - 22339475
Alignment:
Q  276 ccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagt 338  Q
    |||||||| || ||||||||| ||| |||||||||||| || | | |||||||||||||||||    
T  22339537 ccaccattaatgtccacgaacaaagcccaatagtgttgatcgtgaaggagtgtgttaaagagt 22339475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 31257316 - 31257254
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 217  Q
    |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||    
T  31257316 tcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 31257254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 216
Target Start/End: Complemental strand, 48243515 - 48243425
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagag 216  Q
    |||||||||||||| ||| |||| |||  | |||||| | |||| |||| || ||||||||||||||| ||||| |||||| |||||||||    
T  48243515 tgtgtttataagtgggggcaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccatgatttttaagatggtatcagag 48243425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 2315198 - 2315149
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  ||||| ||||||||||||||    
T  2315198 cacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagg 2315149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 3519897 - 3519848
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  |||||||| |||||||||||    
T  3519897 cacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagg 3519848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 179 - 220
Target Start/End: Complemental strand, 5871837 - 5871796
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    |||||| |||||||||||||||||||||  ||||||||||||    
T  5871837 tgttagtcccaaccacgatttctaagatgatatcagagcctc 5871796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 211
Target Start/End: Complemental strand, 23796286 - 23796177
Alignment:
Q  103 atcgcataaaatatggtctaaatgtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttct 201  Q
    |||| |||||| |||||||||   |||||||||||||| ||| |||| |||| ||||||  ||||||| |||| || |||||| | |||||| ||||| |    
T  23796286 atcggataaaagatggtctaacaatgtgtttataagtgggggcaatcatcacctcacaaattgattttgtggggttgtgttaggctcaaccatgattttt 23796187  T
Q  202 aagattgtat 211  Q
    ||||| ||||    
T  23796186 aagatggtat 23796177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 31892299 - 31892348
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  |||||||| |||||||||||    
T  31892299 cacccaccatttatgtccacgaaccaagcccaataatgatggtcgtgagg 31892348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 34027635 - 34027712
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||| ||||||||||||||    
T  34027635 tgtttataagtgggggcaatcctcacttcacaagccggttttgtggggttgtgttaggcccaatcacgatttctaaga 34027712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Complemental strand, 36993129 - 36993072
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    ||||| |||||||||| |||| |||| || |||||| |||||||| ||||||||||||    
T  36993129 ctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaagat 36993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 246
Target Start/End: Complemental strand, 44874625 - 44874536
Alignment:
Q  157 acaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    |||||| ||||||||||| || |||||| || |||||| || |||||||| ||||||||| |||| ||  ||||| | || |||||||||    
T  44874625 acaagccgattttatgggcttgtgttaggccaaaccacaatgtctaagatggtatcagagtctcttcaagatccattgggtcacctgcta 44874536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 9e-32; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 4868891 - 4868681
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||| |||||    
T  4868891 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcca 4868792  T
Q  225 taatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggga 324  Q
      |||| || ||||||||||      ||||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | ||||     
T  4868791 agatccgctgggccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggg 4868698  T
Q  325 gtgtgttaaagagtccca 342  Q
    ||||||| ||||||||||    
T  4868697 gtgtgtt-aagagtccca 4868681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 13353207 - 13353416
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  13353207 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 13353306  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||      ||||||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |    
T  13353307 gatccattgggccacct------gttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 13353400  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  13353401 tgtgtt-aagagtccca 13353416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 33796332 - 33796541
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  33796332 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 33796431  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||      ||||||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |    
T  33796432 gatccattgggccacct------gttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 33796525  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  33796526 tgtgtt-aagagtccca 33796541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 6543021 - 6542820
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| ||| |||| | |||| |||| || |||||||||||||||||||||| ||||| |||||||||||||| ||     
T  6543021 tgtgtttataagtgggggcaatcatcacctcagaagccggttttgtggggttgtgttagacccaaccacgatttcaaagatggtatcagagcctcttcaa 6542922  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | || ||| |||      ||||||||||| | |||| ||| ||||||||||||| ||||||||||||||||||||  ||||||| | |||| |    
T  6542921 gatccattgggtcacttgc------tatcaggtttccgttatcgggtcacccaccatttatgtccacgaaccaagtccaatatcgttggtcgtgagggtg 6542828  T
Q  326 tgtgttaa 333  Q
    ||||||||    
T  6542827 tgtgttaa 6542820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 12330257 - 12330048
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| || | |||| |||||||| | |||| || | || |||||| |||||||||||||||||| || |||||||||||||||||     
T  12330257 tgtgtttataagtgggggcaaccctcacctcacaagccggttttgtgaggttgtgttaggcccaaccacgatttctaatatggtatcagagcctctccaa 12330158  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      ||||||||||| |  ||| ||  ||||||||||||| ||||||||||||| |||||  || ||||| | |||| |    
T  12330157 gatccattgggccacctgc------tatcaggtttccgccatcgggccacccaccatttatgtccacgaaccaagcccaattatgctggtcgtgaggggg 12330064  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  12330063 tgtgtt-aagagtccca 12330048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 155 - 316
Target Start/End: Original strand, 3680047 - 3680202
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatc 254  Q
    |||||||  |||||| |||| || |||||| ||||||||| ||||||||||| |||||||| |||||||| ||||||   || |||||||      |||     
T  3680047 tcacaagtcgattttgtggggttgtgttaggcccaaccacaatttctaagatggtatcagaccctctccaaaatccatcgggtcacctgc------tatt 3680140  T
Q  255 aggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    ||||||| | |||| ||| | ||||||||||| ||||| ||||||| |||||||||||||||    
T  3680141 aggtttccgctatcgggtcatccaccatttatgtccacaaaccaagcccaatagtgttggtc 3680202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 17147854 - 17147764
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||| | |||||||| ||||||||||||| ||||||||||||| ||||||||| ||||  | |||| ||||||| ||||||||||    
T  17147854 tatcaggtttccgctatcaggtcacccaccatttatgtccacgaaccaagcccaatagtgctggttgtgagggggtgtgtt-aagagtccca 17147764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 8026397 - 8026490
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  8026397 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 8026490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 27653225 - 27653318
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||  | |||| ||||||| |||||| |||||||||||||||||| || ||||||||||||||    
T  27653225 tgtttataagtgggggaaatcctcacctcacaagtcggttttgtgggattgtgttaggcccaaccacgatttctaatatggtatcagagcctct 27653318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 186 - 333
Target Start/End: Complemental strand, 6400872 - 6400732
Alignment:
Q  186 cccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccattta 285  Q
    |||||||||||||| |||||| |||||| |||||||||| |||| | | || |||||||||      ||||||||||| |||| |   ||||||||||||    
T  6400872 cccaaccacgatttttaagatggtatcaaagcctctccaaaatcta-tgggtcacctgcta------tcaggtttctgctatcggaccacccaccattta 6400780  T
Q  286 tatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    | ||||||||||||| ||||||||| ||||| | |||| | |||||||    
T  6400779 tgtccacgaaccaagcccaatagtgctggtcgtgagggggggtgttaa 6400732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 9705026 - 9705234
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 224  Q
    |||||||||||||| ||| |||| |||| |||||||  | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||| |||||    
T  9705026 tgtgtttataagtgggggcaatcatcacctcacaagtcggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctcctcca 9705125  T
Q  225 taatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggga 324  Q
      ||    | ||||||||||      |||||||||||   |||| ||  ||||||||||||| ||||  ||||||||||||||||| ||||| | ||||     
T  9705126 agatttgttgggccacctgc------tatcaggtttccattatcgggccacccaccatttatgtcca--aaccaagtccaatagtgctggtcgtgagggg 9705217  T
Q  325 gtgtgttaaagagtccca 342  Q
    ||||||| ||||||||||    
T  9705218 gtgtgtt-aagagtccca 9705234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 9705260 - 9705339
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||||||||||||||||||||||||    
T  9705260 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttctaaga 9705339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 21690730 - 21690823
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| |||||| |||| || |||||| | |||||||||||||||| || |||||| |||||||    
T  21690730 tgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggctcaaccacgatttctaatatggtatcaaagcctct 21690823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 166 - 342
Target Start/End: Original strand, 30256624 - 30256793
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgat 265  Q
    |||| |||| || |||||| ||||||||||||||||||| | |||||||||||| |||| |||||| | |||| | |||      ||||||||||  |||    
T  30256624 ttttgtggggttgtgttaggcccaaccacgatttctaaggtggtatcagagcctttccaaaatccattgggccgcatgc------tatcaggttttcgat 30256717  T
Q  266 atcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    |||  |  |||| |||||||| ||||||||| ||| |||| |||||||||| | | || ||||||| ||||||||||    
T  30256718 atcgagccaccc-ccatttatgtccacgaactaagcccaacagtgttggtcgtgatggggtgtgtttaagagtccca 30256793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 33494547 - 33494640
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||| |||||    
T  33494547 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagaacctct 33494640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 4868655 - 4868576
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  4868655 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 4868576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 6542884 - 6542831
Alignment:
Q  353 gggtcacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||||||| ||||||||| ||||||||| |||||  |||||||||||||    
T  6542884 gggtcacccaccatttatgtccacgaaccaagtccaatatcgttggtcgtgagg 6542831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 127 - 199
Target Start/End: Complemental strand, 12330022 - 12329949
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgattt 199  Q
    |||||||||||||| ||| |||| |||| ||||||||||||||| || | || |||||| ||||||||||||||    
T  12330022 tgtgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaaccacgattt 12329949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 30256821 - 30256909
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 217  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||    
T  30256821 tgtttataagtg-gggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagc 30256909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 166 - 246
Target Start/End: Original strand, 6054215 - 6054295
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    |||| ||||||  |||||||| |||||||||||||||||||  ||||||| ||||| ||  || || ||||||||||||||    
T  6054215 ttttgtgggatcgtgttagactcaaccacgatttctaagatgatatcagaacctcttcaagattcattaggccacctgcta 6054295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 19712722 - 19712817
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgt--tagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||  ||| ||||||||| ||||||||||| ||||||||||||||    
T  19712722 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtgttaggcccaaccaccatttctaagatggtatcagagcctct 19712817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 2736245 - 2736166
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||  |||| |||| ||| || | |||||| | ||||| |||||||||||||||||||||||||||    
T  2736245 tgtgtttataagtggggacaatcctcacctcataaacagattttgtaggattgtgttagacccaaccacgatttctaaga 2736166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 6054413 - 6054488
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||| ||| |||| |||| |||||| | |||||| | || || |||||||||||||||||||||||||||    
T  6054413 tttataagtgggggcaatcctcacctcacaaaccgattttgtagggttgtgttagacccaaccacgatttctaaga 6054488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 207
Target Start/End: Original strand, 7915880 - 7915936
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    ||||| |||||||| |||||| |||| ||  ||||||||||||||||||||||||||||    
T  7915880 ctcacctcacaagccgattttgtggggtt--gttagacccaaccacgatttctaagatt 7915936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 220
Target Start/End: Complemental strand, 15082199 - 15082128
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    ||||| |||||||| | |||| ||||||| |||||| ||||| |||||||||||| || |||||||| ||||    
T  15082199 ctcacctcacaagccggttttgtgggattgtgttaggcccaaacacgatttctaatatggtatcagaacctc 15082128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 334
Target Start/End: Complemental strand, 26192607 - 26192525
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaa 334  Q
    ||||| ||||||| ||||  || ||||| ||||||||||||||||||||| |||| ||||| |||| |||||| || |||||||    
T  26192607 tatcatgtttctgctatcccgtcacccatcatttatatccacgaaccaag-ccaaaagtgtcggtcgtaagggggtatgttaaa 26192525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 6400698 - 6400616
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattg 208  Q
    ||||||||||||||  || |||| ||||||||||||  | |||| |||| || ||||||||||||||||| ||| ||||||||    
T  6400698 tgtgtttataagtggaggcaatcctcacatcacaagtcggttttgtggggttgtgttagacccaaccacggtttttaagattg 6400616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 210
Target Start/End: Original strand, 11085869 - 11085903
Alignment:
Q  176 ttatgttagacccaaccacgatttctaagattgta 210  Q
    |||||||||||||||| ||||||||||||||||||    
T  11085869 ttatgttagacccaacgacgatttctaagattgta 11085903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 11721913 - 11721991
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    |||||||||||| ||| |||| |||| ||| |||| | |||| |||| || |||||| |||||||||||||||||||||    
T  11721913 tgtttataagtgggggcaatcctcacctcataagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 11721991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 458 - 531
Target Start/End: Original strand, 13740688 - 13740764
Alignment:
Q  458 gtgtttatatgtggagtcaatcatcacctcaa---tcggttttgtgaagttgtgttagactcaaccacgacttctaa 531  Q
    ||||||||| |||||| ||||| || |||||    |||||||||||| |||||||||| ||||||||||| ||||||    
T  13740688 gtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaa 13740764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 458 - 531
Target Start/End: Original strand, 13746188 - 13746264
Alignment:
Q  458 gtgtttatatgtggagtcaatcatcacctcaa---tcggttttgtgaagttgtgttagactcaaccacgacttctaa 531  Q
    ||||||||| |||||| ||||| || |||||    |||||||||||| |||||||||| ||||||||||| ||||||    
T  13746188 gtgtttataagtggagacaatcctcgcctcataagtcggttttgtgaggttgtgttaggctcaaccacgatttctaa 13746264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 280 - 342
Target Start/End: Original strand, 34345551 - 34345612
Alignment:
Q  280 catttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||| ||||||||||||   |||||||||||||||| |||| ||||||| ||||||||||    
T  34345551 catttatgtccacgaaccaaacacaatagtgttggtcatgagggggtgtgtt-aagagtccca 34345612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 127 - 219
Target Start/End: Complemental strand, 2736480 - 2736387
Alignment:
Q  127 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||||||||||||| ||| ||| |||||||||||||  | |||| | ||||| |||||  || ||||||||||||||| ||  |||||||||||    
T  2736480 tgtgtttataagtgggggcaattctcacatcacaagtcggttttgttggattgtgttaagcctaaccacgatttctaaaatgatatcagagcct 2736387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 251 - 316
Target Start/End: Complemental strand, 33631764 - 33631699
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    ||||||||||||| |||| ||  ||||||||||||| ||||| |||||||  |||||||| |||||    
T  33631764 tatcaggtttctgctatcgggacacccaccatttatgtccactaaccaagctcaatagtgctggtc 33631699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 71; Significance: 9e-32; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 71; E-Value: 9e-32
Query Start/End: Original strand, 126 - 342
Target Start/End: Complemental strand, 40379523 - 40379313
Alignment:
Q  126 gtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    ||||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||| ||||    
T  40379523 gtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctttcca 40379424  T
Q  225 taatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggga 324  Q
      ||||| ||||||||||||      |||||||||||   |||| ||  ||||||||||||||||||||||||||| |||| |||| ||||| | |||      
T  40379423 agatccattaggccacctgc------tatcaggtttcctctatcgggccacccaccatttatatccacgaaccaagcccaaaagtgctggtcgtgaggag 40379330  T
Q  325 gtgtgttaaagagtccca 342  Q
    ||||||| ||||||||||    
T  40379329 gtgtgtt-aagagtccca 40379313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 126 - 315
Target Start/End: Complemental strand, 15124862 - 15124678
Alignment:
Q  126 gtgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    ||||||||||||||||||| ||||| ||| ||||||   | |||| |||| || |||||||||||||||||||||||||||| ||||||||| |||||||    
T  15124862 gtgtgtttataagtgagggcaatcttcacttcacaattcggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagtctctcca 15124763  T
Q  225 taatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggt 315  Q
      ||||| | | ||||||||      ||||||||||  | |||| ||| | ||||||||||| ||||||||||||||||||||||| ||||    
T  15124762 agatccattggaccacctgc------tatcaggttttcgttatcgggtcatccaccatttatgtccacgaaccaagtccaatagtgctggt 15124678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 2029775 - 2029984
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    ||||||||||||||  || |||| |||| |||||||| | |||| |||| || | |||| ||||||||||||||||||||| |||||||||||||||||     
T  2029775 tgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgttttaggcccaaccacgatttctaagatggtatcagagcctctccaa 2029874  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      ||| ||||||| | |||| |   ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |    
T  2029875 gatccattgggccacctgc------tattaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 2029968  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  2029969 tgtgtt-aagagtccca 2029984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 14466488 - 14466287
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| | | |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  14466488 tgtgtttataagtgggagcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 14466389  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | |||||| ||      |||||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |    
T  14466388 gatccattgggccacttg------ttatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 14466295  T
Q  326 tgtgttaa 333  Q
    ||||||||    
T  14466294 tgtgttaa 14466287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 149 - 342
Target Start/End: Original strand, 16419296 - 16419482
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctacc 248  Q
    ||||| |||||||| | |||| |||| || | |||| ||||||||||||||||||||| |||||||||||||||||  ||||| | ||||||||||        
T  16419296 ctcacctcacaagccggttttgtggggttgtattaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgc---- 16419391  T
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
      ||||||||||| | ||||  |  ||||||||||||| |||||||||||||  |||||||| ||||| | |||| ||||||| ||||||||||    
T  16419392 --tatcaggtttccgctatcgagccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgtgtt-aagagtccca 16419482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 5711753 - 5711543
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc-tcca 224  Q
    |||||||||||||| ||| |||| |||| | | |||| | |||| |||| || |||||| ||||||||| ||||||||||| ||||||||||||| ||||    
T  5711753 tgtgtttataagtgggggcaatcatcaccttaaaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatagtatcagagcctcctcca 5711654  T
Q  225 taatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggga 324  Q
      ||||  | | ||||||||||      ||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | ||||     
T  5711653 agatccgttggaccacctgcta------tcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggg 5711560  T
Q  325 gtgtgttaaagagtccca 342  Q
    ||||||| ||||||||||    
T  5711559 gtgtgtt-aagagtccca 5711543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 5509087 - 5509180
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| |||||||| |||| |||||||||| |||| |||| || |||||| |||||||| ||||||||| || ||||||||||||||    
T  5509087 tgtttataagtgggggtaatcctcacctcacaagctggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagagcctct 5509180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 316
Target Start/End: Complemental strand, 93392 - 93248
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgat 265  Q
    |||| |||| || |||||| |||||||||||||| |||||| |||||||||||||||||  ||||| | ||||||||||      |||||| |||| | |    
T  93392 ttttgtggggttgtgttaggcccaaccacgatttttaagatggtatcagagcctctccaagatccattgggccacctgc------tatcagctttccgtt 93299  T
Q  266 atcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    ||| ||  |||||||| |||| |||||||| |||| ||||||||| |||||    
T  93298 atcgggccacccaccaattatgtccacgaatcaagcccaatagtgctggtc 93248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 129 - 231
Target Start/End: Original strand, 29718336 - 29718439
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    |||||||||||||||| |||| |||| |||||||| | |||| |||| || |||||| || |||||||||||||||| | ||||||||||||||| | ||    
T  29718336 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagttggtatcagagcctctctaaaa 29718435  T
Q  228 tcca 231  Q
    ||||    
T  29718436 tcca 29718439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 33606367 - 33606158
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| |||||||| |||| ||||||||   |||| |||  ||||||||| | |||||||||||||||||||  ||||| || |||| ||     
T  33606367 tgtgtttataagtgggggtaatcctcacctcacaagccagttttgtggcgttatgttaggcacaaccacgatttctaagatgatatcaaagtctcttcaa 33606268  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||| | | || ||| |||||      ||||||||| | |||||||  ||||||||||||| ||||||||||||| | ||||||| ||||| | |||  |    
T  33606267 gatctattgggtcacttgcta------tcaggtttccgctatcaggccacccaccatttatgtccacgaaccaagcctaatagtgatggtcgtgaggtgg 33606174  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  33606173 tgtgtt-aagagtccca 33606158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 28407869 - 28407778
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||  || |||||| ||||||||||||||||||||| ||||||||||||    
T  28407869 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttctaagatggtatcagagcct 28407778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 2324248 - 2324341
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||| ||| || ||||||||||||||    
T  2324248 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttttaatatggtatcagagcctct 2324341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 207
Target Start/End: Original strand, 9927917 - 9927998
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    |||||||||||||| |||||||| |||| ||||||||||||||| |||| || |||||   |||||||||| ||||||||||    
T  9927917 tgtgtttataagtgggggtaatcctcacctcacaagctgattttttggggttgtgttacgtccaaccacgaattctaagatt 9927998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 17855005 - 17854912
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||||| |||| |||| |||||||| | |||| |||| || || |||||||||||||||||||||| ||  |||||||| ||||    
T  17855005 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgctagacccaaccacgatttctaatatgatatcagagtctct 17854912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 333
Target Start/End: Original strand, 16533358 - 16533519
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgat 265  Q
    ||||||| | || ||||| ||||||| |||| |||||| || |||||||||||||| ||  ||||| | ||| ||||||||      ||||||||  | |    
T  16533358 ttttatgaggttgtgttacacccaactacgacttctaaaatggtatcagagcctcttcaagatccattgggctacctgcta------tcaggttttcgct 16533451  T
Q  266 atcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | || | |||||||||    
T  16533452 atcgggccacccaccatttatgtccacgaaccaaggccaatagtgctggtcgtgagagggtgtgttaa 16533519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 17719406 - 17719526
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| | || || |||| | ||||||||| ||||||||||| |||||| || |||||||     
T  17719406 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtcgggttgtgttcggcccaaccacaatttctaagatggtatcaaagtctctccaa 17719505  T
Q  226 aatccactaggccacctgcta 246  Q
     ||||| | ||||||||||||    
T  17719506 gatccatttggccacctgcta 17719526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 19544448 - 19544368
Alignment:
Q  127 tgtgtttataagtgagggtaatctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    |||||||||||||| ||| |||||||| |||||||| | |||| |||   ||||||||  |||||||||||||||||||||    
T  19544448 tgtgtttataagtgggggcaatctcacctcacaagccggttttgtggagctatgttaggtccaaccacgatttctaagatt 19544368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 205
Target Start/End: Complemental strand, 40379288 - 40379208
Alignment:
Q  126 gtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    ||||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  40379288 gtgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40379208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 16419508 - 16419587
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  16419508 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 16419587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 220
Target Start/End: Complemental strand, 21383708 - 21383654
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    |||| |||||||  ||||| ||||||||||||||||||||| |||||||||||||    
T  21383708 ttttgtgggattgagttaggcccaaccacgatttctaagatggtatcagagcctc 21383654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 179 - 316
Target Start/End: Complemental strand, 40149261 - 40149130
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttaccca 278  Q
    |||||| ||||||||| ||||||||||| |||||||||||||| ||  ||||| | || |||||||      |||||| |||| | |||| |   |||||    
T  40149261 tgttaggcccaaccacaatttctaagatggtatcagagcctcttcaagatccattgggtcacctgc------tatcagatttcagctatcggaccaccca 40149168  T
Q  279 ccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    | |||||| ||||||||||||| ||||||||| |||||    
T  40149167 ctatttatgtccacgaaccaagcccaatagtgctggtc 40149130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 280 - 341
Target Start/End: Original strand, 41069261 - 41069322
Alignment:
Q  280 catttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccc 341  Q
    ||||||| |||||||||||||  |||||||  ||||| | ||||||||||||||||||||||    
T  41069261 catttatgtccacgaaccaagctcaatagtactggtcgtgagggagtgtgttaaagagtccc 41069322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 2464783 - 2464847
Alignment:
Q  276 ccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcc 340  Q
    ||||||||||| |||||||||||||  |||||||| || |||| || | ||||||||||||||||    
T  2464783 ccaccatttatgtccacgaaccaagctcaatagtgatgatcatgagagcgtgtgttaaagagtcc 2464847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 17525270 - 17525210
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaa 334  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||| | || | ||||||||||    
T  17525270 acccaccatttatgtccacgaaccaagcccaatagtgatggtcgtgagtgggtgtgttaaa 17525210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 5711517 - 5711438
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  5711517 tgtgtttataagtgggggcaatcctcacctaacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 5711438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 19571052 - 19570973
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| ||| |||  |||||| ||| ||| |||||| ||||||||||||||||||||    
T  19571052 tgtgtttataagtgggggcaatcctcacctcataagtcgattttgtggaattgtgttaggcccaaccacgatttctaaga 19570973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 310
Target Start/End: Complemental strand, 31001942 - 31001883
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtg 310  Q
    ||||||||||| | ||||| |  ||| ||||||||||||||||||||||| |||||||||    
T  31001942 tatcaggtttccgctatcatgccacctaccatttatatccacgaaccaagcccaatagtg 31001883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 181 - 224
Target Start/End: Complemental strand, 31700995 - 31700952
Alignment:
Q  181 ttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    |||| ||||||||||||||||||||| |||| ||||||||||||    
T  31700995 ttaggcccaaccacgatttctaagatggtattagagcctctcca 31700952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 37812462 - 37812372
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||||| |||| ||  ||||||  ||||| ||||||||||||| |||||| || ||||| | |||| ||||||| ||||||||||    
T  37812462 tatcaggtttctgctatcgggccacccactgtttatgtccacgaaccaagcccaataatgctggtcgtgagggggtgtgtt-aagagtccca 37812372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 166 - 224
Target Start/End: Complemental strand, 93665 - 93607
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    |||| |||| || |||||| ||||||||||||||||||||| |||||||| ||| ||||    
T  93665 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagaacctttcca 93607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 13250193 - 13250128
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtc 339  Q
    ||||||||||||| |||||||| || | ||||||||| ||||| | ||||  ||||||||||||||    
T  13250193 acccaccatttatgtccacgaagcatgcccaatagtgatggtcgtgaggggatgtgttaaagagtc 13250128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 15124624 - 15124547
Alignment:
Q  129 tgtttataagtgagggtaatctc-acatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||| ||| |||| | || ||| |||| |||||| |||| || ||||||||||||||||||||| |||||    
T  15124624 tgtttataagtgggggcaatccccacctcataagccgattttgtggggttgtgttagacccaaccacgatttttaaga 15124547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 16419414 - 16419463
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| |||||||| |||||| || |||||||||||    
T  16419414 cacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagg 16419463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 221
Target Start/End: Original strand, 24395907 - 24395964
Alignment:
Q  164 gattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||| |||| || |||||| || |||||||||||||||||  ||||||||||||||    
T  24395907 gattttgtggggttgtgttaggccaaaccacgatttctaagagggtatcagagcctct 24395964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 36352120 - 36352038
Alignment:
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||||||| | |||| ||  |||||||||||||  |||||||| ||| ||||||||||||||| | | || |||||||||    
T  36352120 gttatcaggtttccgttatcgggccacccaccatttat--ccacgaacgaagcccaatagtgttggtcgtgatggggtgtgttaa 36352038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0519 (Bit Score: 70; Significance: 4e-31; HSPs: 1)
Name: scaffold0519
Description:

Target: scaffold0519; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 1922 - 2131
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  1922 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 2021  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||      ||||||||||||| | ||||  || ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |    
T  2022 gatccattgggccacct------gttatcaggtttccgctatcgagtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 2115  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  2116 tgtgtt-aagagtccca 2131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 4e-31; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 11232507 - 11232298
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||     
T  11232507 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctccaa 11232408  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||      ||||||||||||| | ||||  || ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |    
T  11232407 gatccattgggccacct------gttatcaggtttccgctatcgagtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 11232314  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  11232313 tgtgtt-aagagtccca 11232298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 39053007 - 39052798
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||| |||||||||||||| |||| ||||||||||||     
T  39053007 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaacaacgatttctaagatggtattagagcctctccaa 39052908  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | |||| |||||      ||||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||||||||| | |||| |    
T  39052907 gatccatttggccccctgc------tatcaggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgaggggg 39052814  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  39052813 tgtgtt-aagagtccca 39052798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 131 - 353
Target Start/End: Original strand, 8084137 - 8084353
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatc 229  Q
    |||||||||| ||| |||| |||| |||||||||| ||||  ||  || |||||||||||||||||||||||||||| |||||||||||||||||  |||    
T  8084137 tttataagtgggggcaatcctcacctcacaagctggttttgcggagttgtgttagacccaaccacgatttctaagatggtatcagagcctctccaagatc 8084236  T
Q  230 cactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtg 329  Q
    || | |||||| |||      ||||||||||  | |||  | | ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |||||    
T  8084237 cattgggccacatgc------tatcaggttttcgctattggatcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtg 8084330  T
Q  330 ttaaagagtcccaaatcaaacaag 353  Q
    || |||||||||| ||| ||||||    
T  8084331 tt-aagagtcccacatcgaacaag 8084353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 12688078 - 12688287
Alignment:
Q  127 tgtgtttataagtgagggtaatctc-acatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||||||| |||| | || |||||||| | |||| |||  ||||||||||| ||| |||||||||||||||  ||| ||||||||| ||     
T  12688078 tgtgtttataagtgagggcaatccccacctcacaagccggttttgtggagttatgttagactcaaacacgatttctaagatgatattagagcctcttcaa 12688177  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      ||||||||||||  |||  ||  ||||||||||||| ||||||||| ||| ||||||||| ||||||| |||| |    
T  12688178 gatccattgggccacctgc------tatcaggtttcttctattgggccacccaccatttatgtccacgaactaagcccaatagtgatggtcatgaggggg 12688271  T
Q  326 tgtgttaaagagtccca 342  Q
    |||| | ||||||||||    
T  12688272 tgtgat-aagagtccca 12688287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 20301267 - 20301468
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| | || ||||||||   |||| || | || |||||| ||||||||||||||||||||| |||||||||||||| ||     
T  20301267 tgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaa 20301366  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      ||||||||||| | |||| |   ||||||||||||| || |||||||||| ||||||||| ||||| | |||| |    
T  20301367 gatccattgggccacctgc------tatcaggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaatagtgctggtcgtgaggggg 20301460  T
Q  326 tgtgttaa 333  Q
    ||||||||    
T  20301461 tgtgttaa 20301468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 21087899 - 21088100
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| | || ||||||||   |||| || | || |||||| ||||||||||||||||||||| |||||||||||||| ||     
T  21087899 tgtgtttataagtgggggcaatcctaacctcacaagcccgttttgtgaggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaa 21087998  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      ||||||||||| | |||| |   ||||||||||||| || |||||||||| ||||||||| ||||| | |||| |    
T  21087999 gatccattgggccacctgc------tatcaggtttccgctatcggaccacccaccatttatgtctacgaaccaagcccaatagtgctggtcgtgaggggg 21088092  T
Q  326 tgtgttaa 333  Q
    ||||||||    
T  21088093 tgtgttaa 21088100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 127 - 221
Target Start/End: Original strand, 12317052 - 12317147
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||| ||| |||| |||| ||| ||||||||||| ||||||| |||||| ||||||||||||||||||||| ||||||||| ||||    
T  12317052 tgtgtttataagtgggggcaatcctcacctcataagctgattttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagactct 12317147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 127 - 343
Target Start/End: Original strand, 41790665 - 41790874
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||  |||| |||| ||| |||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||| ||     
T  41790665 tgtgtttataagtggggacaatcctcacctcataagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcagagcctcttcaa 41790763  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      ||||||||||| | ||||  |  ||||||||||||| |||| |||||||| |||| |||| ||||| | |||| |    
T  41790764 gatccattgggccacctgc------tatcaggtttccgctatcgagccacccaccatttatgtccatgaaccaagcccaagagtgctggtcgtgaggggg 41790857  T
Q  326 tgtgttaaagagtcccaa 343  Q
    |||||| |||||||||||    
T  41790858 tgtgtt-aagagtcccaa 41790874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 37868004 - 37867939
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtc 339  Q
    ||||||||||||| ||||||||||||| ||||||||||||||| | |||| |||||||||||||||    
T  37868004 acccaccatttatgtccacgaaccaaggccaatagtgttggtcgtgagggtgtgtgttaaagagtc 37867939  T

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Target: chr8; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 24532499 - 24532379
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| |||||||||||| ||||||||||| || ||     
T  24532499 tgtgtttataagtgggggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagccccttcaa 24532400  T
Q  226 aatccactaggccacctgcta 246  Q
     ||||| | ||||||||||||    
T  24532399 gatccattgggccacctgcta 24532379  T

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Target: chr8; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 251 - 347
Target Start/End: Complemental strand, 39052731 - 39052636
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcccaaatca 347  Q
    ||||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||||||||| | |||| ||||||| |||||||||| ||||    
T  39052731 tatcaggtttccgctatccggccacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggggtgtgtt-aagagtcccacatca 39052636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 163 - 340
Target Start/End: Original strand, 10615437 - 10615608
Alignment:
Q  163 tgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttct 262  Q
    ||||||| |||| || ||||||  | |||||  ||||||||||| |||||||||||||||||  ||||| |   ||||||| ||      |||||||||     
T  10615437 tgattttgtggggttgtgttaggtcaaaccataatttctaagatggtatcagagcctctccaagatccattgtaccacctgata------tcaggtttcc 10615530  T
Q  263 gatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcc 340  Q
    | |||| ||| ||| || |||||| ||||||||||||||||||||||| | ||| | |||| ||||||||||||||||    
T  10615531 gctatcgggtcaccaactatttatctccacgaaccaagtccaatagtgctagtcgtgagggtgtgtgttaaagagtcc 10615608  T

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Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 11232272 - 11232174
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    |||||||||||||| ||| |||| |||| | |||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||||||||||||||    
T  11232272 tgtgtttataagtgggggcaatcctcaccttacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcagagcctctcca 11232174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 333
Target Start/End: Complemental strand, 3157614 - 3157436
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctacc 248  Q
    ||||| ||||||||   |||| |||| || |||||| | ||||||| |||| ||||||  |||||||||||||||| |||||| | | ||||||||||      
T  3157614 ctcacctcacaagccagttttgtggggttgtgttaggctcaaccaccatttataagatgatatcagagcctctccaaaatccattggaccacctgcta-- 3157517  T
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
        ||||||||  | |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | || | |||||||||    
T  3157516 ----tcaggttttcgctatcgggacacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagtgggtgtgttaa 3157436  T

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Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 19256896 - 19256803
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  19256896 tgtttataagtgggggcaatcctcacctcacaagcaggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 19256803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 310
Target Start/End: Original strand, 31197621 - 31197798
Alignment:
Q  127 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    ||||||||||||| |||||||| ||||| ||| |||  | |||| | || || |||||| |||||||| |||||||||||| ||||||||||||||||      
T  31197621 tgtgtttataagtaagggtaattctcacctcaaaagtcggttttgtagggttgtgttaggcccaacca-gatttctaagatggtatcagagcctctccga 31197719  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtg 310  Q
     ||||| | ||||||||||      ||||||||||| | |||| |   ||||||||||||| |||||||||||||  ||||||||    
T  31197720 gatccattgggccacctgc------tatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagctcaatagtg 31197798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 274 - 339
Target Start/End: Complemental strand, 37868244 - 37868179
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtc 339  Q
    ||||||||||||| ||||||| ||||| ||||||||||||||| | |||| |||||||||||||||    
T  37868244 acccaccatttatgtccacgagccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtc 37868179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 38476074 - 38476138
Alignment:
Q  156 cacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    ||||||| | |||| |||||||||||||| ||||||||| ||||||||||| |||||||||||||    
T  38476074 cacaagccggttttgtgggattatgttaggcccaaccacaatttctaagatggtatcagagcctc 38476138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 162 - 316
Target Start/End: Complemental strand, 5676098 - 5675950
Alignment:
Q  162 ctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttc 261  Q
    ||||||||||| || |  |||||  ||||||||||||||||||||  |||||||| |||| ||  || |||||||||||||||      ||||||||||     
T  5676098 ctgattttatgagactgcgttaggtccaaccacgatttctaagatgatatcagagtctcttcaagattcactaggccacctgc------tatcaggtttt 5676005  T
Q  262 tgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
     |||||  ||| ||||||||||||| || |||||||||| |||||| || |||||    
T  5676004 cgatattgggtcacccaccatttatgtctacgaaccaagcccaatactgctggtc 5675950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 149 - 339
Target Start/End: Complemental strand, 37868638 - 37868455
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctacc 248  Q
    ||||| |||||||||| |||| ||| ||| |||||| || ||||||||||| |||||| |||||| ||||||||||  ||||| | ||||||      ||    
T  37868638 ctcacctcacaagctggttttgtggaattgtgttaggcctaaccacgatttttaagatggtatcatagcctctccaagatccattgggccac------cc 37868545  T
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtc 339  Q
    | ||||| ||||| | |||  ||  ||||||||||||| | ||||||||||| |||||| || ||||| | |||| | |||||||||||||    
T  37868544 gctatcaagtttccgctattgggccacccaccatttatgtacacgaaccaagcccaatattgctggtcgtgaggg-gggtgttaaagagtc 37868455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 3157203 - 3157121
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |||||||||    
T  3157203 tatcaggtttccgctatcgggacacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 3157121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 128 - 310
Target Start/End: Complemental strand, 8466801 - 8466623
Alignment:
Q  128 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctccat 225  Q
    ||||||||||||| ||  |||| |||| |||||||||| ||||||||| || |||  ||||||||||| ||||||||||| |||||| ||| |  | ||     
T  8466801 gtgtttataagtggggacaatcctcacctcacaagctggttttatggggttgtgtacgacccaaccacaatttctaagatggtatcaaagcttggttcaa 8466702  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtg 310  Q
     ||||| | ||||||||||      ||||||||||| | ||||| |  ||||||||||||||| |||| |||||| |||||||||    
T  8466701 gatccattgggccacctgc------tatcaggtttccgctatcaagccacccaccatttatatgcacgcaccaagcccaatagtg 8466623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 219
Target Start/End: Original strand, 8716120 - 8716213
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||||||| |||||| || |||| |||| ||| |||| |||||| |||| || ||||||||||||||| ||||||||| || ||||||||||||    
T  8716120 tgtgtttaaaagtgaaggcaatcctcacctcataagccgattttgtggggttgtgttagacccaaccaagatttctaatatggtatcagagcct 8716213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 279 - 352
Target Start/End: Original strand, 8849335 - 8849408
Alignment:
Q  279 ccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcccaaatcaaacaa 352  Q
    ||||||||||| | |||||||  ||||||||||||||| | |||| ||||||||||||||| ||||||| ||||    
T  8849335 ccatttatatctatgaaccaaacccaatagtgttggtcgtgagggggtgtgttaaagagtctcaaatcagacaa 8849408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 17469826 - 17469919
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| | |||||||||||||||| || ||||||||||||||    
T  17469826 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggctcaaccacgatttctaatatggtatcagagcctct 17469919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 38475873 - 38475922
Alignment:
Q  265 tatcaggttacccaccatttatatccacgaaccaagtccaatagtgttgg 314  Q
    |||||||  |||||||||||||||||||| ||||||||||||||||||||    
T  38475873 tatcaggccacccaccatttatatccacgcaccaagtccaatagtgttgg 38475922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 290 - 342
Target Start/End: Complemental strand, 10615095 - 10615043
Alignment:
Q  290 cacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||||||||||||||||||  | |||| ||||||||||||||||||    
T  10615095 cacgaaccaagtccaatagtgttggttgtgagggtgtgtgttaaagagtccca 10615043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 316
Target Start/End: Complemental strand, 18004332 - 18004223
Alignment:
Q  201 taagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaag 300  Q
    |||||| |||||||||||||||||  ||||| | ||||||||||||      ||||||||| | |||| ||  ||||||||||||| |||||||||||||    
T  18004332 taagatggtatcagagcctctccaagatccattgggccacctgcta------tcaggtttccgctatcgggccacccaccatttatgtccacgaaccaag 18004239  T
Q  301 tccaatagtgttggtc 316  Q
     | ||||||| |||||    
T  18004238 cctaatagtgctggtc 18004223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 128 - 207
Target Start/End: Original strand, 37001471 - 37001551
Alignment:
Q  128 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    ||||||||||||| ||  |||| ||||||||||||| | |||| |||| || |||||| ||||||||||||||||||||||    
T  37001471 gtgtttataagtggggacaatcctcacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatt 37001551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 42049622 - 42049562
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaa 334  Q
    |||||| |||||| |||||||||||||||||||||||||| || | |||| ||||||||||    
T  42049622 acccactatttatgtccacgaaccaagtccaatagtgttgctcgtgagggggtgtgttaaa 42049562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 265 - 316
Target Start/End: Complemental strand, 5675914 - 5675863
Alignment:
Q  265 tatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    |||| ||| ||||||||||||| ||||||||||||||||||||||| |||||    
T  5675914 tatcgggtcacccaccatttatgtccacgaaccaagtccaatagtgctggtc 5675863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 20094754 - 20094664
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||  | |||||||  ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| | ||||| ||||||||||    
T  20094754 tatcaggttttcgctatcaggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggcgtgtt-aagagtccca 20094664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 5932262 - 5932164
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    |||||||||||||| ||| || | |||| ||||||||   |||| |||| || |||||| ||||||||| |||| |||||| |||||||||||||||||    
T  5932262 tgtgtttataagtgggggcaagcctcacctcacaagcctgttttgtggggttgtgttaggcccaaccaccatttttaagatggtatcagagcctctcca 5932164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 131 - 224
Target Start/End: Complemental strand, 36917513 - 36917419
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    |||||||||| |||||||| ||||||||||||    |||| |||| || |||||  | ||||||| ||||||||||| |||||||||||||||||    
T  36917513 tttataagtgggggtaatcctcacatcacaagtcagttttgtggggttgtgttaagcacaaccaccatttctaagatggtatcagagcctctcca 36917419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 128 - 221
Target Start/End: Original strand, 37001233 - 37001327
Alignment:
Q  128 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    ||||||||| ||| ||| |||| |||| |||||||| | |||| |||  || |||||| ||||||||||||||| ||||| ||||||||||||||    
T  37001233 gtgtttataggtgggggcaatcctcacctcacaagccggttttgtggagttgtgttaggcccaaccacgatttcaaagatggtatcagagcctct 37001327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 4828076 - 4828169
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||  |||| |||| |||||||| | |||| |||| || |||||| |||||||||||| ||||| || ||||||||||||||    
T  4828076 tgtttataagtggggacaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatctctaatatggtatcagagcctct 4828169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 16050037 - 16050130
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    ||||||||||||| || |||| |||| |||||||    |||| |||| || |||||||||||||||||| |||||| || ||||||||||||||    
T  16050037 tgtttataagtgaaggcaatcctcacctcacaagtcagttttgtggggttgtgttagacccaaccacgacttctaatatggtatcagagcctct 16050130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 18939373 - 18939296
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||| ||| |||| |||| ||||||||||||||| || | || |||||| ||||||||| ||||||||||    
T  18939373 tgtttataagtgggggcaatcctcacctcacaagctgattttgtgaggttgtgttaggcccaaccaccatttctaaga 18939296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 265 - 314
Target Start/End: Original strand, 38475976 - 38476025
Alignment:
Q  265 tatcaggttacccaccatttatatccacgaaccaagtccaatagtgttgg 314  Q
    |||||||  |||||||||||||||||| | ||||||||||||||||||||    
T  38475976 tatcaggccacccaccatttatatccatgcaccaagtccaatagtgttgg 38476025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 316
Target Start/End: Original strand, 39960082 - 39960147
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    ||||||||||| | ||||  | |||||||||||||| ||||||||||||| ||||||||| |||||    
T  39960082 tatcaggtttccgctatcgagctacccaccatttatgtccacgaaccaagcccaatagtgctggtc 39960147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 357 - 405
Target Start/End: Complemental strand, 422390 - 422342
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgag 405  Q
    ||||||||| || |||||| |||||||||||||||||||||||| ||||    
T  422390 cacccaccatttttgtccacgaaccaagttcaataatgttggtcatgag 422342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 149 - 217
Target Start/End: Original strand, 10884094 - 10884161
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 217  Q
    ||||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||    
T  10884094 ctcacctcacaagccggttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcagagc 10884161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 148 - 204
Target Start/End: Complemental strand, 15686096 - 15686040
Alignment:
Q  148 tctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaag 204  Q
    |||||| |||||||| | |||| ||||||| |||||||| |||||||||||||||||    
T  15686096 tctcacctcacaagccggttttgtgggattgtgttagactcaaccacgatttctaag 15686040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 19256662 - 19256587
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  19256662 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 19256587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 213
Target Start/End: Original strand, 21369934 - 21370021
Alignment:
Q  127 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatca 213  Q
    |||||||||||  ||||||||||| ||||||| || | |||||||| ||||||||||| ||  |||||| |||| |||||| ||||||    
T  21369934 tgtgtttataaacgagggtaatcttcacatcataaaccgattttattggattatgttaaacttaaccacaatttttaagatggtatca 21370021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 24075382 - 24075307
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  24075382 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 24075307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 219
Target Start/End: Complemental strand, 26208325 - 26208234
Alignment:
Q  129 tgtttataagtgagggtaatctc-acatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||||||||||| ||| |||||| |||||| ||||   ||||||||| || ||||||  ||| |||| ||||||||||| ||||||||||||    
T  26208325 tgtttataagtgggggcaatctccacatcataagccagttttatggggttgtgttaggtccatccacaatttctaagatggtatcagagcct 26208234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 34653159 - 34653233
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    ||||||||||||||| ||||| | ||||||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  34653159 tgtttataagtgagg-taatcctaacatcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 34653233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 35682859 - 35682780
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| || ||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  35682859 tgtgtttataagtgggggcaatcctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 35682780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 203
Target Start/End: Original strand, 39743537 - 39743612
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||||  ||| |||| |||| |||||||| |||||| |||| || |||||| ||||||||||||||||||    
T  39743537 tgtttataagttggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaa 39743612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 224
Target Start/End: Complemental strand, 10615017 - 10614919
Alignment:
Q  127 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    |||||||| || || ||||||||| ||| |||||||| |||||| |||| || | |||| | |||||||||||| ||||||  ||||| ||||||||||    
T  10615017 tgtgtttacaaatgggggtaatcttcacctcacaagccgattttgtggggttgtattaggctcaaccacgatttataagatgatatcatagcctctcca 10614919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 280 - 342
Target Start/End: Complemental strand, 31079728 - 31079666
Alignment:
Q  280 catttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||| ||||||||||||| ||||||| | ||||| | |||  ||||||||||||||||||    
T  31079728 catttatgtccacgaaccaagcccaatagggatggtcgtgaggaggtgtgttaaagagtccca 31079666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 42846682 - 42846604
Alignment:
Q  129 tgtttataagtg-agggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||| |||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  42846682 tgtttataagtggagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 42846604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 334
Target Start/End: Complemental strand, 422389 - 422328
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataag-ggagtgtgttaaa 334  Q
    ||||||||||| | |||||||||||||| ||||| |||||||||| || || ||||||||||    
T  422389 acccaccatttttgtccacgaaccaagttcaataatgttggtcatgagaggggtgtgttaaa 422328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 5675910 - 5675857
Alignment:
Q  353 gggtcacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||||||| ||||||||| ||||||||| ||||| || |||||| ||||    
T  5675910 gggtcacccaccatttatgtccacgaaccaagtccaatagtgctggtcgagagg 5675857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 458 - 534
Target Start/End: Complemental strand, 15042747 - 15042668
Alignment:
Q  458 gtgtttatatgtggagtcaatcatcacctc---aatcggttttgtgaagttgtgttagactcaaccacgacttctaagaa 534  Q
    ||||||||| |||| | |||||||||||||   || || |||||||  |||||||||| ||||||||||| |||||||||    
T  15042747 gtgtttataagtgggggcaatcatcacctcgcaaaccgattttgtggggttgtgttaggctcaaccacgatttctaagaa 15042668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 28069431 - 28069358
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||| ||| |||| |||| |||||| |||||||| |||  || ||||||| |||||||||||||||||    
T  28069431 tttataagtgggggcaatcctcacctcacaaactgattttgtggagttgtgttagatccaaccacgatttctaa 28069358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 35682953 - 35682904
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| |||||||| |||||| || |||||||||||    
T  35682953 cacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagg 35682904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 37868005 - 37867956
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  ||||| ||||||||||||||    
T  37868005 cacccaccatttatgtccacgaaccaaggccaatagtgttggtcgtgagg 37867956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 406
Target Start/End: Complemental strand, 37868249 - 37868196
Alignment:
Q  353 gggtcacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||||||| ||||||||| || |||||  ||||| ||||||||||||||    
T  37868249 gggtcacccaccatttatgtccacgagccaagcccaatagtgttggtcgtgagg 37868196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 39052709 - 39052660
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  ||||| ||||||||||||||    
T  39052709 cacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagg 39052660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 39052866 - 39052817
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  ||||| ||||||||||||||    
T  39052866 cacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagg 39052817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 2e-29; HSPs: 53)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 131 - 342
Target Start/End: Complemental strand, 24346811 - 24346605
Alignment:
Q  131 tttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctccataat 228  Q
    |||||||||| ||||||| ||||| |||||||| | |||| |||| || ||||||||||||||||||||| |||||| |||||||||||| |||||  ||    
T  24346811 tttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacccaaccacgatttttaagatggtatcagagcctcctccaagat 24346712  T
Q  229 ccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgt 328  Q
    ||| | ||||||||||      ||||||||||| | |||| ||  ||||||||||||| |||||||||||||  |||||||| ||||| | |||| ||||    
T  24346711 ccattgggccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgt 24346618  T
Q  329 gttaaagagtccca 342  Q
    ||| ||||||||||    
T  24346617 gtt-aagagtccca 24346605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 41667071 - 41666861
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 224  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||| |||||    
T  41667071 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcca 41666972  T
Q  225 taatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggga 324  Q
      ||||  | ||||||||||      ||||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||| ||||| | ||||     
T  41666971 agatccgttgggccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggg 41666878  T
Q  325 gtgtgttaaagagtccca 342  Q
    ||||||| ||||||||||    
T  41666877 gtgtgtt-aagagtccca 41666861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 24531605 - 24531806
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||| |||||| |||| || |||||  ||||||||||||||||||||| ||||||||||||||| ||    
T  24531605 tgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttatgcccaaccacgatttctaagatggtatcagagcctctctat 24531704  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      |||||| |||||| ||||     ||||| ||||||| ||||||||||||| ||||||||| ||||| | |||| |    
T  24531705 gatccattgggccacctgc------tatcagttttctgttatcgaaccacccaacatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 24531798  T
Q  326 tgtgttaa 333  Q
    ||||||||    
T  24531799 tgtgttaa 24531806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 178 - 333
Target Start/End: Complemental strand, 95527 - 95378
Alignment:
Q  178 atgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttaccc 277  Q
    ||||||| ||||||||||||||||||||| |||||||||||||||||  ||||| | ||||||||||      ||||||||||| |  ||| ||  ||||    
T  95527 atgttaggcccaaccacgatttctaagatggtatcagagcctctccaagatccattgggccacctgc------tatcaggtttccgccatcgggccaccc 95434  T
Q  278 accatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||| ||||||||||||| ||||||||| ||||| | |||| |||||||||    
T  95433 accatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgttaa 95378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 127 - 347
Target Start/End: Original strand, 15480328 - 15480542
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||||| |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||| ||     
T  15480328 tgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttctgttaggcccaaccacgatttctaagatggtatcagagcctcttcaa 15480427  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      ||||||||||| | |||  ||  ||||||||||||| |||| |||||||| | ||| ||| ||||| | |||  |    
T  15480428 gatccattgggccacctgc------tatcaggtttccgctattgggccacccaccatttatgtccatgaaccaagcctaatcgtgctggtcgtgaggagg 15480521  T
Q  326 tgtgttaaagagtcccaaatca 347  Q
    |||||| |||||||||| ||||    
T  15480522 tgtgtt-aagagtcccacatca 15480542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 131 - 342
Target Start/End: Complemental strand, 24270179 - 24269974
Alignment:
Q  131 tttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctccataat 228  Q
    |||||||||| ||||||| ||||| |||||||| | |||| |||| || ||||||||| ||||||||||| |||||| |||||||||||| |||||  ||    
T  24270179 tttataagtgggggtaatactcacctcacaagccggttttgtggggttgtgttagacc-aaccacgatttttaagatggtatcagagcctcctccaagat 24270081  T
Q  229 ccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgt 328  Q
    ||| | ||||||||||      ||||||||||| | |||| ||  ||||||||||||| |||||||||||||  |||||||| ||||| | |||| ||||    
T  24270080 ccattgggccacctgc------tatcaggtttccgttatcgggccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagggggtgt 24269987  T
Q  329 gttaaagagtccca 342  Q
    ||| ||||||||||    
T  24269986 gtt-aagagtccca 24269974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 24528546 - 24528666
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| |||||||||||| ||||||||||||||||||    
T  24528546 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagcctctccat 24528645  T
Q  226 aatccactaggccacctgcta 246  Q
     ||||| | | ||||||||||    
T  24528646 gatccattggaccacctgcta 24528666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 127 - 333
Target Start/End: Complemental strand, 18333778 - 18333577
Alignment:
Q  127 tgtgtttataagtgaggg-taatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    |||||||||||||| ||| ||||| |||| |||||||| | |||| |||| || |||||| ||||||||||| ||||||||| |||||||||||||| ||    
T  18333778 tgtgtttataagtggggggtaatcgtcacctcacaagccggttttgtggggttgtgttaggcccaaccacgaattctaagatggtatcagagcctcttca 18333679  T
Q  225 taatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggga 324  Q
      |||||   ||||||||||      ||||||||||  | |||| ||  ||||||||||||| ||||||||||||| ||| ||||| ||||| | ||||     
T  18333678 agatccatcgggccacctgc------tatcaggttttcgctatcgggccacccaccatttatgtccacgaaccaagcccattagtgctggtcgtgaggg- 18333586  T
Q  325 gtgtgttaa 333  Q
    |||||||||    
T  18333585 gtgtgttaa 18333577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 333
Target Start/End: Complemental strand, 25258377 - 25258178
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    ||||||| |||| ||| |||| |||| |||||||  | |||| |||| || ||||| || ||||||||||||||||||| |||||||||| ||||||  |    
T  25258377 tgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttctccaaga 25258278  T
Q  228 tccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtg 327  Q
    |||| | ||||||||||      ||||||||||| | |||| |   |||||| |||||| ||||||||||||| | |||| || ||||||| |||| |||    
T  25258277 tccattgggccacctgc------tatcaggtttccgctatcggaccacccacaatttatgtccacgaaccaagccaaataatgctggtcatgagggggtg 25258184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 129 - 333
Target Start/End: Complemental strand, 25322167 - 25321968
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    ||||||| |||| ||| |||| |||| |||||||  | |||| |||| || ||||| || ||||||||||||||||||| |||||||||| ||||||  |    
T  25322167 tgtttatcagtgggggcaatcctcacctcacaagtcggttttgtggggttgtgttaaactcaaccacgatttctaagatggtatcagagcttctccaaga 25322068  T
Q  228 tccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtg 327  Q
    |||| | ||||||||||      ||||||||||| | |||| |   |||||| |||||| ||||||||||||| | |||| || ||||||| |||| |||    
T  25322067 tccattgggccacctgc------tatcaggtttccgctatcggaccacccacaatttatgtccacgaaccaagccaaataatgctggtcatgagggggtg 25321974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 17352746 - 17352651
Alignment:
Q  127 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||| ||||||||| ||| ||||||||  |||||  ||| |||||||||  |||||||| ||||||||||| ||||||||||||||    
T  17352746 tgtgtttataagtgggggtaatcttcacctcacaagccaattttgcggggttatgttaggtccaaccaccatttctaagatggtatcagagcctct 17352651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 18140864 - 18140943
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||| ||| |||||||| |||| |||||| ||| |||||||||||| | |||||||||||||||||||||||||    
T  18140864 tgtgtttataggtgggggtaatcctcacttcacaaactggttttatgggattgtattagacccaaccacgatttctaaga 18140943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 26137394 - 26137330
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    ||||||| || |||| |||||||||||||| ||||||||||||||||||| | ||||||||||||    
T  26137394 tcacaagttggttttgtgggattatgttaggcccaaccacgatttctaaggtggtatcagagcct 26137330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 166 - 333
Target Start/End: Complemental strand, 32908990 - 32908830
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgat 265  Q
    |||| |||| || |||||||| ||||||| |||||||||||  ||| ||||||||| ||  ||||| | ||||| ||||||      ||||||||||| |    
T  32908990 ttttgtggggttgtgttagactcaaccacaatttctaagatgatattagagcctcttcaagatccattgggccatctgcta------tcaggtttctgct 32908897  T
Q  266 atcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||| ||| ||||||||||||| || |||||||||  ||||||||| ||||| | |||| |||||||||    
T  32908896 atcgggtcacccaccatttatgtcaacgaaccaaacccaatagtgctggtcgtgaggg-gtgtgttaa 32908830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 33337409 - 33337342
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||||| |||| ||||||| ||||||||||    
T  33337409 acccaccatttatgtccacgaaccaagcccaatagtgctggtcatgagggggtgtgtt-aagagtccca 33337342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 2063811 - 2063717
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||| ||| |||| |||| |||||||  | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||||    
T  2063811 tgtgtttataagtgggggcaatcctcac-tcacaagtcggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct 2063717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 17016046 - 17016004
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  17016046 acccaccatttatgtccacgaaccaagtccaatagtgttggtc 17016004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 179 - 316
Target Start/End: Original strand, 43117706 - 43117837
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttaccca 278  Q
    |||||| |||||| |||||||||||||| |||||||||||| ||||  ||| | | ||||||||||      ||||||||||| | |||| |   |||||    
T  43117706 tgttaggcccaacaacgatttctaagatagtatcagagcctttccaagatctattgggccacctgc------tatcaggtttccgctatcggaccaccca 43117799  T
Q  279 ccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
     ||||||| |||||||||||||  ||||||||||||||    
T  43117800 tcatttatgtccacgaaccaagctcaatagtgttggtc 43117837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 9368601 - 9368810
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    ||||||||||||||  || |||| |||| |||||||| | |||| |||| || |||||| ||||||||  ||||||||| | |||||||||||||| ||     
T  9368601 tgtgtttataagtggaggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccataatttctaaggtggtatcagagcctcttcaa 9368700  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      ||||||||||| | |||  |   ||||||||| ||| ||||||||||||  ||||||||| ||||| | |||| |    
T  9368701 gatccattgggccacctgc------tatcaggtttccgctattggaccacccaccatgtatgtccacgaaccaaacccaatagtgctggtcgtgaggggg 9368794  T
Q  326 tgtgttaaagagtccca 342  Q
    ||| || ||||||||||    
T  9368795 tgtctt-aagagtccca 9368810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 21306897 - 21306974
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    |||||||||| ||| |||| |||| |||||||| | | || ||||||| |||||||||||||||||||||||||||||    
T  21306897 tttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagatt 21306974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 131 - 207
Target Start/End: Original strand, 21314735 - 21314812
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    |||||||||| ||| |||| |||| |||||||| | | || ||||||| |||||||||||||||||||||||||||||    
T  21314735 tttataagtgggggcaatcctcacctcacaagccggtattgtgggattgtgttagacccaaccacgatttctaagatt 21314812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 24487721 - 24487628
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| |||||||| |||| |||||||| | |||| || | || |||||  |||||||||||||||||| || ||||||||||||||    
T  24487721 tgtttataagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttaagcccaaccacgatttctaatatggtatcagagcctct 24487628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 274 - 342
Target Start/End: Complemental strand, 8081285 - 8081218
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| ||||||| ||||||||||    
T  8081285 acccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtccca 8081218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 24346579 - 24346499
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    |||||||||||||| |||||||| |||| |||||||| | ||||||||| || |||||| | ||||||| |||||||||||    
T  24346579 tgtgtttataagtgggggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24346499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 60093 - 60172
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| ||||||||||||||| ||| ||||||||||    
T  60093 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttatgttagacccaatcacaatttctaaga 60172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 203
Target Start/End: Complemental strand, 27133069 - 27132994
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||||||||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  27133069 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 27132994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 41666835 - 41666756
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  41666835 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 41666756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 13296900 - 13296978
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    |||||||||||| ||| || | |||| |||||| | | |||| ||||||| ||||||||||||||||||||||||||||    
T  13296900 tgtttataagtgggggcaaccctcacctcacaaaccggttttgtgggattgtgttagacccaaccacgatttctaagat 13296978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 8098326 - 8098418
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||  |||||||||||||||||| || ||||||||||||||    
T  8098326 tgtttataagtg-gggcaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtatcagagcctct 8098418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 17016047 - 17015998
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||| ||||| ||||||||||||||    
T  17016047 cacccaccatttatgtccacgaaccaagtccaatagtgttggtcgtgagg 17015998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 277 - 349
Target Start/End: Complemental strand, 6919362 - 6919291
Alignment:
Q  277 caccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcccaaatcaaa 349  Q
    |||||||||| ||||||||||||| ||||||||| ||||| | | || ||||||| |||||||||| ||||||    
T  6919362 caccatttatgtccacgaaccaagcccaatagtgctggtcgtgatggtgtgtgtt-aagagtcccacatcaaa 6919291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 155 - 219
Target Start/End: Complemental strand, 8081162 - 8081098
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||||||| | |||| |||| || |||||| |||||||| |||||||||||| ||||||||||||    
T  8081162 tcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaagatggtatcagagcct 8081098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 206
Target Start/End: Complemental strand, 24269948 - 24269869
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    |||||||||||||| |||||||| |||| |||||||| | ||||||||| || |||||| | ||||||| |||||||||||    
T  24269948 tgtgtttataagtg-gggtaatcctcacctcacaagccggttttatggggttgtgttaggctcaaccacaatttctaagat 24269869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 30494666 - 30494702
Alignment:
Q  278 accatttatatccacgaaccaagtccaatagtgttgg 314  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30494666 accatttatatccacgcaccaagtccaatagtgttgg 30494702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 30535009 - 30535045
Alignment:
Q  278 accatttatatccacgaaccaagtccaatagtgttgg 314  Q
    |||||||||||||||| ||||||||||||||||||||    
T  30535009 accatttatatccacgcaccaagtccaatagtgttgg 30535045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 221
Target Start/End: Original strand, 13296683 - 13296773
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||| ||| |||| |||| ||||||||   |||| |||| || |||||| ||||||||||||||||||||| ||||| ||||||||    
T  13296683 tttataagtgggggcaatcctcacctcacaagccagttttgtggg-ttgtgttaggcccaaccacgatttctaagatggtatcggagcctct 13296773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 251 - 342
Target Start/End: Complemental strand, 13700784 - 13700694
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||| | |||||||  |||||||||||||   ||||||||||  ||||||||||||||| ||||   ||||||| ||||||||||    
T  13700784 tatcaggtttccgctatcaggccacccaccatttatgatcacgaaccaaacccaatagtgttggtcgtaagaaggtgtgtt-aagagtccca 13700694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 18333543 - 18333464
Alignment:
Q  127 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||||||| ||||| |||||||| | |||| |||| || |||||| ||||||||| | ||||||||    
T  18333543 tgtgtttataagtgggggtaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacaaattctaaga 18333464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 32908796 - 32908717
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    ||||||||||||||  || |||| |||| |||||| | | ||||  ||| ||||||||||||||||||||||||||||||    
T  32908796 tgtgtttataagtggaggcaatcatcacctcacaaaccggttttgaggggttatgttagacccaaccacgatttctaaga 32908717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 220
Target Start/End: Complemental strand, 1564645 - 1564551
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    |||| ||||||||| ||| |||| ||||||||||||    |||| |||| || |||||| | |||||||||||||||||||  ||||||||||||    
T  1564645 tgtgattataagtgggggcaatcctcacatcacaagacagttttgtggggttgtgttaggctcaaccacgatttctaagatgatatcagagcctc 1564551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 155 - 205
Target Start/End: Original strand, 9187321 - 9187371
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||| |||||| |||| || |||||||| ||||||||||||||||||    
T  9187321 tcacaagccgattttgtggggttgtgttagactcaaccacgatttctaaga 9187371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 274 - 316
Target Start/End: Complemental strand, 11682379 - 11682337
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    |||| ||||||||||||  ||||||||||||||||||||||||    
T  11682379 accccccatttatatccttgaaccaagtccaatagtgttggtc 11682337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 251 - 333
Target Start/End: Original strand, 15590063 - 15590145
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||| ||||| | |||| || ||| |||||||||| ||||||||||||  ||||||||| ||||| | |||| |||||||||    
T  15590063 tatcaagtttccgctatcgggctactcaccatttatgtccacgaaccaaacccaatagtgctggtcgtgagggggtgtgttaa 15590145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 25258149 - 25258091
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    ||||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||||    
T  25258149 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatt 25258091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 149 - 207
Target Start/End: Complemental strand, 25321939 - 25321881
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    ||||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||||    
T  25321939 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatt 25321881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 246
Target Start/End: Complemental strand, 6413712 - 6413615
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    ||||| ||| |||| | |||| |||| || ||||| ||||||| ||||||||||| || |||||| ||||||| ||  ||||| | ||||||||||||    
T  6413712 ctcacctcataagccggttttttggggttgtgttaaacccaacaacgatttctaatatggtatcaaagcctcttcaagatccattgggccacctgcta 6413615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 19522095 - 19522188
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    ||||||| |||| ||| |||| |||| |||||||| | |||| |||| || | || |||||||||||||||||||| || |||||||| |||||    
T  19522095 tgtttattagtgggggcaatcctcacctcacaagccggttttgtggggttgtatttgacccaaccacgatttctaatatggtatcagaacctct 19522188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 150 - 203
Target Start/End: Original strand, 19522350 - 19522403
Alignment:
Q  150 tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||| |||||||| |||||| |||| || |||||||| ||||||||||||||||    
T  19522350 tcacctcacaagccgattttgtggggttgtgttagacacaaccacgatttctaa 19522403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 148 - 221
Target Start/End: Complemental strand, 21209977 - 21209904
Alignment:
Q  148 tctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||| |||||||| | |||| |||| || |||||  |||||||||||||||||| || |||| |||||||||    
T  21209977 tctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaatatggtattagagcctct 21209904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 24270042 - 24269993
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| |||||||| |||||| || |||||||||||    
T  24270042 cacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagg 24269993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 24346673 - 24346624
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| |||||||| |||||| || |||||||||||    
T  24346673 cacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagg 24346624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 283 - 352
Target Start/End: Original strand, 42490530 - 42490599
Alignment:
Q  283 ttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcccaaatcaaacaa 352  Q
    |||| ||||||||||||||| |||||| |||||| | || | |||||||||||||||  | |||||||||    
T  42490530 ttatgtccacgaaccaagtcaaatagtattggtcgtgagagggtgtgttaaagagtcatacatcaaacaa 42490599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 43117794 - 43117843
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    |||||| || ||||||||| |||||||| |||||| ||||||||||||||    
T  43117794 cacccatcatttatgtccacgaaccaagctcaatagtgttggtcgtgagg 43117843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0692 (Bit Score: 59; Significance: 1e-24; HSPs: 1)
Name: scaffold0692
Description:

Target: scaffold0692; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 127 - 331
Target Start/End: Complemental strand, 5832 - 5633
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||  |||||||| | ||||  ||| || |||||| ||||||||||||||||||||| |||||||||||||||||     
T  5832 tgtgtttataagtgggggcaatcctcatctcacaagccggttttgcggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaa 5733  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| |  |||||||||      ||||||||||| | |||| |   ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| |    
T  5732 gatccattgagccacctgc------tatcaggtttccgctatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggg 5639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 59; Significance: 1e-24; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 129 - 333
Target Start/End: Complemental strand, 20327925 - 20327726
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||| ||||||||| || ||||||| ||||||| | ||    
T  20327925 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccatgatttctaatatggtatcagtgcctctctaaaa 20327826  T
Q  228 tccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtg 327  Q
    |||| | ||||||||||      ||||||||||| | |||| ||  ||||||||||||| |||| |||||||| ||||||||||||||| | || | |||    
T  20327825 tccattgggccacctgc------tatcaggtttccgctatcgggccacccaccatttatgtccaggaaccaagcccaatagtgttggtcgtgagcgggtg 20327732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 127 - 333
Target Start/End: Original strand, 16239597 - 16239799
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctcca 224  Q
    |||||||||||||| ||| || | |||| |||||||| | |||| ||||||| |||||| ||||||||||||||||||||| |||||||||||| |||||    
T  16239597 tgtgtttataagtgggggcaaacctcacctcacaagccggttttgtgggattgtgttaggcccaaccacgatttctaagatggtatcagagcctcctcca 16239696  T
Q  225 taatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggga 324  Q
      ||||  | ||||||||||      ||||||||||| | ||||  |  ||||||||||||| |||||||||||||  |||||||| ||||| | ||||     
T  16239697 agatccgtttggccacctgc------tatcaggtttccgttatcgagccacccaccatttatgtccacgaaccaagctcaatagtgatggtcgtgagggg 16239790  T
Q  325 gtgtgttaa 333  Q
    |||||||||    
T  16239791 gtgtgttaa 16239799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 35038506 - 35038298
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| | |||||||| |||| |||| || |||||| ||||||||||| ||||||||| ||||||| |||||||||     
T  35038506 tgtgtttataagtgggggcaatcctcacctgacaagctggttttgtggggttgtgttaggcccaaccacgacttctaagatggtatcagtgcctctccaa 35038407  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||       |||||||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||  ||||| | |||| |    
T  35038406 gatccattgggccacctgc------aatcaggtttccgctatc-ggccacccaccatttatgtccacgaaccaagcccaatagtactggtcgtgaggggg 35038314  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  35038313 tgtgtt-aagagtccca 35038298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 127 - 221
Target Start/End: Original strand, 54368522 - 54368617
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||| ||| |||| |||| |||||||| | ||||||||| || |||||||||||||||||||||||||||| ||||||||||||||    
T  54368522 tgtgtttataagtgggggcaatcctcacctcacaagccggttttatggggttgtgttagacccaaccacgatttctaagatggtatcagagcctct 54368617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 128 - 342
Target Start/End: Original strand, 4155331 - 4155539
Alignment:
Q  128 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccata 226  Q
    ||||||||||||| ||| |||| |||| ||| |||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||| |||||||      
T  4155331 gtgtttataagtgggggcaatcctcacctcaaaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagtctctccaag 4155430  T
Q  227 atccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagt 326  Q
    || || | ||||||||||      ||||||||||| | |||| ||  ||||||| ||||| || |||||||||| ||||||||| ||||| | || | ||    
T  4155431 attcattgggccacctgc------tatcaggtttccgctatcgggccacccaccgtttatgtcgacgaaccaagcccaatagtgctggtcgtgagagggt 4155524  T
Q  327 gtgttaaagagtccca 342  Q
    ||||| ||||||||||    
T  4155525 gtgtt-aagagtccca 4155539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 54567898 - 54568018
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||||||     
T  54567898 tgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctccaa 54567997  T
Q  226 aatccactaggccacctgcta 246  Q
     ||||| |  |||||||||||    
T  54567998 gatccattgagccacctgcta 54568018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 13574999 - 13574788
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| ||||||||   |||| |||| || |||||| ||||||||| |||||||| || |||||| ||||||         
T  13574999 tgtgtttataagtgggggaaatcctcacctcacaagccagttttgtggggttgtgttaggcccaaccacaatttctaatatggtatcaaagcctcagtta 13574900  T
Q  226 a-atccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataaggga 324  Q
    | ||||| | ||||||||||||      ||||||||| | ||||  || ||||||||||||| ||||||||||||| ||||||||| | ||| | |||||    
T  13574899 agatccattgggccacctgcta------tcaggtttccgctatcgtgtcacccaccatttatgtccacgaaccaagcccaatagtgctagtcgtgaggga 13574806  T
Q  325 gtgtgttaaagagtccca 342  Q
    ||||||||||||||||||    
T  13574805 gtgtgttaaagagtccca 13574788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 155 - 316
Target Start/End: Complemental strand, 20303434 - 20303279
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatc 254  Q
    |||||||| | |||| |||| || ||||||  |||||||| |||||||| || ||||||||||||||| | |||||| | ||||||||||||      ||    
T  20303434 tcacaagccggttttgtggggttgtgttaggtccaaccacaatttctaatatggtatcagagcctctctaaaatccattgggccacctgcta------tc 20303341  T
Q  255 aggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
    |||||||   |||| |   ||||||||||||| |||||||||||||||||||||||||||||    
T  20303340 aggtttccactatcggtccacccaccatttatgtccacgaaccaagtccaatagtgttggtc 20303279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 129 - 221
Target Start/End: Complemental strand, 1723152 - 1723059
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||||    
T  1723152 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctct 1723059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 11589793 - 11589886
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  11589793 tgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 11589886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 128 - 220
Target Start/End: Complemental strand, 45139048 - 45138955
Alignment:
Q  128 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    ||||| ||||||| ||| |||| |||| |||||||| | |||| |||| || ||| |||||||||||||||||||||||| |||||||||||||    
T  45139048 gtgttaataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgtaagacccaaccacgatttctaagatggtatcagagcctc 45138955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 342
Target Start/End: Original strand, 34992731 - 34992821
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||||| | | || ||| ||||||||||||| ||||||||||||| ||||||||| ||||| | |||| ||||||| ||||||||||    
T  34992731 tatcaggtttccgctgtcgggtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagggggtgtgtt-aagagtccca 34992821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 150 - 307
Target Start/End: Complemental strand, 26272378 - 26272227
Alignment:
Q  150 tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccg 249  Q
    |||| ||||||||||||||| |||| || |||||||||||||||| |||||||||||  ||||| ||| ||| ||  ||||| | ||||| ||||         
T  26272378 tcacctcacaagctgattttgtggggttgtgttagacccaaccacaatttctaagatgatatcaaagcatcttcaatatccattgggccatctgc----- 26272284  T
Q  250 ttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaata 307  Q
     | ||||||||||| ||||     |||||||||||||  |||||||||||||||||||    
T  26272283 -tttcaggtttctgctatcgttcaacccaccatttatgcccacgaaccaagtccaata 26272227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 39683461 - 39683372
Alignment:
Q  252 atcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    |||||||||||| |||| ||  ||||||||||||| ||||||||||||| |||||| || ||||| | ||||| |||||| ||||||||||    
T  39683461 atcaggtttctgctatcgggccacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagggactgtgtt-aagagtccca 39683372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 207
Target Start/End: Complemental strand, 3975436 - 3975355
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagatt 207  Q
    |||||||||||||| || ||||| |||| || ||||| |||||| ||| ||| |||||||||||||||| ||||||||||||    
T  3975436 tgtgtttataagtggggataatcatcacctctcaagccgattttgtggaattgtgttagacccaaccactatttctaagatt 3975355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 127 - 211
Target Start/End: Complemental strand, 35038272 - 35038187
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtat 211  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||||| |||||    
T  35038272 tgtgtttataagtgggggaaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagaatgtat 35038187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 248
Target Start/End: Original strand, 45828027 - 45828147
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    |||||||||||  ||| |||| |||| |||||||| | |||| || | || |||||| ||| ||||| ||||||||||| |||||||||||||||||  |    
T  45828027 tgtttataagttggggcaatcctcacctcacaagccggttttgtgaggttgtgttaggccctaccacaatttctaagatggtatcagagcctctccaaga 45828126  T
Q  228 tccactaggccacctgctacc 248  Q
    |||| |  |||||||||||||    
T  45828127 tccattgcgccacctgctacc 45828147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 148 - 246
Target Start/End: Complemental strand, 12930184 - 12930085
Alignment:
Q  148 tctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctccataatccactaggccacctgcta 246  Q
    |||||| |||||||| | |||| |||| || |||||| ||||||||| ||||||||||| |||||| ||||| |||||| ||||  | ||||||||||||    
T  12930184 tctcacttcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaagatggtatcaaagcctcctccatgatccgttgggccacctgcta 12930085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 16927027 - 16926932
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||| |||||||| |||  |||||||| | |||| |||| || |||||  | ||||||||||||||||||| ||||||||| ||||    
T  16927027 tgtgtttataagtgggggtaatcctcatctcacaagccggttttgtggggttgtgttaagctcaaccacgatttctaagatggtatcagagtctct 16926932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 219
Target Start/End: Original strand, 17638243 - 17638333
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||||||||||| ||| |||| |||| |||||||||| ||||  ||| || |||||| ||||||||||||||||||||| |||| |||||||    
T  17638243 tgtttataagtg-gggcaatcctcacctcacaagctggttttgaggggttgtgttaggcccaaccacgatttctaagatggtataagagcct 17638333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 150 - 221
Target Start/End: Complemental strand, 28087269 - 28087198
Alignment:
Q  150 tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||| |||||||| | |||| ||||||| ||| |||||||| ||||||||||||||| ||| ||||||||||    
T  28087269 tcacctcacaagccggttttgtgggattgtgtcagacccaatcacgatttctaagatggtaccagagcctct 28087198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 179 - 341
Target Start/End: Complemental strand, 50052797 - 50052645
Alignment:
Q  179 tgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttaccca 278  Q
    |||||| ||||||||| |||||||| |||||||||||||||||| |  ||||| | ||||||||||      ||||||||||||| | || ||| | ||     
T  50052797 tgttaggcccaaccactatttctaatattgtatcagagcctctctaagatcca-tgggccacctgc------tatcaggtttctgctgtcgggtcatccg 50052705  T
Q  279 ccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccc 341  Q
    |||| |||||||||| |||||| ||||   |||| | | | |||| |||||||||||||||||    
T  50052704 ccatctatatccacgcaccaagcccaa---tgttaggcgtgagggggtgtgttaaagagtccc 50052645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 238
Target Start/End: Original strand, 22729106 - 22729218
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||| ||||| ||| |||| |||| |||||||| | |||| || | || |||||| ||||||||| ||||||||||| |||||||| ||| ||||     
T  22729106 tgtgtttacaagtgggggcaatcctcacttcacaagccggttttgtgaggttgtgttaggcccaaccacaatttctaagatggtatcagatcctatccaa 22729205  T
Q  226 aatccactaggcc 238  Q
     ||||||| ||||    
T  22729206 gatccactgggcc 22729218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 214
Target Start/End: Complemental strand, 30179786 - 30179698
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcag 214  Q
    |||||||||||||| |||||||| |||| |||||||    |||| | |||||||||||  |||||||||||||| |||||| |||||||    
T  30179786 tgtgtttataagtgggggtaatcctcacctcacaagtcagttttgtaggattatgttatgcccaaccacgatttataagatggtatcag 30179698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 127 - 206
Target Start/End: Original strand, 31317235 - 31317314
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| ||||||| |||||| | |||||||||||||||||||    
T  31317235 tgtgtttataagtg-gggcaatcctcacctcacaagccggttttgtgggattgtgttaggctcaaccacgatttctaagat 31317314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 333
Target Start/End: Complemental strand, 20303235 - 20303176
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||||||| |||||||||||||||||| |||| ||||| | || | |||||||||    
T  20303235 acccaccatttatgtccacgaaccaagtccaacagtgctggtcgtgagcgggtgtgttaa 20303176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 255 - 342
Target Start/End: Complemental strand, 22775589 - 22775502
Alignment:
Q  255 aggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||||| |||| ||  |||||||||||||||||| | |||||  ||||||||||||| ||| |||  ||||||| | ||||||||    
T  22775589 aggtttctgctatcgggccacccaccatttatatccatgcaccaatcccaatagtgttgggcatgaggtggtgtgtttaggagtccca 22775502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 31317472 - 31317551
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||  |||| |||| |||||||| ||||||  ||| || |||||| ||||||||||||||||||||    
T  31317472 tgtgtttataagtggggaaaatcatcacctcacaagccgattttgcggggttgtgttaggcccaaccacgatttctaaga 31317551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 127 - 204
Target Start/End: Original strand, 45828252 - 45828330
Alignment:
Q  127 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaag 204  Q
    |||||||||||||| ||| ||||| ||| |||||||| | |||| |||| || |||||| |||||||| ||||||||||    
T  45828252 tgtgtttataagtgggggcaatctccacctcacaagcaggttttgtggggttgtgttaggcccaaccatgatttctaag 45828330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 189 - 246
Target Start/End: Complemental strand, 8142662 - 8142605
Alignment:
Q  189 aaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    |||||||||||||||||| ||||||||||||||  | |||||| |||| || ||||||    
T  8142662 aaccacgatttctaagatggtatcagagcctctttaaaatccattaggtcatctgcta 8142605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 16239739 - 16239788
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| |||||||| |||||| || |||||||||||    
T  16239739 cacccaccatttatgtccacgaaccaagctcaatagtgatggtcgtgagg 16239788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 206
Target Start/End: Original strand, 24866226 - 24866283
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    ||||| |||||||| | |||| |||| || |||||| |||||||||||||||||||||    
T  24866226 ctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagat 24866283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 155 - 220
Target Start/End: Original strand, 33640080 - 33640145
Alignment:
Q  155 tcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctc 220  Q
    |||||||| | |||| ||||||| |||||| ||||| ||| |||||||||||  ||||||||||||    
T  33640080 tcacaagccggttttgtgggattgtgttaggcccaatcacaatttctaagatgatatcagagcctc 33640145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 34992749 - 34992802
Alignment:
Q  353 gggtcacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||||||| ||||||||| ||||||||  ||||| || |||||||||||    
T  34992749 gggtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagg 34992802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 39683440 - 39683391
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  |||||||| |||||||||||    
T  39683440 cacccaccatttatgtccacgaaccaagcccaataatgctggtcgtgagg 39683391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 58; Significance: 5e-24; HSPs: 51)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 26176914 - 26177123
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||| ||||||||||||| |||| |||| ||| || | | |||| |||| || |||||| ||||||| |||||||||||||  ||||||||||||||||     
T  26176914 tgtgcttataagtgagggcaatcctcacctcaaaaaccggttttgtggggttgtgttaggcccaaccgcgatttctaagatgatatcagagcctctccaa 26177013  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | ||||||||||      |||||| |||| | |||| |   ||||||||||||||||||||||||||||||||||||| ||||| | | || |    
T  26177014 gatccattgggccacctgc------tatcagatttccgctatcggaccacccaccatttatatccacgaaccaagtccaatagtgctggtcgtgacgggg 26177107  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  26177108 tgtgtt-aagagtccca 26177123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 127 - 342
Target Start/End: Original strand, 38668131 - 38668340
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||  ||||||||  ||||| |||| || |||||| ||||| ||| ||||||||||| ||||||||||||||||||    
T  38668131 tgtgtttataagtgggggcaatcatcatctcacaagccaattttgtggggttgtgttaggcccaatcacaatttctaagatggtatcagagcctctccat 38668230  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| | || |||||      ||||||||||||||| |||| ||| ||| | ||||||| |||| |||||||| |||||| || ||||| | || | |    
T  38668231 gatccattgggtcacct------gttatcaggtttctgctatcgggtcacctatcatttatgtccatgaaccaagcccaatattgctggtcgtgagtggg 38668324  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  38668325 tgtgtt-aagagtccca 38668340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 149 - 334
Target Start/End: Original strand, 27413376 - 27413555
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctacc 248  Q
    ||||| |||||||| |||||| || | || ||||||  ||||||||||||||||||||  ||||||||||||||||  ||| | ||| ||||||          
T  27413376 ctcacctcacaagccgattttgtgaggttgtgttaggtccaaccacgatttctaagatgatatcagagcctctccaagatctattagaccacct------ 27413469  T
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaa 334  Q
    |||||||| |||| | |||| ||  ||||||||||||| |||||||| |||| ||||||||||||||| | || | ||||||||||    
T  27413470 gttatcagatttccgctatcgggccacccaccatttatgtccacgaatcaagcccaatagtgttggtcgtgagagggtgtgttaaa 27413555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 127 - 342
Target Start/End: Complemental strand, 4113084 - 4112875
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||| |||||||||||     
T  4113084 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcggagcctctccaa 4112985  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggag 325  Q
     ||||| |  ||||||  |      ||||||||||| | |||  |   ||||||||||||| |||||||||||||  |||||||| ||||| | |||| |    
T  4112984 gatccattgagccaccatc------tatcaggtttccgctattggaccacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgaggggg 4112891  T
Q  326 tgtgttaaagagtccca 342  Q
    |||||| ||||||||||    
T  4112890 tgtgtt-aagagtccca 4112875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 259 - 352
Target Start/End: Complemental strand, 12376624 - 12376531
Alignment:
Q  259 ttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcccaaatcaaacaa 352  Q
    ||||| |||||||  ||| ||||||||| ||||||||||||| ||||||||||||||| | |||| ||||||||||||||| || |||||||||    
T  12376624 ttctgctatcaggccacctaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtctcacatcaaacaa 12376531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 51589814 - 51589907
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||||| |||| |||| |||||||| |||||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  51589814 tgtttataagtgagggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 51589907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 2859705 - 2859521
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    ||||||||| |||| |||||||| |||| |||||||| | |||| || | || |||||| ||||||||  ||||||||||| |||| ||||||||| ||     
T  2859705 tgtgtttattagtgggggtaatcctcacctcacaagccggttttgtgaggttgtgttagccccaaccatcatttctaagatggtattagagcctcttcaa 2859606  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
     ||||| | |||||||| |||      | ||||||||| |||| ||  ||||||||||||| ||||||||||||| ||||||||| |||||    
T  2859605 gatccattgggccaccttcta------ttaggtttctgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtgctggtc 2859521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 127 - 316
Target Start/End: Complemental strand, 4098480 - 4098297
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| ||| |||| |||| | ||||| || |||| |||| || |||||| ||||||||||||||||||| | ||||||||| |||| ||     
T  4098480 tgtgtttataagtgggggcaatcctcaccttacaagttggttttgtggg-ttgtgttaggcccaaccacgatttctaagttggtatcagagactcttcaa 4098382  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
     ||||| | ||||||||||       |||||||||||| |||| ||  ||||||| ||||| ||||||||||||| |||||| ||||||||    
T  4098381 gatccattgggccacctgc------aatcaggtttctgctatcgggccacccaccctttatgtccacgaaccaagcccaataatgttggtc 4098297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 129 - 298
Target Start/End: Original strand, 30369843 - 30370007
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    |||||||||||  ||| |||| |||| ||||||| |  |||| |||| || |||||| |||||||||||||||||||||||||||||||||||||||  |    
T  30369843 tgtttataagtaggggcaatcctcacctcacaagatagttttgtggggttgtgttaggcccaaccacgatttctaagattgtatcagagcctctccaaga 30369942  T
Q  228 tccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaacca 298  Q
    |||| | || |||||||      |||||||||||   |||| ||  ||||||||||||| |||||||||||    
T  30369943 tccattgggtcacctgc------tatcaggtttccactatcgggccacccaccatttatgtccacgaacca 30370007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 278 - 352
Target Start/End: Complemental strand, 12325464 - 12325390
Alignment:
Q  278 accatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcccaaatcaaacaa 352  Q
    ||||||||| ||||||||||||| ||||||||||||||| | |||| ||||||||||||||| || |||||||||    
T  12325464 accatttatgtccacgaaccaagcccaatagtgttggtcgtgagggtgtgtgttaaagagtctcacatcaaacaa 12325390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 149 - 310
Target Start/End: Original strand, 35772058 - 35772213
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctacc 248  Q
    ||||| || ||||| | |||| |||| || |||||| ||||||||||||||||||||| ||||||||||||   ||  ||||| | ||||| ||||        
T  35772058 ctcacctcgcaagccggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagccttctcaagatccattgggccatctgc---- 35772153  T
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtg 310  Q
      ||||||||||| | |||| ||  ||||||||||||| ||||||||||||| |||||||||    
T  35772154 --tatcaggtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagtg 35772213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 131 - 242
Target Start/End: Complemental strand, 17452902 - 17452790
Alignment:
Q  131 tttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatc 229  Q
    |||||||||| ||| ||||| ||| |||||||| | |||| |||| || |||||| || |||||||||||||||||| |||| |||||||||| | ||||    
T  17452902 tttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaagatggtattagagcctctctaaaatc 17452803  T
Q  230 cactaggccacct 242  Q
    || | ||||||||    
T  17452802 cattgggccacct 17452790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 205
Target Start/End: Complemental strand, 4112618 - 4112539
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||  ||| |||| |||| |||||||| |||||||||||||| |||||| | ||||||||||||||||||    
T  4112618 tgtgtttataagtaggggcaatcatcacctcacaagccgattttatgggattgtgttaggcacaaccacgatttctaaga 4112539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 221
Target Start/End: Complemental strand, 32783359 - 32783264
Alignment:
Q  127 tgtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||| | ||| ||||| ||  |||||||||  |||||||| ||| ||||||| |||||||||||||||||||| ||||||||| ||||    
T  32783359 tgtgtttataagcgggggcaatcttcatctcacaagctagttttatggaattttgttagatccaaccacgatttctaagatggtatcagagtctct 32783264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 128 - 316
Target Start/End: Complemental strand, 39348429 - 39348246
Alignment:
Q  128 gtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct-ctccat 225  Q
    ||||||||||||| ||| |||| |||| |||||| | | |||| |||| || |||||| |||||| |||||||||||||| |||||||||||| |||||     
T  39348429 gtgtttataagtgggggcaatcctcacctcacaaaccggttttgtggggttgtgttaggcccaac-acgatttctaagatggtatcagagcctcctccaa 39348331  T
Q  226 aatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtc 316  Q
      |||| | ||||||||||      |||||||||||   |||| |   ||||||||||||| ||||||||||||| ||||||||| |||||    
T  39348330 ggtccattgggccacctgc------tatcaggtttccactatcggaccacccaccatttatgtccacgaaccaagcccaatagtgctggtc 39348246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 210 - 342
Target Start/End: Original strand, 25713248 - 25713373
Alignment:
Q  210 atcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagt 309  Q
    |||||||||||||||  ||||| | ||||||||||||      ||| ||||| | |||| ||  ||||||||||||| ||||||||||||| ||||||||    
T  25713248 atcagagcctctccaagatccattgggccacctgcta------tcaagtttccgctatcgggccacccaccatttatgtccacgaaccaagcccaatagt 25713341  T
Q  310 gttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||||| | |||| | ||||| ||||||||||    
T  25713342 gttggtcgtgagggggggtgtt-aagagtccca 25713373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 51589000 - 51589093
Alignment:
Q  129 tgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||||||||||||| ||| ||||| |||||||| | |||| |||| || |||||| ||||||||| |||||||| || |||||| |||||||    
T  51589000 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccaccatttctaatatggtatcaaagcctct 51589093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 217
Target Start/End: Original strand, 51589234 - 51589323
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 217  Q
    |||||||||||||||| |||| |||| |||||||| | |||| |||| || |||||| || ||||||||||||||| || ||||||||||    
T  51589234 tgtttataagtgagggcaatcctcacctcacaagccggttttgtggggttgtgttaggcctaaccacgatttctaatatggtatcagagc 51589323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 103 - 203
Target Start/End: Original strand, 52907366 - 52907467
Alignment:
Q  103 atcgcataaaatatggtctaaatgtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttct 201  Q
    |||| |||||||||||| | ||  |||||||||||||| ||| |||| |||| |||||||||| |||| |||| || ||| ||||||||||||||| |||    
T  52907366 atcggataaaatatggtttgaacatgtgtttataagtgggggcaatcctcacctcacaagctggttttgtggggttgtgtaagacccaaccacgatatct 52907465  T
Q  202 aa 203  Q
    ||    
T  52907466 aa 52907467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 3169774 - 3169862
Alignment:
Q  129 tgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagag 216  Q
    |||||||||||| ||| ||||| ||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || |||||||||    
T  3169774 tgtttataagtgggggcaatcttcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagag 3169862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 8870988 - 8870868
Alignment:
Q  127 tgtgtttataagtgagggtaat-ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||  ||| ||| ||||| ||| |||| | |||| |||| || ||||||  |||||||| ||||||||||| ||||||||| |||||||     
T  8870988 tgtgtttataagttggggcaattctcacctcataagccgtttttgtggggttgtgttaggtccaaccaccatttctaagatggtatcagagtctctccaa 8870889  T
Q  226 aatccactaggccacctgcta 246  Q
     ||||| | ||||||||||||    
T  8870888 tatccattgggccacctgcta 8870868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 29265990 - 29266050
Alignment:
Q  157 acaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagc 217  Q
    |||||||| |||| |||| || |||||| ||||||||||||||||||||| ||||||||||    
T  29265990 acaagctggttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagc 29266050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 196 - 342
Target Start/End: Complemental strand, 4112783 - 4112644
Alignment:
Q  196 atttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaa 295  Q
    ||||||||||| |||||||||||||||||  ||||| | | ||||||||||      ||||||||| | ||||     ||||||||||||| || |||||    
T  4112783 atttctaagatggtatcagagcctctccaagatccattggaccacctgcta------tcaggtttccgctatcgaaccacccaccatttatgtcaacgaa 4112690  T
Q  296 ccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    ||||| ||||||||||||||| | |||| | ||||| ||||||||||    
T  4112689 ccaagcccaatagtgttggtcgtgagggggggtgtt-aagagtccca 4112644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 274 - 333
Target Start/End: Original strand, 7307869 - 7307928
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||||||| |||||||||||| |||||||||||||||| | |||| |||| ||||    
T  7307869 acccaccatttatgtccacgaaccaaatccaatagtgttggtcgtgagggggtgtattaa 7307928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 164 - 342
Target Start/End: Original strand, 16162977 - 16163147
Alignment:
Q  164 gattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctg 263  Q
    |||||| |||| || |||||||| ||||||| |||| ||||||  ||||| ||||||||||  ||||| | ||||||||||      ||||||||||| |    
T  16162977 gattttgtggggttgtgttagactcaaccacaatttttaagatgatatcaaagcctctccaagatccaatgggccacctgc------tatcaggtttccg 16163070  T
Q  264 atatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
     |||| ||  ||| ||||||||| ||||||| ||||| || |||||| ||||| | |||| ||||||| ||||||||||    
T  16163071 ctatcgggccacctaccatttatgtccacgagccaag-cccatagtgctggtcgtgagggtgtgtgtt-aagagtccca 16163147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 205
Target Start/End: Original strand, 40079158 - 40079237
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||||    
T  40079158 tgtgtttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga 40079237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 249 - 315
Target Start/End: Complemental strand, 33132438 - 33132372
Alignment:
Q  249 gttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggt 315  Q
    ||||||||||||||| ||||||   ||||  ||||||| | ||||||||||||||||||||||||||    
T  33132438 gttatcaggtttctgctatcagaccacccctcatttatgttcacgaaccaagtccaatagtgttggt 33132372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 251 - 333
Target Start/End: Complemental strand, 34264680 - 34264598
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||||| | |||| ||| | |||||||||||||| ||||||||||  |||||||| ||||| | |||| |||||||||    
T  34264680 tatcaggtttccgctatcgggtcaaccaccatttatatcgacgaaccaagcacaatagtgctggtcgtgagggggtgtgttaa 34264598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 251 - 352
Target Start/End: Original strand, 49142842 - 49142943
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcat-aagggagtgtgttaaagagtcccaaatcaaa 349  Q
    ||||||||||||| |||| || ||||||||| |||| ||||||||||||  |||||||  |||||||| | ||| |||| ||||||||||||| |||| |    
T  49142842 tatcaggtttctgctatcggggtacccacca-ttatgtccacgaaccaaacccaataggtttggtcatgaggggtgtgtattaaagagtcccacatcaga 49142940  T
Q  350 caa 352  Q
    |||    
T  49142941 caa 49142943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 246
Target Start/End: Complemental strand, 51460086 - 51460008
Alignment:
Q  168 ttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    ||||||| || |||||| ||||||||| ||||||||||| |||| || |||||||||  ||||| | ||||||||||||    
T  51460086 ttatggggttgtgttaggcccaaccacaatttctaagatggtattagcgcctctccaagatccattgggccacctgcta 51460008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 251 - 336
Target Start/End: Original strand, 17208679 - 17208764
Alignment:
Q  251 tatcaggtttctgatatcaggttacccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaaga 336  Q
    ||||||||||| | |||| ||  |||||||||||||||||||  |||||| ||||||||||||| | | |||| |||||| |||||    
T  17208679 tatcaggtttccgctatcgggccacccaccatttatatccacccaccaagcccaatagtgttgggcgtgagggggtgtgtgaaaga 17208764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 148 - 221
Target Start/End: Original strand, 25255339 - 25255411
Alignment:
Q  148 tctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    |||||| |||||||| | |||| |||| || |||||| |||||||||||||||||||| ||||||||| |||||    
T  25255339 tctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaaga-tgtatcagatcctct 25255411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 128 - 299
Target Start/End: Complemental strand, 51460519 - 51460353
Alignment:
Q  128 gtgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccata 226  Q
    |||||||||||||  |||||||| ||| | ||||||   |||| |||| || |||||| ||||||||  |||||||| ||  ||||||||||||||||      
T  51460519 gtgtttataagtggtggtaatcttcactttacaagccagttttgtggggttgtgttaggcccaaccataatttctaaaatgatatcagagcctctccaag 51460420  T
Q  227 atccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttatatccacgaaccaa 299  Q
    ||||| | ||||||||||      ||||||||||| | |||| ||  ||||||||||| | ||||||||||||    
T  51460419 atccattgggccacctgc------tatcaggtttccgctatcgggcgacccaccatttgtgtccacgaaccaa 51460353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 11524910 - 11524977
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    |||||| ||||||||||||| |||||||| ||||||||||| ||| | || | ||||||||||||||||    
T  11524910 acccactatttatatccacgcaccaagtctaatagtgttgggcatgatgg-gggtgttaaagagtccca 11524977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 342
Target Start/End: Original strand, 11525125 - 11525192
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtccca 342  Q
    |||||| ||||||||||||| |||||||| ||||||||||| ||| | || | ||||||||||||||||    
T  11525125 acccactatttatatccacgcaccaagtctaatagtgttgggcatgatgg-gggtgttaaagagtccca 11525192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 188 - 316
Target Start/End: Original strand, 38733219 - 38733337
Alignment:
Q  188 caaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgctaccgttatcaggtttctgatatcaggttacccaccatttata 287  Q
    ||||||||||||||||||| ||||||||| |||||||  ||||| | | ||||||||      ||||||||||| | ||||     ||||||||||||||    
T  38733219 caaccacgatttctaagatggtatcagagtctctccaagatccattggaccacctgc------tatcaggtttccgctatc----cacccaccatttata 38733308  T
Q  288 tccacgaaccaagtccaatagtgttggtc 316  Q
    || |||||| ||| ||||||||| |||||    
T  38733309 tctacgaactaagcccaatagtgctggtc 38733337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 333
Target Start/End: Original strand, 369780 - 369839
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||||||| ||||||||||||| ||||||||| ||||| | ||||  ||||||||    
T  369780 acccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgaggggatgtgttaa 369839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 206
Target Start/End: Original strand, 7653515 - 7653562
Alignment:
Q  159 aagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    ||||||||||| ||||||| |||||| ||||||||| |||||||||||    
T  7653515 aagctgattttgtgggattgtgttaggcccaaccacaatttctaagat 7653562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 533
Target Start/End: Complemental strand, 25145527 - 25145484
Alignment:
Q  490 tcggttttgtgaagttgtgttagactcaaccacgacttctaaga 533  Q
    |||||||||||| |||||||||||| ||||||||| ||||||||    
T  25145527 tcggttttgtgaggttgtgttagacccaaccacgatttctaaga 25145484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 149 - 224
Target Start/End: Complemental strand, 25145775 - 25145700
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    ||||| |||||||| |  ||| |||| || |||||| |||||||| ||||||||||||  ||||||||||||||||    
T  25145775 ctcacctcacaagccggatttgtggggttgtgttaggcccaaccatgatttctaagatgatatcagagcctctcca 25145700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 40189154 - 40189116
Alignment:
Q  276 ccaccatttatatccacgaaccaagtccaatagtgttgg 314  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  40189154 ccaccatttatatccacgcaccaagcccaatagtgttgg 40189116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 353 - 406
Target Start/End: Original strand, 369775 - 369828
Alignment:
Q  353 gggtcacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||||||| ||||||||| ||||||||  ||||| || |||||||||||    
T  369775 gggtcacccaccatttatgtccacgaaccaagcccaatagtgctggtcgtgagg 369828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 4098340 - 4098291
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||  ||||||||| ||||||||  ||||||||||||||||||||    
T  4098340 cacccaccctttatgtccacgaaccaagcccaataatgttggtcgtgagg 4098291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Complemental strand, 4112943 - 4112894
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| |||||||| |||||| || |||||||||||    
T  4112943 cacccaccatttatgtccacgaaccaagctcaatagtgctggtcgtgagg 4112894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 7307868 - 7307917
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||| | ||||| ||||||||||||||    
T  7307868 cacccaccatttatgtccacgaaccaaatccaatagtgttggtcgtgagg 7307917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 276 - 333
Target Start/End: Original strand, 7653391 - 7653448
Alignment:
Q  276 ccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaa 333  Q
    ||||||||||| | ||||||||||   |||||||||||||| | ||||||||||||||    
T  7653391 ccaccatttatgtacacgaaccaaacgcaatagtgttggtcgtgagggagtgtgttaa 7653448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 274 - 347
Target Start/End: Original strand, 17412480 - 17412552
Alignment:
Q  274 acccaccatttatatccacgaaccaagtccaatagtgttggtcataagggagtgtgttaaagagtcccaaatca 347  Q
    ||||| ||||||| |||||||| |||| ||||||||||||||| | | || |||||||||| ||||||| ||||    
T  17412480 acccatcatttatgtccacgaatcaagcccaatagtgttggtcgtgatggggtgtgttaaa-agtcccacatca 17412552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 131 - 203
Target Start/End: Complemental strand, 17452753 - 17452680
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaa 203  Q
    |||||||||| ||| |||| |||| |||||||| | |||| |||| || |||||| ||||||||||||||||||    
T  17452753 tttataagtgggggcaatcctcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaa 17452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 357 - 406
Target Start/End: Original strand, 25713305 - 25713354
Alignment:
Q  357 cacccaccagttatgtccaagaaccaagttcaataatgttggtcgtgagg 406  Q
    ||||||||| ||||||||| ||||||||  ||||| ||||||||||||||    
T  25713305 cacccaccatttatgtccacgaaccaagcccaatagtgttggtcgtgagg 25713354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 33156779 - 33156832
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcct 219  Q
    |||| |||| || |||||| ||||||||||||||||||||| |||| |||||||    
T  33156779 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtattagagcct 33156832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 41035903 - 41035826
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    |||||||||||| ||| |||| |||| |||||||| | |||| ||||||| ||||||  ||||| |||||||||||||    
T  41035903 tgtttataagtgggggcaatcctcacctcacaagccggttttgtgggattgtgttaggtccaactacgatttctaaga 41035826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 57; Significance: 2e-23; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 5661 - 5781
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccat 225  Q
    |||||||||||||| |||||||| |||  | |||||| | |||| |||| || |||||||||||||||||||||||||||| |||||||||||||| ||     
T  5661 tgtgtttataagtgggggtaatcctcatcttacaagccggttttgtggggttgtgttagacccaaccacgatttctaagatggtatcagagcctcttcaa 5760  T
Q  226 aatccactaggccacctgcta 246  Q
    |||||| | ||||||||||||    
T  5761 aatccattgggccacctgcta 5781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 46; Significance: 7e-17; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 108 - 212
Target Start/End: Original strand, 67265 - 67370
Alignment:
Q  108 ataaaatatggtctaaatgtgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagat 206  Q
    |||||||||| ||| ||  |||||||||||||| ||| |||| |||| |||||||||| |||||||||||| |||||| | ||| ||||| |||||||||    
T  67265 ataaaatatgatctgaacatgtgtttataagtgggggcaatcatcacctcacaagctggttttatgggattgtgttaggctcaatcacgaattctaagat 67364  T
Q  207 tgtatc 212  Q
    ||||||    
T  67365 tgtatc 67370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 127 - 224
Target Start/End: Original strand, 14309 - 14407
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    |||||||||||||| ||  |||| |||| |||||||| | |||| |||| || |||||| |||||||||| |||||||||| |||||||||||||||||    
T  14309 tgtgtttataagtggggacaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgttttctaagatggtatcagagcctctcca 14407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 224
Target Start/End: Original strand, 81888 - 81946
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctcca 224  Q
    |||| |||| || |||||| ||||||||||||||||||||| |||||||||||||||||    
T  81888 ttttgtggggttgtgttaggcccaaccacgatttctaagatggtatcagagcctctcca 81946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 129 - 221
Target Start/End: Original strand, 56467 - 56560
Alignment:
Q  129 tgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctct 221  Q
    ||||||||| || ||| |||| |||| |||||||| | |||| |||| || |||||| |||||||||||||||||| || ||||||||||||||    
T  56467 tgtttataactgtgggcaatcatcacctcacaagccggttttgtggggttgtgttaggcccaaccacgatttctaatatggtatcagagcctct 56560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0481 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0481
Description:

Target: scaffold0481; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 129 - 228
Target Start/End: Complemental strand, 3547 - 3447
Alignment:
Q  129 tgtttataagtgagggtaatct-cacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataa 227  Q
    |||||||||||| ||  ||||| ||| |||||||| | |||| |||| || |||||||||||| |||||||||||| || |||||||||||| | |||||    
T  3547 tgtttataagtggggacaatcttcacctcacaagccggttttgtggggttgtgttagacccaatcacgatttctaatatggtatcagagccttttcataa 3448  T
Q  228 t 228  Q
    |    
T  3447 t 3447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0766 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0766
Description:

Target: scaffold0766; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 201
Target Start/End: Original strand, 6280 - 6355
Alignment:
Q  127 tgtgtttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttct 201  Q
    |||||||||||||| ||| |||| |||| |||||||| |||||| |||| || |||||| ||||||||||||||||    
T  6280 tgtgtttataagtgggggcaatcctcacctcacaagccgattttgtggggttgtgttaggcccaaccacgatttct 6355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0400 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 3874 - 3971
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    ||||| ||||||||   |||| |||| || |||||| | ||||||| |||||||| || |||||||| ||||||||  ||||||| ||||||||||||    
T  3874 ctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctctccaagatccactgggccacctgcta 3971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0365 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 246
Target Start/End: Original strand, 4518 - 4615
Alignment:
Q  149 ctcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    ||||| ||||||||   |||| |||| || |||||| | ||||||| |||||||| || |||||||| ||||||||  ||||||| ||||||||||||    
T  4518 ctcacctcacaagccagttttgtggggttgtgttaggcacaaccacaatttctaatatggtatcagatcctctccaagatccactgggccacctgcta 4615  T

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Target: scaffold0084 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 165 - 222
Target Start/End: Original strand, 31152 - 31209
Alignment:
Q  165 attttatgggattatgttagacccaaccacgatttctaagattgtatcagagcctctc 222  Q
    ||||||||| |||||||||  ||||||||| | ||||||||| |||||||||||||||    
T  31152 attttatggcattatgttaagcccaaccacaaattctaagatggtatcagagcctctc 31209  T

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Target: scaffold0181 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 205
Target Start/End: Original strand, 20949 - 21024
Alignment:
Q  131 tttataagtgagggtaatc-tcacatcacaagctgattttatgggattatgttagacccaaccacgatttctaaga 205  Q
    ||||||||||| ||||||| |||| |||||||| | |||| |||| || |||||  ||||||||||||||||||||    
T  20949 tttataagtgaaggtaatcctcacctcacaagccggttttgtggggttgtgttaagcccaaccacgatttctaaga 21024  T

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Target: scaffold0045 (Bit Score: 31; Significance: 0.00000007; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 246
Target Start/End: Complemental strand, 41222 - 41164
Alignment:
Q  188 caaccacgatttctaagattgtatcagagcctctccataatccactaggccacctgcta 246  Q
    |||| |||||||||||||| |||||||||||||||||  || || | ||||||||||||    
T  41222 caactacgatttctaagatggtatcagagcctctccaagattcattgggccacctgcta 41164  T

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Target: scaffold0045; HSP #2
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 199
Target Start/End: Complemental strand, 41008 - 40975
Alignment:
Q  166 ttttatgggattatgttagacccaaccacgattt 199  Q
    |||||||||||| |||||||||||||||||||||    
T  41008 ttttatgggattgtgttagacccaaccacgattt 40975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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