View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7711_low_52 (Length: 247)

Name: NF7711_low_52
Description: NF7711
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7711_low_52
NF7711_low_52
[»] chr5 (32 HSPs)
chr5 (7-213)||(26668209-26668415)
chr5 (7-213)||(26939806-26940012)
chr5 (7-213)||(29166932-29167138)
chr5 (16-213)||(6154391-6154588)
chr5 (16-213)||(37247758-37247955)
chr5 (7-213)||(37646014-37646222)
chr5 (7-213)||(7452685-7452892)
chr5 (17-213)||(36430459-36430653)
chr5 (7-213)||(37536896-37537103)
chr5 (17-213)||(36424579-36424775)
chr5 (7-213)||(39519326-39519522)
chr5 (7-213)||(39523965-39524161)
chr5 (16-213)||(10759321-10759517)
chr5 (16-213)||(20180114-20180306)
chr5 (16-182)||(35678888-35679054)
chr5 (16-213)||(12103994-12104182)
chr5 (74-201)||(23757135-23757262)
chr5 (74-201)||(23822591-23822718)
chr5 (19-182)||(23689014-23689177)
chr5 (22-151)||(17162802-17162932)
chr5 (20-146)||(40567628-40567754)
chr5 (30-132)||(40148797-40148897)
chr5 (16-143)||(17159316-17159444)
chr5 (16-182)||(4872827-4872988)
chr5 (46-158)||(6511617-6511729)
chr5 (22-182)||(9725763-9725917)
chr5 (16-103)||(15149605-15149691)
chr5 (124-213)||(40150243-40150332)
chr5 (16-61)||(6511740-6511785)
chr5 (90-143)||(22832535-22832587)
chr5 (16-55)||(22832636-22832675)
chr5 (164-213)||(25668158-25668207)
[»] chr4 (41 HSPs)
chr4 (7-213)||(8694644-8694850)
chr4 (7-218)||(31728320-31728530)
chr4 (7-213)||(31274445-31274651)
chr4 (7-213)||(37263522-37263728)
chr4 (16-213)||(5270382-5270579)
chr4 (16-213)||(37258824-37259019)
chr4 (16-203)||(55252584-55252772)
chr4 (16-213)||(33467962-33468158)
chr4 (16-213)||(16421986-16422182)
chr4 (16-213)||(13064772-13064966)
chr4 (16-213)||(2820732-2820928)
chr4 (16-213)||(12822869-12823066)
chr4 (24-213)||(5925763-5925943)
chr4 (16-200)||(32081139-32081321)
chr4 (16-212)||(51698867-51699065)
chr4 (16-213)||(29349166-29349362)
chr4 (16-158)||(32220578-32220720)
chr4 (16-155)||(19102906-19103045)
chr4 (7-213)||(31766803-31766996)
chr4 (16-182)||(19107518-19107685)
chr4 (16-213)||(13060406-13060604)
chr4 (16-213)||(33462317-33462510)
chr4 (16-179)||(12875344-12875507)
chr4 (56-213)||(19907269-19907425)
chr4 (24-177)||(27183183-27183326)
chr4 (16-213)||(23094049-23094244)
chr4 (24-158)||(40408896-40409026)
chr4 (16-182)||(48275829-48275992)
chr4 (28-182)||(8028148-8028292)
chr4 (30-143)||(12878856-12878968)
chr4 (16-155)||(29984998-29985138)
chr4 (16-96)||(19907188-19907268)
chr4 (19-141)||(47245073-47245193)
chr4 (49-179)||(8029328-8029454)
chr4 (134-201)||(6943820-6943887)
chr4 (32-110)||(6943740-6943818)
chr4 (17-101)||(16948941-16949026)
chr4 (16-59)||(39216186-39216229)
chr4 (33-75)||(16958263-16958305)
chr4 (22-64)||(28601575-28601617)
chr4 (88-180)||(28601630-28601725)
[»] chr1 (22 HSPs)
chr1 (7-213)||(10136256-10136462)
chr1 (16-213)||(25844696-25844893)
chr1 (7-213)||(26926688-26926885)
chr1 (16-213)||(16648591-16648786)
chr1 (7-158)||(51040535-51040686)
chr1 (16-182)||(16036546-16036712)
chr1 (22-185)||(38622135-38622298)
chr1 (16-143)||(11807159-11807286)
chr1 (16-182)||(23191829-23191993)
chr1 (16-129)||(12260916-12261028)
chr1 (16-182)||(19797984-19798151)
chr1 (16-178)||(39586076-39586234)
chr1 (7-81)||(10141024-10141098)
chr1 (27-182)||(40166891-40167046)
chr1 (118-213)||(8138634-8138726)
chr1 (26-134)||(39199805-39199917)
chr1 (16-81)||(47450284-47450349)
chr1 (16-54)||(33300379-33300417)
chr1 (70-155)||(46697309-46697392)
chr1 (16-56)||(46697275-46697315)
chr1 (126-201)||(5100146-5100220)
chr1 (170-213)||(39199735-39199778)
[»] chr3 (28 HSPs)
chr3 (7-213)||(18472937-18473143)
chr3 (16-213)||(23660448-23660645)
chr3 (16-213)||(23665080-23665277)
chr3 (16-213)||(757323-757519)
chr3 (7-213)||(7570174-7570380)
chr3 (16-213)||(14437652-14437846)
chr3 (16-213)||(20520901-20521098)
chr3 (16-213)||(18468152-18468349)
chr3 (7-199)||(55326708-55326899)
chr3 (7-213)||(27709862-27710065)
chr3 (16-213)||(12970767-12970966)
chr3 (16-213)||(46964953-46965149)
chr3 (16-197)||(12964857-12965040)
chr3 (16-182)||(29351167-29351334)
chr3 (16-182)||(55432167-55432330)
chr3 (16-182)||(3656247-3656413)
chr3 (7-103)||(39774894-39774990)
chr3 (16-135)||(7860646-7860767)
chr3 (51-213)||(20175368-20175527)
chr3 (131-210)||(32473106-32473185)
chr3 (16-158)||(12111608-12111741)
chr3 (50-213)||(3426047-3426207)
chr3 (29-143)||(2206859-2206970)
chr3 (16-139)||(12565161-12565291)
chr3 (54-143)||(13149714-13149806)
chr3 (16-139)||(13259560-13259690)
chr3 (96-182)||(38891137-38891222)
chr3 (32-139)||(37834103-37834211)
[»] chr6 (25 HSPs)
chr6 (7-210)||(17963520-17963723)
chr6 (16-213)||(16835120-16835318)
chr6 (7-209)||(6406824-6407025)
chr6 (16-198)||(12405334-12405516)
chr6 (16-216)||(20747253-20747453)
chr6 (24-196)||(17600328-17600497)
chr6 (16-213)||(19994344-19994540)
chr6 (16-213)||(11533661-11533857)
chr6 (16-213)||(11559171-11559367)
chr6 (16-185)||(11569679-11569847)
chr6 (16-210)||(33686606-33686799)
chr6 (16-199)||(2699087-2699271)
chr6 (20-213)||(11612863-11613055)
chr6 (18-155)||(12689911-12690047)
chr6 (38-210)||(22694347-22694517)
chr6 (16-158)||(25313487-25313631)
chr6 (16-158)||(26200981-26201125)
chr6 (16-179)||(22610451-22610612)
chr6 (29-182)||(12797772-12797929)
chr6 (51-218)||(11428933-11429099)
chr6 (16-161)||(17914532-17914678)
chr6 (16-110)||(5856925-5857019)
chr6 (18-81)||(14509919-14509982)
chr6 (27-178)||(19674724-19674874)
chr6 (149-213)||(5857033-5857096)
[»] chr2 (30 HSPs)
chr2 (7-213)||(17974310-17974516)
chr2 (16-213)||(17967923-17968120)
chr2 (7-213)||(30651845-30652051)
chr2 (7-213)||(19891466-19891670)
chr2 (7-213)||(9184376-9184583)
chr2 (7-218)||(9179680-9179892)
chr2 (16-201)||(12797869-12798055)
chr2 (32-218)||(18345372-18345558)
chr2 (16-201)||(29678618-29678803)
chr2 (16-201)||(25496355-25496540)
chr2 (29-213)||(19896903-19897085)
chr2 (16-213)||(25477248-25477445)
chr2 (18-213)||(12361191-12361382)
chr2 (16-182)||(42925666-42925830)
chr2 (16-213)||(1933968-1934147)
chr2 (16-213)||(24536975-24537179)
chr2 (31-182)||(31329017-31329168)
chr2 (31-182)||(31335738-31335889)
chr2 (16-132)||(40846622-40846738)
chr2 (53-213)||(20101609-20101769)
chr2 (16-138)||(34495141-34495262)
chr2 (16-182)||(28604026-28604191)
chr2 (16-155)||(15446300-15446439)
chr2 (16-136)||(25637801-25637920)
chr2 (28-153)||(44630466-44630592)
chr2 (18-141)||(32080318-32080443)
chr2 (18-140)||(7712074-7712198)
chr2 (22-155)||(7735474-7735608)
chr2 (16-103)||(12001968-12002061)
chr2 (170-213)||(40846480-40846523)
[»] chr8 (26 HSPs)
chr8 (16-213)||(40124853-40125050)
chr8 (16-201)||(38181253-38181438)
chr8 (16-212)||(15950528-15950731)
chr8 (16-213)||(1808391-1808587)
chr8 (16-213)||(28559076-28559272)
chr8 (16-201)||(2966525-2966710)
chr8 (16-212)||(28564258-28564451)
chr8 (16-213)||(44924880-44925077)
chr8 (18-200)||(18875357-18875539)
chr8 (21-213)||(1909906-1910099)
chr8 (16-207)||(26780044-26780234)
chr8 (7-141)||(33417461-33417595)
chr8 (27-186)||(7002594-7002755)
chr8 (63-168)||(17021243-17021347)
chr8 (63-168)||(17551680-17551784)
chr8 (18-76)||(23547700-23547758)
chr8 (27-155)||(17953164-17953290)
chr8 (16-71)||(17027081-17027136)
chr8 (16-71)||(17557573-17557628)
chr8 (170-213)||(33417605-33417648)
chr8 (29-133)||(33100541-33100644)
chr8 (115-213)||(17027131-17027223)
chr8 (115-213)||(17557623-17557715)
chr8 (27-81)||(24672410-24672464)
chr8 (21-126)||(28859335-28859438)
chr8 (49-102)||(31440201-31440254)
[»] chr7 (30 HSPs)
chr7 (16-213)||(4931163-4931360)
chr7 (7-213)||(26342138-26342342)
chr7 (16-213)||(12256962-12257158)
chr7 (16-213)||(21672145-21672341)
chr7 (16-213)||(3880908-3881108)
chr7 (27-209)||(3046525-3046706)
chr7 (16-185)||(42625565-42625739)
chr7 (67-207)||(44508261-44508401)
chr7 (16-213)||(10392046-10392246)
chr7 (18-179)||(13313307-13313468)
chr7 (29-177)||(23247554-23247701)
chr7 (22-128)||(12181796-12181902)
chr7 (87-211)||(2595781-2595905)
chr7 (16-182)||(26286146-26286314)
chr7 (88-213)||(12802295-12802419)
chr7 (31-155)||(4580420-4580544)
chr7 (16-91)||(12800330-12800405)
chr7 (16-138)||(9814909-9815032)
chr7 (23-143)||(15973668-15973790)
chr7 (52-182)||(30259238-30259368)
chr7 (56-175)||(23151683-23151804)
chr7 (16-112)||(10716860-10716957)
chr7 (16-80)||(8269240-8269304)
chr7 (34-103)||(10387418-10387488)
chr7 (29-74)||(44508427-44508472)
chr7 (16-107)||(16373288-16373377)
chr7 (16-81)||(6590104-6590169)
chr7 (16-103)||(27246617-27246702)
chr7 (114-158)||(8269346-8269390)
chr7 (16-63)||(23152177-23152224)
[»] scaffold0054 (2 HSPs)
scaffold0054 (16-212)||(30117-30313)
scaffold0054 (28-182)||(26393-26547)
[»] scaffold0352 (1 HSPs)
scaffold0352 (7-213)||(8039-8246)
[»] scaffold0002 (3 HSPs)
scaffold0002 (16-213)||(5004-5201)
scaffold0002 (16-201)||(442911-443095)
scaffold0002 (54-143)||(155196-155288)
[»] scaffold0690 (1 HSPs)
scaffold0690 (16-213)||(6172-6370)
[»] scaffold0057 (1 HSPs)
scaffold0057 (16-212)||(36062-36257)
[»] scaffold0240 (1 HSPs)
scaffold0240 (16-213)||(4911-5106)
[»] scaffold0011 (1 HSPs)
scaffold0011 (53-182)||(64885-65013)
[»] scaffold0595 (1 HSPs)
scaffold0595 (27-138)||(3833-3948)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 5e-80; HSPs: 32)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 26668209 - 26668415
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  26668209 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 26668308  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||    
T  26668309 gggacccccacactctattttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcatccaacatcacatcaat 26668408  T
Q  207 gttccaa 213  Q
    |||||||    
T  26668409 gttccaa 26668415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 26939806 - 26940012
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  26939806 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 26939905  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||    
T  26939906 gggacccccacactctattttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcatccaacatcacatcaat 26940005  T
Q  207 gttccaa 213  Q
    |||||||    
T  26940006 gttccaa 26940012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 29167138 - 29166932
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || ||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  29167138 tcgaataaaataataattactattgtttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 29167039  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
     ||| | ||||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||    
T  29167038 aggaccctcacactctattttttcaattcacacaacattaaatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaat 29166939  T
Q  207 gttccaa 213  Q
    |||||||    
T  29166938 gttccaa 29166932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 6154588 - 6154391
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| |  |    
T  6154588 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 6154489  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||| ||||| |||||| |||||||||||||||||||||||||||||||||||||    
T  6154488 acactctattttttcaattcacacaacattagatcaaaatataattacttgatgtttaattttccaatttttcatccaacatcacatcaatgttccaa 6154391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 37247955 - 37247758
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||| |  |    
T  37247955 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 37247856  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  37247855 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 37247758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 37646222 - 37646014
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataac--gtgtgtgttctattttac 104  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||   |||||||||||||||||     
T  37646222 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactaataatatgtgtgtgttctattttat 37646123  T
Q  105 gtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatca 204  Q
    |||||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||||||||||||||| | ||||||||||    
T  37646122 gtgggacccccacactctattttttcaattcacacaacattagatcaaagtataattacttgatgtttaatcttccaatttttcatcaagcatcacatca 37646023  T
Q  205 atgttccaa 213  Q
    |||||||||    
T  37646022 atgttccaa 37646014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 5e-71
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 7452685 - 7452892
Alignment:
Q  7 tcgaagaatataataattactatta-tttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacg 105  Q
    ||||| || |||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |    
T  7452685 tcgaataaaataataattactattaatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatg 7452784  T
Q  106 tgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaa 205  Q
    ||||| |  |||||||||||||||||||||||||||||||| |||| |||||| ||| ||  | ||||||||||||||||||||||||||||||||||||    
T  7452785 tgggacccccacactctattttttcaattcacacaacattagatcagagtataattactttgtgtttaatcttccaatttttcatccaacatcacatcaa 7452884  T
Q  206 tgttccaa 213  Q
    ||||||||    
T  7452885 tgttccaa 7452892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 36430459 - 36430653
Alignment:
Q  17 taataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttca 116  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| |  ||    
T  36430459 taataattactattatttttatcattaccaaatatttaaaattaaataccataatttaaacactactaatgtgtgtgttctattttatgtgggaccccca 36430558  T
Q  117 cactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||||||||||||||||||||||| || ||| |||| |||   ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36430559 cactctattttttcaattcacacaacattagattaaaatataatta--cgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 36430653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 37537103 - 37536896
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataac--gtgtgtgttctattttac 104  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||   |||||||||||||||||     
T  37537103 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgtgttctattttat 37537004  T
Q  105 gtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatca 204  Q
    |||||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||||||| ||||||||||| | ||||||||||    
T  37537003 gtgggaccc-cacactctattttttcaattcacacaacattatatcaaagtataattacttgatgtttaatcttctaatttttcatcaagcatcacatca 37536905  T
Q  205 atgttccaa 213  Q
    |||||||||    
T  37536904 atgttccaa 37536896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 36424579 - 36424775
Alignment:
Q  17 taataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttca 116  Q
    ||||||||| ||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||| ||| || |  ||    
T  36424579 taataattaatattatttttatcattaccaagtatttaaaattaaataccacaatttaagcactactaatgtgtgtgttctattttatgtgagaccccca 36424678  T
Q  117 cactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||||||||||||||||||||||| |||| |||||| ||| ||| | |||||||||||||||||| |||||||||||||||||||||||||    
T  36424679 cactctattttttcaattcacacaacattagatcatagtataattacttggtgtttaatcttccaattttttatccaacatcacatcaatgttccaa 36424775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 39519326 - 39519522
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||           ||||||||||||||||| |     
T  39519326 tcgaataaaataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaat----------gtgtgtgttctattttatgc 39519415  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| |||||||||||||||||||||||||||    
T  39519416 gggacccccacactctattttttcaattcacacaacattagatcaaagtatatttacttggtgtttaatctttcaatttttcatccaacatcacatcaat 39519515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 39523965 - 39524161
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||           ||||||||||||||||| |     
T  39523965 tcgaataaaataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaat----------gtgtgtgttctattttatgc 39524054  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
     ||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| |||||||||||||||||||||||||||    
T  39524055 tggacccccacactctattttttcaattcacacaacattagatcaaagtatatttatttggtgtttaatctttcaatttttcatccaacatcacatcaat 39524154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 10759517 - 10759321
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||| |||| |||||||||||| |||||| |       
T  10759517 ataataattactattatttttatcattatcaagtatttaaaattaaatactgcaatttaaacactactaatgtgtctgttctattttatgtgggacccct 10759418  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||||||| |||||||||||||||| |||||| |||| ||| ||| | |||||||||||||||| |  ||||||||||||  ||||||||||    
T  10759417 acactctatttttttaattcacacaacattaaatcaaaatataattacttg-tgtttaatcttccaatttattttccaacatcacactaatgttccaa 10759321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 20180306 - 20180114
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||||||||||   ||||||||||||||||  ||||||||||||| ||| ||||||||||||||||| |||||  |  |    
T  20180306 ataataattactattatttttatcattatcaa---tttaaaattaaataccgtaatttaaacactactaatgtgtgtgttctattttatgtgggtcc--c 20180212  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||  ||||||| |||||||||||||||||| || |||||||| ||| ||| | |||||||||||||||||||  ||| ||||||| |||||||||||    
T  20180211 acatcctattttctcaattcacacaacattagattaaagtataattacttggtgtttaatcttccaatttttctaccagcatcacaccaatgttccaa 20180114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 35679054 - 35678888
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtggga-tctt 114  Q
    |||||||| | ||||||||  ||||||||||  |||||||||| ||||||||| |||||||||||| ||| ||||||||||||||||| |||||| ||||    
T  35679054 ataataataattattatttgcatcattatcaggtatttaaaataaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggactctt 35678955  T
Q  115 cacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
     |||||||||||||||||||||||||||| || |||||||| || ||| ||||| |||||||||||||    
T  35678954 -acactctattttttcaattcacacaacactagatcaaagtttaattacttgatgtttaatcttccaa 35678888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 12103994 - 12104182
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| |||||||||| |||||| |||||| |  |    
T  12103994 ataataactactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttccattttatgtgggaccccc 12104093  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    || ||||||||         ||||||||||| ||||||||||| ||| ||| | ||| |||||| |||||||| ||||||||||||  ||||||||||    
T  12104094 actctctattt---------acacaacattagatcaaagtataattacttggtgtttcatcttctaatttttcttccaacatcacactaatgttccaa 12104182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 23757262 - 23757135
Alignment:
Q  74 aaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatattta 173  Q
    |||||||||||| ||||||||||||||||  |||||| |  |||||||||||||||||||||||||||||||| ||| ||||||| ||| ||| | ||||    
T  23757262 aaacactaataatgtgtgtgttctattttgtgtgggacccccacactctattttttcaattcacacaacattaaatctaagtataattacttggtgttta 23757163  T
Q  174 atcttccaatttttcatccaacatcaca 201  Q
    ||||||||||||||| ||||||||||||    
T  23757162 atcttccaatttttcttccaacatcaca 23757135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 74 - 201
Target Start/End: Complemental strand, 23822718 - 23822591
Alignment:
Q  74 aaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatattta 173  Q
    |||||||||||| ||||||||||||||||  |||||| |  |||||||||||||||||||||||||||||||| ||| ||||||| ||| ||| | ||||    
T  23822718 aaacactaataatgtgtgtgttctattttgtgtgggacccccacactctattttttcaattcacacaacattaaatctaagtataattacttggtgttta 23822619  T
Q  174 atcttccaatttttcatccaacatcaca 201  Q
    ||||||||||||||| ||||||||||||    
T  23822618 atcttccaatttttcttccaacatcaca 23822591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 19 - 182
Target Start/End: Original strand, 23689014 - 23689177
Alignment:
Q  19 ataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcaca 118  Q
    ||||||||||||||||||| |||||| |  ||||||||||||||||||||||||| |||||||  || ||||||||||||||||| ||||||||  ||||    
T  23689014 ataattactattatttttaccattataaggtatttaaaattaaataccacaattttaacactacgaatgtgtgtgttctattttatgtgggatccccaca 23689113  T
Q  119 ctctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||| ||||||||||| |||| | || || |||||||| || ||  ||| | |||||||||||||    
T  23689114 ctcaattttttcaatccacaaatcactagatcaaagtctaattgtttggtgtttaatcttccaa 23689177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 22 - 151
Target Start/End: Original strand, 17162802 - 17162932
Alignment:
Q  22 attactattatttttatcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacact 120  Q
    |||||||||||||||||||||||||  ||||||||| ||||||||| |||||||||||| | ||| ||||||||||||||||| ||||||    |||| |    
T  17162802 attactattatttttatcattatcaggtatttaaaaattaaatacctcaatttaaacaccactaatgtgtgtgttctattttatgtgggactcccacatt 17162901  T
Q  121 ctattttttcaattcacacaacattacatca 151  Q
    |||||||||||||||| ||||||||| ||||    
T  17162902 ctattttttcaattcatacaacattagatca 17162932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 20 - 146
Target Start/End: Complemental strand, 40567754 - 40567628
Alignment:
Q  20 taattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacac 119  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||||||||||| |||||||  ||| | |  ||||     
T  40567754 taattactattatttttatcattataagatatttaaaattaaataccacaatttaatcactactaacgtgtgtgttttattttatatggtacccccacat 40567655  T
Q  120 tctattttttcaattcacacaacatta 146  Q
    | |||||||| ||||||||| ||||||    
T  40567654 tatatttttttaattcacaccacatta 40567628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 30 - 132
Target Start/End: Original strand, 40148797 - 40148897
Alignment:
Q  30 tatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctatttttt 129  Q
    |||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| |||| |||||||||||| |||||| |  |||||||||||||||    
T  40148797 tatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtttgttctattttatgtgggacc--cacactctatttttt 40148894  T
Q  130 caa 132  Q
    |||    
T  40148895 caa 40148897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 17159316 - 17159444
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    ||||| |||||||||||||||||||||||||  ||||||||| ||||||||| ||||| |||||||| ||| |||||| |||||||||| ||||||        
T  17159316 ataatcattactattatttttatcattatcaggtatttaaaaattaaatacctcaattaaaacactactaatgtgtgtcttctattttatgtgggacacc 17159415  T
Q  115 cacactctattttttcaattcacacaaca 143  Q
    |||| ||||||||||||||||| ||||||    
T  17159416 cacattctattttttcaattcatacaaca 17159444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 4872827 - 4872988
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| ||||||||| |||||| |     ||||||||||||||| ||| |||||||||||| ||  |||||||||||||||||  ||| | |  |    
T  4872827 ataataattattattattttcatcattgt-----atttaaaattaaatatcactatttaaacactactattgtgtgtgttctattttatatggaaccccc 4872921  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    |||||||||||||||||||||||||||| || |||||||| || | | ||| | |||||||||||||    
T  4872922 acactctattttttcaattcacacaacactaaatcaaagtttaataatttggtgtttaatcttccaa 4872988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 46 - 158
Target Start/End: Complemental strand, 6511729 - 6511617
Alignment:
Q  46 aaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacatt 145  Q
    ||||||||||||||||||||  |||||||||||||| ||| ||||| ||||||||||| ||||||    ||||||  |||||||||||||||||||||||    
T  6511729 aaatatttaaaattaaatactgcaatttaaacactactaatgtgtgagttctattttatgtgggactcccacacttaattttttcaattcacacaacatt 6511630  T
Q  146 acatcaaagtata 158  Q
    | |||||| ||||    
T  6511629 agatcaaaatata 6511617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 22 - 182
Target Start/End: Complemental strand, 9725917 - 9725763
Alignment:
Q  22 attactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactc 121  Q
    |||| |||||| || |||||||||   |||||||||||||||||||| |||||||||||       |||||||||||||||| ||||||  | |||||||    
T  9725917 attattattatcttcatcattatccggtatttaaaattaaataccactatttaaacact-------tgtgtgttctattttatgtgggacatccacactc 9725825  T
Q  122 tatttttt-caattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    |||||||| |||||||||||||| || |||||||| || | | ||| | |||||||||||||    
T  9725824 tatttttttcaattcacacaacactatatcaaagtttaataacttggtgtttaatcttccaa 9725763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 103
Target Start/End: Original strand, 15149605 - 15149691
Alignment:
Q  16 ataataattactattatttttatcattatcaaatat-ttaaaattaaataccacaatttaaacactaataacgtgtgtgttctatttta 103  Q
    ||||||||||||||||||||||||||||||| |||| | ||||||||||| |  ||||||||||||| |||  ||||||||||||||||    
T  15149605 ataataattactattatttttatcattatcagatatctaaaaattaaatatcttaatttaaacactattaa--tgtgtgttctatttta 15149691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 213
Target Start/End: Original strand, 40150243 - 40150332
Alignment:
Q  124 ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |  | ||||||||||  ||||||||||    
T  40150243 ttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttatttttcaacatcacactaatgttccaa 40150332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 61
Target Start/End: Complemental strand, 6511785 - 6511740
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaa 61  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  6511785 ataataattactattatttttatcattatcaagtatttaaaattaa 6511740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 90 - 143
Target Start/End: Complemental strand, 22832587 - 22832535
Alignment:
Q  90 tgtgttctattttacgtgggatcttcacactctattttttcaattcacacaaca 143  Q
    |||||||||||||| ||||  | |||||||||||||||||||||||||||||||    
T  22832587 tgtgttctattttatgtggact-ttcacactctattttttcaattcacacaaca 22832535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 55
Target Start/End: Complemental strand, 22832675 - 22832636
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaa 55  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  22832675 ataataattactattatttttaacattatcaagtatttaa 22832636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 164 - 213
Target Start/End: Complemental strand, 25668207 - 25668158
Alignment:
Q  164 ttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||| ||||||||||||||||||| |||||||  ||| |||||||||||    
T  25668207 ttgatgtttaatcttccaatttttcttccaacacaacaccaatgttccaa 25668158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 151; Significance: 5e-80; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 8694644 - 8694850
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  8694644 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 8694743  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||    
T  8694744 gggacccccacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaat 8694843  T
Q  207 gttccaa 213  Q
    |||||||    
T  8694844 gttccaa 8694850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 31728530 - 31728320
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || ||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  31728530 tcgaataaaataataattactattatttttatcattatgaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 31728431  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| |||||| |||| ||| ||| | |||||||||||||||||||||||||||||||||||||    
T  31728430 gggaccc-cacactctattttttcaattcacacaacattagatcaaattataattacttggtgtttaatcttccaatttttcatccaacatcacatcaat 31728332  T
Q  207 gttccaagagta 218  Q
    ||||||| ||||    
T  31728331 gttccaacagta 31728320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 31274445 - 31274651
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || ||||||||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |     
T  31274445 tcgaataaaataataattactattatttttatcactgtcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgc 31274544  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| |||||||||||||||||||||||||||    
T  31274545 gggacccccacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaat 31274644  T
Q  207 gttccaa 213  Q
    |||||||    
T  31274645 gttccaa 31274651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 37263728 - 37263522
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |     
T  37263728 tcgaataaaataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgc 37263629  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| |||||||||||| ||||||||||||||    
T  37263628 gggacccccacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatcaaacatcacatcaat 37263529  T
Q  207 gttccaa 213  Q
    |||||||    
T  37263528 gttccaa 37263522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 131; E-Value: 4e-68
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 5270579 - 5270382
Alignment:
Q  16 ataataattactattatttttatcattatcaaa-tatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| |||||| |      
T  5270579 ataataactactattatttttatcattatcaaagtatttaaaattaaataccacaatttaaatactactaatgtgtgtgttctattttatgtgggaccc- 5270481  T
Q  115 cacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||| ||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  5270480 cacattctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 5270382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 37259019 - 37258824
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||| |  |    
T  37259019 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 37258920  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| |||||||  || ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  37258919 acactctattttttcaattcacacaacattagatcaaag--taattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 37258824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 16 - 203
Target Start/End: Original strand, 55252584 - 55252772
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||| |||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| |  |    
T  55252584 ataataattgctattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccacc 55252683  T
Q  116 acactcta-ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatc 203  Q
    |||||||| ||||||||||||||||||||||| ||||||||||| ||| ||||| |||| |||||||||||||||||||||||||||||    
T  55252684 acactctatttttttcaattcacacaacattaaatcaaagtataattacttgatgtttagtcttccaatttttcatccaacatcacatc 55252772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 33468158 - 33467962
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||| |||||| | |     
T  33468158 ataataattactattatttttatcattatcaagtatttaaaattaaatactacaatttaaacactactaatgtgtgtgttctattttatgtgggaacct- 33468060  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||| ||||||||||||  ||||||||||    
T  33468059 acactctattttttcaatttacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcttccaacatcacactaatgttccaa 33467962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 16421986 - 16422182
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||||||||| ||| | ||||||||||||||| |||||| |  |    
T  16421986 ataataattactattatttttatcattatcaagtattgaaaattaaataccgcaatttaaacactactaatgcgtgtgttctattttatgtgggaccccc 16422085  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |  |||||||||||| |||||||||||    
T  16422086 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcaca-caatgttccaa 16422182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 13064966 - 13064772
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| | | ||||||||||||||||| |||||| |  |    
T  13064966 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactattgatgtgtgtgttctattttatgtgggaccccc 13064867  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||||||||||||||   ||||||| ||||||||||| ||| ||| |||||| | |||||||||||| |||||||||||| |||||||||||    
T  13064866 acactctattttttcaattca---aacattagatcaaagtataattacttggtatttatttttccaatttttcttccaacatcacaccaatgttccaa 13064772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 2820732 - 2820928
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| |  |    
T  2820732 ataataattactattatttttatcattatcaaataattaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 2820831  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||| ||||||||||||||||||| || |||||| |||| ||| ||| | ||||||||||||||||| | |||||| ||||| |||||||||||    
T  2820832 acactctaatttttcaattcacacaacactagatcaaa-tataattacttggtgtttaatcttccaattttccttccaacttcacaccaatgttccaa 2820928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 12823066 - 12822869
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||| |||||| |  |    
T  12823066 ataataattactattatttttatcattataaagtatttaaaattaaataccacagtttaaacactactaatgtgtgagttctattttatgtgggaccccc 12822967  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||| |||||||||||| |  ||||||||||||  ||||||||||    
T  12822966 acactctattttttcaattcacacaacattagatcaaagtataattatttggtgtttgatcttccaatttattttccaacatcacactaatgttccaa 12822869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 24 - 213
Target Start/End: Complemental strand, 5925943 - 5925763
Alignment:
Q  24 tactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactcta 123  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||  |||||||||||||||| |||||| |  ||           
T  5925943 tactattatttttatcattatcaagtatttaaaattaaataccataatttaaacactactaa--tgtgtgttctattttatgtgggaccccca------- 5925853  T
Q  124 ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  5925852 ttttttcaattcacacaacattatatcaaagtataattacttggtatttaatcttccaatttttcatccaacatcacatcaatgttccaa 5925763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 16 - 200
Target Start/End: Complemental strand, 32081321 - 32081139
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||| |||||||||||||||| ||| ||||| |||||||||||||||||| || |    
T  32081321 ataataattactattatttttataattatcaagtatttaaaattaaatatcacaatttaaacactactaatgtgtgagttctattttacgtgggacctcc 32081222  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagt-tgatatttaatcttccaatttttcatccaacatcac 200  Q
    ||||||||||||||||||||||   |||||| ||||||||||| ||| | | || |||||||||||||||| |  |||||||||||    
T  32081221 acactctattttttcaattcac---acattagatcaaagtataattactattatgtttaatcttccaatttattttccaacatcac 32081139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 51698867 - 51699065
Alignment:
Q  16 ataataattactattatttt--tatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatct 113  Q
    ||||||||||||||| ||||  ||||||||||||  ||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| |     
T  51698867 ataataattactattttttttttatcattatcaagcatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccc 51698966  T
Q  114 tcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttcca 212  Q
     ||||||||||||||||||||||| ||||||||  |||||||||| ||| ||| | ||||||||| |||||| |  |||||||||| |  |||||||||    
T  51698967 ccacactctattttttcaattcacgcaacattagttcaaagtataattatttggtgtttaatctttcaatttattttccaacatcaaactaatgttcca 51699065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 29349362 - 29349166
Alignment:
Q  16 ataataattactattattttt-atcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    |||||||||| |||||||||| ||||||||| | |||||||||||||||||| |||||||||||||  ||| ||||| ||||||||||| |||||| | |    
T  29349362 ataataattaatattattttttatcattatccagtatttaaaattaaataccgcaatttaaacactgctaatgtgtgagttctattttatgtggga-cct 29349264  T
Q  115 cacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||| ||||| || ||||||||||| ||| ||  | |||||||||||| |||| | |||||||||||| |||||||||||    
T  29349263 cacactctattttttcaattcactcaacacta-atcaaagtataattacttagtgtttaatcttccagttttccttccaacatcacaccaatgttccaa 29349166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 32220720 - 32220578
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||| |||| |||||||||||| |||||| |  |    
T  32220720 ataataattactattatttttatcattatcaaatatttaaaattaaatatcggaatttaaacactaataatgtgtatgttctattttatgtgggaccccc 32220621  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtata 158  Q
    |||||||||||||| ||||||||||| |||| |||||| ||||    
T  32220620 acactctatttttttaattcacacaatattagatcaaaatata 32220578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 19102906 - 19103045
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| ||||||||| ||||||||||  |||||||||||||||| ||| |||||||||||| ||| ||||||||||||||||| |||||| || |    
T  19102906 ataataattattattattttcatcattatcaggtatttaaaattaaatatcactatttaaacactattaatgtgtgtgttctattttatgtgggacctcc 19103005  T
Q  116 acactctattttttcaattcacacaacattacatcaaagt 155  Q
    |||||||||||||||||||||||||||| || ||||||||    
T  19103006 acactctattttttcaattcacacaacactagatcaaagt 19103045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 31766803 - 31766996
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatattt-aaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacg 105  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||| |    
T  31766803 tcgaataaaataataattactattatttttatcattatcaagtatttaaaaattaaataccacaattt-aacactattaatgtgtgtgttctattttatg 31766901  T
Q  106 tgggatcttcacactcta-ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatca 204  Q
    ||||| |  |||| |||| ||||||||||||||| ||||||| |||||||             ||||||||||| |||||||||||||||||||||||||    
T  31766902 tgggacccccacaatctatttttttcaattcaca-aacattagatcaaag-------------tatttaatctttcaatttttcatccaacatcacatca 31766987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 19107518 - 19107685
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| ||||||||| ||||||||||  |||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| |||||| || |    
T  19107518 ataataattattattattttcatcattatcaggtatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 19107617  T
Q  116 acactctattttttcaattcacacaaca-ttacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||||||||| |||||||||||||||| | ||| |||||||| || | | ||| | |||||||||||||    
T  19107618 acactctatattttcaattcacacaatacttagatcaaagtttaataacttggtgtttaatcttccaa 19107685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 13060406 - 13060604
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||| ||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||||||||  || ||||| ||||| ||||| ||| || |  |    
T  13060406 ataagaattactattattgttatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgagttcttttttatgtgtgaccacc 13060505  T
Q  116 acactcta-ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||| |||||||||||||||||| |||| ||||||||||| ||| |||   |||||||||||||||| |  | ||||||||||  ||||||||||    
T  13060506 acactctatttttttcaattcacacaatattagatcaaagtataattacttggggtttaatcttccaatttatttttcaacatcacactaatgttccaa 13060604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 33462510 - 33462317
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||  |||||||||||||| |||  |||||||  |||||||  ||||| || |    
T  33462510 ataataattactattatttttatcattatcaagtatttaaaattaaacactgcaatttaaacactactaa--tgtgtgtcttatttta-ttgggacctcc 33462414  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||| ||| | ||||||  | ||||||||| || ||||| |||  ||||||||||    
T  33462413 acactctattttttcaattcacacaacattagatcaaa-tataattatttggtgtttaattattcaatttttcttcgaacattacactaatgttccaa 33462317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 12875344 - 12875507
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||| ||||||||| ||||||| | || ||| ||||| ||||||||||| |  ||| |  |    
T  12875344 ataataattactattatgtttatcattatcaaatatttaaaatcaaataccactatttaaatattactaatgtgtgggttctattttatgcaggaccccc 12875443  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttc 179  Q
    |||||||||||||||||||||||||||| || || ||||| || ||| ||| | ||||||||||    
T  12875444 acactctattttttcaattcacacaacactagatgaaagtctaattacttggtgtttaatcttc 12875507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 56 - 213
Target Start/End: Original strand, 19907269 - 19907425
Alignment:
Q  56 aattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagt 155  Q
    ||||||||||| |||||||||||||  ||| ||||||||||||||||| ||| || |  |||||| |||||||||||||||||||||| || |||||| |    
T  19907269 aattaaataccgcaatttaaacactgctaatgtgtgtgttctattttatgtgagaccc-cacactttattttttcaattcacacaacactagatcaaaat 19907367  T
Q  156 atagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||| ||| ||| | ||||||||| ||||||||| |||||||||||| |||||||||||    
T  19907368 ataattacttggtgtttaatctttcaatttttcttccaacatcacaccaatgttccaa 19907425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 24 - 177
Target Start/End: Original strand, 27183183 - 27183326
Alignment:
Q  24 tactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactcta 123  Q
    |||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||  |||||||||||||||| |||||| |  ||           
T  27183183 tactattatttttatcattatcaagtatttaaaattaaataccataatttaaacactactaa--tgtgtgttctattttatgtgggaccccca------- 27183273  T
Q  124 ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatct 177  Q
     |||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||    
T  27183274 -tttttcaattcacacaacattatatcaaagtataattacttggtatttaatct 27183326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 23094049 - 23094244
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||  |  ||||||| ||||| ||| ||||||||| ||||||| ||||   |  |    
T  23094049 ataataattactattatttttatcattatcaagtatttaaaattaaatctcgtaatttaatcactactaatgtgtgtgttttattttatgtgg--acccc 23094146  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    || |||||||||||||||||| |  ||||||  ||||| | || ||  ||| | ||||||||| ||||||||  || ||| |||||||||||||||||    
T  23094147 actctctattttttcaattcatatcacattagctcaaattctaattccttggtgtttaatctttcaattttttttctaacttcacatcaatgttccaa 23094244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 24 - 158
Target Start/End: Original strand, 40408896 - 40409026
Alignment:
Q  24 tactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactcta 123  Q
    |||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||||||  ||| |    | ||| |||    
T  40408896 tactattatttttaccat-atcaaatatttaaaattaaataccgcaatttaaacactaataatatgtgtgttctattttatttggta---ccccacacta 40408991  T
Q  124 ttttttcaattcacacaacattacatcaaagtata 158  Q
    |||||| |||||| ||||||||| |||||||||||    
T  40408992 tttttttaattcatacaacattagatcaaagtata 40409026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 48275992 - 48275829
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| ||||||||| |||||||| || ||||||||| |||||||||| |||||||||||  ||  ||||||||| |||||||  | ||| |  |    
T  48275992 ataataattattattattttcatcattattaagtatttaaaaataaataccactatttaaacactgcta--gtgtgtgttatattttatat-ggaccccc 48275896  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||||||||||||||||||||||||||||  | |||||||| || | | ||||| |||||||||||||    
T  48275895 acactctattttttcaattcacacaacacaagatcaaagtttaataacttgatgtttaatcttccaa 48275829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 28 - 182
Target Start/End: Complemental strand, 8028292 - 8028148
Alignment:
Q  28 attatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctatttt 127  Q
    ||||||||||||||||| |  ||||||||||||||||| || |||||||||||| ||| ||||||||||||||||| |      ||| ||||||||||||    
T  8028292 attatttttatcattattagttatttaaaattaaatacaactatttaaacactactaatgtgtgtgttctattttatg------ctt-acactctatttt 8028200  T
Q  128 ttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||||||||||||||||||  |||||||| || ||| |||   |||||||||||||    
T  8028199 ttcaattcacacaacattcgatcaaagtttaattacttg---tttaatcttccaa 8028148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 30 - 143
Target Start/End: Original strand, 12878856 - 12878968
Alignment:
Q  30 tatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctatttttt 129  Q
    |||||||||||||||||| |||||| ||| ||||| ||  |||||||||||| ||| |||| |||||||||||| |||||||| ||  ||||||||||||    
T  12878856 tatttttatcattatcaagtatttataat-aaatatcattatttaaacactattaatgtgtatgttctattttatgtgggatcctcttactctatttttt 12878954  T
Q  130 caattcacacaaca 143  Q
    ||||||||||||||    
T  12878955 caattcacacaaca 12878968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 29985138 - 29984998
Alignment:
Q  16 ataataattactattatttttatcattatcaaata-tttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    |||||||||||||| |||||||||||||||   || |  |||||||||||| ||| | ||||||||| |||  ||| || ||||||||||||||||  |     
T  29985138 ataataattactatcatttttatcattatcgggtactaaaaaattaaatacaacattgtaaacactactaatttgtttgctctattttacgtgggacatc 29985039  T
Q  115 cacactctattttttcaattcacacaacattacatcaaagt 155  Q
    ||||||||||||||||||||||||||||| ||| |||||||    
T  29985038 cacactctattttttcaattcacacaacactacctcaaagt 29984998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 16 - 96
Target Start/End: Original strand, 19907188 - 19907268
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttc 96  Q
    ||||||||| |||||||||||||||| ||||| |||||||||||||||||| |||||||||||||  ||| ||||||||||    
T  19907188 ataataatttctattatttttatcatcatcaagtatttaaaattaaataccgcaatttaaacactgctaatgtgtgtgttc 19907268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 19 - 141
Target Start/End: Original strand, 47245073 - 47245193
Alignment:
Q  19 ataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcaca 118  Q
    |||||||  |||||||| |||| |||||  |||||||||||||||| | | |||||||||||||||| |||||||||||||||||  | |||||  | ||    
T  47245073 ataattataattattttcatcaatatcagttatttaaaattaaatatcgctatttaaacactaataatgtgtgtgttctattttatttaggatc--ccca 47245170  T
Q  119 ctctattttttcaattcacacaa 141  Q
    | |||||||||||||||||||||    
T  47245171 cactattttttcaattcacacaa 47245193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 49 - 179
Target Start/End: Complemental strand, 8029454 - 8029328
Alignment:
Q  49 tatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattaca 148  Q
    |||||||||||||||||||| || ||||||||      ||||||||||||||||| |||||| |  ||||||||||||||||||||||||||| | || |    
T  8029454 tatttaaaattaaataccactatgtaaacactgt----gtgtgtgttctattttatgtgggacccccacactctattttttcaattcacacaatactaga 8029359  T
Q  149 tcaaagtatagttagttgatatttaatcttc 179  Q
    ||||||| || ||| ||| | ||||||||||    
T  8029358 tcaaagtttaattacttggtgtttaatcttc 8029328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 201
Target Start/End: Original strand, 6943820 - 6943887
Alignment:
Q  134 tcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcaca 201  Q
    |||||||||| || ||||||||||| ||| ||||| ||||||||||||||||||| ||||||||||||    
T  6943820 tcacacaacagtaaatcaaagtataattacttgatgtttaatcttccaatttttcttccaacatcaca 6943887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 32 - 110
Target Start/End: Original strand, 6943740 - 6943818
Alignment:
Q  32 tttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtggga 110  Q
    |||||||||||||||| ||||| |||||||||||  ||||||||||| || ||| || |||||||||||||| ||||||    
T  6943740 tttttatcattatcaagtatttgaaattaaatacagcaatttaaacattactaatgtatgtgttctattttatgtggga 6943818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 101
Target Start/End: Original strand, 16948941 - 16949026
Alignment:
Q  17 taataattactattatttt-tatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattt 101  Q
    |||||||||||||| |||| |||||||||||| |||| |||| ||||||| | ||||| ||||||| |||  ||||||||||||||    
T  16948941 taataattactattcttttttatcattatcaagtattcaaaactaaatacaagaatttgaacactactaatatgtgtgttctattt 16949026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 16 - 59
Target Start/End: Complemental strand, 39216229 - 39216186
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaatt 59  Q
    ||||||||||| ||||||||||||||||||||||||| ||||||    
T  39216229 ataataattacgattatttttatcattatcaaatattaaaaatt 39216186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 16958263 - 16958305
Alignment:
Q  33 ttttatcattatcaaatatttaaaattaaataccacaatttaa 75  Q
    |||||||||||| || ||||||||||||||||| |||||||||    
T  16958263 ttttatcattatgaagtatttaaaattaaatacaacaatttaa 16958305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 28601575 - 28601617
Alignment:
Q  22 attactattatttttatcattatcaaatatttaaaattaaata 64  Q
    |||| |||||||||||||||||  |||||||||||||||||||    
T  28601575 attattattatttttatcattactaaatatttaaaattaaata 28601617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 88 - 180
Target Start/End: Original strand, 28601630 - 28601725
Alignment:
Q  88 tgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaag---tatagttagttgatatttaatcttcc 180  Q
    |||||||||||||||| |||||| |  |||| |||||||||| |||||||||  || || |||||||   |||  ||| |||||||||||||||||    
T  28601630 tgtgtgttctattttatgtgggacccccacattctatttttttaattcacaccgcactagatcaaagttttattattacttgatatttaatcttcc 28601725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 5e-80; HSPs: 22)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 10136256 - 10136462
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  10136256 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 10136355  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||    
T  10136356 gggacccccacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaat 10136455  T
Q  207 gttccaa 213  Q
    |||||||    
T  10136456 gttccaa 10136462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 25844696 - 25844893
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||| |  |    
T  25844696 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 25844795  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  25844796 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 25844893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 26926885 - 26926688
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaa-ttaaataccacaatttaaa-cactaataacgtgtgtgttctattttac 104  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||| ||||| ||| |||||||||||||||||     
T  26926885 tcgaataaaataataattactattatttttatcattatcaagtatttaaaaattaaataccacaatttaaaacactactaatgtgtgtgttctattttat 26926786  T
Q  105 gtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatca 204  Q
    ||||||||    ||||        |||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||    
T  26926785 gtgggatcc---cact--------tcaattcacacaacattaaatcaaagtataattagttggtgtttaatcttccaatttttcatccaacatcacatca 26926697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 16648786 - 16648591
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| |  |    
T  16648786 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 16648687  T
Q  116 -acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
     ||||||||||||||||||| ||||||||||| ||||||||||| |||  ||   |||||||||| ||||| |  ||||| ||||||  ||||||||||    
T  16648686 tacactctattttttcaatttacacaacattagatcaaagtataattacgtg---tttaatcttctaatttattttccaaaatcacactaatgttccaa 16648591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 7 - 158
Target Start/End: Complemental strand, 51040686 - 51040535
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||||||||||||| | ||    
T  51040686 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataacacaatttaaacactactaatgtgtgtgttctatttcatgt 51040587  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtata 158  Q
    ||||    |||||| ||||||||||||||||||||||||| |||||||||||    
T  51040586 gggactcccacactttattttttcaattcacacaacattagatcaaagtata 51040535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 16036546 - 16036712
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||| | ||||||||| ||||||||||  |||||||| ||||||||||| |||||||||||| ||| ||||||||||||||||| |||||| || |    
T  16036546 ataataataattattattttcatcattatcaggtatttaaatttaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 16036645  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    |||||||||||||||||||||||||||| || |||||||| |||||| ||| | |||||||||||||    
T  16036646 acactctattttttcaattcacacaacactagatcaaagtttagttacttggtgtttaatcttccaa 16036712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 22 - 185
Target Start/End: Original strand, 38622135 - 38622298
Alignment:
Q  22 attactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactc 121  Q
    |||||||||||||||||||||||||| |||| ||||| ||||||  || ||||||||||| |||  |||| ||||||||||| ||||||    |||||||    
T  38622135 attactattatttttatcattatcaagtattcaaaatcaaatactgcattttaaacactactaatatgtgagttctattttatgtgggactcccacactc 38622234  T
Q  122 tattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaattt 185  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||    
T  38622235 tattttttcaattcacacaacattagatcaaagtataattacttgatttttaatcttccaattt 38622298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 143
Target Start/End: Original strand, 11807159 - 11807286
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| |||| |||||||||||||||| |||||||| |||||||||||||||||||||||  ||| ||||||||||||||||| |||| |||| |    
T  11807159 ataataattaatattgtttttatcattatcaagtatttaaatttaaataccacaatttaaacactgctaatgtgtgtgttctattttatgtggaatctcc 11807258  T
Q  116 acactctattttttcaattcacacaaca 143  Q
     |||||||||||||||||||||||||||    
T  11807259 gcactctattttttcaattcacacaaca 11807286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 23191993 - 23191829
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||| | ||||||||||||||||||||  |||||||||||||||||||| | |||||||||| ||| |||||||||||||||||  || || |  |    
T  23191993 ataataataattattatttttatcattatcaggtatttaaaattaaataccactacttaaacactactaatgtgtgtgttctatttta--tgtgaccccc 23191896  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    |||||||||||||||||||||||||||| || |||||||| || | | ||| | |||||||||||||    
T  23191895 acactctattttttcaattcacacaacactagatcaaagtttaataacttggtgtttaatcttccaa 23191829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 16 - 129
Target Start/End: Original strand, 12260916 - 12261028
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||| ||| | ||||||||||||||| |||||| |  |    
T  12260916 ataataattactattatttttatcattatcaagtatttaaaattaaataccactatttaaacactactaatgagtgtgttctattttatgtggga-cccc 12261014  T
Q  116 acactctatttttt 129  Q
    ||||||||||||||    
T  12261015 acactctatttttt 12261028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 19798151 - 19797984
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtggga-tctt 114  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |||  || | ||||||||||| ||||||  |      
T  19798151 ataattattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatgcgagttctattttatgtgggaccccc 19798052  T
Q  115 cacactcta-ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    |||||| || ||||||||||||||||||||||| |||||| |||| ||| ||| |||||||| ||||||    
T  19798051 cacactttatttttttcaattcacacaacattagatcaaa-tataattacttggtatttaattttccaa 19797984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 16 - 178
Target Start/End: Complemental strand, 39586234 - 39586076
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| ||||||||||||||||||||  |||||||||||||||| ||| ||||||||| || |||  ||| |||||||||||| |||||| || |    
T  39586234 ataataattattattatttttatcattatcaggtatttaaaattaaatatcactatttaaaca-tattaa--tgtttgttctattttatgtgggacctcc 39586138  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatctt 178  Q
    ||||||||||||||||||| |||||| | || |||||||| || | | ||||| |||||||||    
T  39586137 acactctattttttcaatt-acacaatactatatcaaagtttaataacttgatctttaatctt 39586076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 10141024 - 10141098
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacacta 81  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  10141024 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacacta 10141098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 27 - 182
Target Start/End: Original strand, 40166891 - 40167046
Alignment:
Q  27 tattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattt 126  Q
    ||||||||||||||||||||  ||||||||||||||||||||  ||||||||||| | | |||||| ||||||||||  ||||| |   ||| |||||||    
T  40166891 tattatttttatcattatcaggtatttaaaattaaataccactgtttaaacactactgatgtgtgtcttctattttatttgggacccctacattctattt 40166990  T
Q  127 tttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||||||||||||||| | || |||||||| || | | ||| | |||||||||||||    
T  40166991 tttcaattcacacaatactagatcaaagtttaataacttggtgtttaatcttccaa 40167046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 118 - 213
Target Start/End: Original strand, 8138634 - 8138726
Alignment:
Q  118 actctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||| ||   |||||||||||||||||||| ||||| ||||||||||||||||||    
T  8138634 actctattttttcaattcacacaatattatatcaaagtataattactt---atttaatcttccaatttttcttccaagatcacatcaatgttccaa 8138726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 134
Target Start/End: Complemental strand, 39199917 - 39199805
Alignment:
Q  26 ctattatttttatcattatcaaatatttaaaattaaataccacaatttaaacac----taataacgtgtgtgttctattttacgtgggatcttcacactc 121  Q
    ||||||||||||||||||| || ||||||||| |||||||  ||||||||||||    || ||| ||||||||||||||||| |||||| || |||||||    
T  39199917 ctattatttttatcattattaagtatttaaaagtaaatactgcaatttaaacacacactattaatgtgtgtgttctattttatgtgggacctccacactc 39199818  T
Q  122 tattttttcaatt 134  Q
    |||||||||||||    
T  39199817 tattttttcaatt 39199805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 47450349 - 47450284
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacacta 81  Q
    |||||||| | ||||||||||||||||||||| |||||||||||||||| | || |||||||||||    
T  47450349 ataataataattattatttttatcattatcaagtatttaaaattaaataacgcagtttaaacacta 47450284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 33300417 - 33300379
Alignment:
Q  16 ataataattactattatttttatcattatcaaatattta 54  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  33300417 ataataattactattatttttatcattatcaagtattta 33300379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 70 - 155
Target Start/End: Original strand, 46697309 - 46697392
Alignment:
Q  70 atttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagt 155  Q
    ||||||||| || ||| || |||||| ||||||| |||||| |  || |||||||||||||||||||||||||| || ||||||||    
T  46697309 atttaaacattactaatgtatgtgttatattttatgtgggacc--catactctattttttcaattcacacaacactaaatcaaagt 46697392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 56
Target Start/End: Original strand, 46697275 - 46697315
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaa 56  Q
    ||||||||||||||||||||||||||| |||| ||||||||    
T  46697275 ataataattactattatttttatcattttcaagtatttaaa 46697315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 126 - 201
Target Start/End: Complemental strand, 5100220 - 5100146
Alignment:
Q  126 ttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcaca 201  Q
    ||||||||||||| ||||||| || |||||||| ||| ||| | |||||||||||||||| |  ||||||||||||    
T  5100220 ttttcaattcacataacattagattaaagtataattacttg-tgtttaatcttccaatttattttccaacatcaca 5100146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 39199778 - 39199735
Alignment:
Q  170 tttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||| ||| |||||||| |||||||||||    
T  39199778 tttaatcttccaatttttcttcccacatcacaccaatgttccaa 39199735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 18472937 - 18473143
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  18472937 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 18473036  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||  | |||||||||||||||||||||||||||||||||||||    
T  18473037 gggacccccacactctattttttcaattcacacaacattagatcaaagtataattactttgtgtttaatcttccaatttttcatccaacatcacatcaat 18473136  T
Q  207 gttccaa 213  Q
    |||||||    
T  18473137 gttccaa 18473143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 23660645 - 23660448
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||| |||||| || |    
T  23660645 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttttattttatgtgggagctcc 23660546  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  23660545 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 23660448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 23665277 - 23665080
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||  ||||| || |    
T  23665277 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatatgggagctcc 23665178  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  23665177 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 23665080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 757519 - 757323
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||| || |  |    
T  757519 ataataattactattatttttatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagaccccc 757421  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  757420 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 757323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 7570380 - 7570174
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||||||||||| |     
T  7570380 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttatgc 7570281  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||| |||    
T  7570280 gggacccccacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacattaat 7570181  T
Q  207 gttccaa 213  Q
    |||||||    
T  7570180 gttccaa 7570174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 14437846 - 14437652
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||| || || |    
T  14437846 ataataattattattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgagacctcc 14437747  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||||||||||||||||||||   | ||||||||||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  14437746 acactctattttttcaattcacacaac---agatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 14437652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 20520901 - 20521098
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||||||| |||||||||||||| ||| |||||| |||||||||| |||||| |  |    
T  20520901 ataataattactattatttttatcattatcaagtatttaaagttaaataccgcaatttaaacactactaatgtgtgtattctattttatgtgggaccccc 20521000  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  20521001 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcttccaacatcacactaatgttccaa 20521098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 18468152 - 18468349
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| ||  || |  |    
T  18468152 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatattatgt-agaccccc 18468250  T
Q  116 acactcta-ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||| ||||||||||||||||||||||| |||||| |||| ||| ||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  18468251 acactctatttttttcaattcacacaacattagatcaaactataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 18468349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 55326708 - 55326899
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || ||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  55326708 tcgaataaaataataactactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 55326807  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatca 199  Q
    |||| |  |||||| ||||||||||||||||||||||||| |||||| |||| ||| ||| | ||||||||||||||||||||||||||||||    
T  55326808 gggacccccacactatattttttcaattcacacaacattagatcaaa-tataattacttggtgtttaatcttccaatttttcatccaacatca 55326899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 27709862 - 27710065
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||  || |||||||||||| ||    
T  27709862 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaac--gtatgttctattttatgt 27709959  T
Q  107 gggatcttcacactctattttttcaattcacacaacatt-acatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaa 205  Q
    |||| |  ||||||||||||||||||||||||||||||| | |||||||||||  || ||| | ||||||||||||||||||||| ||||||||||||||    
T  27709960 ggga-ccccacactctattttttcaattcacacaacattaaaatcaaagtata-atacttggtgtttaatcttccaatttttcattcaacatcacatcaa 27710057  T
Q  206 tgttccaa 213  Q
    ||||||||    
T  27710058 tgttccaa 27710065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 12970966 - 12970767
Alignment:
Q  16 ataataattactattattttt-atcattatcaaatattt-aaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatct 113  Q
    ||||||||||||||||||||| ||||||||| | ||||| ||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||     
T  12970966 ataataattactattattttttatcattatccagtattttaaaattaaataccgcaatttaaacactactaaagtgtgtgttctattttatgtgggatca 12970867  T
Q  114 tcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
     |||||| ||||||||||||||||||||||||| ||||| ||||| ||| ||| | ||||||||||| |||||||||||||||||| |||||||||||||    
T  12970866 ccacactttattttttcaattcacacaacattaaatcaacgtataattacttggtgtttaatcttccgatttttcatccaacatcatatcaatgttccaa 12970767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 46964953 - 46965149
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||| |||| ||||||||||||||||||||| |||||||||||||||||| || ||||||||||| ||| ||||| ||||||||||| |||||  | ||    
T  46964953 ataattattattattatttttatcattatcaagtatttaaaattaaataccgcagtttaaacacta-taatgtgtgagttctattttatgtggggccctc 46965051  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |  |||||||| |||  ||||||||||    
T  46965052 acactctattttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacattacactaatgttccaa 46965149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 197
Target Start/End: Complemental strand, 12965040 - 12964857
Alignment:
Q  16 ataataattactattatttttatcattatcaaata-tttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||| ||| || |||||| ||||||| |||||| |      
T  12965040 ataataattactattatttttatcattatcaaatattttaaaattaaataccgcaatttaaacactactaaagtttgtgtt-tattttatgtgggaccac 12964942  T
Q  115 cacactcta-ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatc-ttccaatttttcatccaacat 197  Q
    ||||||||| |||||||||||||  |||||||| ||||||||||| ||| ||| | ||||||| ||| |||||||||||||||||    
T  12964941 cacactctatttttttcaattcatgcaacattaaatcaaagtataattacttggtgtttaatcattctaatttttcatccaacat 12964857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 29351167 - 29351334
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| ||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||| ||||||||| ||||||| |||||| || |    
T  29351167 ataataattattattattttcatcattatcagatatttaaaattaaataccactatttaaacactaataatgtgtgtgttttattttatgtgggacctcc 29351266  T
Q  116 acactcta-ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    || || || |||||||||||||||||||| |  |||||||| || | | ||| | |||||||||||||    
T  29351267 acgctttatttttttcaattcacacaacactggatcaaagtttaataaattggtgtttaatcttccaa 29351334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 55432167 - 55432330
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| ||| |||||||||||||||||||||||||||||||||||  |||||||||||||| |||  |||||||||||||||  |||||| |  |    
T  55432167 ataataattaatataatttttatcattatcaaatatttaaaattaaatactgcaatttaaacactactaa--tgtgtgttctattttgtgtgggaccccc 55432264  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||||| ||||||||||||||||||| ||||| |||||| |||| ||| ||| | |||||||||||||    
T  55432265 acactttattttttcaattcacacagcattagatcaaa-tataattacttggtgtttaatcttccaa 55432330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 3656413 - 3656247
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||| | ||||||||| ||||||||||  |||||||||||||||||||| |||||||||||| ||| ||  ||||||||||||| |||||| |       
T  3656413 ataataataattattattttcatcattatcaggtatttaaaattaaataccactatttaaacactactaatgtccgtgttctattttatgtgggacccct 3656314  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||| |||||||||||||||||||||||| || |||||||| || ||| ||| | |||||||||||||    
T  3656313 acattctattttttcaattcacacaacactaaatcaaagtttaattacttggtgtttaatcttccaa 3656247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 103
Target Start/End: Complemental strand, 39774990 - 39774894
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctatttta 103  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  ||||||||||||||||    
T  39774990 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctatttta 39774894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 7860646 - 7860767
Alignment:
Q  16 ataataattactattattttt-atcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatct 113  Q
    ||||||| ||||||| ||||| |||||||| | |||||||||| |||||||||| ||||||||||||| ||| ||||||||||||||||| |||||| ||    
T  7860646 ataataaatactatttttttttatcattataagatatttaaaaattaaataccataatttaaacactattaatgtgtgtgttctattttatgtgggacct 7860745  T
Q  114 tcacactctattttttcaattc 135  Q
     |||||||||||||||||||||    
T  7860746 ccacactctattttttcaattc 7860767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 51 - 213
Target Start/End: Original strand, 20175368 - 20175527
Alignment:
Q  51 tttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatc 150  Q
    |||||||||||||||  ||||||||| |||| |||  |||||||||||||||| |||| | |  |||||||||||||||||||| ||||||||||| |||    
T  20175368 tttaaaattaaatactgcaatttaaatactactaa--tgtgtgttctattttatgtggaaccc-cacactctattttttcaattaacacaacattagatc 20175464  T
Q  151 aaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||| ||| ||| | ||||||||| |||||| |  ||||||||||||  ||||||||||    
T  20175465 aaagtataattacttggtgtttaatctttcaatttattttccaacatcacactaatgttccaa 20175527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 131 - 210
Target Start/End: Complemental strand, 32473185 - 32473106
Alignment:
Q  131 aattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttc 210  Q
    |||||||||||||||| ||||||||||| ||| ||| | ||||||||||||||||||||||||| |||||||||||||||    
T  32473185 aattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaatatcacatcaatgttc 32473106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 12111741 - 12111608
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||  |||||||||    || ||| ||||||||||||||| ||| || |  |    
T  12111741 ataataattactattatttttatcattatcaagcatttaaaattaaataccgaaatttaaac----attacg-gtgtgttctattttatgtgagacc--c 12111649  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtata 158  Q
    ||||| || ||||||||||||||||||  || |||||||||||    
T  12111648 acactttactttttcaattcacacaac--tatatcaaagtata 12111608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 50 - 213
Target Start/End: Original strand, 3426047 - 3426207
Alignment:
Q  50 atttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacat 149  Q
    |||||||||| |||||| || ||||||||||| ||| ||||| ||||||||||| |||| | |  |||| ||||||||   |||||||||||||| | ||    
T  3426047 atttaaaattgaataccgcagtttaaacactactaatgtgtgagttctattttatgtggtacccccacattctatttt---aattcacacaacataagat 3426143  T
Q  150 caaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
     |||||||| ||| ||| | |||||||||  ||||| |  ||||||||||||  ||||||||||    
T  3426144 taaagtataattacttggtgtttaatctttaaatttattttccaacatcacactaatgttccaa 3426207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 29 - 143
Target Start/End: Complemental strand, 2206970 - 2206859
Alignment:
Q  29 ttatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactcta-tttt 127  Q
    ||||||| |||||||||| |||| |||||||||||||  | |||||||||||| | |    |||||||||||||| |||||  |  ||||||||| ||||    
T  2206970 ttattttcatcattatcagatatgtaaaattaaatactgctatttaaacactactga----tgtgttctattttatgtgggtcccccacactctattttt 2206875  T
Q  128 ttcaattcacacaaca 143  Q
    ||||||| ||||||||    
T  2206874 ttcaatttacacaaca 2206859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 12565291 - 12565161
Alignment:
Q  16 ataataattactattattttt---atcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggat 111  Q
    |||||||||||||||||||||   ||||||||||  ||||||||| || |||| || |||||||| |||| ||| || | |||| |||||||  |||||     
T  12565291 ataataattactattattttttttatcattatcaggtatttaaaaattgaatatcataatttaaaaactactaatgtatatgttatattttatatgggac 12565192  T
Q  112 cttcacactctatt---ttttcaattcacac 139  Q
    | ||||||||||||   ||||||||||||||    
T  12565191 cctcacactctattttattttcaattcacac 12565161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 143
Target Start/End: Complemental strand, 13149806 - 13149714
Alignment:
Q  54 aaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctatt---ttttcaattcacacaaca 143  Q
    |||||| ||||||| ||||||||||||| | | || | | ||||||||||  ||||||| ||||||||||||   ||||||||||||||||||    
T  13149806 aaaattgaataccataatttaaacactacttatgtatatattctattttatatgggatcctcacactctattttattttcaattcacacaaca 13149714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 139
Target Start/End: Complemental strand, 13259690 - 13259560
Alignment:
Q  16 ataataattactattattttt---atcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggat 111  Q
    |||||||||||||||||||||   ||||||||||  ||||||||| || |||| || |||||||| |||| ||| || | |||| |||||||  |||||     
T  13259690 ataataattactattattttttttatcattatcaggtatttaaaaattgaatatcataatttaaaaactactaatgtatatgttatattttatatgggac 13259591  T
Q  112 cttcacactctatt---ttttcaattcacac 139  Q
    | ||||||||||||   ||||||||||||||    
T  13259590 cctcacactctattttattttcaattcacac 13259560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 96 - 182
Target Start/End: Original strand, 38891137 - 38891222
Alignment:
Q  96 ctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    |||||||| |||||| || |||||| ||||||||||||||||| ||||||| |||||||| || ||| | | | |||||||||||||    
T  38891137 ctattttatgtgggacct-cacactatattttttcaattcacaaaacattagatcaaagtttaattactcggtgtttaatcttccaa 38891222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 32 - 139
Target Start/End: Complemental strand, 37834211 - 37834103
Alignment:
Q  32 tttttatcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttc 130  Q
    ||||||||||| |  ||||||||||| ||||| |||  ||| ||||||||| |||  ||  ||||||| ||||  || |||  |||||||||||||||||    
T  37834211 tttttatcattgtacaatatttaaaacttaaacaccttaatataaacactattaatatgcatgttctagtttatatgagattctcacactctattttttc 37834112  T
Q  131 aattcacac 139  Q
    |||||||||    
T  37834111 aattcacac 37834103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 144; Significance: 8e-76; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 7 - 210
Target Start/End: Complemental strand, 17963723 - 17963520
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  17963723 tcgaataaaataacaattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 17963624  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||| ||||| ||||||||||||||| ||| | |||||||||||||||||||||||||||||||||||||    
T  17963623 gggacccccacactctattttttcaattcacacatcattagatcaaagtatagttacttggtgtttaatcttccaatttttcatccaacatcacatcaat 17963524  T
Q  207 gttc 210  Q
    ||||    
T  17963523 gttc 17963520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 16835318 - 16835120
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| |  |    
T  16835318 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 16835219  T
Q  116 acactctatt-ttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||| |||| |||||||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  16835218 acactctattttttttaattcacacaacattagatcaaagtatatttacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 16835120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 119; E-Value: 6e-61
Query Start/End: Original strand, 7 - 209
Target Start/End: Complemental strand, 6407025 - 6406824
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |     
T  6407025 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgc 6406926  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
     ||| |  ||||||||||||||||||||||||||||| || ||||||||||| ||| ||| | ||||||||| ||||||||||||||||| || ||||||    
T  6406925 aggacccccacactctattttttcaattcacacaacaatagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacagca-atcaat 6406827  T
Q  207 gtt 209  Q
    |||    
T  6406826 gtt 6406824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 12405516 - 12405334
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||||| ||||| ||| |||||||||||||||||  || ||||| |    
T  12405516 ataataattactattatttttatcattatcaagtatttaaaattaagtacctcaatttaatcactactaatgtgtgtgttctattttatttgtgatctcc 12405417  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatc 198  Q
    |||||||||||||| |||| ||||||||||| |||||| |||| ||||||||| ||||||||||||||||||| |||||||||    
T  12405416 acactctatttttttaattaacacaacattagatcaaaatataattagttgatgtttaatcttccaatttttcttccaacatc 12405334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 20747453 - 20747253
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||||| ||| ||||  ||||||||||| || ||| |  |    
T  20747453 ataataattactattgtttttatcgttatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtaagttctattttatgtaggaccccc 20747354  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaaga 215  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||| | || ||| | ||| |||||||||||||    
T  20747353 acactctattttttcaattcacacaacattaaatcaaagtataattacttgatgtttaatcttccaattttccttcaaacttaacaccaatgttccaaga 20747254  T
Q  216 g 216  Q
    |    
T  20747253 g 20747253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 24 - 196
Target Start/End: Original strand, 17600328 - 17600497
Alignment:
Q  24 tactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactcta 123  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||   || |||||||||||||| |||||| | ||||||||||    
T  17600328 tactgttatttttatcattatcaattatttaaaattaaataccacaatttaaacactaat---gtttgtgttctattttatgtgggaccctcacactcta 17600424  T
Q  124 ttttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaaca 196  Q
    ||||||||||||||||||||||| ||||||||||  ||| ||| | ||||||||||||||||||| |||||||    
T  17600425 ttttttcaattcacacaacattagatcaaagtatgattacttggtgtttaatcttccaatttttcttccaaca 17600497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 19994540 - 19994344
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||| ||||| |||||||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||| |  |    
T  19994540 ataataattactattatttttatcataatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttacgtgggaccccc 19994441  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||||||| |||||||| ||||||  || |||||||| |||  |  | ||||||||||||||||||| |||||||||||| ||||| |||||    
T  19994440 acactctatttttt-aattcacataacattcgattaaagtataattacctagtgtttaatcttccaatttttcttccaacatcacaccaatgatccaa 19994344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 11533857 - 11533661
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||  || ||||||||||||||||| |||||| |  |    
T  11533857 ataataattacaattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgtgttctattttatgtggga-cccc 11533759  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||| ||||||||||||||||||||||||| |||||| |||| ||| ||| | |||||||||| ||||| |  ||||||||||||  ||||||||||    
T  11533758 acactttattttttcaattcacacaacattagatcaaactataattacttggtgtttaatcttctaatttattctccaacatcacactaatgttccaa 11533661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 11559367 - 11559171
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||||||| ||||||||||||||  || ||||||||||||||||| |||||| |  |    
T  11559367 ataataattacaattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactaccaatgtgtgtgttctattttatgtggga-cccc 11559269  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||| ||||||||||||||||||||||||| |||||| |||| ||| ||| | |||||||||| ||||| |  ||||||||||||  ||||||||||    
T  11559268 acactgtattttttcaattcacacaacattagatcaaactataattacttggtgtttaatcttctaatttattctccaacatcacactaatgttccaa 11559171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 11569847 - 11569679
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||   || ||||||||||||||||| |||||| |  |    
T  11569847 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacacttccaatgtgtgtgttctattttatgtggga-cccc 11569749  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaattt 185  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||| |||||    
T  11569748 acactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttctaattt 11569679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 210
Target Start/End: Complemental strand, 33686799 - 33686606
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||| ||| ||||||||| ||||||||||| ||||||||||| |||  |||  ||| ||||||| |||| | |  |    
T  33686799 ataataattactattatttttatcattaccaagtatttaaaactaaataccacagtttaaacactactaatttgtaagttttattttatgtggaaccc-c 33686701  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttc 210  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||| ||||| |||||||||||||||| |  ||||||||||||| |||||||    
T  33686700 acactctattttttcaattcacacaaaattagatcaaagtataattatttgatgtttaatcttccaatttattttccaacatcacattaatgttc 33686606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 16 - 199
Target Start/End: Complemental strand, 2699271 - 2699087
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||| |||||| | |||||||||||||||||| |||||||||||||| ||| |||||  |||||||||| |||||| |  |    
T  2699271 ataataattactattatttttattattatctagtatttaaaattaaataccgcaatttaaacactactaatgtgtgaattctattttatgtgggaccccc 2699172  T
Q  116 acactctat-tttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatca 199  Q
    ||||||||| |||| | ||||||||||||||| || |||||||| ||| ||||| |||||||||||||||| |  ||||||||||    
T  2699171 acactctatattttaccattcacacaacattagattaaagtataattacttgatgtttaatcttccaatttattttccaacatca 2699087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 20 - 213
Target Start/End: Complemental strand, 11613055 - 11612863
Alignment:
Q  20 taattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacac 119  Q
    |||| ||||||||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||| ||||||||| ||||||| |||||| ||  ||||    
T  11613055 taatcactattatttttatcattatcaagtatttaaaattaaataccgaaatttaaacactactaatgtgtgtgttttattttatgtgggacctcaacac 11612956  T
Q  120 tctattttttcaattcacacaacattacatc--aaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||| | | ||||||| |||  |||||||| ||| || || |||||| || ||||||| | |||||||||||  |||||||||||    
T  11612955 tctattttttcaatttatataacattagatcaaaaagtataattactt-atgtttaatttttcaattttccttccaacatcac--caatgttccaa 11612863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 18 - 155
Target Start/End: Original strand, 12689911 - 12690047
Alignment:
Q  18 aataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcac 117  Q
    |||||||| ||||||||| |||| |||||  |||||||||||||||||| | |||||||||||| ||| ||||||||||||||||| |||||| || |||    
T  12689911 aataattattattattttcatcaatatcagttatttaaaattaaataccgctatttaaacactactaatgtgtgtgttctattttatgtggga-ctccac 12690009  T
Q  118 actctattttttcaattcacacaacattacatcaaagt 155  Q
    |||||||||||||||||||||||||| || ||||||||    
T  12690010 actctattttttcaattcacacaacactagatcaaagt 12690047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 38 - 210
Target Start/End: Complemental strand, 22694517 - 22694347
Alignment:
Q  38 tcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcac 137  Q
    |||||||||| | |||| ||||||||||  |||||||||||||    | ||||||||||||||||| |||||| || || |||  |||||||||||||||    
T  22694517 tcattatcaagtttttataattaaatacggcaatttaaacactctagatgtgtgtgttctattttatgtgggacctccaaact--attttttcaattcac 22694420  T
Q  138 acaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttc 210  Q
    ||||||||| ||||||||||| ||| ||| | ||||||||||||||||||| |||||||||||| ||||||||    
T  22694419 acaacattagatcaaagtataattacttggtgtttaatcttccaatttttcttccaacatcacaccaatgttc 22694347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 25313631 - 25313487
Alignment:
Q  16 ataataattactattattttt--atcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatct 113  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||| |||  | |||||||||||||| ||| || |     
T  25313631 ataataattactattatttttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatatgtgttctattttatgtgtgaccc 25313532  T
Q  114 tcacactctattttttcaattcacacaacattacatcaaagtata 158  Q
     |||||||||||||||||||||| | ||||||| |||||||||||    
T  25313531 gcacactctattttttcaattcataaaacattatatcaaagtata 25313487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 158
Target Start/End: Complemental strand, 26201125 - 26200981
Alignment:
Q  16 ataataattactattattttt--atcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatct 113  Q
    |||||||||||||||||||||  ||||||||||| |||||||||||||||||| |||||||||||||| |||  | |||||||||||||| ||| || |     
T  26201125 ataataattactattatttttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatatgtgttctattttatgtgtgaccc 26201026  T
Q  114 tcacactctattttttcaattcacacaacattacatcaaagtata 158  Q
     |||||||||||||||||||||| | ||||||| |||||||||||    
T  26201025 gcacactctattttttcaattcataaaacattatatcaaagtata 26200981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 16 - 179
Target Start/End: Original strand, 22610451 - 22610612
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||| |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||| ||||||||| ||||||| |||| |    |    
T  22610451 ataataattacaattatttttatcattatcaagtatttaaaattaaataccaaaatttaaacactactaatgtgtgtgttttattttatgtggaactgcc 22610550  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttc 179  Q
    ||| ||||||||||||||  |||||||| || |||||||| || ||| ||| ||||||||||||    
T  22610551 acaatctattttttcaat--acacaacaatagatcaaagtctaattacttggtatttaatcttc 22610612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 29 - 182
Target Start/End: Complemental strand, 12797929 - 12797772
Alignment:
Q  29 ttatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtg----ttctattttacgtgggatcttcacactctat 124  Q
    ||||||||||| || |||| |||||||||||||||||||| |||||||||||| ||  |||||||    |||||||||| |||||| |  ||||||||||    
T  12797929 ttatttttatcgttgtcaagtatttaaaattaaataccactatttaaacactactagtgtgtgtgtgttttctattttatgtgggacccacacactctat 12797830  T
Q  125 tttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||||||||||||||||||| || |||||||| || ||| ||| | |||||||||||||    
T  12797829 tttttcaattcacacaacactagatcaaagtctaattacttggtgtttaatcttccaa 12797772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 51 - 218
Target Start/End: Original strand, 11428933 - 11429099
Alignment:
Q  51 tttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatc 150  Q
    |||||||||||| ||| || |||||| ||||  || ||||||| ||||||| | |||||| |  ||||||||||||||||||||||| |||||||| |||    
T  11428933 tttaaaattaaa-accgcagtttaaatactacaaatgtgtgtgctctatttaatgtgggacccccacactctattttttcaattcacgcaacattagatc 11429031  T
Q  151 aaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaagagta 218  Q
    |||||||| |||  || | ||||||||||||||||||||||||| |  ||||||||||||||| ||||    
T  11429032 aaagtataattatctggtgtttaatcttccaatttttcatccaaaagtacatcaatgttccaatagta 11429099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 16 - 161
Target Start/End: Original strand, 17914532 - 17914678
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||| |||||||||||||||| ||||  ||||||||||||||||||  |||| |||||||| ||| |||||||||| |||||| || ||| ||      
T  17914532 ataataattgctattatttttatcatcatcaggtatttaaaattaaataccgtaattaaaacactattaatgtgtgtgttccattttatgtaggacctca 17914631  T
Q  116 acactcta-ttttttcaattcacacaacattacatcaaagtatagtt 161  Q
    |||||||| |||||| |||| ||||||||||| ||||||||||||||    
T  17914632 acactctattttttttaatttacacaacattagatcaaagtatagtt 17914678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 110
Target Start/End: Original strand, 5856925 - 5857019
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtggga 110  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| |||| ||||||| |||| ||||||    
T  5856925 ataacaattactattatttttatcattatcaattatttaaaattaaataccgcaatttaaacactactaatgtgtatgttctagtttatgtggga 5857019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 14509919 - 14509982
Alignment:
Q  18 aataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacacta 81  Q
    ||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||||||||    
T  14509919 aataattactattatttttattattattaagtatttaaaattaaataccacaatttaaacacta 14509982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 27 - 178
Target Start/End: Original strand, 19674724 - 19674874
Alignment:
Q  27 tattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattt 126  Q
    ||||||||| |||||||| |  |||||||||||||||| ||  |||||||||||| | | ||||||||||||||||| || ||| |  |||||| | |||    
T  19674724 tattattttcatcattattaggtatttaaaattaaatatcattatttaaacactactgatgtgtgtgttctattttatgtcggacccccacactat-ttt 19674822  T
Q  127 tttcaattcacacaacattacatcaaagtatagttagttgatatttaatctt 178  Q
    || |||||||||||||| || |||||||| || ||| ||| | |||||||||    
T  19674823 ttccaattcacacaacactagatcaaagtttaattatttggtgtttaatctt 19674874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 149 - 213
Target Start/End: Original strand, 5857033 - 5857096
Alignment:
Q  149 tcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||| ||| ||| | ||||||||||||||||||| ||||||||||||  ||||||||||    
T  5857033 tcaaagtataatta-ttggtgtttaatcttccaatttttcttccaacatcacactaatgttccaa 5857096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 144; Significance: 8e-76; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 17974516 - 17974310
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaa-tatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacg 105  Q
    ||||| || ||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |    
T  17974516 tcgaataaaataataattacaattatttttatcattatcaaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatg 17974417  T
Q  106 tgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaa 205  Q
    ||||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||    
T  17974416 tggga-caccacactctattttttcaattcacacaacattagatcaaagtataattatttgatgtttaatcttccaatttttcatccaacatcacatcaa 17974318  T
Q  206 tgttccaa 213  Q
    ||||||||    
T  17974317 tgttccaa 17974310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 17968120 - 17967923
Alignment:
Q  16 ataataattactattatttttatcattatcaaa-tatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  |||||||||||||||| |||||| |      
T  17968120 ataataattactattatttttatcattatcaaagtatttaaaattaaataccacaatttaaacactactaatatgtgtgttctattttatgtgggaccc- 17968022  T
Q  115 cacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||| |||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  17968021 cacactctatttttttaattcacacaacattagatcaaagtataattacttgatgtttaatcttccaatttttcatccaacatcacatcaatgttccaa 17967923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 139; E-Value: 8e-73
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 30651845 - 30652051
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |     
T  30651845 tcgaataaaataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgc 30651944  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| |||||||||||||||||||||||||||    
T  30651945 gggacccccacactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaat 30652044  T
Q  207 gttccaa 213  Q
    |||||||    
T  30652045 gttccaa 30652051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 19891670 - 19891466
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||    
T  19891670 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactaataa--tgtgtgttctattttatgt 19891573  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    ||||    |||| |||||||||||||||||||||| |||| ||||||||||| |||  || | |||||||||||||||||||||||||||||||||||||    
T  19891572 gggactcccacattctattttttcaattcacacaagattagatcaaagtataattacatggtgtttaatcttccaatttttcatccaacatcacatcaat 19891473  T
Q  207 gttccaa 213  Q
    |||||||    
T  19891472 gttccaa 19891466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 7 - 213
Target Start/End: Complemental strand, 9184583 - 9184376
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  9184583 tcgaataaaataataattactattatttttatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 9184485  T
Q  107 gggatcttcacactctatttttt--caattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatca 204  Q
    |||| |  |||||||||||||||  ||||||||||||||||| |||||||| || ||| ||| | |||||||||||||||||||||||||||||||||||    
T  9184484 gggacccccacactctattttttttcaattcacacaacattagatcaaagtttaattatttggtgtttaatcttccaatttttcatccaacatcacatca 9184385  T
Q  205 atgttccaa 213  Q
    |||||||||    
T  9184384 atgttccaa 9184376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 7 - 218
Target Start/End: Complemental strand, 9179892 - 9179680
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  9179892 tcgaataaaataataattactattatttttatcattatcaagtatttaaa-ttaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 9179794  T
Q  107 gggatcttcacactctatttttt--caattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatca 204  Q
    |||| |  |||||||||||||||  ||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||||||||||| ||||||||||    
T  9179793 gggacccccacactctattttttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaccatcacatca 9179694  T
Q  205 atgttccaagagta 218  Q
    || |||||| ||||    
T  9179693 atattccaacagta 9179680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 12797869 - 12798055
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatct-t 114  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| ||      
T  12797869 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 12797968  T
Q  115 cacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcaca 201  Q
    |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||||||||||||| ||||||||||||    
T  12797969 cacactctattttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttttcttccaacatcaca 12798055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 32 - 218
Target Start/End: Original strand, 18345372 - 18345558
Alignment:
Q  32 tttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttca 131  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||| |  ||||||||||||||| |    
T  18345372 tttttatcattattaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactctattttttta 18345471  T
Q  132 attcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaagagta 218  Q
    ||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  18345472 attcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttccaacagta 18345558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 29678618 - 29678803
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||       
T  29678618 ataataattactattatttttatcattatcaaatatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggatccct 29678717  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcaca 201  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||  ||  ||||||||||||||||||||| ||||||||||||    
T  29678718 acactctattttttcaattcacacaacattagatcaaaatataattccttagtatttaatcttccaatttttcttccaacatcaca 29678803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 25496540 - 25496355
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| || |    
T  25496540 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 25496441  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcaca 201  Q
    |||||||||||||||||||||||||| |||| ||||||||||| ||| ||| | |||||||||||||||| |  ||||||||||||    
T  25496440 acactctattttttcaattcacacaatattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacatcaca 25496355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 29 - 213
Target Start/End: Original strand, 19896903 - 19897085
Alignment:
Q  29 ttatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttt 128  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||  |||||||||||||||| |||||| |  ||| ||||||||||    
T  19896903 ttatttttatcattatcaaatatttaaaattaaataccgcaatttaaacactactaa--tgtgtgttctattttatgtgggacccccacgctctattttt 19897000  T
Q  129 tcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||||||||||| |||||| |||| ||| |||||||||||||||||| ||| || |||||||||| | |||||||||||    
T  19897001 tcaattcacacaacattatatcaaaatataattacttgatatttaatcttccattttctcttccaacatcataccaatgttccaa 19897085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 25477445 - 25477248
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||  || |  |    
T  25477445 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtaagaccacc 25477346  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||||||||||| ||||| |||||||||| ||||||||||| ||| ||||| |||||||||||||||| |  | ||||||||||  ||||||||||    
T  25477345 acactctatttttttaattcgcacaacattaaatcaaagtataattatttgatgtttaatcttccaatttatttttcaacatcacactaatgttccaa 25477248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 18 - 213
Target Start/End: Original strand, 12361191 - 12361382
Alignment:
Q  18 aataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcac 117  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||  ||||| |||||||||| |||| | |  |||    
T  12361191 aataattactattatttttatcattatcaattatttaaaattaaataccacaatttaaacactactaa--tgtgtcttctattttatgtggaacc--cac 12361286  T
Q  118 actctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    | ||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |  ||||||| ||||  ||||||||||    
T  12361287 attctattttttcaattcacacaacattagatcaaagtataattatttggtgtttaatcttccaatttattttccaacaccacactaatgttccaa 12361382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 42925830 - 42925666
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||| ||||||||| ||||||||||  |||||||||||||||| ||| |||||||||||| |||  ||||||||||||||||||||||| || |    
T  42925830 ataataattattattattttcatcattatcaggtatttaaaattaaatatcactatttaaacactactaa--tgtgtgttctattttacgtgggacctcc 42925733  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    |||||||||||||||||||||||||||| || |||||||| || ||| ||| | |||||||||||||    
T  42925732 acactctattttttcaattcacacaacactagatcaaagtttaattacttggtgtttaatcttccaa 42925666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 1934147 - 1933968
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||                  ||||||||||||||| |||||| || |    
T  1934147 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaa------------------gtgtgttctattttatgtgggacctcc 1934066  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
     |||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  1934065 ccactctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 1933968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 24537179 - 24536975
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||  | ||||||||||| ||| || |||||| ||||||| |||||| |  |    
T  24537179 ataataattactattatttttatcattatcaagtatttaaaattaaataccgtagtttaaacactactaatgtatgtgttatattttatgtgggaccccc 24537080  T
Q  116 acactctattttttcaattcacacaac-------attacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgt 208  Q
    |||||||||||||||||||||||||||       |||| ||||||| ||  ||| ||| | ||||||||||||||||||| |||||||| ||| ||||||    
T  24537079 acactctattttttcaattcacacaacattaaacattagatcaaagaatgattaattggtgtttaatcttccaatttttcttccaacataacaccaatgt 24536980  T
Q  209 tccaa 213  Q
    |||||    
T  24536979 tccaa 24536975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 31329017 - 31329168
Alignment:
Q  31 atttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttc 130  Q
    ||||| ||||||||||  |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| || ||||||||||||||||    
T  31329017 attttcatcattatcatgtatttaaaattaaataccactatttaaacactactaacgtgtttgttctattttacgtgggacctccacactctattttttc 31329116  T
Q  131 aattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||||||||||||| || |||||||| || | | ||| | |||||||||||||    
T  31329117 aattcacacaacactagatcaaagtttaataacttggtgtttaatcttccaa 31329168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 31335738 - 31335889
Alignment:
Q  31 atttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttc 130  Q
    ||||| ||||||||||  |||||||||||||||||||| |||||||||||| |||||||| ||||||||||||||||||| || ||||||||||||||||    
T  31335738 attttcatcattatcatgtatttaaaattaaataccactatttaaacactactaacgtgtttgttctattttacgtgggacctccacactctattttttc 31335837  T
Q  131 aattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||||||||||||| || |||||||| || | | ||| | |||||||||||||    
T  31335838 aattcacacaacactagatcaaagtttaataacttggtgtttaatcttccaa 31335889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 16 - 132
Target Start/End: Complemental strand, 40846738 - 40846622
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||| |||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||||||  |    
T  40846738 ataaaaattactattatttttattattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgtgggatcccc 40846639  T
Q  116 acactctattttttcaa 132  Q
    |||||||||||||||||    
T  40846638 acactctattttttcaa 40846622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 53 - 213
Target Start/End: Complemental strand, 20101769 - 20101609
Alignment:
Q  53 taaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaa 152  Q
    |||||||||||||   |||||||| |||| ||| |||| |||||||||||| |||| | |   ||||||||||||||||||||||||||||||| |||||    
T  20101769 taaaattaaatacagtaatttaaatactactaatgtgtatgttctattttatgtggaaccccgacactctattttttcaattcacacaacattagatcaa 20101670  T
Q  153 agtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||| ||| ||| | ||||||||||||||||||| |||||||||||| |||| ||||||    
T  20101669 agtataattacttggtgtttaatcttccaatttttcttccaacatcacaccaattttccaa 20101609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 34495262 - 34495141
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||| ||||||||||||||||||||||| |||||||||||||||||  ||||||||||||||||||  |||||||| ||| ||||||| ||| |||    
T  34495262 ataataatgactattatttttatcattatcaagtatttaaaattaaatactgcaatttaaacactaataatatgtgtgttatatcttacgtgagat-ttc 34495164  T
Q  116 acactctattttttcaattcaca 138  Q
     |||||||||||||| |||||||    
T  34495163 tcactctattttttcgattcaca 34495141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 16 - 182
Target Start/End: Original strand, 28604026 - 28604191
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||| |||| ||||||||| ||||||||||  |||||||||||||||| ||| ||||||||||| ||||  |||||  ||||||||| |||||| |  |    
T  28604026 ataattattattattattttcatcattatcatgtatttaaaattaaatatcactatttaaacactgataatctgtgtaatctattttatgtggga-ccgc 28604124  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    | |||||||||||||||||||||||||| || |||||| | || ||| ||| | |||||||||||||    
T  28604125 atactctattttttcaattcacacaacactagatcaaaatttaattacttggtgtttaatcttccaa 28604191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 155
Target Start/End: Complemental strand, 15446439 - 15446300
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    |||||||||| || || ||||| ||||||||| ||||||||| |||||||||||||||||||||||| ||| || |||||||||||||| |||||| |      
T  15446439 ataataattattactacttttaccattatcaagtatttaaaaattaaataccacaatttaaacactactaatgtatgtgttctattttatgtggga-ccc 15446341  T
Q  115 cacactctattttttcaattcacacaacattacatcaaagt 155  Q
     |||||||||||||||||||||||  ||| ||| |||||||    
T  15446340 aacactctattttttcaattcacattacactacctcaaagt 15446300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 16 - 136
Target Start/End: Complemental strand, 25637920 - 25637801
Alignment:
Q  16 ataataattactattatttttatcattatcaaatattt-aaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||| || ||||||||||| |||  |||||||||||||||| |||||| |      
T  25637920 ataataattactattatttttatcattatcaagtatttaaaaattaaataccgcagtttaaacactactaa--tgtgtgttctattttatgtgggaccca 25637823  T
Q  115 cacactctattttttcaattca 136  Q
    ||  ||||| ||||||||||||    
T  25637822 caatctctaatttttcaattca 25637801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 28 - 153
Target Start/End: Complemental strand, 44630592 - 44630466
Alignment:
Q  28 attatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactcta-ttt 126  Q
    |||||| ||||||||||||  |||||||||||||| ||||| ||||||||| || ||| ||||||||||||||||| |||||| || ||   |||| |||    
T  44630592 attattattatcattatcaggtatttaaaattaaacaccactatttaaacaatactaatgtgtgtgttctattttatgtgggacctccaagttctatttt 44630493  T
Q  127 tttcaattcacacaacattacatcaaa 153  Q
    ||||||||||||||||| || ||||||    
T  44630492 tttcaattcacacaacactagatcaaa 44630466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 18 - 141
Target Start/End: Original strand, 32080318 - 32080443
Alignment:
Q  18 aataattactattatttttatcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttca 116  Q
    |||||||||||||||||||||||||||||  || |||||| ||||||| || ||| |||| |||| |||  |||||||||||||||| |||||| || ||    
T  32080318 aataattactattatttttatcattatcaggtacttaaaaattaaatatcataatataaatactattaatatgtgtgttctattttatgtgggacctcca 32080417  T
Q  117 cactcta-ttttttcaattcacacaa 141  Q
     |||||| ||||||||||||||||||    
T  32080418 aactctatttttttcaattcacacaa 32080443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 140
Target Start/End: Complemental strand, 7712198 - 7712074
Alignment:
Q  18 aataattactattattttt--atcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||  |||||||||| |||||||||| |||||| |||||| || ||| || |||  ||||||||||||| |||||| || ||      
T  7712198 aataattactattattttttcatcattatcagatatttaaaaataaatatcacaatatagacattattaatatgtgtgttctattctacgtgcgacctca 7712099  T
Q  116 acactctattttttcaattcacaca 140  Q
    ||| || ||||||| ||||||||||    
T  7712098 acattcaatttttttaattcacaca 7712074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 22 - 155
Target Start/End: Original strand, 7735474 - 7735608
Alignment:
Q  22 attactattatttttatcattatcaaatattt-aaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacact 120  Q
    ||||||||||||||||| ||||||   || || ||||||||||| || ||| ||||||||| |||  | |||||| |||||||  ||| | || |||| |    
T  7735474 attactattatttttattattatcgggtacttgaaaattaaatatcataatataaacactactaatatatgtgttatattttatatggcacctccacatt 7735573  T
Q  121 ctattttttcaattcacacaacattacatcaaagt 155  Q
    ||||| ||||||||||||||||| ||| |||||||    
T  7735574 ctattctttcaattcacacaacactacctcaaagt 7735608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 12002061 - 12001968
Alignment:
Q  16 ataataattactattatttttatcattat------caaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctatttta 103  Q
    |||||||||||||||||||||||||||||      |||||||| ||||||||||| | ||||| |||||||| ||| |||||| || |||||||    
T  12002061 ataataattactattatttttatcattatcaattacaaatattaaaaattaaatatcgcaattcaaacactactaatgtgtgtattttatttta 12001968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 40846523 - 40846480
Alignment:
Q  170 tttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||| |||||||||||| |||||||||||    
T  40846523 tttaatcttccaatttttcttccaacatcacaccaatgttccaa 40846480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 138; Significance: 3e-72; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 40125050 - 40124853
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||| |  |    
T  40125050 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 40124951  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  40124950 acactctattttttcaattcacacaacattagatcaaagtatatttacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 40124853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 38181438 - 38181253
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||   ||    
T  38181438 ataataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggactctc 38181339  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcaca 201  Q
    ||||| ||||||||||||||||||||||||| ||||||||||| ||| ||||| |||||| |||||||||||| ||||||| ||||    
T  38181338 acactttattttttcaattcacacaacattagatcaaagtataattacttgatgtttaatgttccaatttttcttccaacaacaca 38181253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 16 - 212
Target Start/End: Complemental strand, 15950731 - 15950528
Alignment:
Q  16 ataataattactattatttttatcat---tatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatc 112  Q
    ||||||||||||||||||||||||||   |||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||| | |    
T  15950731 ataataattactattatttttatcatcattatcaagtatttaaaattaaataccgcaatttaaacactattaatgtgtgtgttctattttatgtggcacc 15950632  T
Q  113 ttcacactctattttttcaattcacacaacattacatcaaagta----tagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgt 208  Q
    | |||||||||||||||||||||||||||||||| |||||||||    || ||| ||| | |||| ||||||||||||||||||||||||||||||||||    
T  15950631 tccacactctattttttcaattcacacaacattagatcaaagtataattaattacttggtgtttagtcttccaatttttcatccaacatcacatcaatgt 15950532  T
Q  209 tcca 212  Q
    ||||    
T  15950531 tcca 15950528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 1808391 - 1808587
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||  ||| |||||||||||||||||  ||||| |  |    
T  1808391 ataataattactattatttttatcattatcaaatatttaaaattaaataccgcaatttaaacacttctaatgtgtgtgttctattttatatggga-cccc 1808489  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||| ||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |  ||||||||||||  ||||||||||    
T  1808490 acactatattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcacactaatgttccaa 1808587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 28559272 - 28559076
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| || |    
T  28559272 ataataattactattatttttatcattatcaaatatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacctcc 28559173  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||| ||  ||||||||||| || ||||||||  || ||| | ||||||||||||||||||| || ||||| |||||||| ||||||    
T  28559172 acactctattttttccatgtacacaacattagattaaagtata-atatttggtgtttaatcttccaatttttcttcgaacattacatcaattttccaa 28559076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 16 - 201
Target Start/End: Original strand, 2966525 - 2966710
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||| |||||||||||||| || |||||||||||||||||| |||||||||||||| ||| |||||||||||||||||  ||||| | ||    
T  2966525 ataataattactataatttttatcattattaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatatgggaccctc 2966624  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcaca 201  Q
    |||||||||||||||||||| || ||||||| || ||| |||| ||| ||||| ||||||||||||||||||| ||||||||||||    
T  2966625 acactctattttttcaattcccataacattagataaaaatataattatttgatgtttaatcttccaatttttcttccaacatcaca 2966710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 212
Target Start/End: Complemental strand, 28564451 - 28564258
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||| ||||||||||||||||| |||| | || |    
T  28564451 ataataattactattatttttatcattatcaaatatttaaaattaaataccgtaatttaaacactactaatgtgtgtgttctattttatgtggaacctcc 28564352  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttcca 212  Q
    |||  |||||||||||||  ||||||||||| |||||||||||  || ||| | ||||||||||||||||||| |||||||| | || |||||||||    
T  28564351 aca--ctattttttcaatgtacacaacattagatcaaagtata-atatttggtgtttaatcttccaatttttcttccaacattatatgaatgttcca 28564258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 44925077 - 44924880
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| |||||| |||||||||| |||||| || |    
T  44925077 ataataattactgttatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgttttctattttatgtgggacctcc 44924978  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    | |||||| ||||||||||||||||| |||| ||||||||||| ||  ||  | |||||||||||||||| |  ||||||||||||  ||||||||||    
T  44924977 aaactctaatttttcaattcacacaagattagatcaaagtataattgattagtgtttaatcttccaatttattttccaacatcacactaatgttccaa 44924880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 18 - 200
Target Start/End: Complemental strand, 18875539 - 18875357
Alignment:
Q  18 aataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcac 117  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| |||||||||||||| |||  ||||||||||||| || |||||| |   ||    
T  18875539 aataattactattatttgtatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatatgtgtgttctattgtatgtgggacccctac 18875440  T
Q  118 actctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcac 200  Q
    || |||||||||||||||||||||||||| |||||| | || ||| |   ||||||||||||||||||||| |||||||||||    
T  18875439 acactattttttcaattcacacaacattagatcaaaatttaattactcagtatttaatcttccaatttttcttccaacatcac 18875357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 21 - 213
Target Start/End: Complemental strand, 1910099 - 1909906
Alignment:
Q  21 aattactattattttt-atcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacac 119  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||||||  ||||||||||| ||| ||||| | ||||||| | ||||||  | |||||    
T  1910099 aattactattattttttatcattatcaagtatttaaaattaaataccactgtttaaacactactaatgtgtgagctctatttcatgtgggacatccacac 1910000  T
Q  120 tctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |  |||||||||| |  ||||||||||    
T  1909999 tctattttttcaattcacacaacattagatcaaagtataattacttggtgtttaatcttccaatttattttccaacatcatactaatgttccaa 1909906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 207
Target Start/End: Original strand, 26780044 - 26780234
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||    |    
T  26780044 ataataattactattgtttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacaccc 26780143  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatg 207  Q
    ||||||||  ||||||||||||||||||||| || | |||||| ||| ||  | |||||||||  |||||||| |||||||| |||||||||    
T  26780144 acactcta-gttttcaattcacacaacattaaattagagtataattacttagtgtttaatcttttaatttttcttccaacattacatcaatg 26780234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 7 - 141
Target Start/End: Original strand, 33417461 - 33417595
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||    
T  33417461 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgt 33417560  T
Q  107 gggatcttcacactctattttttcaattcacacaa 141  Q
    | || |   ||||||||||||||||||||||||||    
T  33417561 gagacccatacactctattttttcaattcacacaa 33417595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 27 - 186
Target Start/End: Original strand, 7002594 - 7002755
Alignment:
Q  27 tattatttttatcattatcaaatattta--aaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctat 124  Q
    ||||||||||||| |||||   ||||||  ||||||||||||||||||||||||||| ||| || ||| |||||||||| ||| ||||  ||||||||||    
T  7002594 tattatttttatctttatcgggtatttagaaaattaaataccacaatttaaacactactaatgtatgtattctattttatgtgagatccccacactctat 7002693  T
Q  125 tttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttt 186  Q
    ||||||||||||||||| | || |||||||| || ||| ||| | ||||||||| |||||||    
T  7002694 tttttcaattcacacaatactagatcaaagtctaattacttggtgtttaatctttcaatttt 7002755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 17021243 - 17021347
Alignment:
Q  63 taccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagtta 162  Q
    |||| |||||||||||||| ||| ||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||| ||||||||||| |||    
T  17021243 taccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccc-cacactctattttttcaattcacacaacattagatcaaagtataatta 17021341  T
Q  163 gttgat 168  Q
     |||||    
T  17021342 cttgat 17021347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 63 - 168
Target Start/End: Original strand, 17551680 - 17551784
Alignment:
Q  63 taccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagtta 162  Q
    |||| |||||||||||||| ||| ||||||||||||||||| |||||| |  |||||||||||||||||||||||||||||||| ||||||||||| |||    
T  17551680 taccgcaatttaaacactactaatgtgtgtgttctattttatgtgggaccc-cacactctattttttcaattcacacaacattagatcaaagtataatta 17551778  T
Q  163 gttgat 168  Q
     |||||    
T  17551779 cttgat 17551784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 18 - 76
Target Start/End: Complemental strand, 23547758 - 23547700
Alignment:
Q  18 aataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaa 76  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||    
T  23547758 aataattactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaa 23547700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 27 - 155
Target Start/End: Complemental strand, 17953290 - 17953164
Alignment:
Q  27 tattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattt 126  Q
    ||||||||||||||| ||||   ||||||||| ||||||||| ||| |||||||| | | ||||||||||||||||  |||| | |  ||||||||||||    
T  17953290 tattatttttatcataatcaggcatttaaaataaaataccactatt-aaacactactgatgtgtgtgttctattttttgtggtaccc-cacactctattt 17953193  T
Q  127 tttcaattcacacaacattacatcaaagt 155  Q
    ||||||||||||||||| || ||||||||    
T  17953192 tttcaattcacacaacactagatcaaagt 17953164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 17027081 - 17027136
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaat 71  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  17027081 ataataattagtattatttttatgattatcaagtatttaaaattaaataccacaat 17027136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 16 - 71
Target Start/End: Original strand, 17557573 - 17557628
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaat 71  Q
    |||||||||| |||||||||||| |||||||| |||||||||||||||||||||||    
T  17557573 ataataattagtattatttttatgattatcaagtatttaaaattaaataccacaat 17557628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 213
Target Start/End: Original strand, 33417605 - 33417648
Alignment:
Q  170 tttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  33417605 tttaatcttccaatttttcatccaacatcacatcaatgttccaa 33417648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 29 - 133
Target Start/End: Original strand, 33100541 - 33100644
Alignment:
Q  29 ttatttttatcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctatttt 127  Q
    ||||| ||||||||||||| ||||||||| ||||||||  ||||||||| | || |||  ||||| |||||||||| |||||| |||| | |||||||||    
T  33100541 ttattgttatcattatcaagtatttaaaaattaaatactgcaatttaaagattattaa--tgtgtattctattttatgtgggaccttcgctctctatttt 33100638  T
Q  128 ttcaat 133  Q
    ||||||    
T  33100639 ttcaat 33100644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 17027131 - 17027223
Alignment:
Q  115 cacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttt-tcatccaacatcacatcaatgttccaa 213  Q
    |||| ||||||||||||||||||||||||||| ||      ||| ||| ||| | ||||||||||||||||| |||||||||||||||| ||||||||||    
T  17027131 cacaatctattttttcaattcacacaacattaaat------ataatta-ttggtgtttaatcttccaattttttcatccaacatcacattaatgttccaa 17027223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 115 - 213
Target Start/End: Original strand, 17557623 - 17557715
Alignment:
Q  115 cacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttt-tcatccaacatcacatcaatgttccaa 213  Q
    |||| ||||||||||||||||||||||||||| ||      ||| ||| ||| | ||||||||||||||||| |||||||||||||||| ||||||||||    
T  17557623 cacaatctattttttcaattcacacaacattaaat------ataatta-ttggtgtttaatcttccaattttttcatccaacatcacattaatgttccaa 17557715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 27 - 81
Target Start/End: Complemental strand, 24672464 - 24672410
Alignment:
Q  27 tattatttttatcattatcaaatatttaaaattaaataccacaatttaaacacta 81  Q
    |||||||| ||||||||| || |||||| ||||||||| ||||||||||||||||    
T  24672464 tattatttctatcattattaagtatttacaattaaatatcacaatttaaacacta 24672410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 21 - 126
Target Start/End: Original strand, 28859335 - 28859438
Alignment:
Q  21 aattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacact 120  Q
    |||||||||| |||| ||| |||||| ||||||||| |||||||  || ||||||| |||| ||   |||||||||||||||| |||||||| | |||||    
T  28859335 aattactattcttttcatcgttatcatatatttaaagttaaata--actatttaaatactactattatgtgtgttctattttatgtgggatcataacact 28859432  T
Q  121 ctattt 126  Q
     |||||    
T  28859433 ttattt 28859438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 49 - 102
Target Start/End: Original strand, 31440201 - 31440254
Alignment:
Q  49 tatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctatttt 102  Q
    |||||||||||||||| |||||||||||||||| ||| |  |||||||||||||    
T  31440201 tatttaaaattaaatatcacaatttaaacactactaatgattgtgttctatttt 31440254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 138; Significance: 3e-72; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 4931163 - 4931360
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| | |||| |  |    
T  4931163 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctattttatgcgggaccccc 4931262  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  4931263 acactctattttttcaattcacacaacattatatcaaagtataattacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 4931360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 26342138 - 26342342
Alignment:
Q  7 tcgaagaatataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgt 106  Q
    ||||| || |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| ||| ||||||||||||||||| ||    
T  26342138 tcgaataaaataataattactattatttttatcattatcaagtatttaaaattaaatatcacaatttaaacactactaatgtgtgtgttctattttatgt 26342237  T
Q  107 gggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaat 206  Q
    |||| |  | ||| |||||||||||||||||| || |||| || |||||||| ||| |||||||||||||||| |||||||||||||||||||||| |||    
T  26342238 gggacc--cccacactattttttcaattcacataatattaaattaaagtataattacttgatatttaatcttcgaatttttcatccaacatcacattaat 26342335  T
Q  207 gttccaa 213  Q
    |||||||    
T  26342336 gttccaa 26342342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 12256962 - 12257158
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||| | ||||||||||||||| |||||| |  |    
T  12256962 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgcgtgtgttctattttatgtggga-cccc 12257060  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||| ||||||||||| ||||||||||| ||| ||| |  |||||||||||| || |  |||||||||||| |||||||||||    
T  12257061 acactctattttttcaatttacacaacattaaatcaaagtataattatttggtgattaatcttccaaattctattccaacatcacaccaatgttccaa 12257158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 21672145 - 21672341
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||| |||||||||||||| ||||||||||| || ||| ||||||| ||||||||| ||||||||  |    
T  21672145 ataataattactattatttttatcattatcaagtatataaaattaaataccgcaatttaaacagtactaatgtgtgtgctctattttatgtgggatc-cc 21672243  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||| ||||||||||||||||||||||| ||| ||||||||||| ||| ||| | |||| |||||||||||||| |||||||||||| |||||||||||    
T  21672244 acattctattttttcaattcacacaacgttagatcaaagtataattacttggtgtttattcttccaatttttcttccaacatcacaccaatgttccaa 21672341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 3880908 - 3881108
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacg---tgtgtgttctattttacgtgggatc 112  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||| ||| |   |||||||||||||||| ||| || |    
T  3880908 ataataattactattatttttatcattatcaagtatttaaaattaaatatcacaatttaagcactactaatgatgtgtgtgttctattttatgtgagacc 3881007  T
Q  113 ttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttcca 212  Q
      ||||||||||||||||||||||| ||| |||| ||||||||||| ||| ||| ||||||||||||||||||||| |||||||||| |||| | |||||    
T  3881008 cccacactctattttttcaattcacgcaatattagatcaaagtataattacttggtatttaatcttccaatttttcttccaacatcagatcactattcca 3881107  T
Q  213 a 213  Q
    |    
T  3881108 a 3881108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 27 - 209
Target Start/End: Original strand, 3046525 - 3046706
Alignment:
Q  27 tattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattt 126  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| |  ||||||  ||||    
T  3046525 tattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtggga-ccccacacttaattt 3046623  T
Q  127 tttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgtt 209  Q
    |||||||||||||||| ||| |||||| |||| ||| ||| | ||||||||| ||||||||| |||||||||||| |||||||    
T  3046624 tttcaattcacacaactttatatcaaattataattacttggtgtttaatctttcaatttttcttccaacatcacaccaatgtt 3046706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 185
Target Start/End: Complemental strand, 42625739 - 42625565
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaatac-----cacaatttaaacactaataacgtgtgtgttctattttacgtggga 110  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||     | |||||||||||||| ||| ||||| ||||||||||| ||||||    
T  42625739 ataataattactattatttttatcattatcaagtatttaaaattaaatactgcaccgcaatttaaacactactaatgtgtgagttctattttatgtggga 42625640  T
Q  111 tcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaattt 185  Q
     |  |||||||||||||||||||||||| ||||||| ||||||||||| ||| ||| | ||||||||||||||||    
T  42625639 cccccacactctattttttcaattcacataacattagatcaaagtataattacttggtgtttaatcttccaattt 42625565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 67 - 207
Target Start/End: Complemental strand, 44508401 - 44508261
Alignment:
Q  67 acaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttg 166  Q
    ||||||||||||||| |||  ||||||||||||||||  ||||||   ||||||||||||||||||||||||||| |||| ||||||||||| ||| |||    
T  44508401 acaatttaaacactactaatatgtgtgttctattttatatgggattcccacactctattttttcaattcacacaatattagatcaaagtataattacttg 44508302  T
Q  167 atatttaatcttccaatttttcatccaacatcacatcaatg 207  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  44508301 atatttaatcttccaatttttcatccaacatcacatcaatg 44508261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 16 - 213
Target Start/End: Complemental strand, 10392246 - 10392046
Alignment:
Q  16 ataataattac-tattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    ||||||||||| | || ||||||| |||||||| |||||||||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||  | |    
T  10392246 ataataattacattttttttttattattatcaagtatttaaaattaaataccgcaatttaaacactgataacatgtgtgttctattttatgtggggccct 10392147  T
Q  115 cacactctatt--ttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttcca 212  Q
    |||||||||||  |||||||||||||||||| || ||||||||||| ||| ||| | ||||||||| | ||||| |  ||||| ||||| ||||||||||    
T  10392146 cacactctattttttttcaattcacacaacactagatcaaagtataattacttggtgtttaatctttcgattttcctcccaacttcacaccaatgttcca 10392047  T
Q  213 a 213  Q
    |    
T  10392046 a 10392046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 18 - 179
Target Start/End: Complemental strand, 13313468 - 13313307
Alignment:
Q  18 aataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcac 117  Q
    |||||||  ||||||||| ||||||||||| |||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| ||||||  | |||    
T  13313468 aataattgttattattttcatcattatcaagtatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggacatccac 13313369  T
Q  118 actctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttc 179  Q
    |||||||||||||||||||||||| | || |||||||| |||| | || || ||||||||||    
T  13313368 actctattttttcaattcacacaatactaaatcaaagtttagtaacttaatgtttaatcttc 13313307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 29 - 177
Target Start/End: Complemental strand, 23247701 - 23247554
Alignment:
Q  29 ttatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttt 128  Q
    ||||||||||||||||||| ||||||||||||||||||  ||||||||||||| ||| || ||| |||||||||| |||||| | | |||||||||||||    
T  23247701 ttatttttatcattatcaagtatttaaaattaaataccgtaatttaaacactactaatgtttgttttctattttaggtgggaccat-acactctattttt 23247603  T
Q  129 tcaattcacacaacattacatcaaagtatagttagttgatatttaatct 177  Q
    |||||||||| ||||||| ||||||||||| ||| ||| | ||||||||    
T  23247602 tcaattcacataacattagatcaaagtataattacttggtgtttaatct 23247554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 22 - 128
Target Start/End: Complemental strand, 12181902 - 12181796
Alignment:
Q  22 attactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactc 121  Q
    |||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| ||| ||||||||||||||||| |||||| |  |||||||    
T  12181902 attactattatttttatcattatcaagtatttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggacccccacactc 12181803  T
Q  122 tattttt 128  Q
    |||||||    
T  12181802 tattttt 12181796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 2595781 - 2595905
Alignment:
Q  87 gtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttt 186  Q
    ||||||||||||||||| |||||||   |||||||||||||||||||||||||||||||| || ||||| || ||| ||| | |||||||||||||||||    
T  2595781 gtgtgtgttctattttatgtgggatacccacactctattttttcaattcacacaacattagattaaagtgtaattatttggtgtttaatcttccaatttt 2595880  T
Q  187 tcatccaacatcacatcaatgttcc 211  Q
    || |||||||| |||||||||||||    
T  2595881 tcttccaacattacatcaatgttcc 2595905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 16 - 182
Target Start/End: Complemental strand, 26286314 - 26286146
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||| | ||||||||| ||||||||||  |||||||||||||||||||| |||||||||||| ||| ||||||||||||||||| |||||| |  |    
T  26286314 ataataataattattattttcatcattatcagttatttaaaattaaataccactatttaaacactactaatgtgtgtgttctattttatgtgggaccccc 26286215  T
Q  116 acac--tctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    ||||  | | ||||||||||| | |||||| || |||||||| || ||| ||| | |||||||||||||    
T  26286214 acactattttttttttcaatttatacaacactagatcaaagtttaattacttggtgtttaatcttccaa 26286146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 88 - 213
Target Start/End: Original strand, 12802295 - 12802419
Alignment:
Q  88 tgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaattttt 187  Q
    |||| ||||||||||| |||||| |  |||||||||||||||||||||||||||||||| || |||||||| ||| ||| | |||||||||||||||| |    
T  12802295 tgtgagttctattttatgtgggaccc-cacactctattttttcaattcacacaacattagattaaagtataattacttggtgtttaatcttccaatttat 12802393  T
Q  188 catccaacatcacatcaatgttccaa 213  Q
      ||||||||||||  ||||||||||    
T  12802394 tttccaacatcacactaatgttccaa 12802419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 31 - 155
Target Start/End: Original strand, 4580420 - 4580544
Alignment:
Q  31 atttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttc 130  Q
    ||||| ||||||||||  |||||| ||||||||||||| || ||||||||| ||| |||||||||||||||||  ||||| |   ||||||||||||||     
T  4580420 attttcatcattatcaggtatttagaattaaataccactatataaacactactaatgtgtgtgttctattttatatgggacccctacactctattttttt 4580519  T
Q  131 aattcacacaacattacatcaaagt 155  Q
    ||||||||||||| || ||||||||    
T  4580520 aattcacacaacactaaatcaaagt 4580544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 91
Target Start/End: Original strand, 12800330 - 12800405
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtg 91  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||  |||||||||||||| ||| |||||    
T  12800330 ataataattactattatttttatcattatcaagtatttaaaattaaatactgcaatttaaacactactaatgtgtg 12800405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 16 - 138
Target Start/End: Complemental strand, 9815032 - 9814909
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    |||||||||||||||||||| || |||||||| ||||||||| ||||||||| ||||||||| |||| ||| || |||||||||||||| || |||||      
T  9815032 ataataattactattattttcattattatcaagtatttaaaaattaaataccgcaatttaaaaactactaatgtatgtgttctattttatgttggatccc 9814933  T
Q  115 cacactctattttttcaattcaca 138  Q
    |||| |||| | ||| ||||||||    
T  9814932 cacattctaatattttaattcaca 9814909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 143
Target Start/End: Original strand, 15973668 - 15973790
Alignment:
Q  23 ttactattatttttatcattatcaaatatttaaaatt--aaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacact 120  Q
    |||||||||||||||||||||||   ||||||||| |  |||||||| ||| |||| |||| ||| ||||||||||||||||| ||| || || ||||||    
T  15973668 ttactattatttttatcattatccggtatttaaaaattaaaataccataatataaatactactaatgtgtgtgttctattttatgtgcgacctccacact 15973767  T
Q  121 ctattttttcaattcacacaaca 143  Q
     ||||||||| ||||||||||||    
T  15973768 ttattttttcgattcacacaaca 15973790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 52 - 182
Target Start/End: Original strand, 30259238 - 30259368
Alignment:
Q  52 ttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc-acactctattttttcaattcacacaacattacatc 150  Q
    ||||||||||||| ||| |||||||||||| ||| || |||| ||||||||| |||| |||| | ||||||||||||||||||| ||| |||| || |||    
T  30259238 ttaaaattaaatatcactatttaaacactactaatgtatgtgatctattttatgtgg-atctcccacactctattttttcaatttacaaaacactagatc 30259336  T
Q  151 aaagtatagttagttgatatttaatcttccaa 182  Q
    ||||| || ||| ||| |||||||||||||||    
T  30259337 aaagtttaattacttggtatttaatcttccaa 30259368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 23151804 - 23151683
Alignment:
Q  56 aattaaataccacaatttaaacactaataac--gtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaaa 153  Q
    ||||||||| | |||||||||||||| |||   ||||||||||||||||| | ||||    |||||| ||||||||||||||||||||||||| ||||||    
T  23151804 aattaaatatctcaatttaaacactactaatatgtgtgtgttctattttatgcgggactcccacactttattttttcaattcacacaacattagatcaaa 23151705  T
Q  154 gtatagttagttgatatttaat 175  Q
    ||||| ||| ||||| ||||||    
T  23151704 gtataattacttgatgtttaat 23151683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 16 - 112
Target Start/End: Complemental strand, 10716957 - 10716860
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaa-ttaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatc 112  Q
    |||||||||||||||||||| || |||||||| ||||||||| ||||||||| ||||||||| |||| ||| || |||||||||||||| || |||||    
T  10716957 ataataattactattattttcattattatcaagtatttaaaaattaaataccgcaatttaaaaactactaatgtatgtgttctattttatgttggatc 10716860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 8269240 - 8269304
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacact 80  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||| | || ||||||||||    
T  8269240 ataataattactattatttttatcattatcaagtatttaaaattaaatatcgcagtttaaacact 8269304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 34 - 103
Target Start/End: Complemental strand, 10387488 - 10387418
Alignment:
Q  34 tttatcattatcaaatatttaaaattaaataccacaatttaaaca-ctaataacgtgtgtgttctatttta 103  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||  |||  ||||||||||||||||    
T  10387488 tttatcattatcaaatatttaaaattaaataccacaatttaaacacctgctaatatgtgtgttctatttta 10387418  T

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Target: chr7; HSP #25
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 29 - 74
Target Start/End: Complemental strand, 44508472 - 44508427
Alignment:
Q  29 ttatttttatcattatcaaatatttaaaattaaataccacaattta 74  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44508472 ttatttttatcattatcaaatatttaaaattaaataccacaattta 44508427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 107
Target Start/End: Original strand, 16373288 - 16373377
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtg 107  Q
    |||||||| ||||||||||||||| ||||||  ||||||||||||| |||  |||||||||||||| |||  |||||||| |||||||||||    
T  16373288 ataataatgactattatttttatcgttatcaggtatttaaaattaactactgcaatttaaacactactaa--tgtgtgttatattttacgtg 16373377  T

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Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 81
Target Start/End: Complemental strand, 6590169 - 6590104
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacacta 81  Q
    |||||||| ||||||||||||| | ||||||| ||||||||||||||||  |||||||||||||||    
T  6590169 ataataatgactattatttttagctttatcaagtatttaaaattaaataatacaatttaaacacta 6590104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 103
Target Start/End: Complemental strand, 27246702 - 27246617
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctatttta 103  Q
    |||||||| | ||||| ||||||||||||||| ||||||  | |||||| | |||||||||||||| |||  ||||||||||||||||    
T  27246702 ataataatgattattagttttatcattatcaagtatttatgaataaatagcgcaatttaaacactattaa--tgtgtgttctatttta 27246617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 158
Target Start/End: Original strand, 8269346 - 8269390
Alignment:
Q  114 tcacactctattttttcaattcacacaacattacatcaaagtata 158  Q
    ||||||||||||| |||||||||||||| |||| |||||||||||    
T  8269346 tcacactctatttattcaattcacacaatattagatcaaagtata 8269390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 63
Target Start/End: Complemental strand, 23152224 - 23152177
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaat 63  Q
    |||||||| | ||||||||||||||||||||| | |||||||||||||    
T  23152224 ataataataattattatttttatcattatcaagtttttaaaattaaat 23152177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 133; Significance: 3e-69; HSPs: 2)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 30117 - 30313
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||  || ||||||||||||||| |||||||||||||| ||| ||||||||||||||||| ||||||||       
T  30117 ataataattactattatttttatcattatcatgtagttaaaattaaataccgcaatttaaacactactaatgtgtgtgttctattttatgtgggatccct 30216  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttcca 212  Q
    ||||||||||||||||||||||||||||||| |||||| |||| ||| ||| | |||||||||||||||||||||||||||||||||||||||||||    
T  30217 acactctattttttcaattcacacaacattagatcaaaatataattacttggtgtttaatcttccaatttttcatccaacatcacatcaatgttcca 30313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 28 - 182
Target Start/End: Original strand, 26393 - 26547
Alignment:
Q  28 attatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctatttt 127  Q
    |||||||| || |||||||  |||||||||||||||||| | |||||||||||| ||| ||||||||||||||||| |||||| || | |||||||||||    
T  26393 attattttcattattatcaggtatttaaaattaaatacctctatttaaacactactaatgtgtgtgttctattttatgtgggacctccgcactctatttt 26492  T
Q  128 ttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa 182  Q
    |||||||||||||||  || || ||||| || ||| ||| | |||||||||||||    
T  26493 ttcaattcacacaactctagatgaaagtttaattatttggtgtttaatcttccaa 26547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 7 - 213
Target Start/End: Original strand, 8039 - 8246
Alignment:
Q  7 tcgaagaatataataattactattatttt-tatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacg 105  Q
    ||||| || |||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||| |    
T  8039 tcgaataaaataataattactattattttttatcattatcaagtatttaaaattaaataccacaatttaaacactactaatgtgtgtgttctatcttatg 8138  T
Q  106 tgggatcttcacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaa 205  Q
    ||||| |  |||||||||||||||||||||||||||||||| ||||||||||| ||| ||| | |||||||||||||||| |||||||||||| ||||||    
T  8139 tgggacccccacactctattttttcaattcacacaacattaaatcaaagtataattacttggtgtttaatcttccaatttatcatccaacatcgcatcaa 8238  T
Q  206 tgttccaa 213  Q
    ||||||||    
T  8239 tgttccaa 8246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 130; Significance: 2e-67; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 5004 - 5201
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||| | |||| |  |    
T  5004 ataataattactattatttttatcactatcaagtatttaaaattaaataccacaatttaaacactactaatgtgagtgttctattttatgcgggaccccc 5103  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||||||||||| ||||||||||| | | ||| | ||||||||| ||||||||||||||||||||||||||||||||||    
T  5104 acactctattttttcaattcacacaacattagatcaaagtatattaacttggtgtttaatctttcaatttttcatccaacatcacatcaatgttccaa 5201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 201
Target Start/End: Complemental strand, 443095 - 442911
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | | ||| ||||||||||||||||| |||||| |  |    
T  443095 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacccaactaatgtgtgtgttctattttatgtggga-cccc 442997  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcaca 201  Q
    ||||||||||||||||||||||||||||||| ||||||||||| ||| || || |||||||||||||||| |  ||||||||||||    
T  442996 acactctattttttcaattcacacaacattagatcaaagtataattatttaatgtttaatcttccaatttattttccaacatcaca 442911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 54 - 143
Target Start/End: Original strand, 155196 - 155288
Alignment:
Q  54 aaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctatt---ttttcaattcacacaaca 143  Q
    |||||| ||||||| ||||||||||||| | | || | | ||||||||||  ||||||| ||||||||||||   ||||||||||||||||||    
T  155196 aaaattgaataccataatttaaacactacttatgtatatattctattttatatgggatcctcacactctattttattttcaattcacacaaca 155288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0690 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0690
Description:

Target: scaffold0690; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 6172 - 6370
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | ||| |||||| |||||| ||| |||||| ||      
T  6172 ataataattactattatttttatcattatcaagtatttaaaattaaataccacaatttaaacaccactaatgtgtgtattctatcttatgtgggacctca 6271  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaa-tttttcatccaacatcacatcaatgttccaa 213  Q
    ||||||||||||||||||||||| ||||||| ||| ||||||| ||| ||| | |||||| ||  || |||||| ||||||||| || |||||||||||    
T  6272 acactctattttttcaattcacataacattagatcgaagtataattacttggtgtttaattttataattttttcttccaacatcgcaccaatgttccaa 6370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 16 - 212
Target Start/End: Original strand, 36062 - 36257
Alignment:
Q  16 ataataattactattatttttatcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| | ||| ||||||||||| |||||  |  |    
T  36062 ataataattactattatttttatcattatcaaatatttaaaattaaataccgcagtttaaacactactaatgcgtgagttctattttatgtggg-gcccc 36160  T
Q  116 acactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttcca 212  Q
    ||||||||||||||||||||| ||||||||| |||||| |||| ||| ||| | ||||||||| |||||| |  | ||||||||||  |||||||||    
T  36161 acactctattttttcaattcatacaacattagatcaaaatataattatttggtgtttaatctttcaatttatttttcaacatcacactaatgttcca 36257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 84; Significance: 5e-40; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 213
Target Start/End: Original strand, 4911 - 5106
Alignment:
Q  16 ataataattactattattttt-atcattatcaaatatttaaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatctt 114  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||| ||| |||||||| | |||  | |||||| ||||||| |||| | |      
T  4911 ataataattactattattttttatcattatcaagtatttaaaattaaataccgcaacttaaacacaactaa--tatgtgttatattttatgtggtaccc- 5007  T
Q  115 cacactctattttttcaattcacacaacattacatcaaagtatagttagttgatatttaatcttccaatttttcatccaacatcacatcaatgttccaa 213  Q
    |||||| ||||||||||||||||||||||||| ||||||||||| |||  || | ||||||||| ||||||||| |||||||||||| ||||| |||||    
T  5008 cacactatattttttcaattcacacaacattagatcaaagtataattacgtggtgtttaatctttcaatttttcttccaacatcacaccaatgatccaa 5106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 53 - 182
Target Start/End: Complemental strand, 65013 - 64885
Alignment:
Q  53 taaaattaaataccacaatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacactctattttttcaattcacacaacattacatcaa 152  Q
    |||| ||||||||||| ||||||| |||| ||| ||||||||||||||||| |||||| |   |||||||||||||| ||||||||||||| || |||||    
T  65013 taaatttaaataccactatttaaagactactaatgtgtgtgttctattttatgtgggacccctacactctatttttttaattcacacaacactagatcaa 64914  T
Q  153 agtatagttagttgatatttaatcttccaa 182  Q
    ||| || ||| ||| | |||||||||||||    
T  64913 agtttaattacttg-tgtttaatcttccaa 64885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 138
Target Start/End: Complemental strand, 3948 - 3833
Alignment:
Q  27 tattatttttatcattatcaaatatttaaaattaaataccac------aatttaaacactaataacgtgtgtgttctattttacgtgggatcttcacact 120  Q
    ||||||||||||||||||||| ||||| |||||||||||| |      ||||||||||||| | |  |||||||| ||||||| ||| || | |||| ||    
T  3948 tattatttttatcattatcaagtatttgaaattaaataccgcaatattaatttaaacactattga--tgtgtgttttattttatgtgagaccctcactct 3851  T
Q  121 ctattttttcaattcaca 138  Q
    ||||||||| ||||||||    
T  3850 ctatttttttaattcaca 3833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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