View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7712_high_19 (Length: 361)
Name: NF7712_high_19
Description: NF7712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7712_high_19 |
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Alignment Details
Target: chr1 (Bit Score: 309; Significance: 1e-174; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 309; E-Value: 1e-174
Query Start/End: Original strand, 15 - 343
Target Start/End: Complemental strand, 13347698 - 13347370
Alignment:
| Q |
15 |
tggtgtttacaataaatatgttggtctattttatggaatacaaatgaacatggctagtactggagtcagacaaataggaatccaactccttggaattttg |
114 |
Q |
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| T |
13347698 |
tggtgtttacaataaatatgttggtctattttatggaatacaaatgaacatggctagtactggacgcaggcaaataggaatccaactccttggaattttg |
13347599 |
T |
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| Q |
115 |
tttgttatctttgttaatgttgtaagtacaagtttgatatgtctcttcattcgactcttcgttccattgagaatgtccgaagaggatatggaaatcggtg |
214 |
Q |
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| T |
13347598 |
tttgttatctttgttaatgttgtaagtacaagtttgatatgtctcttcattcgactcttcgttccattgagaatgtctgaagaggatatggaaatcggtg |
13347499 |
T |
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| Q |
215 |
acgaggctgctcatggtgaagaagcttatgcaatttggggtcaaggtgataaacatgagaattcaagttcaaaatatggaagttctttgtatgaagatgt |
314 |
Q |
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| T |
13347498 |
acgaggctgctcatggtgaagaagcttatgcaatttggggtcaaggtgataaacatgagaattcaaattcaaaatatggaagttctttgtatgaagatgt |
13347399 |
T |
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| Q |
315 |
tgaagttgcggccaccacgaagaataagc |
343 |
Q |
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| T |
13347398 |
tgaagttgcggccaccacgaagaataagc |
13347370 |
T |
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