View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7712_low_27 (Length: 308)
Name: NF7712_low_27
Description: NF7712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7712_low_27 |
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Alignment Details
Target: chr7 (Bit Score: 151; Significance: 7e-80; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 79 - 291
Target Start/End: Original strand, 41182726 - 41182922
Alignment:
| Q |
79 |
tattggattagtttgtttcaccctttacatgcttaacagtacaaatctttggttcagggtctgttgtttttgctgagtgtgggtcattagtcattacact |
178 |
Q |
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| T |
41182726 |
tattggattagtttgtttcaccctttacatgcttaacagtacaaatctttggttc---------------tgctgagtgtgggtcattagtcattacact |
41182810 |
T |
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| Q |
179 |
tcatccaagggtacttgtcctacagcatgtaaaagtgtttggattgtaaaataaggcaaattgcaaatgaacatcacaactgcagttacttttaaaagtt |
278 |
Q |
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| T |
41182811 |
tcatccaagggtacttgtcctacagcatgtaaaagtgtttggattgtaaaataaggc-aattgcaaatgaacatcacaactgtagttacttttaaaagtt |
41182909 |
T |
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