View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7712_low_49 (Length: 232)
Name: NF7712_low_49
Description: NF7712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7712_low_49 |
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Alignment Details
Target: chr3 (Bit Score: 199; Significance: 1e-108; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 21 - 219
Target Start/End: Complemental strand, 40411937 - 40411739
Alignment:
| Q |
21 |
atggggacaatccatatcagaaatcacacacctcatcttatgcacaacttcttgcttcggcagcgttcccggtccagatactcacctcgccagacttctt |
120 |
Q |
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| T |
40411937 |
atggggacaatccatatcagaaatcacacacctcatcttatgcacaacttcttgcttcggcagcgttcccggtccagatactcacctcgccagacttctt |
40411838 |
T |
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| Q |
121 |
aatctcaaaccaaccgttaacagactcatgatttttggtcacggttgccacgccggtggcaccatcctccgtatcgccaaagacatggctgagaataat |
219 |
Q |
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| T |
40411837 |
aatctcaaaccaaccgttaacagactcatgatttttggtcacggttgccacgccggtggcaccatcctccgtatcgccaaagacatggctgagaataat |
40411739 |
T |
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