View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7713_low_10 (Length: 326)
Name: NF7713_low_10
Description: NF7713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7713_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 297; Significance: 1e-167; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 297; E-Value: 1e-167
Query Start/End: Original strand, 1 - 305
Target Start/End: Complemental strand, 38932323 - 38932019
Alignment:
| Q |
1 |
ttccaggatgtggagagacatatgaagagccacaatgggaaaaaggaggaaggccacaacaaccacaggatcgtcaccagaaggttcgttatgtgaaaca |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38932323 |
ttccaggatgtggagagacatatgaagagccacaatgggaaaaaggaggaaggccacaacaaccacaggatcgtcaccagaaggttcgttatgtgaaaca |
38932224 |
T |
|
| Q |
101 |
gggtgaccttattgctattccacctggtgttccttactggacctacaattacggcaataccccgcttattattgtcactctcctcgacacttccaataaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
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| T |
38932223 |
gggtgaccttattgctattccacctggtgttccttactggacctacaattacggcaatacccctcttattattgtcactctcctcgacacttccaataaa |
38932124 |
T |
|
| Q |
201 |
ctaaaccaactcgatcgtatcccaagagtaagcaacattaattataatctaacaattactcctaaatgcaaccaactttgttatatataaatgattcatt |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
38932123 |
ctaaaccaactcgatcgtatcccaagagtaagcaacattaattataatctaacaattactcctaaatgcaaccaactttgttatatataaatcattcatt |
38932024 |
T |
|
| Q |
301 |
tttta |
305 |
Q |
| |
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||||| |
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| T |
38932023 |
tttta |
38932019 |
T |
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