View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7713_low_18 (Length: 240)
Name: NF7713_low_18
Description: NF7713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7713_low_18 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 25 - 240
Target Start/End: Original strand, 3928366 - 3928581
Alignment:
| Q |
25 |
tcccactaagtgggactgtaaaaatcaagaaatcgagagtttaccttctaatccacaacattcaagatttatctcacaaaagatattagattgacattgt |
124 |
Q |
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| T |
3928366 |
tcccactaagtgggactgtaaaaatcaagaaatcgagagtttaccttctaatccgcaacattcaagatttatctcgcaaaagatattagattgacattgt |
3928465 |
T |
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| Q |
125 |
gaaattctggaattaaaaacacatagtagttcggaacattgttacaagagaaaaataagctaagattcataacagatgaaccaaaccttaacagaacaac |
224 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
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| T |
3928466 |
gaaattctggaattaaaaacacatagtagttcggaacattgttacaagagaaaaataagctaagattcataacagatgaaccaaaccttaacagaataac |
3928565 |
T |
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| Q |
225 |
atttatgaaatcttct |
240 |
Q |
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|||||||||||||||| |
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| T |
3928566 |
atttatgaaatcttct |
3928581 |
T |
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