View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7713_low_7 (Length: 367)
Name: NF7713_low_7
Description: NF7713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7713_low_7 |
 |  |
|
| [»] scaffold0024 (1 HSPs) |
 |  |  |
|
Alignment Details
Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 2659016 - 2659367
Alignment:
| Q |
1 |
aatatcaccattatcaaaagacaattttgatttattgtaataacgaaaatacttaataacgagtacaagaaaaggagggatcctagtgttaggattacta |
100 |
Q |
| |
|
||||||||||||||||||| |||| |||||||||||| || || |||||| |||||| |||| |||||||| ||||||| |||| |||||| |||| |
|
|
| T |
2659016 |
aatatcaccattatcaaaaaacaagtttgatttattggaagaataaaaatatttaatagtgagttcaagaaaaccagggatcgtagtcttaggaacacta |
2659115 |
T |
 |
| Q |
101 |
gcatttgtaaaactgaatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatata |
200 |
Q |
| |
|
||||||||| |||| ||||||| |||||||| | ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||| || |
|
|
| T |
2659116 |
gcatttgtagaactcgatgaaagtttgtaaatttcttcaataacgaaaaagggaagctgattttcaagtaacaataaatctaatgctataccatcatcta |
2659215 |
T |
 |
| Q |
201 |
accaaggtttaaagagaatcc---caccacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaagttcatcatg |
297 |
Q |
| |
|
||||||||||||| |||| || || || || | | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| || |
|
|
| T |
2659216 |
accaaggtttaaatagaaacccatcatcataatagtatgtccaaaaaagttgaattataaaacaggaatcgattaagattaacttaacaagttcattatc |
2659315 |
T |
 |
| Q |
298 |
agaaaatgggaaggtttcagaataacagcgtttgaaatcagataagatagat |
349 |
Q |
| |
|
||||||||| | |||||| |||||||| | ||||||| ||||||| ||||| |
|
|
| T |
2659316 |
agaaaatggtagggtttcggaataacaacttttgaaacgagataagttagat |
2659367 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 1 - 348
Target Start/End: Original strand, 2997413 - 2997760
Alignment:
| Q |
1 |
aatatcaccattatcaaaagacaattttgatttattgtaataacgaaaatacttaataacgagtacaagaaaaggagggatcctagtgttaggattacta |
100 |
Q |
| |
|
||||||||||| ||||||| |||| |||||||||||| || || ||| | |||||| |||| |||||||| ||||||| ||||||||||||||||| |
|
|
| T |
2997413 |
aatatcaccatcatcaaaaaacaagtttgatttattgaaagaaaagaaaaaattaatagtgagttcaagaaaacaagggatcatagtgttaggattacta |
2997512 |
T |
 |
| Q |
101 |
gcatttgtaaaactgaatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatata |
200 |
Q |
| |
|
||||||||| |||||||||||||| ||||||| ||||||||||||||||| ||||| |||||||||||||||| ||||| | | ||||| | ||| | |
|
|
| T |
2997513 |
gcatttgtagaactgaatgaaagactgtaaattttttcaataacgaaaaagggaagttgattttcaagtaacattaaatttgttgttataccatcatcga |
2997612 |
T |
 |
| Q |
201 |
accaaggtttaaagagaatcccaccacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaagttcatcatgaga |
300 |
Q |
| |
|
||||| ||| ||||| || ||||||| | | |||| | ||| ||| ||| ||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2997613 |
accaaagttcaaagacaaacccaccatagtggtatctcaagaaaagttcaattataaaaccggaatcgattaagattaacttaacaagttcatcatgaga |
2997712 |
T |
 |
| Q |
301 |
aaatgggaaggtttcagaataacagcgtttgaaatcagataagataga |
348 |
Q |
| |
|
|||||| | |||||| |||||||| |||||||||| |||||||||||| |
|
|
| T |
2997713 |
aaatggtagggtttcggaataacaacgtttgaaattagataagataga |
2997760 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 121; E-Value: 6e-62
Query Start/End: Original strand, 1 - 347
Target Start/End: Complemental strand, 2964562 - 2964204
Alignment:
| Q |
1 |
aatatcaccattatcaaaagacaattttgatttattgtaataacgaaaatacttaataacgagtacaagaaaaggagggatcctagtgttaggattacta |
100 |
Q |
| |
|
||||||||| ||||||||| |||||||||||||||||||||| |||||| | | || |||| |||||||| |||||| ||||||||||| |||| |
|
|
| T |
2964562 |
aatatcacccttatcaaaatccaattttgatttattgtaataatcaaaataatcagtagtgagtttaagaaaagaagggatgttagtgttaggaacacta |
2964463 |
T |
 |
| Q |
101 |
gcatttgtaaaactgaatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatata |
200 |
Q |
| |
|
||||||||| |||| ||||||||| ||||||| ||||||||||||||| | |||||||||||||||||||||| ||||||| || ||||| |||||||| |
|
|
| T |
2964462 |
gcatttgtagaactcaatgaaagactgtaaattttttcaataacgaaatagggaagctgattttcaagtaacattaaatctgatcttataccaacatata |
2964363 |
T |
 |
| Q |
201 |
accaaggtttaaagagaat---------cc---caccacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaag |
288 |
Q |
| |
|
|||||||| || ||||||| || || || || | ||| |||||| ||| ||| ||||||| |||||||||||||||||||| ||||| |
|
|
| T |
2964362 |
accaaggtatagagagaatattaatgcaccgaacatcataataggatctgcaaaaaagttcaattataaaaccagaatcgattaagattaacttgacaag |
2964263 |
T |
 |
| Q |
289 |
ttcatcatgagaaaatgggaaggtttcagaataacagcgtttgaaatcagataagatag |
347 |
Q |
| |
|
|||||||||||||||||| | ||||| |||||||||| |||||||||||||||||||| |
|
|
| T |
2964262 |
ttcatcatgagaaaatggtagagtttcggaataacagcatttgaaatcagataagatag |
2964204 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 116 - 349
Target Start/End: Complemental strand, 2934546 - 2934313
Alignment:
| Q |
116 |
aatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatataaccaaggtttaaaga |
215 |
Q |
| |
|
||||||||| ||||||| ||||||||||||||||| |||||||||||||||||||||| |||||| | ||||| | || |||| |||||||||||| |
|
|
| T |
2934546 |
aatgaaagactgtaaattttttcaataacgaaaaagggaagctgattttcaagtaacattaaatcgtctgttataccagtatctaacaaaggtttaaaga |
2934447 |
T |
 |
| Q |
216 |
gaatcccaccacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaagttcatcatgagaaaatgggaaggtttc |
315 |
Q |
| |
|
|| ||| || || | ||||||||||| ||||||| |||||| |||||| ||||| |||||||||||||||||||||||||||||||| | |||||| |
|
|
| T |
2934446 |
gacgcccttcataatagtctctccaaaaaagttgaattataaaagcggaatctattaaaattaacttaacaagttcatcatgagaaaatggtagggtttc |
2934347 |
T |
 |
| Q |
316 |
agaataacagcgtttgaaatcagataagatagat |
349 |
Q |
| |
|
||||||||| |||||||||||||||||||||||| |
|
|
| T |
2934346 |
agaataacaacgtttgaaatcagataagatagat |
2934313 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 2951992 - 2951656
Alignment:
| Q |
1 |
aatatcaccattatcaaaagacaattttgatttattgtaataacgaaaatacttaataacgagtacaagaaaaggagggatcctagtgttaggattacta |
100 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||| |||||| | |||| |||| |||||||| | ||||| ||||| ||||| | || |
|
|
| T |
2951992 |
aatatcacccttatcaaaatccaattttgatttattgtaataaccaaaataatgaatagtgagtttaagaaaagaatggatcatagtgataggaacatta |
2951893 |
T |
 |
| Q |
101 |
gcatttgtaaaactgaatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatata |
200 |
Q |
| |
|
| | ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| || ||||| | | || |
|
|
| T |
2951892 |
g------------tcaatgaaagactgtaaattttttcaataacgaaaaagggaagctgattttcaagtaaccataaatcgtgtattataccagtaccta |
2951805 |
T |
 |
| Q |
201 |
accaaggtttaaagagaatcccaccacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaagttcatcatgaga |
300 |
Q |
| |
|
|||||||||||||||| ||| || || | | |||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2951804 |
accaaggtttaaagagctccccttcataacaggatgtccaaaaaagttgaattataaaagcggaatcgattaagattaacttaacaagttcatcatgaga |
2951705 |
T |
 |
| Q |
301 |
aaatgggaaggtttcagaataacagcgtttgaaatcagataagatagat |
349 |
Q |
| |
|
|||||| | ||||||||||||||| | |||||||||||||||||||||| |
|
|
| T |
2951704 |
aaatggtagggtttcagaataacaacttttgaaatcagataagatagat |
2951656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 117 - 348
Target Start/End: Complemental strand, 2982818 - 2982587
Alignment:
| Q |
117 |
atgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatataaccaaggtttaaagag |
216 |
Q |
| |
|
||||| || ||||||| ||||||||||||||||| |||||||||||||||||||||| || ||| |||||||| || | ||||||||||| |||||| |
|
|
| T |
2982818 |
atgaacgactgtaaattttttcaataacgaaaaagggaagctgattttcaagtaacagtacatcatataatataagactttttaaccaaggttgaaagag |
2982719 |
T |
 |
| Q |
217 |
aatcccaccacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaagttcatcatgagaaaatgggaaggtttca |
316 |
Q |
| |
|
| ||||||| || |||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| | || |||| |
|
|
| T |
2982718 |
agccccaccataatattttctccaaaaaagttgaattataaaagcggaatcgattaagattaacttaacaagttcattatgagaaaatggtaggggttca |
2982619 |
T |
 |
| Q |
317 |
gaataacagcgtttgaaatcagataagataga |
348 |
Q |
| |
|
||||||||| |||||||||||||||||||||| |
|
|
| T |
2982618 |
gaataacagtgtttgaaatcagataagataga |
2982587 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 1 - 349
Target Start/End: Complemental strand, 2927210 - 2926874
Alignment:
| Q |
1 |
aatatcaccattatcaaaagacaattttgatttattgtaataacgaaaatacttaataacgagtacaagaaaaggagggatcctagtgttaggattacta |
100 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||| |||||| | |||| |||| |||||||| | ||||| ||||| ||||| | || |
|
|
| T |
2927210 |
aatatcacccttatcaaaattcaattttgatttattgtaataaccaaaataatgaatagtgagtttaagaaaagaatggatcatagtggtaggaacatta |
2927111 |
T |
 |
| Q |
101 |
gcatttgtaaaactgaatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatata |
200 |
Q |
| |
|
| | ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| | ||||| | || || |
|
|
| T |
2927110 |
g------------tcaatgaaagactgtaaattttttcaataacgaaaaagggaagctgattttcaagtaaccataaatcgtgtcttataccattatcta |
2927023 |
T |
 |
| Q |
201 |
accaaggtttaaagagaatcccaccacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaagttcatcatgaga |
300 |
Q |
| |
|
||||||||||||||||| ||| | || | | |||||||| ||||||| |||||| ||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
2927022 |
accaaggtttaaagagacacccttcgtaataggatgtccaaaaaagttgaattataaaagcggaattgattaagattaacttaacaagttcatcatgaga |
2926923 |
T |
 |
| Q |
301 |
aaatgggaaggtttcagaataacagcgtttgaaatcagataagatagat |
349 |
Q |
| |
|
|||||| | |||||| |||||||| |||||||||||||||||||||||| |
|
|
| T |
2926922 |
aaatggtagggtttcggaataacaacgtttgaaatcagataagatagat |
2926874 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 1 - 349
Target Start/End: Original strand, 3003803 - 3004145
Alignment:
| Q |
1 |
aatatcaccattatcaaaagacaattttgatttattgtaataacgaaaatacttaataacgagtacaagaaaaggagggatcctagtgttaggattacta |
100 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||| |||||| | |||| |||| |||||||| | ||||| ||||| ||||| | || |
|
|
| T |
3003803 |
aatatcacccttatcaaaatccaattttgatttattgtaataaccaaaataatgaatagtgagtttaagaaaagaatggatcatagtggtaggaacatta |
3003902 |
T |
 |
| Q |
101 |
gcatttgtaaaactgaatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatata |
200 |
Q |
| |
|
| | ||||||||| ||||||| ||||||||||||||||| ||||||||||||||||||||| ||||||| | ||||| | || || |
|
|
| T |
3003903 |
g------------tcaatgaaagactgtaaattttttcaataacgaaaaagggaagctgattttcaagtaaccataaatcgtttcttataccattatcta |
3003990 |
T |
 |
| Q |
201 |
accaaggtttaaagagaat---cccac---cacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaagttcatc |
294 |
Q |
| |
|
||||||||||||||||||| || || || || | |||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
3003991 |
accaaggtttaaagagaatgcaccgacgatcataatagtatctccaaaaaagttgaattataaaagcggaatcgattaagattaacttaacaagttcatc |
3004090 |
T |
 |
| Q |
295 |
atgagaaaatgggaaggtttcagaataacagcgtttgaaatcagataagatagat |
349 |
Q |
| |
|
|||||||||||| | |||||| |||||||| ||||||||||||||||||| |||| |
|
|
| T |
3004091 |
atgagaaaatggtagggtttcggaataacaacgtttgaaatcagataagacagat |
3004145 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 116 - 350
Target Start/End: Complemental strand, 2973960 - 2973726
Alignment:
| Q |
116 |
aatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatataaccaaggtttaaaga |
215 |
Q |
| |
|
||||||| | ||||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| | ||||||||||||||| |||| |
|
|
| T |
2973960 |
aatgaaatactgtaaattttttcaataacgaaaaagggaagctgattttcaagtaacaataaatctgatgatatatcattatataaccaaggttttaaga |
2973861 |
T |
 |
| Q |
216 |
gaatcccaccacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaagttcatcatgagaaaatgggaaggtttc |
315 |
Q |
| |
|
|| || ||||| | |||| | ||||||| ||| ||||||| |||||| ||||| |||||||||||||||||| ||||||||||| | ||||| |
|
|
| T |
2973860 |
gatcaccttcacaacaggatctcaataaatgttcaattataaaaccggaatccattaaaattaacttaacaagttcaatatgagaaaatgatagggtttt |
2973761 |
T |
 |
| Q |
316 |
agaataacagcgtttgaaatcagataagatagatg |
350 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |
|
|
| T |
2973760 |
ggaataacagcctttgaaatcagataagatagatg |
2973726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 2982916 - 2982881
Alignment:
| Q |
1 |
aatatcaccattatcaaaagacaattttgatttatt |
36 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| |
|
|
| T |
2982916 |
aatatcaccattatcaaaagacaattttgatttatt |
2982881 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 2934652 - 2934602
Alignment:
| Q |
1 |
aatatcaccattatcaaaagacaattttgatttattgtaataacgaaaata |
51 |
Q |
| |
|
||||||||| ||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
2934652 |
aatatcacccttatcaaaatccaattttgatttattgtaataaccaaaata |
2934602 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0024 (Bit Score: 69; Significance: 7e-31; HSPs: 1)
Name: scaffold0024
Description:
Target: scaffold0024; HSP #1
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 102 - 348
Target Start/End: Original strand, 35344 - 35590
Alignment:
| Q |
102 |
catttgtaaaactgaatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatataa |
201 |
Q |
| |
|
|||||||| |||| | |||||| |||||| ||||||||||||||||| |||||||||||||||||||||||||||||| || ||||| | ||| ||| |
|
|
| T |
35344 |
catttgtagaactccacgaaagaccgtaaattttttcaataacgaaaaagggaagctgattttcaagtaacaataaatctgatcttataccagcatctaa |
35443 |
T |
 |
| Q |
202 |
ccaaggtttaaagagaatcccaccacaagtgactctccaaaaatgttgaataataaaacaggaatcgattaagattaacttaacaag---ttcatcatga |
298 |
Q |
| |
|
|||||||| | || |||| | || | | |||||||| ||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||| |
|
|
| T |
35444 |
ccaaggttctagga-aatctttcttaaaata--tttccaaaaaagttgaattataaaaccggaatcgattaagattaacttaacaagttcttcatcctga |
35540 |
T |
 |
| Q |
299 |
gaaaatgggaaggtttcagaataacagcgtttgaaatcagataagataga |
348 |
Q |
| |
|
| ||||| | |||||| |||||||| | ||||||||||||||||||||| |
|
|
| T |
35541 |
ggaaatgatagggtttccgaataacaacatttgaaatcagataagataga |
35590 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 141 - 348
Target Start/End: Complemental strand, 3339091 - 3338896
Alignment:
| Q |
141 |
taacgaaaaatggaagctgattttcaagtaacaataaatctaataatatacgaacatataaccaaggtttaaagagaatcccaccacaagtgactctcca |
240 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||| || |||||| | | |||||||||||||||||| | ||||||| |
|
|
| T |
3339091 |
taacgaaaaagggaagctgattttcaagtaacaataaatctgatgatataccacctaccaaccaaggtttaaagagagacataccacaa----------- |
3339003 |
T |
 |
| Q |
241 |
aaaatgttgaataataaaacaggaatcgattaagattaacttaacaagttcatcatgagaaaatgggaaggtttcagaataacagcgtttgaaatcagat |
340 |
Q |
| |
|
||| ||||||| ||||||| ||||||||||||||||||||||||||||| ||||| |||||||| | | ||| |||||||| ||||||||||||| | |
|
|
| T |
3339002 |
-aaaagttgaattataaaaccggaatcgattaagattaacttaacaagtttatcatcagaaaatgttaggaattccgaataacaacgtttgaaatcaggt |
3338904 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 46; Significance: 4e-17; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 116 - 184
Target Start/End: Complemental strand, 49618361 - 49618292
Alignment:
| Q |
116 |
aatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagt-aacaataaatctaat |
184 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| | ||||||||||||| |||| ||||||||||||||| |
|
|
| T |
49618361 |
aatgaaagaatgtaaatattttcaataacgaaatagggaagctgattttgaagtaaacaataaatctaat |
49618292 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 8 - 184
Target Start/End: Complemental strand, 49613488 - 49613312
Alignment:
| Q |
8 |
ccattatcaaaagacaattttgatttattgtaataacgaaaatacttaataacgagtacaagaaaaggagggatcctagtgttaggattactagcatttg |
107 |
Q |
| |
|
|||||||||||| ||| ||||||| ||||||||| |||||| | || | ||| ||||||||| |||||| |||| || ||| |||||| || | |
|
|
| T |
49613488 |
ccattatcaaaacccaagtttgattgattgtaatatgcaaaataatcaaaactaagttcaagaaaagaagggattttagtcttgggaacactagcgttag |
49613389 |
T |
 |
| Q |
108 |
taaaactgaatgaaagattgtaaatattttcaataacgaaaaatggaagctgattttcaagtaacaataaatctaat |
184 |
Q |
| |
|
|| || | ||||||||||||||||| | || |||||| |||||||| | ||||||||||||||||| ||||||||| |
|
|
| T |
49613388 |
tagaagtaaatgaaagattgtaaatttcttgaataacaaaaaatggcaattgattttcaagtaacaacaaatctaat |
49613312 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 262 - 345
Target Start/End: Complemental strand, 49618196 - 49618113
Alignment:
| Q |
262 |
ggaatcgattaagattaacttaacaagttcatcatgagaaaatgggaaggtttcagaataacagcgtttgaaatcagataagat |
345 |
Q |
| |
|
|||||| ||||||||||||||||||| ||||||||||| |||| | | ||||| |||||| || | ||||||| ||||||||| |
|
|
| T |
49618196 |
ggaatcaattaagattaacttaacaaattcatcatgagtaaattgtagggttttggaataagagtgattgaaatgagataagat |
49618113 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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