View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7716_low_11 (Length: 251)
Name: NF7716_low_11
Description: NF7716
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7716_low_11 |
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Alignment Details
Target: chr8 (Bit Score: 226; Significance: 1e-125; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 226; E-Value: 1e-125
Query Start/End: Original strand, 1 - 230
Target Start/End: Original strand, 42495409 - 42495638
Alignment:
| Q |
1 |
attctaatctcctgtttttgcaaatcaagttcttaatcctatcaattctacaacgagtcatcactcaactgaacataatagtacgtcattcaaatgaaca |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
42495409 |
attctaatctcctgtttttgcaaatcaagttcttaatcctatcaattctacaacgagtcatcactcaactgaacataatagtatgtcattcaaatgaaca |
42495508 |
T |
|
| Q |
101 |
acaattatatatatttgggaagaaaaaaggatacatcttcaacaacatttagtgtgcgatcaagccactgaaaatgaactagtccctcctcaccctgaga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42495509 |
acaattatatatatttgggaagaaaaaaggatacatcttcaacaacatttagtgtgcgatcaagccactgaaaatgaactagtccctcctcaccctgaga |
42495608 |
T |
|
| Q |
201 |
caaaaacaatcacttcaacaatggaaattc |
230 |
Q |
| |
|
|||||||||||||||||||||||||||||| |
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| T |
42495609 |
caaaaacaatcacttcaacaatggaaattc |
42495638 |
T |
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