View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7717_low_4 (Length: 389)

Name: NF7717_low_4
Description: NF7717
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7717_low_4
NF7717_low_4
[»] chr3 (59 HSPs)
chr3 (3-371)||(44826658-44827032)
chr3 (70-255)||(44582804-44582989)
chr3 (5-57)||(42888766-42888818)
chr3 (5-68)||(21481778-21481841)
chr3 (5-54)||(38471670-38471719)
chr3 (5-57)||(17118422-17118474)
chr3 (5-57)||(30664528-30664580)
chr3 (5-57)||(48205070-48205122)
chr3 (5-68)||(48490507-48490573)
chr3 (5-68)||(2935505-2935568)
chr3 (5-56)||(33971909-33971960)
chr3 (5-68)||(47484290-47484357)
chr3 (5-54)||(2280205-2280254)
chr3 (5-54)||(14847512-14847561)
chr3 (5-57)||(9159030-9159082)
chr3 (5-53)||(16295493-16295541)
chr3 (5-68)||(29057659-29057725)
chr3 (5-68)||(35368622-35368688)
chr3 (5-57)||(36301202-36301254)
chr3 (5-57)||(44689828-44689880)
chr3 (7-53)||(45711435-45711482)
chr3 (6-52)||(29525263-29525309)
chr3 (5-54)||(38296656-38296705)
chr3 (5-57)||(7351632-7351684)
chr3 (5-53)||(9557916-9557964)
chr3 (5-57)||(14839039-14839091)
chr3 (5-68)||(29846885-29846951)
chr3 (5-68)||(50745560-50745626)
chr3 (5-52)||(1402680-1402727)
chr3 (7-53)||(20547986-20548033)
chr3 (7-53)||(26014840-26014887)
chr3 (7-53)||(27541498-27541545)
chr3 (5-68)||(31300816-31300879)
chr3 (17-52)||(38944147-38944182)
chr3 (7-53)||(41505519-41505566)
chr3 (7-53)||(44413916-44413963)
chr3 (14-68)||(44592982-44593034)
chr3 (5-52)||(44972732-44972779)
chr3 (5-52)||(51032618-51032665)
chr3 (7-52)||(6178421-6178467)
chr3 (5-70)||(23553770-23553836)
chr3 (11-57)||(29555838-29555884)
chr3 (5-50)||(44910729-44910774)
chr3 (15-52)||(48944714-48944751)
chr3 (7-52)||(49761182-49761227)
chr3 (5-53)||(622454-622502)
chr3 (5-53)||(1261369-1261417)
chr3 (5-41)||(8627898-8627934)
chr3 (9-52)||(8846521-8846565)
chr3 (5-53)||(9027642-9027690)
chr3 (1-41)||(28625270-28625310)
chr3 (5-41)||(41369638-41369674)
chr3 (5-68)||(43149337-43149403)
chr3 (5-53)||(44334795-44334843)
chr3 (274-310)||(44582643-44582679)
chr3 (5-52)||(45293022-45293070)
chr3 (5-68)||(49361829-49361895)
chr3 (9-52)||(51343438-51343482)
chr3 (5-57)||(55264842-55264894)
[»] chr4 (54 HSPs)
chr4 (70-370)||(7181501-7181808)
chr4 (5-68)||(8614190-8614253)
chr4 (5-68)||(32294754-32294817)
chr4 (5-73)||(46686240-46686310)
chr4 (7-57)||(53781833-53781883)
chr4 (3-54)||(28134400-28134451)
chr4 (7-53)||(37297077-37297124)
chr4 (5-47)||(9095972-9096014)
chr4 (11-57)||(18944304-18944350)
chr4 (5-74)||(37731920-37731992)
chr4 (5-54)||(1987707-1987756)
chr4 (5-54)||(4577585-4577634)
chr4 (5-50)||(34537962-34538007)
chr4 (3-52)||(46791983-46792032)
chr4 (5-50)||(55960732-55960777)
chr4 (5-68)||(1868887-1868953)
chr4 (5-57)||(4877992-4878044)
chr4 (5-68)||(8848711-8848777)
chr4 (5-68)||(9827977-9828043)
chr4 (5-68)||(24310515-24310581)
chr4 (5-57)||(29577430-29577482)
chr4 (5-53)||(35037638-35037686)
chr4 (5-61)||(44539315-44539371)
chr4 (5-57)||(48650250-48650302)
chr4 (5-57)||(50291307-50291359)
chr4 (3-68)||(1580275-1580342)
chr4 (7-53)||(10250511-10250558)
chr4 (7-53)||(36177934-36177981)
chr4 (5-52)||(36364779-36364826)
chr4 (5-52)||(41609673-41609720)
chr4 (5-52)||(43982927-43982974)
chr4 (5-52)||(48722099-48722146)
chr4 (7-52)||(2268503-2268549)
chr4 (14-52)||(5208330-5208368)
chr4 (11-68)||(31413786-31413846)
chr4 (7-41)||(40348835-40348869)
chr4 (3-41)||(52911781-52911819)
chr4 (19-52)||(7037492-7037525)
chr4 (5-54)||(26442384-26442433)
chr4 (5-54)||(41170801-41170849)
chr4 (12-57)||(46355294-46355339)
chr4 (7-52)||(52456923-52456968)
chr4 (5-53)||(1688422-1688470)
chr4 (5-53)||(6093601-6093649)
chr4 (5-68)||(7795025-7795091)
chr4 (14-50)||(31240680-31240716)
chr4 (5-52)||(31574933-31574981)
chr4 (5-53)||(36081828-36081876)
chr4 (5-57)||(36110159-36110211)
chr4 (5-53)||(37775421-37775469)
chr4 (5-57)||(38960654-38960706)
chr4 (5-41)||(39606008-39606044)
chr4 (5-41)||(53357071-53357107)
chr4 (5-41)||(55996463-55996499)
[»] chr7 (41 HSPs)
chr7 (86-370)||(34825718-34826007)
chr7 (129-249)||(8290333-8290443)
chr7 (5-68)||(33465033-33465099)
chr7 (11-57)||(45335887-45335933)
chr7 (5-54)||(28548215-28548264)
chr7 (5-54)||(30538654-30538703)
chr7 (5-57)||(640417-640469)
chr7 (5-57)||(1709309-1709361)
chr7 (5-53)||(37969960-37970008)
chr7 (5-57)||(41910179-41910231)
chr7 (5-57)||(47945008-47945060)
chr7 (5-57)||(47950438-47950490)
chr7 (5-57)||(48639377-48639429)
chr7 (5-68)||(49142511-49142577)
chr7 (7-53)||(47379605-47379651)
chr7 (5-54)||(2600528-2600577)
chr7 (265-310)||(8290564-8290609)
chr7 (5-54)||(41458894-41458943)
chr7 (5-57)||(17039182-17039234)
chr7 (5-57)||(27704460-27704512)
chr7 (5-68)||(27866531-27866597)
chr7 (5-53)||(41030312-41030360)
chr7 (5-57)||(41538507-41538559)
chr7 (7-68)||(43942649-43942712)
chr7 (7-53)||(30941414-30941461)
chr7 (14-57)||(34349030-34349073)
chr7 (6-57)||(40207795-40207846)
chr7 (5-47)||(29923706-29923748)
chr7 (7-52)||(34108850-34108896)
chr7 (7-52)||(40854650-40854696)
chr7 (9-54)||(11789689-11789734)
chr7 (26-55)||(35491426-35491455)
chr7 (5-53)||(38073224-38073273)
chr7 (9-54)||(38197689-38197734)
chr7 (5-50)||(39415450-39415495)
chr7 (5-57)||(19933885-19933937)
chr7 (5-57)||(19965024-19965076)
chr7 (5-68)||(24380715-24380781)
chr7 (5-68)||(25272602-25272668)
chr7 (5-53)||(35212949-35212997)
chr7 (5-68)||(40108135-40108201)
[»] chr6 (18 HSPs)
chr6 (86-254)||(33658935-33659108)
chr6 (5-68)||(22422164-22422227)
chr6 (3-68)||(17442833-17442901)
chr6 (5-68)||(9395331-9395397)
chr6 (5-57)||(12151851-12151903)
chr6 (5-68)||(15974621-15974685)
chr6 (6-53)||(34047415-34047463)
chr6 (7-53)||(25811834-25811881)
chr6 (5-52)||(27175987-27176034)
chr6 (3-57)||(6997542-6997596)
chr6 (5-53)||(5570327-5570376)
chr6 (16-57)||(34792047-34792088)
chr6 (5-68)||(2165294-2165360)
chr6 (5-68)||(2176927-2176993)
chr6 (5-68)||(16121163-16121229)
chr6 (5-68)||(25567484-25567550)
chr6 (5-57)||(27790229-27790281)
chr6 (5-68)||(32135425-32135491)
[»] chr5 (33 HSPs)
chr5 (5-68)||(17574218-17574281)
chr5 (11-68)||(9940070-9940127)
chr5 (5-54)||(29765858-29765907)
chr5 (5-57)||(3031859-3031911)
chr5 (5-57)||(14522958-14523010)
chr5 (5-57)||(25585450-25585502)
chr5 (5-68)||(43153054-43153120)
chr5 (5-68)||(5386084-5386147)
chr5 (3-53)||(1108010-1108060)
chr5 (5-68)||(8442170-8442236)
chr5 (5-68)||(12203158-12203224)
chr5 (5-57)||(18729283-18729335)
chr5 (5-57)||(20985523-20985575)
chr5 (5-57)||(30103445-30103497)
chr5 (5-57)||(34693210-34693262)
chr5 (5-57)||(39032598-39032650)
chr5 (7-53)||(22649657-22649704)
chr5 (5-64)||(24329976-24330035)
chr5 (5-47)||(7080565-7080607)
chr5 (7-52)||(18660788-18660834)
chr5 (5-47)||(22653690-22653732)
chr5 (7-41)||(42211560-42211594)
chr5 (5-54)||(10469941-10469990)
chr5 (16-68)||(32732123-32732178)
chr5 (17-50)||(38010904-38010937)
chr5 (5-46)||(42364465-42364506)
chr5 (5-52)||(611894-611942)
chr5 (5-68)||(8725416-8725482)
chr5 (5-52)||(9168158-9168206)
chr5 (5-57)||(12891090-12891142)
chr5 (16-52)||(27440509-27440545)
chr5 (5-53)||(37821119-37821167)
chr5 (5-68)||(40201114-40201180)
[»] chr2 (51 HSPs)
chr2 (129-255)||(21870761-21870876)
chr2 (5-68)||(35008095-35008158)
chr2 (5-68)||(43205107-43205170)
chr2 (5-55)||(17999773-17999823)
chr2 (11-68)||(1096343-1096400)
chr2 (11-57)||(30340018-30340064)
chr2 (265-310)||(21870990-21871035)
chr2 (11-68)||(23141367-23141424)
chr2 (11-68)||(23553157-23553214)
chr2 (5-54)||(40721799-40721848)
chr2 (5-68)||(22296123-22296189)
chr2 (5-47)||(3366064-3366106)
chr2 (3-57)||(5852499-5852553)
chr2 (5-54)||(11728115-11728164)
chr2 (5-54)||(20247861-20247910)
chr2 (5-68)||(6885474-6885540)
chr2 (5-57)||(12256926-12256978)
chr2 (5-68)||(24727426-24727492)
chr2 (5-57)||(27529554-27529606)
chr2 (5-57)||(28679153-28679205)
chr2 (5-57)||(38027609-38027661)
chr2 (5-68)||(38724312-38724378)
chr2 (5-68)||(40115526-40115592)
chr2 (5-52)||(4723596-4723643)
chr2 (5-60)||(16463312-16463367)
chr2 (7-53)||(18254205-18254252)
chr2 (5-68)||(24361505-24361568)
chr2 (5-67)||(24491671-24491738)
chr2 (5-47)||(13850178-13850220)
chr2 (5-39)||(17917432-17917466)
chr2 (5-47)||(34373040-34373082)
chr2 (7-52)||(41195613-41195659)
chr2 (5-53)||(6511279-6511328)
chr2 (5-46)||(19523395-19523436)
chr2 (5-54)||(25094380-25094429)
chr2 (3-52)||(31635802-31635851)
chr2 (5-54)||(43514920-43514969)
chr2 (5-53)||(546379-546427)
chr2 (5-53)||(6666049-6666097)
chr2 (5-41)||(6842551-6842587)
chr2 (5-53)||(7497985-7498033)
chr2 (7-68)||(9647144-9647207)
chr2 (7-58)||(9990714-9990766)
chr2 (5-57)||(12208467-12208519)
chr2 (5-57)||(18749357-18749409)
chr2 (13-57)||(19637254-19637298)
chr2 (13-57)||(19835847-19835891)
chr2 (5-68)||(27538910-27538976)
chr2 (5-53)||(42554805-42554853)
chr2 (5-57)||(44897651-44897703)
chr2 (5-68)||(45202126-45202192)
[»] chr1 (49 HSPs)
chr1 (11-68)||(48689570-48689627)
chr1 (5-68)||(29094740-29094803)
chr1 (5-54)||(11897202-11897251)
chr1 (5-57)||(5574253-5574305)
chr1 (5-68)||(11121492-11121558)
chr1 (5-57)||(40118709-40118761)
chr1 (5-57)||(48390071-48390123)
chr1 (5-68)||(12972698-12972761)
chr1 (7-52)||(12999818-12999863)
chr1 (5-54)||(27787517-27787566)
chr1 (5-54)||(48962014-48962063)
chr1 (5-57)||(1100242-1100294)
chr1 (5-57)||(12990463-12990515)
chr1 (5-68)||(30414875-30414941)
chr1 (5-68)||(48256920-48256984)
chr1 (7-53)||(649797-649844)
chr1 (5-52)||(2854954-2855001)
chr1 (17-68)||(5383773-5383824)
chr1 (5-64)||(21854458-21854517)
chr1 (14-57)||(22674737-22674780)
chr1 (7-53)||(37685359-37685406)
chr1 (7-53)||(37700112-37700159)
chr1 (5-64)||(43105123-43105182)
chr1 (5-52)||(44672024-44672071)
chr1 (5-68)||(46903481-46903547)
chr1 (5-67)||(50460706-50460771)
chr1 (5-47)||(2827704-2827746)
chr1 (11-68)||(16252759-16252819)
chr1 (5-54)||(6396355-6396404)
chr1 (5-54)||(31666198-31666247)
chr1 (5-46)||(37947214-37947255)
chr1 (5-68)||(644701-644767)
chr1 (17-53)||(3291431-3291467)
chr1 (7-50)||(3851189-3851233)
chr1 (5-53)||(8464507-8464555)
chr1 (5-41)||(15470050-15470086)
chr1 (5-53)||(23399983-23400031)
chr1 (7-50)||(29359670-29359714)
chr1 (5-57)||(31244727-31244779)
chr1 (5-68)||(31433502-31433568)
chr1 (5-53)||(33422213-33422261)
chr1 (5-68)||(35030756-35030822)
chr1 (7-50)||(37619575-37619619)
chr1 (5-53)||(39815375-39815423)
chr1 (5-68)||(45272154-45272220)
chr1 (1-52)||(47215718-47215770)
chr1 (5-53)||(48336433-48336480)
chr1 (3-47)||(51727992-51728036)
chr1 (5-53)||(52417560-52417608)
[»] chr8 (35 HSPs)
chr8 (5-57)||(4148649-4148701)
chr8 (5-57)||(34838264-34838316)
chr8 (5-57)||(27300371-27300423)
chr8 (11-57)||(21649168-21649214)
chr8 (5-54)||(5742651-5742700)
chr8 (5-50)||(32674226-32674271)
chr8 (5-50)||(37784368-37784413)
chr8 (5-50)||(40459756-40459801)
chr8 (5-68)||(6243045-6243111)
chr8 (5-68)||(13924022-13924088)
chr8 (5-57)||(22203209-22203261)
chr8 (5-53)||(22836133-22836181)
chr8 (5-57)||(35701821-35701873)
chr8 (5-68)||(37294607-37294671)
chr8 (5-68)||(38939183-38939249)
chr8 (5-52)||(9048310-9048357)
chr8 (7-53)||(22719468-22719515)
chr8 (7-53)||(31249520-31249567)
chr8 (5-52)||(43605647-43605694)
chr8 (11-68)||(41776186-41776246)
chr8 (5-54)||(28156231-28156280)
chr8 (11-68)||(35967406-35967463)
chr8 (5-69)||(37471653-37471720)
chr8 (12-57)||(42688452-42688497)
chr8 (5-41)||(7559359-7559395)
chr8 (5-41)||(7678773-7678809)
chr8 (9-52)||(9549196-9549240)
chr8 (5-41)||(9738687-9738723)
chr8 (5-68)||(14233638-14233704)
chr8 (5-57)||(18550004-18550056)
chr8 (5-57)||(23709001-23709053)
chr8 (5-41)||(24616363-24616399)
chr8 (5-68)||(25430657-25430723)
chr8 (5-41)||(35818978-35819014)
chr8 (5-53)||(44001085-44001133)
[»] scaffold0014 (1 HSPs)
scaffold0014 (3-57)||(145086-145140)
[»] scaffold0514 (1 HSPs)
scaffold0514 (5-57)||(1839-1891)
[»] scaffold0131 (1 HSPs)
scaffold0131 (5-52)||(15528-15575)
[»] scaffold0276 (1 HSPs)
scaffold0276 (7-68)||(1658-1720)
[»] scaffold0024 (1 HSPs)
scaffold0024 (5-57)||(48679-48731)
[»] scaffold0592 (1 HSPs)
scaffold0592 (5-47)||(945-987)
[»] scaffold0018 (1 HSPs)
scaffold0018 (9-46)||(48221-48258)
[»] scaffold0508 (1 HSPs)
scaffold0508 (5-41)||(11530-11566)
[»] scaffold0286 (1 HSPs)
scaffold0286 (5-68)||(17049-17115)
[»] scaffold0058 (1 HSPs)
scaffold0058 (11-47)||(2978-3014)


Alignment Details
Target: chr3 (Bit Score: 302; Significance: 1e-170; HSPs: 59)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 3 - 371
Target Start/End: Complemental strand, 44827032 - 44826658
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctccttttccaaatataaataaaagtaagcacataaa 102  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44827032 ataataaaaagataatgtgagtttgagagaaaaaattgtacaaaagttgtacaaatataatttctccttttccaaatataaataaaagtaagcacataaa 44826933  T
Q  103 ttttcatgtttttcatgattct---gt---tcgacaatattaatttagaagtataattagataaataattaatacaaaattaaaaaagcaatatgatatt 196  Q
    |||||||||||||||||||||    ||   | |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  44826932 ttttcatgtttttcatgattcaaaagtatgtagacaatattaatttagaagtataattagatcaataattaatacaaaattaaaaaagcaatatgatatt 44826833  T
Q  197 tattttagacatttttatatgataaattgatgatccacaataattttagaatggatattgtnnnnnnngagaatgaatgaaataaacaaaaatgatttgt 296  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||    
T  44826832 tattttagacatttttatatgacaaattgatgatccacaataattttagaatggatatagtaaaaaaagagaatgaatgaaataaacaaaaatgatttgt 44826733  T
Q  297 tgagtattatatgaactagttttggatgaacacaatacaagggtacactcacatatttgagaaaaactgtgtaag 371  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44826732 tgagtattatatgaactagttttggatgaacacaatacaagggtacactcacatatttgagaaaaactgtgtaag 44826658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 70 - 255
Target Start/End: Complemental strand, 44582989 - 44582804
Alignment:
Q  70 ttttccaaatataaataaaagtaagcacataaattttcatgtttttcatgattc-----tgt----tcgacaatattaatttagaagtataattagataa 160  Q
    ||||| ||| ||||| ||||  |||||||||||||||||||| |||||||||||     |||    | |||||||||||| ||||||||| |||||||||    
T  44582989 ttttcaaaaaataaacaaaaacaagcacataaattttcatgtctttcatgattcaaaaatgtggactagacaatattaatatagaagtatgattagataa 44582890  T
Q  161 ataattaatacaaaattaaaaaagcaatatgatatttattttagacatttttatatgataaattgatgatccacaataattttagaatggatatt 255  Q
    |||||||||| ||||    ||||     |||||||||||||||||| ||||||||||||||||||||  |||||||||||| ||||||| |||||    
T  44582889 ataattaatataaaa----aaaa-----atgatatttattttagacttttttatatgataaattgatactccacaataattctagaatgaatatt 44582804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 42888766 - 42888818
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||    
T  42888766 aataaaaagataatgtaagtatgagagagaaaattgtacaaaagttgtacaaa 42888818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 21481841 - 21481778
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||| ||| ||||||||||||||||||||||| |||||||    
T  21481841 aataagaagataatgtgagtatgagagaaaaagttgtacaaaagttgtacaaatatcatttctc 21481778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 38471719 - 38471670
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| |||||||||||||||||||||||||||||    
T  38471719 aataaaaacataatgtgagtatgagagagaaaattgtacaaaagttgtac 38471670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 17118474 - 17118422
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||| ||||||||||||||||||||||||    
T  17118474 aataataagataatgtgagtatgagagaaaaaattgtacaaaagttgtacaaa 17118422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 30664580 - 30664528
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  30664580 aataagaagataatgtgagtatgagagagaaagttgtacaaaagttgtacaaa 30664528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 48205122 - 48205070
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||||||||| |||||||||||||||||||||| || ||||||    
T  48205122 aataaaaagataatgtgagtatgagagagaaaattgtacaaaaattatacaaa 48205070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 48490507 - 48490573
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    |||||||||||||||||||| ||||||||||| ||||||||||   ||||||||||||| |||||||    
T  48490507 aataaaaagataatgtgagtatgagagagaaagttgtacaaaagtggttgtacaaatatcatttctc 48490573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 2935505 - 2935568
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||| ||||||| ||||||||||||| ||||||||| |||||||    
T  2935505 aataagaagataatgtgagtatgaaagagaaagttgtacaaaagttatacaaatattatttctc 2935568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 56
Target Start/End: Complemental strand, 33971960 - 33971909
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaa 56  Q
    ||||| |||||||||||||| ||||||| |||||||||||||||||||||||    
T  33971960 aataagaagataatgtgagtatgagagataaaattgtacaaaagttgtacaa 33971909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 47484357 - 47484290
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa----gttgtacaaatataatttctc 68  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    ||||||||||||| |||||||    
T  47484357 aataaaaagataatgtgagtatgagagaaaaaattgtacaaaaaatggttgtacaaatatcatttctc 47484290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 2280254 - 2280205
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  2280254 aataaaaacataatgtgagtgtgagagagaaagttgtacaaaagttgtac 2280205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 14847512 - 14847561
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  14847512 aataaaaacataatgtgagtatgagagagaaaattatacaaaagttgtac 14847561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 9159030 - 9159082
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||| |||||||||||||||||| |||||||||    
T  9159030 aataagaagataatgtgagtatgaaagagaaaattgtacaaaaattgtacaaa 9159082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 16295541 - 16295493
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  16295541 aataaaaatataatgtgagtatgagagagaaagttgtacaaaagttgta 16295493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 29057725 - 29057659
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||   ||||||||||||| |||||||    
T  29057725 aataagaagataatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctc 29057659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 35368688 - 35368622
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||| |||||||||   |||||||||||||| |||||||    
T  35368688 aataagaagataatgtgagtatgagagagaaagttgtacaaaaatagttgtacaaatatcatttctc 35368622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 36301202 - 36301254
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||| ||||||||||  ||||||||||| ||||||||||||||||||||    
T  36301202 aataaaaacataatgtgagcatgagagagaaagttgtacaaaagttgtacaaa 36301254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 44689880 - 44689828
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||| || |||||||||||||||||||||    
T  44689880 aataagaagataatgtgagtatgagagaaaagattgtacaaaagttgtacaaa 44689828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 45711435 - 45711482
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  45711435 taaaaagataatgtgagtatgagagagaaaattgtcacaaaagttgta 45711482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 6 - 52
Target Start/End: Complemental strand, 29525309 - 29525263
Alignment:
Q  6 ataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||| |||||||||||||| |||||||||| ||||||||||||||||    
T  29525309 ataagaagataatgtgagtatgagagagaatattgtacaaaagttgt 29525263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 38296656 - 38296705
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||| ||| | |||||||||||||||||||||||||||||    
T  38296656 aataaaaacataatatgaatatgagagagaaaattgtacaaaagttgtac 38296705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 7351632 - 7351684
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||| ||||| |||||||||||||||||||||| || ||||||    
T  7351632 aataagaagataatatgagtatgagagagaaaattgtacaaaaattatacaaa 7351684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 9557916 - 9557964
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| |||||||||| |||||    
T  9557916 aataaaaacataatgtgagtatgagagagaaagttgtacaaaaattgta 9557964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 14839039 - 14839091
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| || |||||||  ||||||||||||||||||||    
T  14839039 aataagaagataatgtgagtatgggagagaaggttgtacaaaagttgtacaaa 14839091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 29846885 - 29846951
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| || ||||||||||| ||||||||||| ||||||||||   ||||||||||||| |||||||    
T  29846885 aataagaatataatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctc 29846951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 50745626 - 50745560
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||    |||||||||||| |||||||    
T  50745626 aataagaagataatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcatttctc 50745560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 1402727 - 1402680
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||| |||||||||||||| ||||||||||  |||||||||||||||    
T  1402727 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttgt 1402680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 20547986 - 20548033
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    ||||||||||| |||||| |||||||||||||||| ||||||||||||    
T  20547986 taaaaagataacgtgagtatgagagagaaaattgtcacaaaagttgta 20548033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 26014887 - 26014840
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  26014887 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 26014840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 27541498 - 27541545
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| |||||||||||||||| || |||||||||    
T  27541498 taaaaagataatgtgagtatgagagagaaaattgtcactaaagttgta 27541545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 31300879 - 31300816
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| || ||||| ||||| ||||||||||| ||||  ||||||||||||||||| |||||||    
T  31300879 aataataacataatatgagtatgagagagaaagttgtctaaaagttgtacaaatatcatttctc 31300816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 52
Target Start/End: Original strand, 38944147 - 38944182
Alignment:
Q  17 atgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||||| |||||||||||||||||||||||||||    
T  38944147 atgtgagtatgagagagaaaattgtacaaaagttgt 38944182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 41505566 - 41505519
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  41505566 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 41505519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 44413916 - 44413963
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  44413916 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 44413963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 68
Target Start/End: Complemental strand, 44593034 - 44592982
Alignment:
Q  14 ataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| ||||| |||||||||||||| ||  ||||||||||||||||||||||||    
T  44593034 ataatatgagtatgagagagaaaattcta--aaagttgtacaaatataatttctc 44592982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 44972779 - 44972732
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||||| ||||||||||| ||||||| ||| |||||||||||||||    
T  44972779 aataaaaatataatgtgagtatgagagataaagttgtacaaaagttgt 44972732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 51032618 - 51032665
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||| |||||||||||||| ||||||||||||||||  |||||||||    
T  51032618 aataagaagataatgtgagtatgagagagaaaattgtcaaaaagttgt 51032665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 6178421 - 6178467
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||    
T  6178421 taaaaacataatgtgagtatgagagagaaaattgtcacaaaagttgt 6178467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 70
Target Start/End: Original strand, 23553770 - 23553836
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgtacaaatataatttctcct 70  Q
    |||||||| | |||| |||| ||||||||||| |||| ||||||||||| ||||||| |||||||||    
T  23553770 aataaaaatagaatgagagtatgagagagaaagttgtcacaaaagttgttcaaatatcatttctcct 23553836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 29555838 - 29555884
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||| ||||||||||  ||||||||||||| ||||||    
T  29555838 aagataatgtgagtatgagagagaaggttgtacaaaagttatacaaa 29555884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 44910774 - 44910729
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagtt 50  Q
    |||| ||||||||||||||| |||||||||| ||| ||||||||||    
T  44910774 aatataaagataatgtgagtatgagagagaagattatacaaaagtt 44910729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 52
Target Start/End: Original strand, 48944714 - 48944751
Alignment:
Q  15 taatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||| ||||| |||||||||||||||||||||||||||    
T  48944714 taatatgagtatgagagagaaaattgtacaaaagttgt 48944751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 49761182 - 49761227
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||| ||||||||||| ||||||||||| |||||||||| ||||    
T  49761182 taaaaatataatgtgagtgtgagagagaaagttgtacaaaaattgt 49761227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 622454 - 622502
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| ||||  ||||||||||    
T  622454 aataaaaatataatgtgagtatgagagagaaagttgtcaaaaagttgta 622502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 1261369 - 1261417
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||| ||||||| |||||||||| |||||    
T  1261369 aataaaaacataatgtgagtatgaaagagaaagttgtacaaaaattgta 1261417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 8627934 - 8627898
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  8627934 aataagaagataatgtgagtatgagagagaaaattgt 8627898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 8846565 - 8846521
Alignment:
Q  9 aaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||    
T  8846565 aaaaaataatgtgagtatgagagagaaaattgtcacaaaagttgt 8846521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 9027690 - 9027642
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| |||||||||||||| | ||||| ||| ||||||||||||||||    
T  9027690 aataagaagataatgtgagtatcagagataaagttgtacaaaagttgta 9027642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 28625270 - 28625310
Alignment:
Q  1 aaataataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    ||||| |||||| ||||||||||| ||||||||||||||||    
T  28625270 aaatagtaaaaacataatgtgagtatgagagagaaaattgt 28625310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 41369674 - 41369638
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    ||||| |||||||||||||||||||||||||| ||||    
T  41369674 aataagaagataatgtgagtttgagagagaaagttgt 41369638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 43149337 - 43149403
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||| ||||| |||||||||   |||||||||||||  |||||||    
T  43149337 aataagaagataatgtgagtatgagaaagaaagttgtacaaaaatagttgtacaaataacatttctc 43149403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 44334795 - 44334843
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| ||||  ||||||||||    
T  44334795 aataaaaatataatgtgagtatgagagagaaagttgtcaaaaagttgta 44334843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 274 - 310
Target Start/End: Complemental strand, 44582679 - 44582643
Alignment:
Q  274 tgaaataaacaaaaatgatttgttgagtattatatga 310  Q
    |||||||| | ||||||||||||||||||||||||||    
T  44582679 tgaaataagctaaaatgatttgttgagtattatatga 44582643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 45293022 - 45293070
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||||||| ||||||||||| ||||||||||| |||| |||||||||||    
T  45293022 aataaaaatataatgtgagtatgagagagaaagttgtcacaaaagttgt 45293070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 49361829 - 49361895
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||| ||| ||||||||||    |||||||||||| |||||||    
T  49361829 aataagaagataatgtgagtatgagagaaaaagttgtacaaaaatgattgtacaaatatcatttctc 49361895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Complemental strand, 51343482 - 51343438
Alignment:
Q  9 aaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||||||||||| ||| |||||||||||||||| |||||||||||    
T  51343482 aaaagataatgtaagtatgagagagaaaattgtcacaaaagttgt 51343438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 55264894 - 55264842
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||||| ||| ||||| |||| |||||| ||||||| ||||||    
T  55264894 aataaaaagataatgtaagtatgagaaagaagattgtataaaagttatacaaa 55264842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 207; Significance: 1e-113; HSPs: 54)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 70 - 370
Target Start/End: Original strand, 7181501 - 7181808
Alignment:
Q  70 ttttccaaatataaataaaagtaagcacataaattttcatgtttttcatgattct---gt---tcgacaatattaatttagaagtataattagataaata 163  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    ||   | || ||||||||||||||||| ||||||||||||||    
T  7181501 ttttccaaatataaataaaagtaagcacataaattttcatgtttttcatgattcaaaagtatgtagaaaatattaatttagaagtgtaattagataaata 7181600  T
Q  164 attaatacaaaattaaaaaagcaatatgatatttattttagacatttttatatgataaattgatgatccacaataattttagaatggatattgtnnnnnn 263  Q
    ||||||| ||||||||||||| || |||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| ||          
T  7181601 attaatataaaattaaaaaaggaaaatgatatttattttagacatttttatttgacaaattgatgatccacaataattttagaatggatatagtaaaaaa 7181700  T
Q  264 n-gagaatgaatgaaataaacaaaaatgatttgttgagtattatatgaactagttttggatgaacacaatacaagggtacactcacatatttgagaaaaa 362  Q
      |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7181701 aagagaatgaatgaaataaacaaaaatgatttgttgagtattatttgaactagttttggatgaacacaatacaagggtacactcacatatttgagaaaaa 7181800  T
Q  363 ctgtgtaa 370  Q
    ||||||||    
T  7181801 ctgtgtaa 7181808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 8614253 - 8614190
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| || ||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||    
T  8614253 aataagaaaataatgtgagtatgagagagaaggttgtacaaaagttgtacaaatatcatttctc 8614190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 32294754 - 32294817
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||| ||||||||| |||||||    
T  32294754 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttatacaaatatcatttctc 32294817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 5 - 73
Target Start/End: Complemental strand, 46686310 - 46686240
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa--gttgtacaaatataatttctcctttt 73  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||  ||||||||||||| ||||||| ||||    
T  46686310 aataaaaacataatgtgagtatgagagagaaagttgtacaaaatggttgtacaaatatcatttctcttttt 46686240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 7 - 57
Target Start/End: Original strand, 53781833 - 53781883
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||||||| ||| ||||||||||||| ||||||||||||||    
T  53781833 taaaaagataatgtgagtatgaaagagaaaattgtataaaagttgtacaaa 53781883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 28134451 - 28134400
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||||| ||||||||| | || ||||||||||||||||||||||||||    
T  28134451 ataataaaaacataatgtgaatatgggagagaaaattgtacaaaagttgtac 28134400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 37297124 - 37297077
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||    
T  37297124 taaaaagataatgtgagtatgagagagaaaattgtcacaaaagttgta 37297077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 9096014 - 9095972
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    ||||| |||||||||||||| ||||||||||||||||||||||    
T  9096014 aataagaagataatgtgagtatgagagagaaaattgtacaaaa 9095972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 18944350 - 18944304
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  18944350 aagataatgtgagtatgagagagaaggttgtacaaaagttgtacaaa 18944304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 74
Target Start/End: Complemental strand, 37731992 - 37731920
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctccttttc 74  Q
    |||||||| ||||||||||| ||||||||||| |||||| |||    |||||||||||| |||||||||||||    
T  37731992 aataaaaacataatgtgagtatgagagagaaagttgtaccaaaatgattgtacaaatatcatttctccttttc 37731920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 1987707 - 1987756
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||||||||| ||||||    
T  1987707 aataaaaacataatgtgagtgtgagagagaaagttgtacaaaaattgtac 1987756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 4577634 - 4577585
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    ||||| |||||||||||||| ||||||||||| |||||||||| ||||||    
T  4577634 aataagaagataatgtgagtatgagagagaaagttgtacaaaaattgtac 4577585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 34538007 - 34537962
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagtt 50  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||    
T  34538007 aataaaaacataatgtgagtatgagagagaaagttgtacaaaagtt 34537962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 46791983 - 46792032
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||||| |||||||||||||| ||||| |||||||||||||||| ||||    
T  46791983 ataataagaagataatgtgagtatgagaaagaaaattgtacaaaaattgt 46792032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 55960777 - 55960732
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagtt 50  Q
    |||||||| |||||| |||| |||||||||||||||||||||||||    
T  55960777 aataaaaacataatgcgagtatgagagagaaaattgtacaaaagtt 55960732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 1868887 - 1868953
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||   ||||||||||||| |||||||    
T  1868887 aataagaagataatgtgagtatgagatagaaagttgtacaaaaatggttgtacaaatatcatttctc 1868953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 4878044 - 4877992
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||| ||||| ||||||||||  ||||||||||||||||||||    
T  4878044 aataagaagataatatgagtatgagagagaaggttgtacaaaagttgtacaaa 4877992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 8848777 - 8848711
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| | ||||||||||||||| ||||   ||||||||||||| |||||||    
T  8848777 aataagaagataatgtgagtgtaagagagaaaattgtataaaatttgttgtacaaatatcatttctc 8848711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 9827977 - 9828043
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    |||||||| ||||||||||| ||||||||||| |||||| |||   ||||||||||||| |||||||    
T  9827977 aataaaaacataatgtgagtgtgagagagaaagttgtactaaaatggttgtacaaatatcatttctc 9828043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 24310515 - 24310581
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||| ||||||||| ||||||||||| ||||||||||   ||||||||||||| |||||||    
T  24310515 aataagaagaaaatgtgagtatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctc 24310581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 29577430 - 29577482
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||| ||||| |||||||||| |||||||||    
T  29577430 aataagaagataatgtgagtatgagaaagaaagttgtacaaaaattgtacaaa 29577482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 35037686 - 35037638
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||| | |||||||||| |||||||||||||||||    
T  35037686 aataaaaacataatgtgaatatgagagagaatattgtacaaaagttgta 35037638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 44539371 - 44539315
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatata 61  Q
    |||||||||||||||||||| ||||||| ||| ||||| |||| || ||||||||||    
T  44539371 aataaaaagataatgtgagtatgagagataaagttgtataaaaattatacaaatata 44539315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 48650250 - 48650302
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||| ||||| ||||||||||| ||||||||||||| ||||||    
T  48650250 aataagaagataatatgagtatgagagagaaagttgtacaaaagttttacaaa 48650302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 50291359 - 50291307
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  ||||| ||||||||||||||    
T  50291359 aataagaagataatgtgagtatgagagagaaggttgtataaaagttgtacaaa 50291307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 68
Target Start/End: Original strand, 1580275 - 1580342
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgt-acaaa-agttgtacaaatataatttctc 68  Q
    ||||||| | |||||||||||| |||||||||||||||| |||||  ||||||||||||| |||||||    
T  1580275 ataataagaggataatgtgagtatgagagagaaaattgtcacaaagtgttgtacaaatatcatttctc 1580342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 10250511 - 10250558
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  10250511 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 10250558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 36177981 - 36177934
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattg-tacaaaagttgta 53  Q
    |||||||||||||||||| |||||||||||||||  ||||||||||||    
T  36177981 taaaaagataatgtgagtatgagagagaaaattgcgacaaaagttgta 36177934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 36364779 - 36364826
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||| |||||||||||||| ||||||||||  |||||||||||||||    
T  36364779 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttgt 36364826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 41609673 - 41609720
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||||| ||||||||||| ||||||| ||| |||||||||||||||    
T  41609673 aataaaaacataatgtgagtatgagagataaagttgtacaaaagttgt 41609720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 43982974 - 43982927
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||| ||||||| |||||| ||||||||||||||||| |||||||||    
T  43982974 aataagaagataaggtgagtatgagagagaaaattgtataaaagttgt 43982927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 48722146 - 48722099
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||||| ||||||||||| ||||||||||||||||  |||||||||    
T  48722146 aataaaaacataatgtgagtatgagagagaaaattgtcaaaaagttgt 48722099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 2268503 - 2268549
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||||    
T  2268503 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 2268549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 14 - 52
Target Start/End: Original strand, 5208330 - 5208368
Alignment:
Q  14 ataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  5208330 ataatgtgagtatgagagagaaagttgtacaaaagttgt 5208368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 31413786 - 31413846
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    |||||||||| ||| ||||||||||| |||||||||   |||||||||||||| |||||||    
T  31413786 aagataatgtcagtatgagagagaaagttgtacaaaaatagttgtacaaatatcatttctc 31413846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 40348869 - 40348835
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||||||||||||| ||||||||||||||||    
T  40348869 taaaaagataatgtgagtatgagagagaaaattgt 40348835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 41
Target Start/End: Original strand, 52911781 - 52911819
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||||| ||||||||||| ||||||||||||||||    
T  52911781 ataataaaaacataatgtgagtatgagagagaaaattgt 52911819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 52
Target Start/End: Original strand, 7037492 - 7037525
Alignment:
Q  19 gtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||| |||||||||||||||||||||||||||    
T  7037492 gtgagtatgagagagaaaattgtacaaaagttgt 7037525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 26442384 - 26442433
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| |||| |||||| |||| ||||||||||||    
T  26442384 aataaaaacataatgtgagtatgagtgagaaagttgtgcaaaagttgtac 26442433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 41170849 - 41170801
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||| ||||||||||||    
T  41170849 aataaaaatataatgtgagtatgagagagaaagttgt-caaaagttgtac 41170801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Original strand, 46355294 - 46355339
Alignment:
Q  12 agataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||||||||||| ||||||||||  ||||| ||||||||||||||    
T  46355294 agataatgtgagtatgagagagaatgttgtataaaagttgtacaaa 46355339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 52456923 - 52456968
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||| ||||||||||| ||||||||||||||||  |||||||||    
T  52456923 taaaaatataatgtgagtatgagagagaaaattgtctaaaagttgt 52456968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 1688422 - 1688470
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| || ||||||||||| ||||||||||| ||||| ||||||||||    
T  1688422 aataagaatataatgtgagtatgagagagaaagttgtaaaaaagttgta 1688470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 6093601 - 6093649
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||| ||| ||||||||||| |||||||||| |||||    
T  6093601 aataaaaacataatgtaagtatgagagagaaagttgtacaaaaattgta 6093649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 7795091 - 7795025
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||| ||| ||||| ||||| ||||||||||   ||||||||||||| |||||||    
T  7795091 aataagaagataatgtaagtatgagaaagaaagttgtacaaaaatggttgtacaaatatcatttctc 7795025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 14 - 50
Target Start/End: Complemental strand, 31240716 - 31240680
Alignment:
Q  14 ataatgtgagtttgagagagaaaattgtacaaaagtt 50  Q
    ||||||||||||||||||||||| ||||| |||||||    
T  31240716 ataatgtgagtttgagagagaaagttgtaaaaaagtt 31240680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 31574933 - 31574981
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||||||| ||||||||||| |||||||||||||| | |||||||||||    
T  31574933 aataaaaatataatgtgagtatgagagagaaaattatcacaaaagttgt 31574981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 36081876 - 36081828
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| || ||||||||||| ||||||||||| |||| |||||||||||    
T  36081876 aataagaatataatgtgagtatgagagagaaagttgtccaaaagttgta 36081828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 36110211 - 36110159
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||| | ||||||||||  |||||||||| |||||||||    
T  36110211 aataagaagataatgtgaatatgagagagaaggttgtacaaaaattgtacaaa 36110159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 37775421 - 37775469
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| ||||||||||| || ||| ||||||| ||||||||||||||||    
T  37775421 aataagaagataatgtgtgtatgaaagagaaagttgtacaaaagttgta 37775469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 38960654 - 38960706
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||| ||||| ||||||||||  ||||| |||| |||||||||    
T  38960654 aataaaaagataatatgagtatgagagagaaggttgtataaaaattgtacaaa 38960706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 39606044 - 39606008
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  39606044 aataaaaagataatgtgagtatgagagagaaagttgt 39606008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 53357071 - 53357107
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  53357071 aataaaaagataatgtgagtatgagagagaaagttgt 53357107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 55996499 - 55996463
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  55996499 aataagaagataatgtgagtatgagagagaaaattgt 55996463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 170; Significance: 4e-91; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 170; E-Value: 4e-91
Query Start/End: Original strand, 86 - 370
Target Start/End: Original strand, 34825718 - 34826007
Alignment:
Q  86 aaaagtaagcacataaattttcatgtttttcatgattct---gt---tcgacaatattaatttagaagtataattagataaataattaatacaaaattaa 179  Q
    ||||||||||||||||||||||||||||||||||||||    ||   | ||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  34825718 aaaagtaagcacataaattttcatgtttttcatgattcaaaagtatgtagacaatattaatt-agaagtataattagataaataattaatataaaattaa 34825816  T
Q  180 aaaagcaatatgatatttattttagacatttttatatgataaattgatgatccacaataattttagaatggatattgtnnnnnnngagaatgaatgaaat 279  Q
    ||||| || |||||||||| ||||||||||||||||||| ||||||||||||| | ||||||||| ||||||||| ||       ||||| |||||||||    
T  34825817 aaaagtaaaatgatatttagtttagacatttttatatgacaaattgatgatccgcgataattttacaatggatatagtaaaaaaagagaaggaatgaaat 34825916  T
Q  280 aaacaaaaatgatttgttgagtattatatgaactagttttggatgaacacaatacaagggtacactcacatatttgagaaaaactgtgtaa 370  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||||||||||||||||||||||    
T  34825917 aaacaaaaatgatttattgagtattatatgaactagttttggatgaacacgatacaaggctacactcgcatatttgagaaaaactgtgtaa 34826007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 129 - 249
Target Start/End: Original strand, 8290333 - 8290443
Alignment:
Q  129 gacaatattaatttagaagtataattagataaataattaatacaaaattaaaaaagcaatatgatatttattttagacatttttatatgataaattgatg 228  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||||          || |||||||||||||||||| || |||||||||||||||||     
T  8290333 gacaatattaatatagaagtatgattagataaataattaatataaaa----------aaaatgatatttattttagactttcttatatgataaattgata 8290422  T
Q  229 atccacaataattttagaatg 249  Q
     |||||||||||| |||||||    
T  8290423 ctccacaataattctagaatg 8290443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 33465033 - 33465099
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||||||||||||||   ||||||||||||| |||||||    
T  33465033 aataagaagataatgtgagtatgagagagaaaattgtacaaaaatggttgtacaaatatcatttctc 33465099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 45335933 - 45335887
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  45335933 aagataatgtgagtatgagagagaaagttgtacaaaagttgtacaaa 45335887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 28548215 - 28548264
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  28548215 aataaaaacataatgtgagtatgagagagaaagttgtacaaaagttgtac 28548264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 30538703 - 30538654
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  30538703 aataaaaatataatgtgagtatgagagagaaagttgtacaaaagttgtac 30538654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 640469 - 640417
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||| ||||||||||| ||||||||||| |||||||||| |||||||||    
T  640469 aataaaaacataatgtgagtatgagagagaaagttgtacaaaaattgtacaaa 640417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 1709361 - 1709309
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| |||||||||| ||||||||||| |||||||||    
T  1709361 aataagaagataatgtgagtatgagagagaatattgtacaaaaattgtacaaa 1709309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 37970008 - 37969960
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||||||||    
T  37970008 aataaaaacataatgtgagtatgagagagaaagttgtacaaaagttgta 37969960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 41910179 - 41910231
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  41910179 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttgtacaaa 41910231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 47945060 - 47945008
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  47945060 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttgtacaaa 47945008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 47950490 - 47950438
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  47950490 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttgtacaaa 47950438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 48639377 - 48639429
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  48639377 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttgtacaaa 48639429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 49142511 - 49142577
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| |||||||||||||| |||||||   ||||||||||||| |||||||    
T  49142511 aataagaagataatgtgagtatgagagagaaaattttacaaaaatggttgtacaaatatcatttctc 49142577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 47379651 - 47379605
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||| ||||||||||| |||||||||||||| |||||||||||||    
T  47379651 taaaaacataatgtgagtatgagagagaaaattatacaaaagttgta 47379605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 2600528 - 2600577
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||| ||| |||||||||||||||||    
T  2600528 aataaaaacataatgtgagtgtgagagaaaaagttgtacaaaagttgtac 2600577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 8290564 - 8290609
Alignment:
Q  265 gagaatgaatgaaataaacaaaaatgatttgttgagtattatatga 310  Q
    |||||||| |||||||| | ||||||||||||||||||||||||||    
T  8290564 gagaatgagtgaaataagctaaaatgatttgttgagtattatatga 8290609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 41458894 - 41458943
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||||||||| ||||||    
T  41458894 aataaaaacataatgtgagtatgagagagaaagttgtacaaaaattgtac 41458943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 17039234 - 17039182
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||| |||||||||| || ||||||    
T  17039234 aataagaagataatgtgagtatgagagagaaagttgtacaaaaattatacaaa 17039182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 27704512 - 27704460
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||| ||||  ||||||||||||||||||||    
T  27704512 aataagaagataatgtgagtatgagatagaaggttgtacaaaagttgtacaaa 27704460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 27866531 - 27866597
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||| ||| ||||||||||   ||||||||||||| |||||||    
T  27866531 aataagaagataatgtgagtatgagagataaagttgtacaaaaatggttgtacaaatatcatttctc 27866597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 41030360 - 41030312
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||||||    
T  41030360 aataagaagataatgtgagtgtgagagagaaggttgtacaaaagttgta 41030312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 41538559 - 41538507
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  |||||||||| |||||||||    
T  41538559 aataagaagataatgtgagtatgagagagaaggttgtacaaaaattgtacaaa 41538507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 43942712 - 43942649
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgtacaaa--agttgtacaaatataatttctc 68  Q
    |||||||||||||||||| ||||||||||| ||||| |||  |||||| ||||||| |||||||    
T  43942712 taaaaagataatgtgagtatgagagagaaagttgtaaaaaatagttgttcaaatatcatttctc 43942649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 30941461 - 30941414
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  30941461 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 30941414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 57
Target Start/End: Original strand, 34349030 - 34349073
Alignment:
Q  14 ataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||||||||| ||||||||||||||||  ||||||||||||||    
T  34349030 ataatgtgagtatgagagagaaaattgtcaaaaagttgtacaaa 34349073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 40207795 - 40207846
Alignment:
Q  6 ataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||| |||||||||||| | ||||| |||||||| |||||||||||||||||    
T  40207795 ataagaagataatgtgaatatgagaaagaaaattatacaaaagttgtacaaa 40207846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 29923748 - 29923706
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||    
T  29923748 aataataagataatgtgagtatgagagagaaagttgtacaaaa 29923706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 34108850 - 34108896
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||    
T  34108850 taaaaacataatgtgagtatgagagagaaaattgtcacaaaagttgt 34108896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 40854650 - 40854696
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||||| ||||||||||| |||||||||||||||| |||||||||||    
T  40854650 taaaaatataatgtgagtatgagagagaaaattgtcacaaaagttgt 40854696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Original strand, 11789689 - 11789734
Alignment:
Q  9 aaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||| ||||||||||| ||||||| ||| |||||||||||||||||    
T  11789689 aaaacataatgtgagtatgagagacaaagttgtacaaaagttgtac 11789734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 26 - 55
Target Start/End: Original strand, 35491426 - 35491455
Alignment:
Q  26 tgagagagaaaattgtacaaaagttgtaca 55  Q
    ||||||||||||||||||||||||||||||    
T  35491426 tgagagagaaaattgtacaaaagttgtaca 35491455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 38073273 - 38073224
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||||| |||||||| || |||| ||||||||||||    
T  38073273 aataaaaagataatgtgagtatgagagagtaagttgtcacaaaagttgta 38073224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 54
Target Start/End: Complemental strand, 38197734 - 38197689
Alignment:
Q  9 aaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||||||||||| ||| ||||||| |||||||||| ||||||    
T  38197734 aaaagataatgtgagtatgaaagagaaagttgtacaaaaattgtac 38197689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 39415495 - 39415450
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagtt 50  Q
    ||||| |||||||||||||| ||||||||||| ||||||| |||||    
T  39415495 aataagaagataatgtgagtatgagagagaaagttgtacataagtt 39415450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 19933937 - 19933885
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| || ||||||||||| |||||||||| |||||| ||||||| ||||||    
T  19933937 aataagaatataatgtgagtatgagagagaagattgtataaaagttatacaaa 19933885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 19965076 - 19965024
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| || ||||||||||| |||||||||| |||||| ||||||| ||||||    
T  19965076 aataagaatataatgtgagtatgagagagaagattgtataaaagttatacaaa 19965024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 24380715 - 24380781
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||| ||||| ||||| ||||   ||||||||||||| |||||||    
T  24380715 aataagaagataatgtgagtatgagaaagaaagttgtataaaaatggttgtacaaatatcatttctc 24380781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 25272668 - 25272602
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| |  |||||||| ||||||||||   ||||||||||||| |||||||    
T  25272668 aataagaagataatgtgagtatatgagagaaagttgtacaaaaatggttgtacaaatatcatttctc 25272602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 35212949 - 35212997
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||| | ||||||||||| |||||||||| |||||    
T  35212949 aataaaaacataatgtgaatatgagagagaaagttgtacaaaaattgta 35212997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 40108201 - 40108135
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||| ||||| ||||   |||||||||| || |||||||    
T  40108201 aataagaagataatgtgagtatgagagagaaagttgtataaaaatggttgtacaaacatcatttctc 40108135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 6e-56; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 6e-56
Query Start/End: Original strand, 86 - 254
Target Start/End: Original strand, 33658935 - 33659108
Alignment:
Q  86 aaaagtaagcacataaattttcatgtttttcatgattct---gt---tcgacaatattaatttagaagtataattagataaataattaatacaaaattaa 179  Q
    ||||||||||||||||||||||||||||||||||||||    ||   | |||||||||| || |||||||||||||||||||||||||||| |||||| |    
T  33658935 aaaagtaagcacataaattttcatgtttttcatgattcaaaagtatgtagacaatattagtt-agaagtataattagataaataattaatataaaattga 33659033  T
Q  180 aaaagcaatatgatatttattttagacatttttatatgataaattgatgatccacaataattttagaatggatat 254  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  33659034 aaaagcaaaatgatatttattttagacatttttatatgacaaattgatgatccacaataattttagaatggatat 33659108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 22422227 - 22422164
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||||||||||||||  |||||||    
T  22422227 aataagaagataatgtgagtatgagagagaaagttgtacaaaagttgtacaaataacatttctc 22422164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 68
Target Start/End: Complemental strand, 17442901 - 17442833
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||||| |||||||||||||| | ||||||||| ||||||||||   ||||||||||||| |||||||    
T  17442901 ataataagaagataatgtgagtataagagagaaagttgtacaaaaatggttgtacaaatattatttctc 17442833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 9395331 - 9395397
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||| ||||||| |||||||||   |||||||||||||| |||||||    
T  9395331 aataagaagataatgtgagtatgaaagagaaagttgtacaaaaatagttgtacaaatatcatttctc 9395397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12151851 - 12151903
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||| | || |||||||||||||||||    
T  12151851 aataagaagataatgtgagtatgagagagagagttatacaaaagttgtacaaa 12151903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 15974685 - 15974621
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgtacaaatataatttctc 68  Q
    |||||||||||||||||| | ||||||||||| |||| ||||| ||||| ||||||| |||||||    
T  15974685 aataaaaagataatgtgaatatgagagagaaagttgtaacaaatgttgttcaaatatcatttctc 15974621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 6 - 53
Target Start/End: Complemental strand, 34047463 - 34047415
Alignment:
Q  6 ataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  34047463 ataaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 34047415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 25811834 - 25811881
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  25811834 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 25811881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 27176034 - 27175987
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||||| ||||| ||||| ||||||||||||||||| |||||||||    
T  27176034 aataaaaatataatatgagtatgagagagaaaattgtaaaaaagttgt 27175987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 3 - 57
Target Start/End: Original strand, 6997542 - 6997596
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||||||||||| |||||||| || | |||||||| || ||||||    
T  6997542 ataataaaaagataatgtgagtatgagagaggaagtagtacaaaaattatacaaa 6997596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 5570327 - 5570376
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||| ||||||||||| |||||||||||||||| |||||| |||||    
T  5570327 aataaaaatataatgtgagtatgagagagaaaattgtcacaaaaattgta 5570376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 57
Target Start/End: Complemental strand, 34792088 - 34792047
Alignment:
Q  16 aatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||||||| ||||||||||  ||||||||||||||||||||    
T  34792088 aatgtgagtatgagagagaaggttgtacaaaagttgtacaaa 34792047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 2165294 - 2165360
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| ||||||||| |||| ||||||| ||| ||||||||||   ||||||||||||| |||||||    
T  2165294 aataagaagataatgcgagtatgagagataaagttgtacaaaaatggttgtacaaatatcatttctc 2165360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 2176927 - 2176993
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| ||||||||| |||| ||||||| ||| ||||||||||   ||||||||||||| |||||||    
T  2176927 aataagaagataatgcgagtatgagagataaagttgtacaaaaatggttgtacaaatatcatttctc 2176993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 16121229 - 16121163
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||| ||| ||| ||||||| ||||||||||   ||||||||||||| |||||||    
T  16121229 aataagaagataatgtaagtatgaaagagaaagttgtacaaaaatggttgtacaaatatcatttctc 16121163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 25567484 - 25567550
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||| ||| ||||||||||   ||||||| ||||| |||||||    
T  25567484 aataagaagataatgtgagtatgagagataaagttgtacaaaaatggttgtacgaatatcatttctc 25567550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 27790229 - 27790281
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||| ||  ||||| ||||||||||||||    
T  27790229 aataagaagataatgtgagtatgagagataaggttgtataaaagttgtacaaa 27790281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 32135425 - 32135491
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||| ||||||| ||||||||||    |||||||||||| |||||||    
T  32135425 aataagaagataatgtgagtatgatagagaaagttgtacaaaaatgattgtacaaatatcatttctc 32135491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 33)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 17574218 - 17574281
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||||||||||||||||| ||||||||||| |||||||||||||||||| |||| |||||||    
T  17574218 aataaaaagataatgtgagtatgagagagaaagttgtacaaaagttgtacagatattatttctc 17574281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 9940127 - 9940070
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||||||||||| ||||||||||| ||||| | ||||||||||||||| |||||||    
T  9940127 aagataatgtgagtatgagagagaaagttgtatataagttgtacaaatattatttctc 9940070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 29765907 - 29765858
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  29765907 aataaaaacataatgtgagtgtgagagagaaagttgtacaaaagttgtac 29765858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 3031911 - 3031859
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  3031911 aataagaagataatgtgagtatgaaagagaaagttgtacaaaagttgtacaaa 3031859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 14522958 - 14523010
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||| ||| ||||||||||||||||| ||||||||||||||    
T  14522958 aataagaagataatgttagtatgagagagaaaattgtaaaaaagttgtacaaa 14523010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 25585450 - 25585502
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| || ||||||||||| ||||||||||| ||||||||||||||||||||    
T  25585450 aataagaacataatgtgagtatgagagagaaatttgtacaaaagttgtacaaa 25585502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 43153054 - 43153120
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    |||||||||||||||||| | ||||||||||| ||||||||||   ||||||||||||| |||||||    
T  43153054 aataaaaagataatgtgaatatgagagagaaagttgtacaaaaattgttgtacaaatatcatttctc 43153120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 5386147 - 5386084
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| || ||||||||||| ||||||||||| ||||  ||||||||||||||||| |||||||    
T  5386147 aataataacataatgtgagtatgagagagaaagttgtttaaaagttgtacaaatatcatttctc 5386084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 53
Target Start/End: Complemental strand, 1108060 - 1108010
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||||| ||||||||||| ||||||| ||| ||||||||||||||||    
T  1108060 ataataaaaacataatgtgagtatgagagataaagttgtacaaaagttgta 1108010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 8442236 - 8442170
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    |||||||||||||||||| | ||||||||||| |||||||||   | |||||||||||| |||||||    
T  8442236 aataaaaagataatgtgaatatgagagagaaagttgtacaaaaataattgtacaaatatcatttctc 8442170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 12203224 - 12203158
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||  ||||||||||| ||||||||||   ||||||||||||| |||||||    
T  12203224 aataagaagataatgtgagcatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctc 12203158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 18729283 - 18729335
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||| ||||||  ||||||||||||||||||||    
T  18729283 aataagaagataatgtgagtatgaaagagaaggttgtacaaaagttgtacaaa 18729335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 20985523 - 20985575
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||| |||||||||| || ||||||    
T  20985523 aataagaagataatgtgagtatgagagagaaagttgtacaaaaattatacaaa 20985575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 30103445 - 30103497
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||| ||||||||| | |||||||||||||||||||||| || ||||||    
T  30103445 aataaaaatataatgtgaatatgagagagaaaattgtacaaaaattatacaaa 30103497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 34693210 - 34693262
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| |||||||||| ||||||||||| || ||||||    
T  34693210 aataagaagataatgtgagtatgagagagaagattgtacaaaaattatacaaa 34693262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 39032598 - 39032650
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||| ||||| ||||||||||  ||||||||||||||||||||    
T  39032598 aataagaagataatatgagtatgagagagaaggttgtacaaaagttgtacaaa 39032650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 22649657 - 22649704
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| |||||||||||||||| |||||| |||||    
T  22649657 taaaaagataatgtgagtatgagagagaaaattgtcacaaaaattgta 22649704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 24329976 - 24330035
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatt 64  Q
    ||||| || ||||| ||||| ||||||||||| ||||||||||||||||| || ||||||    
T  24329976 aataagaacataatatgagtatgagagagaaagttgtacaaaagttgtaccaaaataatt 24330035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 7080607 - 7080565
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||    
T  7080607 aataagaagataatgtgagtatgagagagaaagttgtacaaaa 7080565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 18660834 - 18660788
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    ||||||||||| |||||| |||||||||||||||| |||||||||||    
T  18660834 taaaaagataacgtgagtatgagagagaaaattgtcacaaaagttgt 18660788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 22653732 - 22653690
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||    
T  22653732 aataagaagataatgtgagtatgagagagaaagttgtacaaaa 22653690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 42211594 - 42211560
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||| ||||||||||||||||||||||||||||    
T  42211594 taaaaacataatgtgagtttgagagagaaaattgt 42211560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 10469941 - 10469990
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| ||||| |||| ||||||    
T  10469941 aataaaaacataatgtgagtatgagagagaaagttgtataaaaattgtac 10469990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 16 - 68
Target Start/End: Original strand, 32732123 - 32732178
Alignment:
Q  16 aatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||||||| ||||||||||| ||||||||||    ||||||||||||||||||||    
T  32732123 aatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatataatttctc 32732178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 17 - 50
Target Start/End: Complemental strand, 38010937 - 38010904
Alignment:
Q  17 atgtgagtttgagagagaaaattgtacaaaagtt 50  Q
    |||||||| |||||||||||||||||||||||||    
T  38010937 atgtgagtatgagagagaaaattgtacaaaagtt 38010904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 42364506 - 42364465
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa 46  Q
    ||||||||||||||| |||| ||||||||||| |||||||||    
T  42364506 aataaaaagataatgcgagtatgagagagaaagttgtacaaa 42364465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 611942 - 611894
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    ||||||| |||||||||||| ||||||||||| |||| |||||||||||    
T  611942 aataaaatgataatgtgagtatgagagagaaagttgtcacaaaagttgt 611894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 8725416 - 8725482
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| || ||||||||||| ||||||||||| |||||  |||   |||||||||||||||||||||    
T  8725416 aataagaatataatgtgagtatgagagagaaagttgtaataaagtggttgtacaaatataatttctc 8725482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 9168158 - 9168206
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||||||| ||||||||||| ||| |||||||||||| |||||||||||    
T  9168158 aataaaaatataatgtgagtatgaaagagaaaattgtcacaaaagttgt 9168206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12891090 - 12891142
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||| | ||||||||||  ||||||||||||||| ||||    
T  12891090 aataagaagataatgtgaatatgagagagaatgttgtacaaaagttgtgcaaa 12891142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 16 - 52
Target Start/End: Complemental strand, 27440545 - 27440509
Alignment:
Q  16 aatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||||||| |||||||||||||||| ||||||||||    
T  27440545 aatgtgagtatgagagagaaaattgttcaaaagttgt 27440509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 37821119 - 37821167
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| |||||||||||||| | ||||||||  ||||||||||||||||    
T  37821119 aataagaagataatgtgagtataagagagaaggttgtacaaaagttgta 37821167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 40201114 - 40201180
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||| | |||||||||| |||||||||||   |||||| |||||| |||||||    
T  40201114 aataagaagataatgtgactatgagagagaatattgtacaaaaatggttgtataaatatcatttctc 40201180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 48; Significance: 2e-18; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 129 - 255
Target Start/End: Original strand, 21870761 - 21870876
Alignment:
Q  129 gacaatattaatttagaagtataattagataaataattaatacaaaattaaaaaagcaatatgatatttattttagacatttttatatgataaattgatg 228  Q
    |||||||||||| ||||||||| ||||||||||||||||||| ||||          ||||| ||||||||||||||| || |||||||||||||||||     
T  21870761 gacaatattaatatagaagtatgattagataaataattaatataaaa----------aatat-atatttattttagactttcttatatgataaattgata 21870849  T
Q  229 atccacaataattttagaatggatatt 255  Q
     |||||||||||| ||||||| |||||    
T  21870850 ctccacaataattctagaatgaatatt 21870876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 35008095 - 35008158
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||||||||||||||||| ||||| | ||||||||||||||||||||||||||| |||||||    
T  35008095 aataaaaagataatgtgagtatgagaaataaaattgtacaaaagttgtacaaatatcatttctc 35008158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 43205170 - 43205107
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||    
T  43205170 aataagaagataatgtgagtatgagagagaatgttgtacaaaagttgtacaaatatcatttctc 43205107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 17999823 - 17999773
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtaca 55  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  17999823 aataaaaagataatgtgagtatgagagagaaagttgtacaaaagttgtaca 17999773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 1096343 - 1096400
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||||||||||| ||||||| |||||| |||||||||||||||||||| |||||||    
T  1096343 aagataatgtgagtatgagagataaaattatacaaaagttgtacaaatatcatttctc 1096400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 11 - 57
Target Start/End: Complemental strand, 30340064 - 30340018
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||    
T  30340064 aagataatgtgagtatgagagagaaagttgtacaaaagttgtacaaa 30340018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 265 - 310
Target Start/End: Original strand, 21870990 - 21871035
Alignment:
Q  265 gagaatgaatgaaataaacaaaaatgatttgttgagtattatatga 310  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||    
T  21870990 gagaatgaatgaaataagctaaaatgatttgttgagtattatatga 21871035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 23141424 - 23141367
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||||||||||| ||||||||| | |||||||||| |||||||||||| |||||||    
T  23141424 aagataatgtgagtatgagagagacagttgtacaaaaattgtacaaatatcatttctc 23141367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 23553214 - 23553157
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||||||||||| ||||||||| | |||||||||| |||||||||||| |||||||    
T  23553214 aagataatgtgagtatgagagagacagttgtacaaaaattgtacaaatatcatttctc 23553157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 40721848 - 40721799
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  40721848 aataaaaacataatgtgagtatgagagagaaagttgtacaaaagttgtac 40721799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 22296123 - 22296189
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| | ||||||||||||||||||||   ||||||||||||| |||||||    
T  22296123 aataagaagataatgtgagtatcagagagaaaattgtacaaaaatggttgtacaaatatcatttctc 22296189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 3366106 - 3366064
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    |||||||||||||||||||| ||||| ||||||||||||||||    
T  3366106 aataaaaagataatgtgagtatgagaaagaaaattgtacaaaa 3366064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 5852553 - 5852499
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||||| || ||||||||||| ||||||||||  ||||||||||||||||||||    
T  5852553 ataataagaaaataatgtgagtatgagagagaaggttgtacaaaagttgtacaaa 5852499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 11728115 - 11728164
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||| ||||||| |||||||||||||||||    
T  11728115 aataaaaacataatgtgagtatgaaagagaaagttgtacaaaagttgtac 11728164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 20247861 - 20247910
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||| ||||    
T  20247861 aataaaaacataatgtgagtatgagagagaaagttgtacaaaagtcgtac 20247910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 6885474 - 6885540
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||||||||| |||   ||||||||||| || |||||||    
T  6885474 aataagaagataatgtgagtatgagagagaaaattgtataaaaatagttgtacaaaaatcatttctc 6885540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 12256978 - 12256926
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||| ||||||    
T  12256978 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttatacaaa 12256926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 24727492 - 24727426
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    |||||||| ||||||||||| ||||||||||| |||||| |||   ||||||||||||| |||||||    
T  24727492 aataaaaacataatgtgagtatgagagagaaagttgtaccaaaatggttgtacaaatatcatttctc 24727426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 27529606 - 27529554
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| | | ||||||| ||||||||||||||||||||    
T  27529606 aataagaagataatgtgagtataatagagaaagttgtacaaaagttgtacaaa 27529554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 28679205 - 28679153
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||| ||||| ||||||||||  ||||||||||||||||||||    
T  28679205 aataagaagataatatgagtatgagagagaatgttgtacaaaagttgtacaaa 28679153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 38027609 - 38027661
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||| | ||||||||||  ||||||||||||||||||||    
T  38027609 aataagaagataatgtgaatatgagagagaaggttgtacaaaagttgtacaaa 38027661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 38724312 - 38724378
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    |||||||| ||||||||||| |||||||||||||| ||| |||   ||||||||||||| |||||||    
T  38724312 aataaaaacataatgtgagtgtgagagagaaaattatactaaaatggttgtacaaatatcatttctc 38724378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 40115592 - 40115526
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    ||||| |||||||||| ||| |||||||||||||| ||||||   |||||||||||||| |||||||    
T  40115592 aataagaagataatgttagtatgagagagaaaattatacaaaaatagttgtacaaatatcatttctc 40115526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 4723643 - 4723596
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||| |||||||||||||| ||||||||||| ||||| |||||||||    
T  4723643 aataagaagataatgtgagtatgagagagaaagttgtaaaaaagttgt 4723596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 16463367 - 16463312
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatat 60  Q
    ||||||||||||||| |||| ||||||||||   |||||||| |||||||||||||    
T  16463367 aataaaaagataatgcgagtatgagagagaaggatgtacaaatgttgtacaaatat 16463312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 18254205 - 18254252
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  18254205 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 18254252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 24361568 - 24361505
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||| | ||||||||||| ||||| ||||| ||||  ||||||||||||||||| |||||||    
T  24361568 aataaagatataatgtgagtatgagatagaaagttgtcaaaaagttgtacaaatatcatttctc 24361505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 24491671 - 24491738
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa-----gttgtacaaatataatttct 67  Q
    ||||| ||||||||||||||  |||||||||||||||||||||     ||||||||||||| ||||||    
T  24491671 aataagaagataatgtgagtacgagagagaaaattgtacaaaaaattggttgtacaaatatcatttct 24491738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 13850178 - 13850220
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||    
T  13850178 aataaaaacataatgtgagtatgagagagaaagttgtacaaaa 13850220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 39
Target Start/End: Complemental strand, 17917466 - 17917432
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaatt 39  Q
    |||||||||||||||||||| ||||||||||||||    
T  17917466 aataaaaagataatgtgagtatgagagagaaaatt 17917432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 34373082 - 34373040
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||    
T  34373082 aataaaaacataatgtgagtatgagagagaaagttgtacaaaa 34373040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 41195659 - 41195613
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    ||||||| |||||||||| |||||||||||||||| |||||||||||    
T  41195659 taaaaaggtaatgtgagtatgagagagaaaattgtcacaaaagttgt 41195613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 6511328 - 6511279
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||||| ||||||||||| |||| || |||||||||    
T  6511328 aataaaaagataatgtgagtatgagagagaaagttgtcactaaagttgta 6511279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 19523395 - 19523436
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa 46  Q
    ||||| |||||||||||||| ||||||||||| |||||||||    
T  19523395 aataagaagataatgtgagtatgagagagaaagttgtacaaa 19523436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 25094429 - 25094380
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||| | ||||||||||| |||||||||| ||||||    
T  25094429 aataaaaacataatgtgaatatgagagagaaagttgtacaaaaattgtac 25094380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 52
Target Start/End: Original strand, 31635802 - 31635851
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||||| |||||||||||||| ||||||||||| ||||  |||||||||    
T  31635802 ataataagaagataatgtgagtatgagagagaaagttgtcaaaaagttgt 31635851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 43514969 - 43514920
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||| ||||| ||| ||||||||||||| |||||||||||    
T  43514969 aataaaaatataatatgagtatgaaagagaaaattgtataaaagttgtac 43514920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 546379 - 546427
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| ||||  ||||||||||    
T  546379 aataaaaatataatgtgagtatgagagagaaagttgttaaaaagttgta 546427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 6666097 - 6666049
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| | ||| ||||||||||    
T  6666097 aataaaaatataatgtgagtatgagagagaaagtcgtaaaaaagttgta 6666049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 6842551 - 6842587
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  6842551 aataaaaatataatgtgagtatgagagagaaaattgt 6842587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 7497985 - 7498033
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| ||||  ||||||||||    
T  7497985 aataaaaatataatgtgagtatgagagagaaagttgtcaaaaagttgta 7498033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 9647207 - 9647144
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgtacaaa--agttgtacaaatataatttctc 68  Q
    |||||||||||| ||||| ||||||||||| ||||| |||  |||||| ||||||| |||||||    
T  9647207 taaaaagataatatgagtatgagagagaaagttgtaaaaaatagttgttcaaatatcatttctc 9647144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 58
Target Start/End: Complemental strand, 9990766 - 9990714
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgtacaaat 58  Q
    |||||||||||||||||| | ||||||||| |||| |||||||||||| ||||    
T  9990766 taaaaagataatgtgagtataagagagaaagttgtcacaaaagttgtaaaaat 9990714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 12208519 - 12208467
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| || ||||||||||| ||| ||||||| || |||||||||||||||||    
T  12208519 aataagaaaataatgtgagtatgaaagagaaagttatacaaaagttgtacaaa 12208467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 18749357 - 18749409
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||| ||||||||||| ||||||||||  |||||||||| || ||||||    
T  18749357 aataaaaaaataatgtgagtatgagagagaaggttgtacaaaaattatacaaa 18749409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 19637298 - 19637254
Alignment:
Q  13 gataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  19637298 gataatgtgagtatgaaagagaaagttgtacaaaagttatacaaa 19637254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 13 - 57
Target Start/End: Complemental strand, 19835891 - 19835847
Alignment:
Q  13 gataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||| ||| ||||||| ||||||||||||| ||||||    
T  19835891 gataatgtgagtatgaaagagaaagttgtacaaaagttatacaaa 19835847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 27538910 - 27538976
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| | | ||||||| ||||||||||   ||||||||||||| |||||||    
T  27538910 aataagaagataatgtgagtatcatagagaaagttgtacaaaaatggttgtacaaatatcatttctc 27538976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 42554853 - 42554805
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| || ||||||||||| ||||||||||| ||||| ||||||||||    
T  42554853 aataagaatataatgtgagtatgagagagaaagttgtaaaaaagttgta 42554805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 44897703 - 44897651
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| ||||||||||||||  |||||||||  |||||| |||||||||||||    
T  44897703 aataagaagataatgtgagtacgagagagaaggttgtacgaaagttgtacaaa 44897651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 45202126 - 45202192
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||| | ||||||||||| ||||| ||||   ||||||||||||| |||||||    
T  45202126 aataagaagataatgtgaatatgagagagaaagttgtaaaaaaatggttgtacaaatatcatttctc 45202192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 4e-17; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 48689627 - 48689570
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||||||||||| |||||||||||||| |||||||||||||||||||| |||||||    
T  48689627 aagataatgtgagtatgagagagaaaattatacaaaagttgtacaaatatcatttctc 48689570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 29094740 - 29094803
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| |||||||||| ||||||| |||||||||||||||| |||||||    
T  29094740 aataagaagataatgtgagtatgagagagaagattgtacgaaagttgtacaaatatcatttctc 29094803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 11897251 - 11897202
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||||||    
T  11897251 aataaaaacataatgtgagtatgagagagaaagttgtacaaaagttgtac 11897202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 5574253 - 5574305
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  5574253 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttgtacaaa 5574305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 11121558 - 11121492
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaag---ttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||| |||||||||||   |||||||||||| |||||||    
T  11121558 aataagaagataatgtgagtatgagagagaaagttgtacaaaagttgttgtacaaatatcatttctc 11121492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 40118709 - 40118761
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| |||||||||||||||||||||| || ||||||    
T  40118709 aataagaagataatgtgagtatgagagagaaaattgtacaaaaattatacaaa 40118761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 48390071 - 48390123
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  48390071 aataagaagataatgtgagtatgagagagaagtttgtacaaaagttgtacaaa 48390123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 12972698 - 12972761
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    ||||| |||| ||||||||| ||||||||||  ||||| ||||||||||||||||| |||||||    
T  12972698 aataagaagaaaatgtgagtatgagagagaatgttgtataaaagttgtacaaatatcatttctc 12972761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 7 - 52
Target Start/End: Original strand, 12999818 - 12999863
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||| ||||||||||| ||||||||||| |||||||||||||||    
T  12999818 taaaaatataatgtgagtatgagagagaaagttgtacaaaagttgt 12999863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 27787566 - 27787517
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||||||| | |||||||||||||||    
T  27787566 aataaaaacataatgtgagtatgagagagaaagtcgtacaaaagttgtac 27787517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 48962063 - 48962014
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    ||||| |||||||||||||| ||||||||||  |||||||||||||||||    
T  48962063 aataagaagataatgtgagtatgagagagaaggttgtacaaaagttgtac 48962014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 1100294 - 1100242
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||| ||||||| |||||||||| |||||||||    
T  1100294 aataagaagataatgtgagtatgatagagaaagttgtacaaaaattgtacaaa 1100242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 12990463 - 12990515
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  |||||| |||||||||||||    
T  12990463 aataagaagataatgtgagtatgagagagaaggttgtacgaaagttgtacaaa 12990515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 30414941 - 30414875
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||   ||||||||||||| |||||||    
T  30414941 aataagaagataatgtgagtatgagagagaaggttgtacaaaaatggttgtacaaatatcatttctc 30414875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 48256984 - 48256920
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa-agttgtacaaatataatttctc 68  Q
    ||||| |||||||||||| | ||||||||||| |||||||||  ||||||||||||| |||||||    
T  48256984 aataagaagataatgtgaatatgagagagaaagttgtacaaatggttgtacaaatatcatttctc 48256920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 649844 - 649797
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  649844 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 649797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 2854954 - 2855001
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||| |||||||||||||| ||||||| || ||||||||||||||||    
T  2854954 aataagaagataatgtgagtatgagagaaaagattgtacaaaagttgt 2855001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 17 - 68
Target Start/End: Complemental strand, 5383824 - 5383773
Alignment:
Q  17 atgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||||| ||||||| ||| ||||  |||||||||||||||||||||||||    
T  5383824 atgtgagtatgagagaaaaagttgtcaaaaagttgtacaaatataatttctc 5383773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Original strand, 21854458 - 21854517
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatt 64  Q
    ||||| || ||||| ||||| ||||||||||| ||||||||||||||||| || ||||||    
T  21854458 aataagaacataatatgagtatgagagagaaagttgtacaaaagttgtaccaaaataatt 21854517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 14 - 57
Target Start/End: Complemental strand, 22674780 - 22674737
Alignment:
Q  14 ataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||||||||| ||||||||||| |||||||||| |||||||||    
T  22674780 ataatgtgagtatgagagagaaagttgtacaaaaattgtacaaa 22674737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 37685406 - 37685359
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  37685406 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 37685359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 37700112 - 37700159
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||||    
T  37700112 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagttgta 37700159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 43105182 - 43105123
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatt 64  Q
    ||||| |||||||| ||||| ||||||||||||||||| |||| || |||||| ||||||    
T  43105182 aataagaagataatatgagtatgagagagaaaattgtataaaaattatacaaaaataatt 43105123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 44672024 - 44672071
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||| |||||||||||||| ||||||||||||||||  |||||||||    
T  44672024 aataagaagataatgtgagtatgagagagaaaattgtcaaaaagttgt 44672071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 46903547 - 46903481
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgta-caaaa--gttgtacaaatataatttctc 68  Q
    |||||||| ||||||||||| ||||||||||| ||||| |||||  ||||||||||||| |||||||    
T  46903547 aataaaaacataatgtgagtatgagagagaaagttgtatcaaaatggttgtacaaatatcatttctc 46903481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 67
Target Start/End: Original strand, 50460706 - 50460771
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttct 67  Q
    ||||| |||||||||||||| ||||| ||||| ||||||||||   ||||||||||||| ||||||    
T  50460706 aataagaagataatgtgagtatgagaaagaaagttgtacaaaaatggttgtacaaatatcatttct 50460771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Original strand, 2827704 - 2827746
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    |||||||| ||||||||||| ||||||||||| ||||||||||    
T  2827704 aataaaaacataatgtgagtatgagagagaaagttgtacaaaa 2827746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 16252759 - 16252819
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    |||||||||||||| ||| ||||||| ||||||||||   ||||||||||||| |||||||    
T  16252759 aagataatgtgagtatgaaagagaaagttgtacaaaaatggttgtacaaatatcatttctc 16252819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 6396404 - 6396355
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| | ||||||||| ||| ||||||| |||||||||||||||||    
T  6396404 aataaaaacacaatgtgagtatgaaagagaaagttgtacaaaagttgtac 6396355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 31666198 - 31666247
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| |||  |||||| |||||||||||||||||    
T  31666198 aataaaaacataatgtgagtatgatggagaaagttgtacaaaagttgtac 31666247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 37947214 - 37947255
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa 46  Q
    ||||| |||||||||||||| ||| |||||||||||||||||    
T  37947214 aataagaagataatgtgagtatgatagagaaaattgtacaaa 37947255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 644767 - 644701
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    |||||||| |||||| |||| ||||||| ||||||||| ||||   ||||||||||||| |||||||    
T  644767 aataaaaatataatgcgagtgtgagagaaaaaattgtataaaaatggttgtacaaatattatttctc 644701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 17 - 53
Target Start/End: Original strand, 3291431 - 3291467
Alignment:
Q  17 atgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||| ||||||||||||||||||||||||    
T  3291431 atgtgagtatgaaagagaaaattgtacaaaagttgta 3291467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 3851233 - 3851189
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagtt 50  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||    
T  3851233 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagtt 3851189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 8464507 - 8464555
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| || ||||||||||| ||||||||||||||||  ||||||||||    
T  8464507 aataagaatataatgtgagtatgagagagaaaattgtcaaaaagttgta 8464555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 15470050 - 15470086
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  15470050 aataaaaagataatgtgagtatgagagagaaagttgt 15470086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 23399983 - 23400031
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| |||| ||| ||||| |||||||||| |||||||||||||||||    
T  23399983 aataagaagaaaatatgagtatgagagagaagattgtacaaaagttgta 23400031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 29359714 - 29359670
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattg-tacaaaagtt 50  Q
    |||||||||||||||||| ||||||||||| ||| ||||||||||    
T  29359714 taaaaagataatgtgagtatgagagagaaagttgttacaaaagtt 29359670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 31244727 - 31244779
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||| | ||||||||||  |||||||||| |||||||||    
T  31244727 aataagaagataatgtgaatatgagagagaatgttgtacaaaaattgtacaaa 31244779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 31433568 - 31433502
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    |||||||| ||||||||||| ||||||| ||||||||   |||   |||||||||||||||||||||    
T  31433568 aataaaaacataatgtgagtatgagagaaaaaattgtcgtaaaatggttgtacaaatataatttctc 31433502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 33422213 - 33422261
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| ||||  ||||||||||    
T  33422213 aataaaaatataatgtgagtatgagagagaaagttgtcaaaaagttgta 33422261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 35030756 - 35030822
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||| ||| ||||||||||| ||||||||||   ||||||||||||  |||||||    
T  35030756 aataagaagataatgtaagtatgagagagaaagttgtacaaaaatggttgtacaaataacatttctc 35030822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 37619619 - 37619575
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagtt 50  Q
    |||||||||||||||||| ||||||||||| |||| |||||||||    
T  37619619 taaaaagataatgtgagtatgagagagaaagttgtcacaaaagtt 37619575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 39815423 - 39815375
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| || ||||||||||| ||||||||||| |||| |||||||||||    
T  39815423 aataagaatataatgtgagtatgagagagaaagttgtccaaaagttgta 39815375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 45272154 - 45272220
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||||| |||||||||||| ||||||||||| ||||  ||||   ||||||||||||| |||||||    
T  45272154 aataaaaggataatgtgagtatgagagagaaagttgtcaaaaagtggttgtacaaatatcatttctc 45272220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 47215718 - 47215770
Alignment:
Q  1 aaataataaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||||| | ||| ||||||||||| |||||||||||||||| |||||||||||    
T  47215718 aaataaaataaaaataatgtgagtatgagagagaaaattgtcacaaaagttgt 47215770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 48336433 - 48336480
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| |||||||| || ||||||||||||||||    
T  48336433 aataaaaacataatgtgagtatgagagag-aagttgtacaaaagttgta 48336480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 51727992 - 51728036
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    ||||||| |||||||||||||| ||||||||||  ||||||||||    
T  51727992 ataataagaagataatgtgagtatgagagagaaggttgtacaaaa 51728036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 52417608 - 52417560
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| ||||||||||| ||||||||||| ||||  ||||||||||    
T  52417608 aataaaaatataatgtgagtatgagagagaaagttgtcaaaaagttgta 52417560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 4148649 - 4148701
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  4148649 aataagaagataatgtgagtatgagagagaatattgtacaaaagttgtacaaa 4148701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 34838264 - 34838316
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||||||||||    
T  34838264 aataagaagataatgtgagtatgagagagaagattgtacaaaagttgtacaaa 34838316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 27300423 - 27300371
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||| | ||||||||||| ||||||||||||||||||||    
T  27300423 aataagaagataatgtgaatatgagagagaaagttgtacaaaagttgtacaaa 27300371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 57
Target Start/End: Original strand, 21649168 - 21649214
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    |||||||||||||| ||| ||||||| ||||||||||||||||||||    
T  21649168 aagataatgtgagtatgaaagagaaagttgtacaaaagttgtacaaa 21649214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 5742651 - 5742700
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||||||| ||||||| ||| |||||||||||||||||    
T  5742651 aataaaaacataatgtgagtatgagagataaagttgtacaaaagttgtac 5742700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 32674226 - 32674271
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagtt 50  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||    
T  32674226 aataaaaacataatgtgagtatgagagagaaagttgtacaaaagtt 32674271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 37784368 - 37784413
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagtt 50  Q
    |||||||| ||||| ||||| |||||||||||||||||||||||||    
T  37784368 aataaaaacataatatgagtatgagagagaaaattgtacaaaagtt 37784413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 40459756 - 40459801
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagtt 50  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||||    
T  40459756 aataaaaatataatgtgagtatgagagagaaagttgtacaaaagtt 40459801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 6243111 - 6243045
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||| ||||||||||    |||||||||||| |||||||    
T  6243111 aataagaagataatgtgagtatgagagagaaagttgtacaaaaatgattgtacaaatatcatttctc 6243045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 13924088 - 13924022
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||  ||||||||||| ||||||||||   ||||||||||||| |||||||    
T  13924088 aataagaagataatgtgagcatgagagagaaagttgtacaaaaatggttgtacaaatatcatttctc 13924022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 22203209 - 22203261
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||| ||||| ||||||| || |||||||||||||||||||||    
T  22203209 aataagaagataatatgagtatgagagaaaatattgtacaaaagttgtacaaa 22203261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 22836133 - 22836181
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    ||||| |||||||||||||| ||||||||||| |||||||||| |||||    
T  22836133 aataagaagataatgtgagtatgagagagaaagttgtacaaaatttgta 22836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 35701821 - 35701873
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||||||||||  |||||| ||||||||||  ||||||||||||||||||||    
T  35701821 aataaaaagatatcgtgagtatgagagagaaggttgtacaaaagttgtacaaa 35701873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 37294671 - 37294607
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaag-ttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||||||||  ||||||||||| || ||||||||| |||||||    
T  37294671 aataagaagataatgtgagtatgagagagaaggttgtacaaaagtttttacaaatatcatttctc 37294607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 38939183 - 38939249
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    |||||||| ||||||||||| ||||||||||| |||||||||   ||||||| |||||| |||||||    
T  38939183 aataaaaacataatgtgagtatgagagagaaagttgtacaaaaatagttgtagaaatatcatttctc 38939249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 9048310 - 9048357
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||||| ||||||||||| ||||||||||||||||  |||||||||    
T  9048310 aataaaaacataatgtgagtatgagagagaaaattgtcaaaaagttgt 9048357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Complemental strand, 22719515 - 22719468
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||  |||||||||||||||| ||||||||||||    
T  22719515 taaaaagataatgtgagcatgagagagaaaattgtcacaaaagttgta 22719468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 31249520 - 31249567
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgta 53  Q
    |||||||||||||||||| ||||||| |||||||| ||||||||||||    
T  31249520 taaaaagataatgtgagtatgagagaaaaaattgtcacaaaagttgta 31249567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 43605647 - 43605694
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    ||||| |||||||||||||| |||||||||| ||||||||| ||||||    
T  43605647 aataagaagataatgtgagtatgagagagaagattgtacaacagttgt 43605694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 68
Target Start/End: Complemental strand, 41776246 - 41776186
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    ||||| |||||||| ||||||||||| |||||||||   |||||||||||||| |||||||    
T  41776246 aagatgatgtgagtatgagagagaaagttgtacaaaaatagttgtacaaatatcatttctc 41776186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 28156280 - 28156231
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtac 54  Q
    |||||||| ||||||| ||| ||||||||||| |||||||||| ||||||    
T  28156280 aataaaaacataatgtaagtatgagagagaaagttgtacaaaaattgtac 28156231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 11 - 68
Target Start/End: Original strand, 35967406 - 35967463
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaatataatttctc 68  Q
    |||||||| ||| | ||||||||||| ||||  ||||||||||||||||| |||||||    
T  35967406 aagataatatgaatatgagagagaaagttgtcaaaaagttgtacaaatatcatttctc 35967463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 69
Target Start/End: Complemental strand, 37471720 - 37471653
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctcc 69  Q
    ||||| ||||||||||||||  |||||||||| ||||||||||    |||||||||||| ||||||||    
T  37471720 aataagaagataatgtgagtacgagagagaaagttgtacaaaaatgattgtacaaatatcatttctcc 37471653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 57
Target Start/End: Complemental strand, 42688497 - 42688452
Alignment:
Q  12 agataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||||| ||||| |||||||||||||| |||||||||| ||||||    
T  42688497 agataatatgagtatgagagagaaaattatacaaaagttatacaaa 42688452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 7559395 - 7559359
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  7559395 aataaaaacataatgtgagtatgagagagaaaattgt 7559359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 7678809 - 7678773
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  7678809 aataaaaatataatgtgagtatgagagagaaaattgt 7678773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 9549196 - 9549240
Alignment:
Q  9 aaaagataatgtgagtttgagagagaaaattgt-acaaaagttgt 52  Q
    |||| ||||||||||| |||||||||||||||| |||||||||||    
T  9549196 aaaaaataatgtgagtatgagagagaaaattgtcacaaaagttgt 9549240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 9738687 - 9738723
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    ||||||| |||||||||||| ||||||||||||||||    
T  9738687 aataaaaggataatgtgagtatgagagagaaaattgt 9738723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Original strand, 14233638 - 14233704
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaa---agttgtacaaatataatttctc 68  Q
    ||||| ||||||||| |||| ||||||||||| ||||| |||   |||||||||||||| |||||||    
T  14233638 aataagaagataatgcgagtatgagagagaaagttgtaaaaaaatagttgtacaaatatcatttctc 14233704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 18550056 - 18550004
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||| ||||| ||||||||||  ||||||||||||| ||||||    
T  18550056 aataagaagataatatgagtatgagagagaatgttgtacaaaagttatacaaa 18550004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 23709053 - 23709001
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||| ||||  ||||||||||||| ||||||    
T  23709053 aataagaagataatgtgagtatgagatagaaggttgtacaaaagttatacaaa 23709001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 24616399 - 24616363
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  24616399 aataaaaatataatgtgagtatgagagagaaaattgt 24616363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 25430723 - 25430657
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| |||||||||||||| ||||| ||||  ||||||||||   ||||||||||||| |||||||    
T  25430723 aataagaagataatgtgagtatgagatagaaggttgtacaaaaatggttgtacaaatatcatttctc 25430657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 35819014 - 35818978
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  35819014 aataaaaagataatgtgagtatgagagagaaagttgt 35818978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 44001133 - 44001085
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgta 53  Q
    |||||||| || |||||||| ||||||||||| |||||||||| |||||    
T  44001133 aataaaaacatgatgtgagtatgagagagaaagttgtacaaaaattgta 44001085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0014 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 3 - 57
Target Start/End: Complemental strand, 145140 - 145086
Alignment:
Q  3 ataataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||||| |||||||||||||| ||||||||||  ||||||||||||||||||||    
T  145140 ataataagaagataatgtgagtatgagagagaatgttgtacaaaagttgtacaaa 145086  T

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Target: scaffold0514 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0514
Description:

Target: scaffold0514; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 5 - 57
Target Start/End: Original strand, 1839 - 1891
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| |||||||||| |||||||||||||| ||||||    
T  1839 aataagaagataatgtgagtatgagagagaagattgtacaaaagttatacaaa 1891  T

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Target: scaffold0131 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 15528 - 15575
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgt 52  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||    
T  15528 aataaaaacataatgtgagtttgagagagaaaattgtcaaaaagttgt 15575  T

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Target: scaffold0276 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0276
Description:

Target: scaffold0276; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 68
Target Start/End: Complemental strand, 1720 - 1658
Alignment:
Q  7 taaaaagataatgtgagtttgagagagaaaattgt-acaaaagttgtacaaatataatttctc 68  Q
    ||||| ||||||| |||| |||||||||||||||| ||||||||||| ||||||| |||||||    
T  1720 taaaatgataatgagagtatgagagagaaaattgtcacaaaagttgttcaaatatcatttctc 1658  T

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Target: scaffold0024 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 57
Target Start/End: Complemental strand, 48731 - 48679
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaagttgtacaaa 57  Q
    ||||| |||||||||||||| ||||||||||  |||||||||| |||||||||    
T  48731 aataagaagataatgtgagtatgagagagaaggttgtacaaaaattgtacaaa 48679  T

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Target: scaffold0592 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0592
Description:

Target: scaffold0592; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 987 - 945
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    |||||||| ||||||||||| |||||||||||||| |||||||    
T  987 aataaaaacataatgtgagtatgagagagaaaattatacaaaa 945  T

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Target: scaffold0018 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 48258 - 48221
Alignment:
Q  9 aaaagataatgtgagtttgagagagaaaattgtacaaa 46  Q
    |||||||||||||||| ||||||||||| |||||||||    
T  48258 aaaagataatgtgagtatgagagagaaagttgtacaaa 48221  T

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Target: scaffold0508 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0508
Description:

Target: scaffold0508; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 11530 - 11566
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgt 41  Q
    |||||||| ||||||||||| ||||||||||||||||    
T  11530 aataaaaacataatgtgagtatgagagagaaaattgt 11566  T

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Target: scaffold0286 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 68
Target Start/End: Complemental strand, 17115 - 17049
Alignment:
Q  5 aataaaaagataatgtgagtttgagagagaaaattgtacaaaa---gttgtacaaatataatttctc 68  Q
    ||||| ||||||||| |||| ||||||| ||| ||||||||||   ||||||||||||| |||||||    
T  17115 aataagaagataatgcgagtatgagagataaagttgtacaaaaatggttgtacaaatatcatttctc 17049  T

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Target: scaffold0058 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 47
Target Start/End: Complemental strand, 3014 - 2978
Alignment:
Q  11 aagataatgtgagtttgagagagaaaattgtacaaaa 47  Q
    |||||||||||||| ||||||| ||||||||||||||    
T  3014 aagataatgtgagtatgagagaaaaaattgtacaaaa 2978  T

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