View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7719_high_6 (Length: 367)
Name: NF7719_high_6
Description: NF7719
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7719_high_6 |
 | |
|
| [»] chr5 (5 HSPs) |
| |
|
| [»] chr4 (14 HSPs) |
| |
|
| [»] chr2 (15 HSPs) |
| |
|
| [»] scaffold0074 (1 HSPs) |
| | |
|
Alignment Details
Target: chr5 (Bit Score: 323; Significance: 0; HSPs: 5)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 26 - 367
Target Start/End: Complemental strand, 41718727 - 41718385
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718727 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
41718628 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
41718627 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
41718528 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatat-ttttctctcactatctaaac |
324 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
41718527 |
ctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaac |
41718428 |
T |
|
| Q |
325 |
aagctttacttgttcttgtgttgttactgatttgggatgagta |
367 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41718427 |
aagctttacttgttcttgtgttgttactgatttgggatgagta |
41718385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 26 - 367
Target Start/End: Complemental strand, 41723453 - 41723111
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723453 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
41723354 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
41723353 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
41723254 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatat-ttttctctcactatctaaac |
324 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
41723253 |
ctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaac |
41723154 |
T |
|
| Q |
325 |
aagctttacttgttcttgtgttgttactgatttgggatgagta |
367 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
41723153 |
aagctttacttgttcttgtgttgttactgatttgggatgagta |
41723111 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 308; E-Value: 1e-173
Query Start/End: Original strand, 26 - 364
Target Start/End: Complemental strand, 34360273 - 34359934
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
34360273 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtagaaacccctcaaca |
34360174 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
34360173 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
34360074 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatat-ttttctctcactatctaaac |
324 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||| |||| |||||||||| |||||||||||||||||||| |
|
|
| T |
34360073 |
ctctcttataaataggagaatactaactaacacaaactaggagaaatctcacaggagaaactaatttttctctctatattttttctctcactatctaaac |
34359974 |
T |
|
| Q |
325 |
aagctttacttgttcttgtgttgttactgatttgggatga |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34359973 |
aagctttacttgttcttgtgttgttactgatttgggatga |
34359934 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 45 - 364
Target Start/End: Complemental strand, 34352546 - 34352226
Alignment:
| Q |
45 |
aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac |
144 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352546 |
aaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccac |
34352447 |
T |
|
| Q |
145 |
ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggaga |
244 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352446 |
ggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctcttataaataggaga |
34352347 |
T |
|
| Q |
245 |
atacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatat-ttttctctcactatctaaacaagctttacttgttcttgt |
343 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||||||| |||| |||||||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
34352346 |
atactaactaacacaaactaggagaaatctcacaggagaaactaatttttctctctatattttttctctcactatctaaacaagctttacttgttcttgt |
34352247 |
T |
|
| Q |
344 |
gttgttactgatttgggatga |
364 |
Q |
| |
|
||||||||||||||||||||| |
|
|
| T |
34352246 |
gttgttactgatttgggatga |
34352226 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 26 - 364
Target Start/End: Original strand, 29585300 - 29585640
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
29585300 |
tgttaggtatcagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
29585399 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| |
|
|
| T |
29585400 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaagagagtacaattaccact |
29585499 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttt-ctctcacta-tctaaa |
323 |
Q |
| |
|
||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||| |||||||||||||| ||||||||| |||| | |
|
|
| T |
29585500 |
ctctcttataaataggagaatactaactaatacaaactaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactactctaga |
29585599 |
T |
|
| Q |
324 |
caagctttacttgttcttgtgttgttactgatttgggatga |
364 |
Q |
| |
|
||||||||||||||| ||||||||||||||||||||||||| |
|
|
| T |
29585600 |
caagctttacttgttgttgtgttgttactgatttgggatga |
29585640 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 323; Significance: 0; HSPs: 14)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 26 - 367
Target Start/End: Original strand, 48701821 - 48702163
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48701821 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
48701920 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
48701921 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
48702020 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaaac |
324 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
48702021 |
ctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaac |
48702120 |
T |
|
| Q |
325 |
aagctttacttgttcttgtgttgttactgatttgggatgagta |
367 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48702121 |
aagctttacttgttcttgtgttgttactgatttgggatgagta |
48702163 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 26 - 362
Target Start/End: Complemental strand, 42266220 - 42265883
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266220 |
tgttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
42266121 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42266120 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
42266021 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatat-ttttctctcactatctaaac |
324 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
42266020 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcactatctaaac |
42265921 |
T |
|
| Q |
325 |
aagctttacttgttcttgtgttgttactgatttgggat |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42265920 |
aagctttacttgttcttgtgttgttactgatttgggat |
42265883 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 26 - 362
Target Start/End: Complemental strand, 42270939 - 42270602
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270939 |
tgttagataccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
42270840 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270839 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
42270740 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatat-ttttctctcactatctaaac |
324 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
42270739 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcactatctaaac |
42270640 |
T |
|
| Q |
325 |
aagctttacttgttcttgtgttgttactgatttgggat |
362 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
42270639 |
aagctttacttgttcttgtgttgttactgatttgggat |
42270602 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 313; E-Value: 1e-176
Query Start/End: Original strand, 32 - 363
Target Start/End: Original strand, 24520031 - 24520363
Alignment:
| Q |
32 |
gtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag |
131 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
24520031 |
gtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataag |
24520130 |
T |
|
| Q |
132 |
gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctct |
231 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
24520131 |
gggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccactctctct |
24520230 |
T |
|
| Q |
232 |
tataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaaacaagctt |
330 |
Q |
| |
|
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
24520231 |
tataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctt |
24520330 |
T |
|
| Q |
331 |
tacttgttcttgtgttgttactgatttgggatg |
363 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |
|
|
| T |
24520331 |
tacttgttcttgtgttgttactgatttgggatg |
24520363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 26 - 367
Target Start/End: Original strand, 48697131 - 48697474
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697131 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
48697230 |
T |
|
| Q |
126 |
aataaggggaaaa-aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
48697231 |
aataaggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
48697330 |
T |
|
| Q |
225 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaaa |
323 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
48697331 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaa |
48697430 |
T |
|
| Q |
324 |
caagctttacttgttcttgtgttgttactgatttgggatgagta |
367 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
48697431 |
caagctttacttgttcttgtgttgttactgatttgggatgagta |
48697474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 26 - 309
Target Start/End: Original strand, 30945477 - 30945761
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945477 |
tgttaggtatcagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
30945576 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
|||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30945577 |
aataaggg-aaaaaatcacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggagagtacaattaccact |
30945675 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
30945676 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttc |
30945761 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 235; E-Value: 1e-130
Query Start/End: Original strand, 26 - 309
Target Start/End: Original strand, 30950183 - 30950467
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
30950183 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagataagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
30950282 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
30950283 |
aataaggg-aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagaacctctctctaaatacaaggaaagtacaattaccact |
30950381 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
30950382 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttc |
30950467 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 26 - 309
Target Start/End: Complemental strand, 10427597 - 10427323
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
|
|
| T |
10427597 |
tgttaggtaccagagtaacagaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgcggaaacccctcaaca |
10427498 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
|||||||||||||||| |||||| || |||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||||| | |
|
|
| T |
10427497 |
aataaggggaaaaaactacggggaaaaagtagataactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattacc-c |
10427399 |
T |
|
| Q |
225 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
10427398 |
tctctctt-gaaataggagaatactaac--------actaggagaaacctcacaggagaaactatatttcctctctatatttttc |
10427323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 39 - 234
Target Start/End: Complemental strand, 48783031 - 48782850
Alignment:
| Q |
39 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaa |
138 |
Q |
| |
|
|||| |||||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||| ||||||||| |||||||||||| ||||||| |
|
|
| T |
48783031 |
agtatcaaaatattatcacgcgattaaaataagaaacgagaaaacaggaactgaacacacaatattt-acgtggaaatttctcaacaaataaagggaaaa |
48782933 |
T |
|
| Q |
139 |
aaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttat |
234 |
Q |
| |
|
| || |||| ||||||||||||||||||||||||||| | |||||||||||||||||| | ||||||||||||||||||||||||| |
|
|
| T |
48782932 |
a--catgggg---------agaactttcactaagtggaagaaattagatgacctctctctaaatacatg--gagtacaattaccactctctcttat |
48782850 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 150 - 291
Target Start/End: Complemental strand, 1979375 - 1979240
Alignment:
| Q |
150 |
aagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaataca |
249 |
Q |
| |
|
||||||||| |||||||| |||| ||||||||||||| ||||||||| |||| ||||||| ||| | |||||||||||||||||||| |||||||| |
|
|
| T |
1979375 |
aagagtagataactttcagtaagaggaagaaattacacgacctctct--aaatgcaaggagggtatatttaccactctctcttataaacaggagaat--- |
1979281 |
T |
|
| Q |
250 |
aactaacacaaactaggagaaacctcacaggagaaactattt |
291 |
Q |
| |
|
|||| ||| ||| ||||||||||||||| |||||||||| |
|
|
| T |
1979280 |
-actagcactaaccaggagaaacctcacatttgaaactattt |
1979240 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 79 - 177
Target Start/End: Complemental strand, 17248112 - 17248015
Alignment:
| Q |
79 |
aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaa |
177 |
Q |
| |
|
||||||| |||| || ||||||||||| || |||||| |||| || |||||||||||||||||||| || ||||||| |||||||||| ||||||||| |
|
|
| T |
17248112 |
aaaagagaaactaaatacacaatattt-acatggaaatcccttaataaataaggggaaaaaaccaccggataagagtatagaactttcattaagtggaa |
17248015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 28 - 105
Target Start/End: Original strand, 36615361 - 36615438
Alignment:
| Q |
28 |
ttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt |
105 |
Q |
| |
|
|||||||| ||||||| ||||||||||| | ||| |||||||||| | |||||||||| ||| ||||| ||| ||||| |
|
|
| T |
36615361 |
ttaggtactagagtaataaaatattatcgcacagttaaaataagatatgagaaaagagaaaccgaacatacattattt |
36615438 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 105
Target Start/End: Complemental strand, 30165968 - 30165900
Alignment:
| Q |
37 |
agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattt |
105 |
Q |
| |
|
|||||||||||||| |||||| || ||||||||||| | ||||||| | ||| |||||||| ||||||| |
|
|
| T |
30165968 |
agagtaacaaaataatatcacacaactaaaataagatatgagaaaaaatgaattgaacacataatattt |
30165900 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 130
Target Start/End: Complemental strand, 1979604 - 1979567
Alignment:
| Q |
92 |
aacacacaatattttacgtggaaacccctcaacaaataa |
130 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
1979604 |
aacacacaatattt-acgtggaaacccctcaacaaataa |
1979567 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 323; Significance: 0; HSPs: 11)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 323; E-Value: 0
Query Start/End: Original strand, 26 - 363
Target Start/End: Original strand, 5823275 - 5823613
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823275 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
5823374 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
|
|
| T |
5823375 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccact |
5823474 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaaac |
324 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
5823475 |
ctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaac |
5823574 |
T |
|
| Q |
325 |
aagctttacttgttcttgtgttgttactgatttgggatg |
363 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5823575 |
aagctttacttgttcttgtgttgttactgatttgggatg |
5823613 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 317; E-Value: 1e-179
Query Start/End: Original strand, 25 - 364
Target Start/End: Original strand, 5818512 - 5818852
Alignment:
| Q |
25 |
atgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818512 |
atgttaggtaccagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
5818611 |
T |
|
| Q |
125 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
5818612 |
taataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattaccac |
5818711 |
T |
|
| Q |
225 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaaa |
323 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
5818712 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaa |
5818811 |
T |
|
| Q |
324 |
caagctttacttgttcttgtgttgttactgatttgggatga |
364 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5818812 |
caagctttacttgttcttgtgttgttactgatttgggatga |
5818852 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 25 - 318
Target Start/End: Complemental strand, 54546201 - 54545906
Alignment:
| Q |
25 |
atgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||| |
|
|
| T |
54546201 |
atgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagatgagaaaagaggaactgaacatacaatattt-acgtggaaacccctcaac |
54546103 |
T |
|
| Q |
125 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
54546102 |
aaataaggggaaaaaaccacggggctagagtagagaactttcactaagtggatgaaattacaggacctctctctaactacaaggagagtacaattaccac |
54546003 |
T |
|
| Q |
225 |
tctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttt-ctctcactat |
318 |
Q |
| |
|
|||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
54546002 |
tctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
54545906 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 216; E-Value: 1e-118
Query Start/End: Original strand, 26 - 367
Target Start/End: Original strand, 2817263 - 2817593
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2817263 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
2817362 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattacca-- |
223 |
Q |
| |
|
||||| ||||||||||||| ||||||||||| |||||| |||||||||||||||||||||| || |||||||||||||||||||||||||||| |||| |
|
|
| T |
2817363 |
aataa-gggaaaaaaccacagggcaagagtaaagaactctcactaagtggaagaaattacaagaactctctctaaatacaaggagagtacaatcaccact |
2817461 |
T |
|
| Q |
224 |
ctctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcacta-tcta |
321 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| ||||||||||| || ||| |
|
|
| T |
2817462 |
ctctctcttataaataggagaatactaactaatacaaact--------------aggagaaactatttttcctctctatattttttctctcattacccta |
2817547 |
T |
|
| Q |
322 |
aacaagctttacttgttcttgtgttgttactgatttgggatgagta |
367 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
2817548 |
aacaagttttacttgttcttgtgttgttactgatttgggatgagta |
2817593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 25 - 179
Target Start/End: Original strand, 24659135 - 24659287
Alignment:
| Q |
25 |
atgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
124 |
Q |
| |
|
||||||||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| |
|
|
| T |
24659135 |
atgttaggtaccagagtaataaaatattatcacacagctaaaataagagatgagaaaagaggaactgaacacacaacattttacgtggaaacccctcaac |
24659234 |
T |
|
| Q |
125 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga |
179 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
24659235 |
aaataaggggaaaaaaccacggggcaagagt--agaactttcactaagtggaaga |
24659287 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 34 - 140
Target Start/End: Complemental strand, 4579360 - 4579254
Alignment:
| Q |
34 |
accagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg |
133 |
Q |
| |
|
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4579360 |
accagagtaacaaaatattatcacgcaactaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggg |
4579261 |
T |
|
| Q |
134 |
gaaaaaa |
140 |
Q |
| |
|
||||||| |
|
|
| T |
4579260 |
gaaaaaa |
4579254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 40 - 212
Target Start/End: Original strand, 31204781 - 31204950
Alignment:
| Q |
40 |
gtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaa |
139 |
Q |
| |
|
|||||||||||||| ||||||| ||||| |||||| || |||||||||||||||| |||||||||| ||||||||||||||||||||||||| ||||||| |
|
|
| T |
31204781 |
gtaacaaaatattagcacgcagttaaaagaagagatga-aaaagaggaactgaactcacaatattt-acgtggaaacccctcaacaaataagaggaaaaa |
31204878 |
T |
|
| Q |
140 |
accacgg-ggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag |
212 |
Q |
| |
|
| ||||| ||||| ||||||||||||||||||||||| | |||||||| || ||||||||||| |||||||| |
|
|
| T |
31204879 |
atcacggaggcaatagtagagaactttcactaagtgggaaaaattacaaaac--ctctctaaatataaggagag |
31204950 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 179 - 309
Target Start/End: Original strand, 24671173 - 24671293
Alignment:
| Q |
179 |
aaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggagaaacctcaca |
278 |
Q |
| |
|
|||||||| ||| ||||||||||||||||||||| ||||||| ||||||||| |||||||||||||| ||| |||||||||||||||||| |
|
|
| T |
24671173 |
aaattacaagacttctctctaaatacaaggagagacaaattacc-ctctctcttg-aaataggagaatactaac--------actaggagaaacctcaca |
24671262 |
T |
|
| Q |
279 |
ggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
||||||||||| ||||||||||||||||||| |
|
|
| T |
24671263 |
ggagaaactatatttcctctctatatttttc |
24671293 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 64 - 221
Target Start/End: Complemental strand, 35977258 - 35977103
Alignment:
| Q |
64 |
aaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtaga-gaac |
162 |
Q |
| |
|
|||||||||| |||||||||| || |||||| ||||||||| |||| ||| || |||||| ||| |||||||| ||| |||||||||| | || |
|
|
| T |
35977258 |
aaaataagaggtgagaaaagagaaattgaacaaacaatattt-acgtaaaaaaccatcaacatata--gggaaaaactcacttggcaagagtaaaagagt |
35977162 |
T |
|
| Q |
163 |
tttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattac |
221 |
Q |
| |
|
||||||||||||||| |||||||| ||| ||||||||||||||||||||| |||||||| |
|
|
| T |
35977161 |
tttcactaagtggaaaaaattacaagacttctctctaaatacaaggagagaacaattac |
35977103 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 192 - 309
Target Start/End: Complemental strand, 4579241 - 4579134
Alignment:
| Q |
192 |
tctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactattt |
291 |
Q |
| |
|
||||||||||||||||||||| ||||||| ||||||| | |||||||||||||| |||| ||| |||||||||||||||||||||||| | |
|
|
| T |
4579241 |
tctctctaaatacaaggagagacaaattacc-ctctctcgtg-aaataggagaatactaact--------ctatgagaaacctcacaggagaaactatat |
4579152 |
T |
|
| Q |
292 |
ttcctctctatatttttc |
309 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
4579151 |
ttcctctctatatttttc |
4579134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 26 - 70
Target Start/End: Complemental strand, 25877130 - 25877086
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataa |
70 |
Q |
| |
|
|||||||||||||| ||||| |||||||| ||||| ||||||||| |
|
|
| T |
25877130 |
tgttaggtaccagaataacataatattattacgcaactaaaataa |
25877086 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 322; Significance: 0; HSPs: 11)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 322; E-Value: 0
Query Start/End: Original strand, 24 - 364
Target Start/End: Original strand, 26976129 - 26976470
Alignment:
| Q |
24 |
aatgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaa |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976129 |
aatgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaa |
26976228 |
T |
|
| Q |
124 |
caaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattacca |
223 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
26976229 |
caaataaggggaaaaaaccaaggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaattacca |
26976328 |
T |
|
| Q |
224 |
ctctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaa |
322 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
26976329 |
ctctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaa |
26976428 |
T |
|
| Q |
323 |
acaagctttacttgttcttgtgttgttactgatttgggatga |
364 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
26976429 |
acaagctttacttgttcttgtgttgttactgatttgggatga |
26976470 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 26 - 363
Target Start/End: Complemental strand, 1235018 - 1234680
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1235018 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
1234919 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
1234918 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
1234819 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatat-ttttctctcactatctaaac |
324 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
1234818 |
ctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaac |
1234719 |
T |
|
| Q |
325 |
aagctttacttgttcttgtgttgttactgatttgggatg |
363 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1234718 |
aagctttacttgttcttgtgttgttactgatttgggatg |
1234680 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 25 - 362
Target Start/End: Original strand, 27873989 - 27874327
Alignment:
| Q |
25 |
atgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27873989 |
atgttaggtaccagagtaacaaaatattatcacgcatctaaaataagagaagagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
27874088 |
T |
|
| Q |
125 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874089 |
aaataaagggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
27874188 |
T |
|
| Q |
225 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaaa |
323 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
27874189 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaagctatttttcctctctatattttttctctcactatctaaa |
27874288 |
T |
|
| Q |
324 |
caagctttacttgttcttgtgttgttactgatttgggat |
362 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27874289 |
caagctttacttgttcttgtgttgttactgatttgggat |
27874327 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 26 - 309
Target Start/End: Original strand, 27878709 - 27878994
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878709 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
27878808 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
27878809 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
27878908 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaa--actaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||||| |||| ||||||||||||||| |
|
|
| T |
27878909 |
ctctcttataaataggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttc |
27878994 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 26 - 309
Target Start/End: Complemental strand, 18968194 - 18967920
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |
|
|
| T |
18968194 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaatacataatattttacgtggaaacccctcaaca |
18968095 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| ||||| | | |
|
|
| T |
18968094 |
aataaggggaaaaaaccacggggcaagagtagaaaactttcactaagtggaagacaattacaagacttctctctaaatacaaggagagacaaattagc-c |
18967996 |
T |
|
| Q |
225 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
|||||| | |||||||||||||| ||| |||||||||||||||||| |||||||||| |||||||| |||||||||| |
|
|
| T |
18967995 |
tctctcat-gaaataggagaatactaac--------actaggagaaacctcacaagagaaactatatttcctctttatatttttc |
18967920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 26 - 291
Target Start/End: Complemental strand, 30986829 - 30986563
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaa---cccctca |
122 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||| ||||||| |
|
|
| T |
30986829 |
tgttaggtatcagagtaacaaaatattatcacgtagctaaaataagagacgagaaaagaggaactgaacgcacaatattt-acgtggaaagtacccctca |
30986731 |
T |
|
| Q |
123 |
acaaataaggggaaaaaa--ccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaatta |
220 |
Q |
| |
|
|||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||| |
|
|
| T |
30986730 |
acaaataaggaaaaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattgcaggacctctctctaaatgcaaggagagtacaatta |
30986631 |
T |
|
| Q |
221 |
ccactctctcttataaataggagaatacaaactaacacaaactaggagaaacctca-caggagaaactattt |
291 |
Q |
| |
|
|||||||||||| ||||||| ||||| ||| |||| | ||||||||||||||| |||||||||||||| |
|
|
| T |
30986630 |
ccactctctcttgtaaatagaagaat----actgacactacctaggagaaacctcatgaggagaaactattt |
30986563 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 72 - 308
Target Start/End: Complemental strand, 30966923 - 30966689
Alignment:
| Q |
72 |
agacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa-aaaaccacggggcaagagtagagaactttcacta |
170 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||| || |||| ||||||||||||||||||||||||||||| |
|
|
| T |
30966923 |
agacgagaaaagaggaactgaacacacaatattt-acgtggaaacccatcaacaaataagggaaataaaatcacggggcaagagtagagaactttcacta |
30966825 |
T |
|
| Q |
171 |
agtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatacaaactaacacaaactaggagaa |
270 |
Q |
| |
|
||||||||||||| ||| |||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||| ||| | | | ||||||||| |
|
|
| T |
30966824 |
agtggaagaaattgcagaacctctctctaaatgcaaggagagtacaattaccactctctcttgtaaatagaagaat----actgaggctacctaggagaa |
30966729 |
T |
|
| Q |
271 |
acctcac-aggagaaactattt-ttcctctctatattttt |
308 |
Q |
| |
|
||||||| || ||||||||||| || |||||||||||||| |
|
|
| T |
30966728 |
acctcacaagtagaaactatttctttctctctatattttt |
30966689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 31 - 217
Target Start/End: Complemental strand, 21966860 - 21966677
Alignment:
| Q |
31 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
130 |
Q |
| |
|
||||||| |||||| ||| ||||||||||||||||| ||| | | ||||||||||||||| |||| | ||||||| | ||||||||||||||| |||||| |
|
|
| T |
21966860 |
ggtaccaaagtaacgaaacattatcacgcagctaaa-taacatatgagaaaagaggaactaaacataaaatattt-atgtggaaacccctcaataaataa |
21966763 |
T |
|
| Q |
131 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaa |
217 |
Q |
| |
|
|||||||| | | ||||||||||||||||||||||||||| |||||||||||| | ||||||||||||| | ||| |||||||||| |
|
|
| T |
21966762 |
agggaaaaatc-atggggcaagagtagagaactttcactaaatggaagaaattataagacctctctctaatttcaaagagagtacaa |
21966677 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 45 - 194
Target Start/End: Original strand, 23012520 - 23012667
Alignment:
| Q |
45 |
aaaatattatcacgcagctaaaataagagacgag-aaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaacca |
143 |
Q |
| |
|
|||||||||||||||| ||||||||||||||||| |||||| ||| |||||||||| || ||||||||||||| | || |||||| | ||| |||||||| |
|
|
| T |
23012520 |
aaaatattatcacgcaactaaaataagagacgagaaaaagaagaattgaacacacatta-tttacgtggaaactcgtc-acaaattaaggggaaaaacca |
23012617 |
T |
|
| Q |
144 |
cggggcaagagtagagaactttcactaagtggaagaaattacaggacctct |
194 |
Q |
| |
|
||||||||||||||||||||||||||||| ||||||| || ||||||| |
|
|
| T |
23012618 |
-tgggcaagagtagagaactttcactaagtgagagaaatttcaagacctct |
23012667 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 77
Target Start/End: Complemental strand, 30967725 - 30967674
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacga |
77 |
Q |
| |
|
||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30967725 |
tgttaggtaccagagtaacaaaatattatcaagcagctaaaataagagacga |
30967674 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 259 - 319
Target Start/End: Original strand, 6174273 - 6174333
Alignment:
| Q |
259 |
aaactaggagaaacctcacaggagaaactatttttcctctctatatttttctctcactatc |
319 |
Q |
| |
|
||||||| |||| ||| | |||||||||||| |||||| |||||||||||||||||||||| |
|
|
| T |
6174273 |
aaactagaagaatccttataggagaaactatatttcctttctatatttttctctcactatc |
6174333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 320; Significance: 1e-180; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 320; E-Value: 1e-180
Query Start/End: Original strand, 25 - 363
Target Start/End: Original strand, 9439371 - 9439710
Alignment:
| Q |
25 |
atgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
124 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439371 |
atgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
9439470 |
T |
|
| Q |
125 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||| |
|
|
| T |
9439471 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccac |
9439570 |
T |
|
| Q |
225 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaaa |
323 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
9439571 |
tctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaa |
9439670 |
T |
|
| Q |
324 |
caagctttacttgttcttgtgttgttactgatttgggatg |
363 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9439671 |
caagctttacttgttcttgtgttgttactgatttgggatg |
9439710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 319; E-Value: 1e-180
Query Start/End: Original strand, 26 - 363
Target Start/End: Original strand, 9444092 - 9444430
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444092 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
9444191 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||| |
|
|
| T |
9444192 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccact |
9444291 |
T |
|
| Q |
226 |
ctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaaac |
324 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
9444292 |
ctctcttataaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaac |
9444391 |
T |
|
| Q |
325 |
aagctttacttgttcttgtgttgttactgatttgggatg |
363 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
9444392 |
aagctttacttgttcttgtgttgttactgatttgggatg |
9444430 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 43 - 99
Target Start/End: Complemental strand, 4799371 - 4799315
Alignment:
| Q |
43 |
acaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacaca |
99 |
Q |
| |
|
||||||||||||||| | |||||||||||||| |||||||||| || |||||||||| |
|
|
| T |
4799371 |
acaaaatattatcacactgctaaaataagagatgagaaaagagaaattgaacacaca |
4799315 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 314; Significance: 1e-177; HSPs: 15)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 314; E-Value: 1e-177
Query Start/End: Original strand, 35 - 367
Target Start/End: Original strand, 5198664 - 5198997
Alignment:
| Q |
35 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
134 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5198664 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
5198763 |
T |
|
| Q |
135 |
aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttat |
234 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |
|
|
| T |
5198764 |
aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaactacaaggagagtacaaataccactctctcttat |
5198863 |
T |
|
| Q |
235 |
aaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctata-tttttctctcactatctaaacaagctttac |
333 |
Q |
| |
|
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
5198864 |
aaataggagaatactaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttttctctcactatctaaacaagctttac |
5198963 |
T |
|
| Q |
334 |
ttgttcttgtgttgttactgatttgggatgagta |
367 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| |
|
|
| T |
5198964 |
ttgttcttgtgttgttactgatttgggatgagta |
5198997 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 37 - 309
Target Start/End: Complemental strand, 15603183 - 15602911
Alignment:
| Q |
37 |
agagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa |
136 |
Q |
| |
|
||||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
15603183 |
agagtaagaaaatattatcacgcaattgaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaa |
15603084 |
T |
|
| Q |
137 |
aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataa |
236 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| || |||| |||||||||||| ||| |||| ||| |
|
|
| T |
15603083 |
aaaaccacggggcaagagtagagaactttcactaagtagaagaaattacaagacctctctctaaatgcatggagtgtacaattaccattctatcttgtaa |
15602984 |
T |
|
| Q |
237 |
ataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
|||||||||||| ||||||||| |||| ||||||||||| || | || ||| |||| || |||||||||||| |
|
|
| T |
15602983 |
ataggagaatactaactaacacttactaagagaaacctcatagaaaaatctaatttttctttctatatttttc |
15602911 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 825796 - 825632
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
825796 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaaccactcaaca |
825697 |
T |
|
| Q |
126 |
aataaggggaa-aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagga |
189 |
Q |
| |
|
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
825696 |
aataaggggaaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagga |
825632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 26 - 189
Target Start/End: Complemental strand, 830452 - 830288
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
830452 |
tgttaggtaccagagtaacaaaatattatcacgcagttaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
830353 |
T |
|
| Q |
126 |
aataaggggaa-aaaaccacggggcaagagtagagaactttcactaagtggaagaaattacagga |
189 |
Q |
| |
|
||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
830352 |
aataaggggaaaaaaaccacggggcaagagtggagaactttcactaagtggaagaaattacagga |
830288 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 33 - 294
Target Start/End: Complemental strand, 28716070 - 28715815
Alignment:
| Q |
33 |
taccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagg |
132 |
Q |
| |
|
||||||||||||||||||||||||| || ||||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||| |||||||| |
|
|
| T |
28716070 |
taccagagtaacaaaatattatcacacatttaaaataagagacgacaaaagaggaattgaacacacaatattt-acgtggaaacccctcattaaataagg |
28715972 |
T |
|
| Q |
133 |
ggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctctt |
232 |
Q |
| |
|
||||||| |||| | |||| |||||||||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||||||||||| | || | |
|
|
| T |
28715971 |
ggaaaaa-ccacaagagaagaatagagaactttcacaaagtggaagaaattacaggacatctctctaaatgcaaggagagtacaattaccaccgtttcct |
28715873 |
T |
|
| Q |
233 |
ataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttc |
294 |
Q |
| |
|
|||||||||||||| |||||||| | ||||||||||||| ||| ||||||||||||||| |
|
|
| T |
28715872 |
ataaataggagaat----actaacactacctaggagaaaccttacaagagaaactatttttc |
28715815 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 35 - 305
Target Start/End: Original strand, 30396920 - 30397179
Alignment:
| Q |
35 |
ccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataagggg |
134 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||| ||| |||||||||||||||||||||| |
|
|
| T |
30396920 |
ccagagtagcaaaatattatcacgcagctaaaataagagacgagaaaagacgaactgaacacac-atatttt-cgttgaaacccctcaacaaataaggga |
30397017 |
T |
|
| Q |
135 |
aaaaaaccacggggcaagagtagagaac-tttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctctta |
233 |
Q |
| |
|
|||||| ||| |||| |||||||||||| |||||||||||||||||||||||| ||||||| |||| |||||||||||| ||||||| |||| | || |
|
|
| T |
30397018 |
aaaaaatcacagggcgagagtagagaacttttcactaagtggaagaaattacaagacctctttctatatacaaggagagacaaattacc-ctctatgtt- |
30397115 |
T |
|
| Q |
234 |
taaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatt |
305 |
Q |
| |
|
||||||||||||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||| |
|
|
| T |
30397116 |
gaaataggagaatattaac--------actaggagaaatctcacaggagaaactatatttcctctctatatt |
30397179 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 25 - 186
Target Start/End: Original strand, 31592909 - 31593068
Alignment:
| Q |
25 |
atgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
124 |
Q |
| |
|
||||| |||| || ||||||| ||||||||||| ||| || |||||||||||||||||||||||| |||| |||||| |||||||||||| | ||||| |
|
|
| T |
31592909 |
atgttgggtatcaaagtaacataatattatcacacagatagaataagagacgagaaaagaggaacataacatacaataatttacgtggaaatctctcaat |
31593008 |
T |
|
| Q |
125 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattaca |
186 |
Q |
| |
|
|||||| | |||||||||| | |||||||||||||||||||||| | ||||||||||| |
|
|
| T |
31593009 |
aaataa-gaaaaaaaaccac-agataagagtagagaactttcactaaccgaaagaaattaca |
31593068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 95 - 246
Target Start/End: Original strand, 13843865 - 13844014
Alignment:
| Q |
95 |
acacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctct |
194 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||| |||||| | || || |||| |||| ||||| ||||||||||||||||||||||| || |
|
|
| T |
13843865 |
acacaatattt-acgtggaaacccctcaacaaataaggagaaaaatt-ataggttaaaagtatagaattttcattaagtggaagaaattacaggacccct |
13843962 |
T |
|
| Q |
195 |
ctctaaatacaaggagagtacaattaccactctctcttataaataggagaat |
246 |
Q |
| |
|
| |||||||||| ||| || |||||||||||| | ||| |||||||||||| |
|
|
| T |
13843963 |
ttataaatacaagaagaataaaattaccactctattttaaaaataggagaat |
13844014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 25 - 248
Target Start/End: Original strand, 13840239 - 13840456
Alignment:
| Q |
25 |
atgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaac |
124 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||| | || ||||| ||| |||||| ||||||| ||||||| |||||| || || || ||||||| |
|
|
| T |
13840239 |
atgttgggtaccagaataacaaaatattatcacgtaattataataaaagatgagaaaggaggaaccgaacaca--atattt-acatgagaattcctcaac |
13840335 |
T |
|
| Q |
125 |
aaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
||| |||||| |||| || || ||||||||||| || ||| || |||| || |||||||| ||||||||||||||| ||||||||||||||||| | |
|
|
| T |
13840336 |
aaacaagggggaaaa--catggagcaagagtagaaaatttttaccaagtaaaa-aaattacaaaacctctctctaaatataaggagagtacaattacaat |
13840432 |
T |
|
| Q |
225 |
tctctcttataaataggagaatac |
248 |
Q |
| |
|
||||||||| ||||| ||||||| |
|
|
| T |
13840433 |
tctctcttaaaaataaaagaatac |
13840456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 121 - 248
Target Start/End: Complemental strand, 8004292 - 8004167
Alignment:
| Q |
121 |
caacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaatta |
220 |
Q |
| |
|
||||||||||| ||||||| | |||||| | || |||| |||||||||| | |||||||||||| | |||||||| ||||| ||| |||||||||||| |
|
|
| T |
8004292 |
caacaaataagaggaaaaa-caacggggtatgactagaaaactttcactgaatggaagaaattataaaacctctctttaaatgtaagaagagtacaatta |
8004194 |
T |
|
| Q |
221 |
ccactctctcttataaataggagaatac |
248 |
Q |
| |
|
||||||||||||||||||||||||||| |
|
|
| T |
8004193 |
-cactctctcttataaataggagaatac |
8004167 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 830291 - 830209
Alignment:
| Q |
239 |
aggagaatacaaac--taacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttt-ctctcactat |
318 |
Q |
| |
|
|||||||||||||| |||||| | ||||||||||||||||||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
830291 |
aggagaatacaaacactaacactacctaggagaaacctcacaggagaaactaatttttctctctatatttttcctctcactat |
830209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 239 - 318
Target Start/End: Complemental strand, 825635 - 825553
Alignment:
| Q |
239 |
aggagaatacaaac--taacacaaactaggagaaacctcacaggagaaactatttttcctctctatattttt-ctctcactat |
318 |
Q |
| |
|
|||||||||||||| |||||| | |||||||||||||| |||||||||||| |||| |||||||||||||| |||||||||| |
|
|
| T |
825635 |
aggagaatacaaacactaacactacctaggagaaacctcgcaggagaaactaatttttctctctatatttttcctctcactat |
825553 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 46 - 161
Target Start/End: Original strand, 12175768 - 12175881
Alignment:
| Q |
46 |
aaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacg |
145 |
Q |
| |
|
||||||||||||||| ||||||||| ||| || |||| || || ||||||||||||||||| |||||||| ||||| |||||| ||||||||| | |
|
|
| T |
12175768 |
aaatattatcacgcaactaaaataaaagatgataaaaaagaaattgaacacacaatatttt-tgtggaaacatctcaataaataa-tggaaaaaacaatt |
12175865 |
T |
|
| Q |
146 |
gggcaagagtagagaa |
161 |
Q |
| |
|
|| ||||||||||||| |
|
|
| T |
12175866 |
ggacaagagtagagaa |
12175881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 90
Target Start/End: Original strand, 9358158 - 9358207
Alignment:
| Q |
41 |
taacaaaatattatcacgcagctaaaataagagacgagaaaagaggaact |
90 |
Q |
| |
|
|||| ||||||||| |||||||||||| || ||||||||||||| ||||| |
|
|
| T |
9358158 |
taaccaaatattattacgcagctaaaacaacagacgagaaaagaagaact |
9358207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 196
Target Start/End: Complemental strand, 42117876 - 42117769
Alignment:
| Q |
87 |
aactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattaca |
186 |
Q |
| |
|
||||||||| ||||||||| |||| |||||| ||||| |||||||||| ||||||||| | ||| |||||| |||||||| ||| | |||||||| | |
|
|
| T |
42117876 |
aactgaacatacaatattt-acgtagaaacctctcaattaataagggga-aaaaccacgagacaaaagtagataactttcattaaacgagagaaattata |
42117779 |
T |
|
| Q |
187 |
ggacctctct |
196 |
Q |
| |
|
||||||||| |
|
|
| T |
42117778 |
agacctctct |
42117769 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 199; Significance: 1e-108; HSPs: 6)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 31 - 309
Target Start/End: Original strand, 16183636 - 16183905
Alignment:
| Q |
31 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
130 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
16183636 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
16183735 |
T |
|
| Q |
131 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccactctct |
229 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||| ||||||| |||||| |
|
|
| T |
16183736 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaagacctctctctaaatacaaggagagacaaattacc-ctctct |
16183834 |
T |
|
| Q |
230 |
cttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
||| |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
16183835 |
ctt-gaaataggagaatactaac--------actaggagaaacctcacaggagaaactatatttcctctctatatttttc |
16183905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 24 - 317
Target Start/End: Complemental strand, 30235341 - 30235043
Alignment:
| Q |
24 |
aatgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaa |
123 |
Q |
| |
|
|||||| |||||||||||| ||||||||||| || |||||||||||| | | ||||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
30235341 |
aatgttgggtaccagagtagcaaaatattattacacagctaaaataaaaaatgagaaaagaggaactgaacacacaata-tttacgtggaaacccctcaa |
30235243 |
T |
|
| Q |
124 |
caaataagggg-aaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctct-ctaaatacaaggagagtacaattac |
221 |
Q |
| |
|
| ||||||||| ||||||||||||| ||||||||| |||||||| ||| | |||||||||||||||||||||| ||| || ||||||||||||||||| |
|
|
| T |
30235242 |
cgaataaggggaaaaaaaccacgggataagagtagaaaactttcaataactagaagaaattacaggacctctctcctatttataaggagagtacaattac |
30235143 |
T |
|
| Q |
222 |
cactctctcttataaataggagaatacaa--actaacacaaactaggagaaacctca-caggagaaactatttttcctctctatattttt-ctctcacta |
317 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||| | || ||||||||||| ||||||||||| |||| |||||||||||||| ||||||||| |
|
|
| T |
30235142 |
cactctctcttataaataggagaatacaaacactaacactacgtaagagaaacctcataaggagaaactaatttttctctctatatttttcctctcacta |
30235043 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 26 - 248
Target Start/End: Original strand, 8139964 - 8140183
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||| ||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||| |||||||||| | ||||||||||||||||| |
|
|
| T |
8139964 |
tgttgggtaccagagtaacaaaatattatcacacagctaaaataagagatgagaaaagagaaactgaacgcacaatattt-atgtggaaacccctcaaca |
8140062 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccact |
225 |
Q |
| |
|
|||||||||| ||||||| |||| |||| |||| |||||||||| |||||||||||||| | ||||||||||| ||||||||||||| ||||||| || |
|
|
| T |
8140063 |
aataaggggagaaaaccatggggtaagattagaaaactttcactcagtggaagaaattataagacctctctcttaatacaaggagagacaaattacc-ct |
8140161 |
T |
|
| Q |
226 |
ctctcttataaataggagaatac |
248 |
Q |
| |
|
||||||| |||||||||||||| |
|
|
| T |
8140162 |
ctctctt-gaaataggagaatac |
8140183 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 26 - 212
Target Start/End: Original strand, 8138460 - 8138645
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||| |||| ||||||| |||| |||||||||||||||||||||||||||||||||||| |||| |||||||| || || | |||||||||||| |||| |
|
|
| T |
8138460 |
tgttgggtagcagagtatcaaagtattatcacgcagctaaaataagagacgagaaaagaaaaacttaacacacagtaatt-atgtggaaaccccttaaca |
8138558 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag |
212 |
Q |
| |
|
|| ||||||| ||||||||| ||||||| ||||||||||||||||| |||||||||||||| |||||| |||||||||||||||||| |
|
|
| T |
8138559 |
aacaaggggagaaaaccacgaggcaagattagagaactttcactaaatggaagaaattacaagacctccctctaaatacaaggagag |
8138645 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 39 - 184
Target Start/End: Original strand, 5102606 - 5102749
Alignment:
| Q |
39 |
agtaacaaaatattatcacgcagctaaaataagagacgagaaaa-gaggaactgaacacacaatattttacgtggaaacccctcaacaaataaggggaaa |
137 |
Q |
| |
|
||||||||||||||||||| || ||||||||| ||| ||||||| |||| ||| || ||| ||||||| || || |||||| |||||||||||||||||| |
|
|
| T |
5102606 |
agtaacaaaatattatcactcaactaaaataaaagatgagaaaaagagggactaaatacataatattt-acatgaaaaccc-tcaacaaataaggggaaa |
5102703 |
T |
|
| Q |
138 |
aaaccacggggcaagagtagagaactttcactaagtggaagaaatta |
184 |
Q |
| |
|
|| ||| || ||||||||||| |||||| ||||||||| |||||||| |
|
|
| T |
5102704 |
aa-ccatggagcaagagtagataacttttactaagtgggagaaatta |
5102749 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 26 - 141
Target Start/End: Original strand, 36528415 - 36528529
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||| |||| |||||||||||| || || ||||| ||||||||||||| ||||| ||||||| ||||||||||||| |||||||||||||||||| || |
|
|
| T |
36528415 |
tgttgggtatcagagtaacaaagtaaaattacgcaactaaaataagagatgagaatagaggaattgaacacacaata-tttacgtggaaacccctccacg |
36528513 |
T |
|
| Q |
126 |
aataaggggaaaaaac |
141 |
Q |
| |
|
||||||| ||||||| |
|
|
| T |
36528514 |
aataaggaaaaaaaac |
36528529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0074 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0074
Description:
Target: scaffold0074; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 26 - 309
Target Start/End: Original strand, 27226 - 27500
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
27226 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagagaaactgaacacacaatactttacgtggaaacccctcaaca |
27325 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||| |||||||| |
|
|
| T |
27326 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagacaattacaatacttctctctaaatacaaggagagacaaattacca- |
27424 |
T |
|
| Q |
225 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
|||||||| ||||||| |||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
27425 |
tctctctt-gaaataggtgaatactaac--------actaggagaaacctcacaggagaaactatatttcctctctatatttttc |
27500 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 173; Significance: 6e-93; HSPs: 4)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 26 - 309
Target Start/End: Complemental strand, 46191546 - 46191274
Alignment:
| Q |
26 |
tgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaaca |
125 |
Q |
| |
|
||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
46191546 |
tgttaggaaccagagtaacaaaatattatcatgcagctaaaataagagacgagaaaagaggaactgaacaca--atattttacgtggaaacccctcaaca |
46191449 |
T |
|
| Q |
126 |
aataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagagtacaattaccac |
224 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||| ||| |||||||||||| |||||||| ||||||| | |
|
|
| T |
46191448 |
aataaggggaaaaaaccacgggacaagagtagagaactttcactaagtggaagacaattacaagacttctctctaaatagaaggagagacaaattacc-c |
46191350 |
T |
|
| Q |
225 |
tctctcttataaataggagaatacaaactaacacaaactaggagaaacctcacaggagaaactatttttcctctctatatttttc |
309 |
Q |
| |
|
|||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||| ||||||||||||||||||| |
|
|
| T |
46191349 |
tctctctt-gaaataggagaatactaac--------actaggagaaacctcacaggagaaactatatttcctctctatatttttc |
46191274 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 31 - 212
Target Start/End: Original strand, 30697120 - 30697300
Alignment:
| Q |
31 |
ggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaacaaataa |
130 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||| |
|
|
| T |
30697120 |
ggtactagagtaacaaaatattatcacgcagctaacataagagacgagaaaagaggaacttaacacaaaatattt-acgtggaaacccctcaacaaataa |
30697218 |
T |
|
| Q |
131 |
ggggaaaaaaccacggggcaagagtagagaactttcactaagtggaagaaattacaggacctctctctaaatacaaggagag |
212 |
Q |
| |
|
||||||||| ||||| |||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||| |
|
|
| T |
30697219 |
ggggaaaaagccacgtggcaagagtagagaactttcactaagtggaagaaattacaagacctctttctaaatacaaggagag |
30697300 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 24 - 212
Target Start/End: Complemental strand, 4130403 - 4130215
Alignment:
| Q |
24 |
aatgttaggtaccagagtaacaaaatattatcacgcagctaaaataagagacgagaaaagaggaactgaacacacaatattttacgtggaaacccctcaa |
123 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||| ||||||||| ||||||| |
|
|
| T |
4130403 |
aatgttaggtacttgagtaacaaaatattatcacgcaactaaaataagtgacgagaaaagaggaactgaacacacaaaattt-acgtggaaatccctcaa |
4130305 |
T |
|
| Q |
124 |
caaataaggggaaaaaaccacggggcaagagtagagaactttcactaagtggaaga-aattacaggacctctctctaaatacaaggagag |
212 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||||| |
|
|
| T |
4130304 |
caaataaagggaaaaaaccacggggcaagagtagagaactttcactaagtggaagataattacaagacttctctctaaatacaaggagag |
4130215 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 168 - 248
Target Start/End: Original strand, 30674787 - 30674865
Alignment:
| Q |
168 |
ctaagtggaagaaattacaggacctctctctaaatacaaggagagtacaattaccactctctcttataaataggagaatac |
248 |
Q |
| |
|
||||||||||||||||| | ||||||| ||||| | |||||||| ||||||| || |||||||| | ||||||||||||| |
|
|
| T |
30674787 |
ctaagtggaagaaattatacaacctctcactaaaaataaggagagaacaatta-cattctctcttgt-aataggagaatac |
30674865 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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