View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7720_low_13 (Length: 251)

Name: NF7720_low_13
Description: NF7720
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7720_low_13
NF7720_low_13
[»] chr3 (32 HSPs)
chr3 (1-203)||(48712887-48713089)
chr3 (201-251)||(996355-996405)
chr3 (202-251)||(12734110-12734159)
chr3 (198-251)||(19253710-19253763)
chr3 (203-251)||(3206466-3206514)
chr3 (195-251)||(33808072-33808128)
chr3 (202-251)||(16010750-16010799)
chr3 (202-247)||(20498097-20498142)
chr3 (203-248)||(22057651-22057696)
chr3 (198-251)||(51699749-51699802)
chr3 (199-251)||(10139416-10139468)
chr3 (203-251)||(33996761-33996809)
chr3 (201-250)||(29449131-29449180)
chr3 (202-251)||(40246731-40246780)
chr3 (207-251)||(29029898-29029942)
chr3 (201-248)||(6589449-6589496)
chr3 (204-251)||(37820747-37820794)
chr3 (197-251)||(25418248-25418302)
chr3 (201-250)||(35337620-35337670)
chr3 (198-247)||(15494005-15494054)
chr3 (206-250)||(27899277-27899321)
chr3 (207-247)||(48379050-48379090)
chr3 (203-251)||(52114418-52114466)
chr3 (204-251)||(54625481-54625528)
chr3 (201-250)||(19552186-19552235)
chr3 (202-247)||(23753660-23753705)
chr3 (199-248)||(26006023-26006072)
chr3 (196-247)||(36674404-36674456)
chr3 (199-247)||(39842703-39842751)
chr3 (203-247)||(45926990-45927034)
chr3 (204-248)||(50900487-50900531)
chr3 (203-239)||(52079881-52079917)
[»] chr5 (11 HSPs)
chr5 (191-251)||(7016966-7017026)
chr5 (202-251)||(21146955-21147004)
chr5 (202-248)||(43319134-43319180)
chr5 (204-251)||(27459218-27459265)
chr5 (205-251)||(16894128-16894174)
chr5 (206-251)||(5273231-5273276)
chr5 (196-251)||(33656312-33656368)
chr5 (204-250)||(6460682-6460728)
chr5 (201-251)||(32158168-32158218)
chr5 (207-250)||(7948587-7948630)
chr5 (206-247)||(9689553-9689594)
[»] chr4 (26 HSPs)
chr4 (196-251)||(22201896-22201951)
chr4 (201-251)||(25331017-25331067)
chr4 (196-250)||(30009948-30010002)
chr4 (198-248)||(42786650-42786700)
chr4 (197-250)||(41320632-41320685)
chr4 (204-251)||(24131242-24131289)
chr4 (202-251)||(1044697-1044746)
chr4 (204-251)||(7250043-7250090)
chr4 (204-250)||(28541587-28541633)
chr4 (201-251)||(40537415-40537465)
chr4 (202-248)||(41881357-41881403)
chr4 (205-251)||(46635913-46635959)
chr4 (206-251)||(31314998-31315043)
chr4 (208-247)||(44775947-44775986)
chr4 (201-251)||(39479627-39479677)
chr4 (197-250)||(28847140-28847193)
chr4 (213-250)||(32951107-32951144)
chr4 (202-247)||(37915672-37915717)
chr4 (205-248)||(1112784-1112825)
chr4 (204-248)||(49469210-49469254)
chr4 (204-251)||(25445983-25446029)
chr4 (27-86)||(25893708-25893767)
chr4 (197-248)||(25935779-25935830)
chr4 (204-251)||(37046722-37046769)
chr4 (204-250)||(55302732-55302778)
chr4 (202-247)||(19741181-19741226)
[»] chr6 (7 HSPs)
chr6 (197-251)||(2301007-2301061)
chr6 (204-251)||(1391513-1391560)
chr6 (202-251)||(6197747-6197796)
chr6 (202-248)||(29076484-29076530)
chr6 (202-248)||(29111457-29111503)
chr6 (198-251)||(7051728-7051781)
chr6 (199-247)||(34759284-34759332)
[»] chr1 (24 HSPs)
chr1 (198-248)||(6304527-6304577)
chr1 (202-251)||(22183251-22183300)
chr1 (198-251)||(28824642-28824695)
chr1 (199-251)||(953697-953749)
chr1 (202-251)||(19452120-19452169)
chr1 (202-248)||(730030-730076)
chr1 (202-251)||(21222029-21222078)
chr1 (198-251)||(28541381-28541434)
chr1 (202-251)||(45760280-45760329)
chr1 (203-251)||(35279554-35279602)
chr1 (203-251)||(49198537-49198585)
chr1 (206-248)||(47654627-47654669)
chr1 (201-251)||(49417964-49418014)
chr1 (202-251)||(33025393-33025442)
chr1 (202-250)||(50192822-50192870)
chr1 (204-250)||(35679399-35679445)
chr1 (202-251)||(14494093-14494139)
chr1 (204-251)||(47780502-47780549)
chr1 (209-247)||(48524208-48524246)
chr1 (195-247)||(6312447-6312500)
chr1 (198-247)||(9577706-9577755)
chr1 (214-251)||(31572433-31572470)
chr1 (204-249)||(34772311-34772356)
chr1 (199-247)||(45272465-45272513)
[»] chr8 (17 HSPs)
chr8 (202-251)||(24502040-24502089)
chr8 (203-251)||(24214860-24214908)
chr8 (201-251)||(23115437-23115487)
chr8 (202-251)||(42735546-42735595)
chr8 (199-251)||(7507168-7507220)
chr8 (202-251)||(2705088-2705137)
chr8 (202-251)||(26374697-26374746)
chr8 (206-251)||(41478989-41479034)
chr8 (188-248)||(8543393-8543453)
chr8 (204-251)||(42937250-42937297)
chr8 (202-251)||(26373692-26373742)
chr8 (199-248)||(5576893-5576942)
chr8 (195-248)||(29260316-29260369)
chr8 (203-251)||(32711551-32711599)
chr8 (206-248)||(43959549-43959591)
chr8 (199-248)||(1606053-1606102)
chr8 (207-247)||(39190044-39190084)
[»] chr7 (25 HSPs)
chr7 (198-251)||(8078280-8078333)
chr7 (196-251)||(31401579-31401634)
chr7 (201-251)||(44343665-44343715)
chr7 (202-251)||(30440685-30440734)
chr7 (204-251)||(43581359-43581406)
chr7 (201-251)||(34008903-34008953)
chr7 (198-251)||(18915004-18915057)
chr7 (206-251)||(20275532-20275577)
chr7 (201-250)||(34695119-34695168)
chr7 (205-248)||(32143192-32143235)
chr7 (206-251)||(727405-727450)
chr7 (204-248)||(973074-973118)
chr7 (207-251)||(7719530-7719574)
chr7 (200-251)||(9179763-9179814)
chr7 (204-251)||(31638766-31638813)
chr7 (204-251)||(39219604-39219651)
chr7 (201-248)||(40996922-40996969)
chr7 (195-248)||(7113335-7113391)
chr7 (202-248)||(12893297-12893343)
chr7 (204-250)||(47879059-47879105)
chr7 (204-250)||(47914157-47914203)
chr7 (207-248)||(43679363-43679404)
chr7 (201-247)||(7993023-7993069)
chr7 (207-247)||(9882509-9882549)
chr7 (199-247)||(29615037-29615085)
[»] chr2 (21 HSPs)
chr2 (194-251)||(9120049-9120106)
chr2 (200-251)||(31170896-31170947)
chr2 (198-251)||(22552035-22552088)
chr2 (202-251)||(24776244-24776293)
chr2 (201-250)||(26601473-26601522)
chr2 (203-250)||(16269581-16269628)
chr2 (198-248)||(305742-305792)
chr2 (201-251)||(12407268-12407318)
chr2 (205-251)||(14198848-14198894)
chr2 (205-251)||(44765667-44765713)
chr2 (203-247)||(20605042-20605086)
chr2 (202-251)||(1789331-1789380)
chr2 (198-251)||(35316947-35317000)
chr2 (203-250)||(14920619-14920666)
chr2 (202-247)||(378868-378913)
chr2 (203-251)||(43847536-43847584)
chr2 (208-243)||(5093317-5093352)
chr2 (201-251)||(19144912-19144962)
chr2 (197-247)||(28844439-28844489)
chr2 (202-247)||(33135512-33135557)
chr2 (23-67)||(41725924-41725968)
[»] scaffold0113 (1 HSPs)
scaffold0113 (196-251)||(39123-39178)
[»] scaffold0037 (1 HSPs)
scaffold0037 (201-251)||(100098-100148)
[»] scaffold0004 (1 HSPs)
scaffold0004 (204-250)||(102026-102072)
[»] scaffold0651 (1 HSPs)
scaffold0651 (206-251)||(8654-8699)
[»] scaffold0151 (1 HSPs)
scaffold0151 (204-251)||(38790-38837)
[»] scaffold0400 (1 HSPs)
scaffold0400 (202-251)||(15303-15349)
[»] scaffold0365 (1 HSPs)
scaffold0365 (202-251)||(15946-15992)
[»] scaffold0922 (1 HSPs)
scaffold0922 (198-247)||(4083-4133)
[»] scaffold0016 (1 HSPs)
scaffold0016 (202-248)||(81822-81868)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 48712887 - 48713089
Alignment:
Q  1 gtaatcataggtcaagaaagtttttgatttttgtgaattgacaaatacattcatgaaattgtaaaatgtaattcaaaatggtccctccgtcaaaatttga 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48712887 gtaatcataggtcaaaaaagtttctgatttttgtgaattgacaaatacattcatgaaattgtaaaatgtaattcaaaatggtccctccgtcaaaatttga 48712986  T
Q  101 tgttagaaattatgacgtggtgcgttaattgaacatgccacattgtatgttatcctgcgtcaatgtaaactcatcatggactaattagcctacgaaattt 200  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48712987 tgttagaaattatgacgtggtgcgttaattgaacatgccgcattgtatgttatcctgcgtcaatgtaaactcatcatggactaattagcctacgaaattt 48713086  T
Q  201 agg 203  Q
    |||    
T  48713087 agg 48713089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 996405 - 996355
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  996405 agggggtgtattggatcatgattctaagggattttaaaagacttttttatc 996355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 12734159 - 12734110
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  12734159 gggggtgtattggatcatgattctaagggattttaaaagacttttttatc 12734110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 19253710 - 19253763
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  19253710 tttagggggtttattggatcatgattctaagggattttaaaagacttttttatc 19253763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 3206514 - 3206466
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  3206514 ggggtgtattggatcatgattctaagggattttaaaagacttttttatc 3206466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 195 - 251
Target Start/End: Complemental strand, 33808128 - 33808072
Alignment:
Q  195 aaatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||| |||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  33808128 aaatgtagggggtgtattgaatcatgattctaagggattttaaaagacttttttatc 33808072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 16010750 - 16010799
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  16010750 gggggtgtattggatcataattctaagggattttaaaagacttttttatc 16010799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 20498097 - 20498142
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||||||||||||||||||||||||| |||||||||||||||||||    
T  20498097 gggggtgtattggatcatgattctaagggattttaaaagacttttt 20498142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 203 - 248
Target Start/End: Original strand, 22057651 - 22057696
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  22057651 ggggtgtattggatcatgattctaagggattttaaaagactttttt 22057696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 51699802 - 51699749
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| |||| |||||||||||| |||||||||    
T  51699802 tttagggggtgtattggatcatgattataaaagattttaaaagatttttttatc 51699749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 10139468 - 10139416
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  10139468 ttagggggtgtattgaatcatgattctaagggattttaaaatacttttttatc 10139416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 33996809 - 33996761
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  33996809 ggggtgtattggatcatgattctaagggattttgaaagacttttttatc 33996761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 29449180 - 29449131
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||||| |||||||||| ||| ||||||||||||||||||||||    
T  29449180 agggggtgtattagatcatgattataagggattttaaaagacttttttat 29449131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 40246731 - 40246780
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||  |||||||||| |||||||||||    
T  40246731 gggggtgtattggatcatgattctaagagattttaaaaaacttttttatc 40246780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Original strand, 29029898 - 29029942
Alignment:
Q  207 tgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||    
T  29029898 tgtattggatcatgattctaagggattttaaaagacttttatatc 29029942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Original strand, 6589449 - 6589496
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  6589449 aggggatgtattggatcatgattctaagggactttaaaagactttttt 6589496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 37820794 - 37820747
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||| |||||||| |||||||||| |||||||||||||||||||||||    
T  37820794 gggtatattggataatgattctaagggattttaaaagacttttttatc 37820747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 251
Target Start/End: Original strand, 25418248 - 25418302
Alignment:
Q  197 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||| |||||||||||||||||||  |||||||||| | |||||||||    
T  25418248 atttagggggtttattggatcatgattctaagagattttaaaaaatttttttatc 25418302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 35337620 - 35337670
Alignment:
Q  201 agggggtgtattgga-tcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||||| || |||||||||||| ||||||||||||||||||||||    
T  35337620 agggggtgtatttgaatcatgattctaagggattttaaaagacttttttat 35337670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 15494054 - 15494005
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||||||| |||||||||| || ||||||| |||||||||||||||||||    
T  15494054 tttaggggatgtattggattataattctaagggattttaaaagacttttt 15494005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 206 - 250
Target Start/End: Original strand, 27899277 - 27899321
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    ||||||| ||| ||||||||||| |||||||||||||||||||||    
T  27899277 gtgtattagattatgattctaaatgattttaaaagacttttttat 27899321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 48379050 - 48379090
Alignment:
Q  207 tgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||||||||| ||||||||| ||||||||||||||||||||    
T  48379050 tgtattggattatgattctataggattttaaaagacttttt 48379090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 52114418 - 52114466
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||| |||||||||||||||| | ||||||||||| |||||||||    
T  52114418 ggggtgtactggatcatgattctaaggaattttaaaagatttttttatc 52114466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 54625481 - 54625528
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||  ||||||| |||| |||||||||    
T  54625481 gggtgtattggatcatgattctaagagattttagaagatttttttatc 54625528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 19552235 - 19552186
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    ||||||||||||||||   |||| ||||||||||||||||| ||||||||    
T  19552235 agggggtgtattggattgagattttaaaggattttaaaagatttttttat 19552186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 23753705 - 23753660
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||| |||||||||| | ||||||| ||||||||||||||||||||    
T  23753705 ggggatgtattggattaggattctataggattttaaaagacttttt 23753660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 26006072 - 26006023
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  26006072 ttagggggtgtattggattgagatttcaaaggattttaaaagactttttt 26006023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 36674456 - 36674404
Alignment:
Q  196 aatttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||||||| |||||||||| | |||||||  |||||||||||||||||||    
T  36674456 aatttagggggatgtattggattaggattctatgggattttaaaagacttttt 36674404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 39842751 - 39842703
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||| |||||||||| | |||||||  |||||||||||||||||||    
T  39842751 ttaggggatgtattggattaggattctatgggattttaaaagacttttt 39842703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 247
Target Start/End: Complemental strand, 45927034 - 45926990
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||||||||||   |||| |||||||||||||||||||||||    
T  45927034 ggggtgtattggattgagattttaaaggattttaaaagacttttt 45926990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 204 - 248
Target Start/End: Complemental strand, 50900531 - 50900487
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||| | ||||  |||||||||||||||||||||||    
T  50900531 gggtgtattggattaagatttcaaaggattttaaaagactttttt 50900487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 203 - 239
Target Start/End: Original strand, 52079881 - 52079917
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaa 239  Q
    |||||||||||||||||||||||||  ||||||||||    
T  52079881 ggggtgtattggatcatgattctaagtgattttaaaa 52079917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 11)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 191 - 251
Target Start/End: Complemental strand, 7017026 - 7016966
Alignment:
Q  191 tacgaaatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7017026 tacgcaatttagggggtgtattggatcatgattctaagggattttaaaagacttttttatc 7016966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 21146955 - 21147004
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  21146955 gggggtgtattggatcatgattctaagggattttaaaagacttttttatc 21147004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 43319134 - 43319180
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  43319134 gggggtgtattggatcatgattctaagggattttaaaagactttttt 43319180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 27459265 - 27459218
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  27459265 gggtgtattggatcatgattctaacggattttaaaaaacttttttatc 27459218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 16894174 - 16894128
Alignment:
Q  205 ggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||    
T  16894174 ggtgtattggatcataattctaagggattttaaaagacttttttatc 16894128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 5273276 - 5273231
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||    
T  5273276 gtgtattggatcatgattttaagggattttaaaagacttttttatc 5273231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 33656368 - 33656312
Alignment:
Q  196 aatttagg-gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||| |||||||||||||||||||| ||| ||||||||||||| |||||||||    
T  33656368 aatttaggagggtgtattggatcatgattttaagggattttaaaagatttttttatc 33656312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 6460682 - 6460728
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||| ||||||||||||| ||||||||||||| ||||||||    
T  6460682 gggtgtattgaatcatgattctaagggattttaaaagatttttttat 6460728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 32158218 - 32158168
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||| ||||| ||||||||||||| | |||||||||||||||||||||    
T  32158218 agggggtatattgaatcatgattctaaggaattttaaaagacttttttatc 32158168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 207 - 250
Target Start/End: Complemental strand, 7948630 - 7948587
Alignment:
Q  207 tgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||| | ||||||| |||||||||||||||||||||||    
T  7948630 tgtattggattaggattctataggattttaaaagacttttttat 7948587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 206 - 247
Target Start/End: Original strand, 9689553 - 9689594
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||||||| |||||||||| ||||||||| |||||||||    
T  9689553 gtgtattggattatgattctaagggattttaatagacttttt 9689594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 52; Significance: 6e-21; HSPs: 26)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 22201896 - 22201951
Alignment:
Q  196 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22201896 aatttagggggtgtattggatcatgattctaagggattttaaaagacttttttatc 22201951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 25331017 - 25331067
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  25331017 agggggtgtattggatcatgattctaaaagattttaaaagacttttttatc 25331067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 196 - 250
Target Start/End: Complemental strand, 30010002 - 30009948
Alignment:
Q  196 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||    
T  30010002 aatttagggggtgtattggatcatgattctaagggattttaaaagacatttttat 30009948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 198 - 248
Target Start/End: Original strand, 42786650 - 42786700
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  42786650 tttagggggtgtattggatcatgattctaagggattttaaaagactttttt 42786700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 197 - 250
Target Start/End: Original strand, 41320632 - 41320685
Alignment:
Q  197 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  41320632 atttagggggtgtattggatcatgattctaaaagattttaaaagatttttttat 41320685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 24131289 - 24131242
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||    
T  24131289 gggtgtattggatcatgattctaagggattttaaaagacttttttatc 24131242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 1044697 - 1044746
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  1044697 gggggtgtattggatcatgattctaagggattttaaaagatttttttatc 1044746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 7250090 - 7250043
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||| | |||||||||||||||||||||    
T  7250090 gggtgtattggatcatgattctaaggaattttaaaagacttttttatc 7250043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 28541587 - 28541633
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||    
T  28541587 gggtgtattggatcatgattctaagggattttaaaagacatttttat 28541633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 40537465 - 40537415
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||| ||||    
T  40537465 agggggtgtattggatcatgattgtaagggattttaaaagacttttgtatc 40537415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 41881403 - 41881357
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||    
T  41881403 gggggtgtattggatcatgattttaagggattttaaaagactttttt 41881357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 46635959 - 46635913
Alignment:
Q  205 ggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||  ||||||||||||||||||||||    
T  46635959 ggtgtattggatcatgattctaagagattttaaaagacttttttatc 46635913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 31315043 - 31314998
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||    
T  31315043 gtgtattggatcatgattctaagggattttaaaagatttttttatc 31314998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 208 - 247
Target Start/End: Complemental strand, 44775986 - 44775947
Alignment:
Q  208 gtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  44775986 gtattggatcatgattctaatggattttaaaagacttttt 44775947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 39479677 - 39479627
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||| |||   |||||||||||||||||||||    
T  39479677 agggggtgtattggatcatgattttaagaaattttaaaagacttttttatc 39479627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 197 - 250
Target Start/End: Complemental strand, 28847193 - 28847140
Alignment:
Q  197 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    ||||||||| ||||||||||   |||| ||||||||||||||||||||||||||    
T  28847193 atttaggggatgtattggattgagattttaaaggattttaaaagacttttttat 28847140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 213 - 250
Target Start/End: Complemental strand, 32951144 - 32951107
Alignment:
Q  213 ggatcatgattctaaaggattttaaaagacttttttat 250  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  32951144 ggatcatgattctaagggattttaaaagacttttttat 32951107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 37915672 - 37915717
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||    
T  37915672 gggggtgtattggattatgattctatgggattttaaaagacttttt 37915717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 205 - 248
Target Start/End: Original strand, 1112784 - 1112825
Alignment:
Q  205 ggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||||||||  |||||||||||||||||||    
T  1112784 ggtgtattggatcatgattctaa--gattttaaaagactttttt 1112825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 49469210 - 49469254
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||| || | ||||||||||||||||||    
T  49469210 gggtgtattggatcatgattccaaggaattttaaaagactttttt 49469254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 25445983 - 25446029
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||| |||||| ||| |||||||||||||||||||||||    
T  25445983 gggtgtattggat-atgattttaagggattttaaaagacttttttatc 25446029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 27 - 86
Target Start/End: Original strand, 25893708 - 25893767
Alignment:
Q  27 atttttgtgaattgacaaatacattcatgaaattgtaaaatgtaattcaaaatggtccct 86  Q
    |||||||  |||||| |||||||| ||||||||||||||||||  |||||||| ||||||    
T  25893708 atttttgcaaattgataaatacatccatgaaattgtaaaatgttgttcaaaatagtccct 25893767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 197 - 248
Target Start/End: Original strand, 25935779 - 25935830
Alignment:
Q  197 atttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  25935779 atttagggggtgtattggattgagatttcaaaggattttaaaagactttttt 25935830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 37046769 - 37046722
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||| | |||||||||||  ||||||||    
T  37046769 gggtgtattggatcatgattctaaggaattttaaaagatatttttatc 37046722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 55302732 - 55302778
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||| ||||||||| ||| |||||||| |||||||||||||    
T  55302732 gggtgtattgaatcatgattttaagggattttagaagacttttttat 55302778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 19741226 - 19741181
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||| ||||||  |||||||||||||| ||||||||||||||||||    
T  19741226 ggggatgtattcaatcatgattctaaaagattttaaaagacttttt 19741181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 2e-20; HSPs: 7)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 197 - 251
Target Start/End: Complemental strand, 2301061 - 2301007
Alignment:
Q  197 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  2301061 atttagggggtgtattggatcatgattctaagggattttaaaagacttttttatc 2301007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 1391513 - 1391560
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  1391513 gggtgtattggatcatgattctaaaggattttaaatgacttttttatc 1391560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 6197796 - 6197747
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| ||||||||||| |||||||||||    
T  6197796 gggggtgtattggatcatgattctaagggattttaaaaaacttttttatc 6197747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 29076484 - 29076530
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  29076484 gggggtgtattggatcatgattctaagagattttaaaagactttttt 29076530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 29111457 - 29111503
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||    
T  29111457 gggggtgtattggatcatgattctaagagattttaaaagactttttt 29111503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 7051728 - 7051781
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||| || ||| | ||||||||  ||||||||||||||||||||||    
T  7051728 tttagggggtgtgtttgattaggattctaagagattttaaaagacttttttatc 7051781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 34759332 - 34759284
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||||||||||||||||| | |||||||   ||||||||||||||||||    
T  34759332 ttagggggtgtattggattaggattctatgagattttaaaagacttttt 34759284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 2e-20; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 6304577 - 6304527
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6304577 tttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 6304527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 22183251 - 22183300
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22183251 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 22183300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 28824695 - 28824642
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  28824695 tttagggggtgtattggatcatgattctaagggattttaaaagacttttttatc 28824642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 199 - 251
Target Start/End: Original strand, 953697 - 953749
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  953697 ttagggggtgtattggatcatgattctaagggattttaaaagacttttttatc 953749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 19452169 - 19452120
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  19452169 gggggtgtattggatcatgattctaagggattttaaaagacttttttatc 19452120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 730030 - 730076
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||    
T  730030 gggggtgtattggatcatgattctaagggattttaaaagactttttt 730076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 21222029 - 21222078
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  21222029 gggggtgtattggatcatgattctaagggattttaaaaggcttttttatc 21222078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 28541381 - 28541434
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  28541381 tttagggggtgtattggatcatgattctaagcgattttaaaagatttttttatc 28541434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 45760329 - 45760280
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  45760329 gggggtgtattggatcatgattctaagggattttaaaagatttttttatc 45760280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 35279554 - 35279602
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||  ||||||||||||||||||||||    
T  35279554 ggggtgtattggatcatgattctaagagattttaaaagacttttttatc 35279602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 49198585 - 49198537
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||| | |||||||||||||||||||||    
T  49198585 ggggtgtattggatcatgattctaaggaattttaaaagacttttttatc 49198537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 206 - 248
Target Start/End: Complemental strand, 47654669 - 47654627
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  47654669 gtgtattggatcatgattctaagggattttaaaagactttttt 47654627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 49417964 - 49418014
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||| |||||||||||||||||||  ||||||||||||||||||||||    
T  49417964 agggggtatattggatcatgattctaagagattttaaaagacttttttatc 49418014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 33025393 - 33025442
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||  || |||||||||||||||||||    
T  33025393 gggggtgtattggatcatgattctaagagaatttaaaagacttttttatc 33025442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 202 - 250
Target Start/End: Complemental strand, 50192870 - 50192822
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||||| ||||||||||||| | ||||||||||||||||||||    
T  50192870 gggggtgtattgaatcatgattctaaggaattttaaaagacttttttat 50192822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 250
Target Start/End: Complemental strand, 35679445 - 35679399
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||| ||||||||| ||| ||||||||||||||||||||||    
T  35679445 gggtgtattgaatcatgattttaagggattttaaaagacttttttat 35679399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 14494093 - 14494139
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| ||   ||||||||||||||||||    
T  14494093 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatc 14494139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 47780502 - 47780549
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||   ||||||||||| |||||||||    
T  47780502 gggtgtattggatcatgattctaagaaattttaaaagatttttttatc 47780549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 209 - 247
Target Start/End: Original strand, 48524208 - 48524246
Alignment:
Q  209 tattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||||||||||||||| | |||||||||||||||||    
T  48524208 tattggatcatgattctaaggaattttaaaagacttttt 48524246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 247
Target Start/End: Original strand, 6312447 - 6312500
Alignment:
Q  195 aaatttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||||||||||| |||||||||| | |||||||  |||||||||||||||||||    
T  6312447 aaatttagggggatgtattggattaggattctatgggattttaaaagacttttt 6312500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 9577755 - 9577706
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||||||| |||||||||| | ||||| || |||||||||||||||||||    
T  9577755 tttaggggatgtattggattaggattcgaagggattttaaaagacttttt 9577706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 214 - 251
Target Start/End: Complemental strand, 31572470 - 31572433
Alignment:
Q  214 gatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||| ||||||||| |||||||||||||    
T  31572470 gatcatgattctaagggattttaagagacttttttatc 31572433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 204 - 249
Target Start/End: Original strand, 34772311 - 34772356
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagactttttta 249  Q
    |||||||||||||  |||||  ||||||||||||||||||||||||    
T  34772311 gggtgtattggattgtgatttcaaaggattttaaaagactttttta 34772356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Original strand, 45272465 - 45272513
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||| |||||||||| | |||||||  |||||||||||||||||||    
T  45272465 ttaggggatgtattggattaagattctatgggattttaaaagacttttt 45272513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 50; Significance: 1e-19; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 24502089 - 24502040
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24502089 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 24502040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 24214908 - 24214860
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  24214908 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 24214860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 23115487 - 23115437
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  23115487 agggggtgtattggatcatgattctaagggattttaaaagacttttttatc 23115437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 42735595 - 42735546
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  42735595 gggggtgtattggatcatgattctaagggattttaaaagacttttttatc 42735546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 199 - 251
Target Start/End: Complemental strand, 7507220 - 7507168
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  7507220 ttagagggtgtattggatcatgattctaagggattttaaaagacttttttatc 7507168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 2705137 - 2705088
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||| ||||||||||||||||| |||||||||    
T  2705137 gggggtgtattggatcatgattgtaaaggattttaaaagatttttttatc 2705088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 26374746 - 26374697
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||| ||||||||||||||||||||| |||||||||||||||||||||||    
T  26374746 ggggatgtattggatcatgattctaagggattttaaaagacttttttatc 26374697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 41478989 - 41479034
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  41478989 gtgtattggatcatgattctaagggattttaaaagacttttttatc 41479034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 188 - 248
Target Start/End: Original strand, 8543393 - 8543453
Alignment:
Q  188 gcctacgaaatttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||| || |||||||||||| |||||||||||||| ||||||||||||| ||||||    
T  8543393 gcctacgaacttaagggggtgtattagatcatgattctaagggattttaaaagattttttt 8543453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 42937250 - 42937297
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||| ||| |||||||||||||||||||||||    
T  42937250 gggtgtattggatcatgattttaagggattttaaaagacttttttatc 42937297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 26373692 - 26373742
Alignment:
Q  202 gggggtgtattgg-atcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  26373692 gggggtgtattgggatcatgattctaagggattttaaaagacttttttatc 26373742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 5576942 - 5576893
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||| |||||||||| ||||||||||||| ||||||    
T  5576942 ttagggggtgtattggattatgattctaagggattttaaaagattttttt 5576893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 195 - 248
Target Start/End: Complemental strand, 29260369 - 29260316
Alignment:
Q  195 aaatttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||||   |||| ||||||||||||||||||||||||    
T  29260369 aaatttagggggtgtattggattgagattttaaaggattttaaaagactttttt 29260316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 251
Target Start/End: Complemental strand, 32711599 - 32711551
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||  || |||||||||||||||||||    
T  32711599 ggggtgtattggatcatgattctaagagactttaaaagacttttttatc 32711551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 206 - 248
Target Start/End: Original strand, 43959549 - 43959591
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||| |||||||||| ||||||||||||||||||||||||    
T  43959549 gtgtatttgatcatgattttaaaggattttaaaagactttttt 43959591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 199 - 248
Target Start/End: Complemental strand, 1606102 - 1606053
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||   ||||  |||||||||||||||||||||||    
T  1606102 ttagggggtgtattggattgagatttcaaaggattttaaaagactttttt 1606053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 39190084 - 39190044
Alignment:
Q  207 tgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||||||||| | |||||||| |||||||||||||||||||    
T  39190084 tgtattggattaggattctaagggattttaaaagacttttt 39190044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 8078280 - 8078333
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  8078280 tttagggggtgtattggatcatgattctaagggattttaaaagacttttttatc 8078333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 251
Target Start/End: Original strand, 31401579 - 31401634
Alignment:
Q  196 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  31401579 aatttagggggtgtattggatcatgattctaaagaactttaaaagacttttttatc 31401634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 201 - 251
Target Start/End: Complemental strand, 44343715 - 44343665
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  44343715 agggggtgtattggatcatgattctaagggattttaaaagacttttttatc 44343665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 30440685 - 30440734
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  30440685 gggggtgtattggatcatgattctaagggattttaaaagacttttttatc 30440734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 43581406 - 43581359
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||    
T  43581406 gggtgtattggatcatgattctaaagaattttaaaagacttttttatc 43581359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 34008903 - 34008953
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||| ||||||||||||| |||||||||    
T  34008903 agggggtgtattggatcatgattctaagggattttaaaagatttttttatc 34008953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 18915057 - 18915004
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||  ||||| |||||||||||||||||||||||    
T  18915057 tttagggggtgtattggatcatgtatctaagggattttaaaagacttttttatc 18915004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 206 - 251
Target Start/End: Complemental strand, 20275577 - 20275532
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||| |||||||||||||||||||||||    
T  20275577 gtgtattggatcatgattctaagggattttaaaagacttttttatc 20275532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 201 - 250
Target Start/End: Original strand, 34695119 - 34695168
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    ||||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  34695119 agggggtgtattgaatcatgattctaagggattttaaaagacttttttat 34695168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 205 - 248
Target Start/End: Complemental strand, 32143235 - 32143192
Alignment:
Q  205 ggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||||| ||||||||||||||||||||    
T  32143235 ggtgtattggatcatgattctaagggattttaaaagactttttt 32143192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 727405 - 727450
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||    
T  727405 gtgtattggatcatgattctaatggattttaaatgacttttttatc 727450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 204 - 248
Target Start/End: Original strand, 973074 - 973118
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||||||||| ||||||||||||| ||||||    
T  973074 gggtgtattggatcatgattctaagggattttaaaagattttttt 973118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 251
Target Start/End: Complemental strand, 7719574 - 7719530
Alignment:
Q  207 tgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||| |||| ||||||||||||||||||||||    
T  7719574 tgtattggatcatgattgtaaaagattttaaaagacttttttatc 7719530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 200 - 251
Target Start/End: Original strand, 9179763 - 9179814
Alignment:
Q  200 tagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||| |  |||||||| ||||||||||||||||||||||    
T  9179763 tagggggtgtattggattagcattctaaaagattttaaaagacttttttatc 9179814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 251
Target Start/End: Original strand, 31638766 - 31638813
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||| |||||||||||||  ||||||||||||||||||||||    
T  31638766 gggtgtattgaatcatgattctaagagattttaaaagacttttttatc 31638813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 39219651 - 39219604
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||| ||||||| | |||||||||||||||||||||    
T  39219651 gggtgtattggatcataattctaaggaattttaaaagacttttttatc 39219604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 201 - 248
Target Start/End: Complemental strand, 40996969 - 40996922
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||||||||| ||||||||||| | ||||||    
T  40996969 agggggtgtattggatcatgattctaagggattttaaaatattttttt 40996922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 195 - 248
Target Start/End: Original strand, 7113335 - 7113391
Alignment:
Q  195 aaatttagggggtgtattggatca---tgattctaaaggattttaaaagactttttt 248  Q
    ||||| ||||||||||||||||||   ||||||||| ||||||||||||||||||||    
T  7113335 aaattaagggggtgtattggatcatcatgattctaagggattttaaaagactttttt 7113391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 202 - 248
Target Start/End: Original strand, 12893297 - 12893343
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||||||||||||| | ||||||||||| ||||||    
T  12893297 gggggtgtattggatcatgattctaaggtattttaaaagattttttt 12893343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 47879059 - 47879105
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||    
T  47879059 gggtgtattgaatcatgattctaagggattttaaaagacttatttat 47879105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 47914157 - 47914203
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||    
T  47914157 gggtgtattgaatcatgattctaagggattttaaaagacttatttat 47914203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 207 - 248
Target Start/End: Original strand, 43679363 - 43679404
Alignment:
Q  207 tgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||| ||||||||||||| ||||||    
T  43679363 tgtattggatcatgattctaagggattttaaaagattttttt 43679404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 247
Target Start/End: Original strand, 7993023 - 7993069
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||| |||||||||| | ||||||| ||||||||||||||||||||    
T  7993023 aggggatgtattggattaagattctataggattttaaaagacttttt 7993069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 9882549 - 9882509
Alignment:
Q  207 tgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||||||||| | ||||||| ||||||||||||||||||||    
T  9882549 tgtattggattaggattctataggattttaaaagacttttt 9882509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 199 - 247
Target Start/End: Complemental strand, 29615085 - 29615037
Alignment:
Q  199 ttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||| |||||||||| |||||||||   ||||||||||||||||||    
T  29615085 ttaggggatgtattggattatgattctatgagattttaaaagacttttt 29615037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 50; Significance: 1e-19; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 194 - 251
Target Start/End: Original strand, 9120049 - 9120106
Alignment:
Q  194 gaaatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9120049 gaaattaagggggtgtattggatcatgattctaagggattttaaaagacttttttatc 9120106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 200 - 251
Target Start/End: Complemental strand, 31170947 - 31170896
Alignment:
Q  200 tagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  31170947 tagggggtgtattggatcatgattctaagggattttaaaagacttttttatc 31170896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 198 - 251
Target Start/End: Complemental strand, 22552088 - 22552035
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  22552088 tttagtgggtgtattggatcatgattctaagggattttaaaagacttttttatc 22552035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 24776244 - 24776293
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  24776244 gggggtgtattggatcatgattctaagggattttaaaagacttttttatc 24776293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 201 - 250
Target Start/End: Complemental strand, 26601522 - 26601473
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26601522 agggggtgtattggatcatgtttctaaaggattttaaaagacttttttat 26601473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 203 - 250
Target Start/End: Original strand, 16269581 - 16269628
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16269581 ggggtgtattggatcatgattctaagggattttaaaagacttttttat 16269628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 198 - 248
Target Start/End: Complemental strand, 305792 - 305742
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||||||    
T  305792 tttagggggtgtattggatcatgattctaagcgattttaaaagactttttt 305742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 12407268 - 12407318
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  12407268 agggggtgtattggatcatgattctaagagattttaaaagacttttttatc 12407318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 205 - 251
Target Start/End: Complemental strand, 14198894 - 14198848
Alignment:
Q  205 ggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  14198894 ggtgtattggatcatgattctaagggattttaaaagacttttttatc 14198848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 205 - 251
Target Start/End: Original strand, 44765667 - 44765713
Alignment:
Q  205 ggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||    
T  44765667 ggtgtattggatcatgattctaagggattttaaaagacttttttatc 44765713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 20605042 - 20605086
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||||||||||||||||||||| |||||||||||||||||||    
T  20605042 ggggtgtattggatcatgattctaagggattttaaaagacttttt 20605086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 202 - 251
Target Start/End: Original strand, 1789331 - 1789380
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||  |||||||||||| |||||||||    
T  1789331 gggggtgtattggatcatgattctaagagattttaaaagatttttttatc 1789380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 198 - 251
Target Start/End: Original strand, 35316947 - 35317000
Alignment:
Q  198 tttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||| ||||||||||| ||||||||||||| ||||||||||| |||||||||||    
T  35316947 tttaaggggtgtattgaatcatgattctaagggattttaaaaaacttttttatc 35317000  T

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Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 203 - 250
Target Start/End: Complemental strand, 14920666 - 14920619
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    ||||||||||||||  ||||| ||||||||||||||||||||||||||    
T  14920666 ggggtgtattggattgtgattttaaaggattttaaaagacttttttat 14920619  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 378868 - 378913
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||| ||||||||||||||||| ||| |||||||||||||||||||    
T  378868 ggggatgtattggatcatgattataagggattttaaaagacttttt 378913  T

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Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 203 - 251
Target Start/End: Original strand, 43847536 - 43847584
Alignment:
Q  203 ggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||| |||||||  ||||| |||||||||||||||||||||||    
T  43847536 ggggtgtattagatcatgtatctaagggattttaaaagacttttttatc 43847584  T

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Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 208 - 243
Target Start/End: Complemental strand, 5093352 - 5093317
Alignment:
Q  208 gtattggatcatgattctaaaggattttaaaagact 243  Q
    |||||||||||||||||||| |||||||||||||||    
T  5093352 gtattggatcatgattctaagggattttaaaagact 5093317  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 19144912 - 19144962
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||  |||||||||| ||||||||||| | |||||||||    
T  19144912 agggggtgtattggaatatgattctaagggattttaaaatatttttttatc 19144962  T

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Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 28844439 - 28844489
Alignment:
Q  197 atttagggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||||| |||||||||| | |||||||  |||||||||||||||||||    
T  28844439 atttaggggatgtattggattaggattctatgggattttaaaagacttttt 28844489  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 33135512 - 33135557
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    |||| |||||||||| | ||||||| ||||||||||||||||||||    
T  33135512 ggggatgtattggattaggattctataggattttaaaagacttttt 33135557  T

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Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 23 - 67
Target Start/End: Complemental strand, 41725968 - 41725924
Alignment:
Q  23 tttgatttttgtgaattgacaaatacattcatgaaattgtaaaat 67  Q
    |||||||||||||||||||||| || |||  ||||||||||||||    
T  41725968 tttgatttttgtgaattgacaagtatatttgtgaaattgtaaaat 41725924  T

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Target: scaffold0113 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 251
Target Start/End: Complemental strand, 39178 - 39123
Alignment:
Q  196 aatttagggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  39178 aattaagggggtgtattggatcatgattctaatggattttaaaagacttttttatc 39123  T

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Target: scaffold0037 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 201 - 251
Target Start/End: Original strand, 100098 - 100148
Alignment:
Q  201 agggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  100098 agggggtgtattggatcatgattctaagggattttaaaagacttttttatc 100148  T

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Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 102026 - 102072
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttat 250  Q
    ||||||||| |||||||||||||| ||||||||||||||||||||||    
T  102026 gggtgtattagatcatgattctaagggattttaaaagacttttttat 102072  T

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Target: scaffold0651 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0651
Description:

Target: scaffold0651; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 206 - 251
Target Start/End: Original strand, 8654 - 8699
Alignment:
Q  206 gtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||| ||||||||||||| |||||||||    
T  8654 gtgtattggatcatgattctaagggattttaaaagatttttttatc 8699  T

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Target: scaffold0151 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0151
Description:

Target: scaffold0151; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 251
Target Start/End: Complemental strand, 38837 - 38790
Alignment:
Q  204 gggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||| |||||||||||||  ||||||||    
T  38837 gggtgtattggatcatgattctaagggattttaaaagatatttttatc 38790  T

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Target: scaffold0400 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0400
Description:

Target: scaffold0400; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 15349 - 15303
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| ||   ||||||||||||||||||    
T  15349 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatc 15303  T

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Target: scaffold0365 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0365
Description:

Target: scaffold0365; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 202 - 251
Target Start/End: Complemental strand, 15992 - 15946
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagacttttttatc 251  Q
    |||||||||||||||||||||||||| ||   ||||||||||||||||||    
T  15992 gggggtgtattggatcatgattctaaggg---ttaaaagacttttttatc 15946  T

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Target: scaffold0922 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0922
Description:

Target: scaffold0922; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 4083 - 4133
Alignment:
Q  198 tttaggggg-tgtattggatcatgattctaaaggattttaaaagacttttt 247  Q
    ||||||||| |||||||||| | ||||||| ||||||||||||||||||||    
T  4083 tttagggggatgtattggattaggattctataggattttaaaagacttttt 4133  T

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Target: scaffold0016 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 202 - 248
Target Start/End: Complemental strand, 81868 - 81822
Alignment:
Q  202 gggggtgtattggatcatgattctaaaggattttaaaagactttttt 248  Q
    |||||||||||||||   |||| ||||||||||||||||||||||||    
T  81868 gggggtgtattggattgagattttaaaggattttaaaagactttttt 81822  T

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