View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7721_high_2 (Length: 680)

Name: NF7721_high_2
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7721_high_2
NF7721_high_2
[»] chr1 (15 HSPs)
chr1 (12-603)||(42471035-42471632)
chr1 (589-662)||(42471644-42471717)
chr1 (251-360)||(30210177-30210285)
chr1 (254-360)||(4075670-4075777)
chr1 (252-346)||(6768956-6769049)
chr1 (272-360)||(17746599-17746687)
chr1 (282-360)||(26795461-26795544)
chr1 (271-358)||(37346134-37346221)
chr1 (313-376)||(44108879-44108943)
chr1 (269-360)||(5715031-5715122)
chr1 (271-358)||(17702955-17703042)
chr1 (278-340)||(32712100-32712162)
chr1 (251-340)||(5786327-5786416)
chr1 (253-290)||(47666577-47666614)
chr1 (294-351)||(50004254-50004310)
[»] chr3 (7 HSPs)
chr3 (271-405)||(40417596-40417728)
chr3 (271-358)||(40700802-40700889)
chr3 (272-325)||(21748185-21748238)
chr3 (277-350)||(48935746-48935819)
chr3 (251-378)||(45817956-45818083)
chr3 (305-376)||(20525556-20525628)
chr3 (278-358)||(28457566-28457646)
[»] chr5 (17 HSPs)
chr5 (259-405)||(26449046-26449191)
chr5 (269-360)||(32528991-32529082)
chr5 (271-360)||(13416334-13416422)
chr5 (285-350)||(42458788-42458853)
chr5 (251-378)||(3522452-3522572)
chr5 (271-358)||(33007773-33007860)
chr5 (272-358)||(31078167-31078253)
chr5 (274-356)||(39466626-39466708)
chr5 (252-377)||(9198025-9198153)
chr5 (271-358)||(29861166-29861253)
chr5 (293-360)||(39351566-39351633)
chr5 (282-356)||(25346839-25346913)
chr5 (252-339)||(7010096-7010182)
chr5 (283-346)||(16290378-16290441)
chr5 (276-325)||(7883572-7883621)
chr5 (271-340)||(33134403-33134471)
chr5 (282-358)||(21091050-21091126)
[»] chr2 (12 HSPs)
chr2 (260-377)||(29463224-29463342)
chr2 (255-340)||(40627037-40627122)
chr2 (251-346)||(6458281-6458375)
chr2 (271-377)||(12027330-12027436)
chr2 (252-352)||(1529380-1529471)
chr2 (265-477)||(3044453-3044667)
chr2 (269-360)||(6279141-6279232)
chr2 (278-378)||(19427146-19427247)
chr2 (269-358)||(41595539-41595628)
chr2 (252-378)||(13527017-13527145)
chr2 (282-358)||(13995526-13995602)
chr2 (277-326)||(5256826-5256874)
[»] chr4 (12 HSPs)
chr4 (271-379)||(50876872-50876981)
chr4 (274-358)||(37910443-37910527)
chr4 (234-346)||(2183991-2184102)
chr4 (260-360)||(26619935-26620035)
chr4 (251-346)||(45413067-45413161)
chr4 (276-340)||(45498955-45499019)
chr4 (265-360)||(14135141-14135235)
chr4 (298-360)||(22205335-22205397)
chr4 (283-358)||(36198604-36198679)
chr4 (284-358)||(44289416-44289490)
chr4 (271-340)||(35075167-35075235)
chr4 (303-378)||(14518561-14518637)
[»] chr8 (12 HSPs)
chr8 (255-377)||(39284570-39284693)
chr8 (254-378)||(32897612-32897737)
chr8 (271-351)||(40953535-40953615)
chr8 (271-346)||(15259188-15259263)
chr8 (271-358)||(16295635-16295722)
chr8 (271-358)||(16303337-16303424)
chr8 (271-358)||(43597131-43597218)
chr8 (271-325)||(11656124-11656178)
chr8 (278-324)||(27696563-27696609)
chr8 (276-358)||(42180609-42180690)
chr8 (251-340)||(23586415-23586504)
chr8 (282-358)||(3174216-3174292)
[»] chr6 (10 HSPs)
chr6 (271-357)||(32329639-32329725)
chr6 (271-358)||(9315106-9315193)
chr6 (271-358)||(391061-391148)
chr6 (271-358)||(12255411-12255498)
chr6 (276-325)||(29969609-29969658)
chr6 (391-506)||(128782-128898)
chr6 (252-303)||(17991061-17991112)
chr6 (271-358)||(23404785-23404872)
chr6 (298-360)||(31799401-31799463)
chr6 (271-327)||(12771332-12771387)
[»] chr7 (7 HSPs)
chr7 (277-378)||(37970448-37970550)
chr7 (251-360)||(29127431-29127539)
chr7 (254-375)||(41481787-41481907)
chr7 (272-351)||(44108478-44108556)
chr7 (271-378)||(28109241-28109349)
chr7 (283-340)||(34866231-34866288)
chr7 (277-378)||(23318319-23318420)
[»] scaffold1822 (1 HSPs)
scaffold1822 (251-339)||(529-616)
[»] scaffold0474 (1 HSPs)
scaffold0474 (260-332)||(11309-11381)


Alignment Details
Target: chr1 (Bit Score: 446; Significance: 0; HSPs: 15)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 446; E-Value: 0
Query Start/End: Original strand, 12 - 603
Target Start/End: Original strand, 42471035 - 42471632
Alignment:
Q  12 cagagaacaaaatagcgtgattagatatagaatacattatgctaaaacagaactgtgcaaagacgtgccattggtaggaaaatatatacgaatcgttcaa 111  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  42471035 cagagaacaaaatagcgtgattagatatagaatacattatgctaaaacagaactgtgcaaagacgtgccattggtagggaaatatatacgaatcgttcaa 42471134  T
Q  112 ttatttccctctctagttggattattgactttagaaaatttaagtgaaatttgtgtggcagcggcctcgtacgttgagggtgaaattcggtggtggaaag 211  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  42471135 ttatttccctctctagttggattattgactttagagaatttaagtgaaatttgtgcggcagcggcctcgtacgttgagggtgaaattcggtggtggaaag 42471234  T
Q  212 annnnnnnngttaagtaccttaagaggccgtttggtgcgcatgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatc 311  Q
    |        || |||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  42471235 attttttttgtcaagtac-ttaaggggccgtttgatgcgcatgataggattagaaaatagataaagatatgatatgataatgatatgatagacatttatc 42471333  T
Q  312 atatcatgtgtttggtacacacatgataaaaaatatgatagcattatt-----tatcatatcatgtgtttggcgcatag-ttttattattgacatgataa 405  Q
    |||||||||||||||| |||||||||||| ||||||||||||||||||     |||||||||||||||||||||||||| |||||||||||| ||||| |    
T  42471334 atatcatgtgtttggtgcacacatgataagaaatatgatagcattatttatcatatcatatcatgtgtttggcgcatagtttttattattgatatgatga 42471433  T
Q  406 aaataacaacactccataactttaattttacacacgtaattaattatattggtaacaagattgggaagaaaatgatggaattgatattgactgtaatttt 505  Q
    ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42471434 aaataacaacactccataactttaattttacacacgtaattaaatctattggtaacaagattgggaagaaaatgatggaattgatattgactgtaatttt 42471533  T
Q  506 acgaag-nnnnnnnttataaagaaattcgtaatttagaaagattgggaacagaattatgaagaaaattgtaaagaattatggagaaaacaaattgtgca 603  Q
    | ||||        |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42471534 atgaagaaaaaaaattatgaagaaaatcgtaatttagaaagattgggaacagaattatgaagaaaattgtaaagaattatggagaaaacaaattgtgca 42471632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 589 - 662
Target Start/End: Original strand, 42471644 - 42471717
Alignment:
Q  589 aaaacaaattgtgcaaaaatgattggaggaacattgaaaagtaaatcgattgcagaaaatcaattagacaaaat 662  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42471644 aaaacaaattgtgcaaaaatgattggaggaacattgaaaagtaaatcgattgcagaaaatcaattagacaaaat 42471717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 30210285 - 30210177
Alignment:
Q  251 catgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgat 350  Q
    ||||||||||| |  | || ||||||||||||||||||||||||||||||| ||||||||| |||||  |||||| |||||||||||||| ||| |||||    
T  30210285 catgataggataaagagatggataaagatatgatatgataatgacatgata-acatttatcctatcacttgtttgatacacacatgataagaaacatgat 30210187  T
Q  351 agcattattt 360  Q
    |  |||||||    
T  30210186 aatattattt 30210177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 254 - 360
Target Start/End: Original strand, 4075670 - 4075777
Alignment:
Q  254 gataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataa-aaaatatgatag 352  Q
    |||||||| |||| || || || |||| ||||||||| ||||| |||||||| ||||| ||||||||||||||| |||||||| ||| ||||||  ||||    
T  4075670 gataggataagaagatggacaaggataggatatgatagtgacaagatagacacttatcctatcatgtgtttggttcacacatggtaagaaaatacaatag 4075769  T
Q  353 cattattt 360  Q
    ||||||||    
T  4075770 cattattt 4075777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 252 - 346
Target Start/End: Complemental strand, 6769049 - 6768956
Alignment:
Q  252 atgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaata 346  Q
    |||||||||| |||| || |||||||||||||||||||| |||| ||||| || |||||| |||||  |||||||| ||||||||||||| ||||    
T  6769049 atgataggataagaagatggataaagatatgatatgatagtgacttgata-acgtttatcctatcacatgtttggtgcacacatgataaacaata 6768956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 272 - 360
Target Start/End: Complemental strand, 17746687 - 17746599
Alignment:
Q  272 ataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt 360  Q
    |||||||| |||||||||||||  | || |||||||||||||||||| |||||| |  ||||||||||| |||||| |||| |||||||    
T  17746687 ataaagatgtgatatgataatggtaggagagacatttatcatatcatatgtttgttgaacacatgataacaaatattatagtattattt 17746599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 282 - 360
Target Start/End: Complemental strand, 26795544 - 26795461
Alignment:
Q  282 gatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatg-----ataaaaaatatgatagcattattt 360  Q
    ||||||||| |||||||||||||  ||||| ||||||||||||||| ||||||||     |||||||| |||||||||||||||    
T  26795544 gatatgatactgacatgatagacgcttatcctatcatgtgtttggtgcacacatgataagataaaaaaaatgatagcattattt 26795461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 37346134 - 37346221
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| ||||| |||||||||| ||||||||| ||||| ||| ||||||||||||| | | |||||||||| ||| |||||| ||||||    
T  37346134 gatagagataggatatgataaggacatgataaacattaatcctatcatgtgtttgatgcgcacatgataacaaacatgatatcattat 37346221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 313 - 376
Target Start/End: Complemental strand, 44108943 - 44108879
Alignment:
Q  313 tatcatgtgtttggtacacacatgataaaaaatatgatagcatta-tttatcatatcatgtgttt 376  Q
    ||||||||||||||  |||||||||||| ||| |||||||||||| |||||||||| ||||||||    
T  44108943 tatcatgtgtttggggcacacatgataataaacatgatagcattattttatcatattatgtgttt 44108879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 269 - 360
Target Start/End: Original strand, 5715031 - 5715122
Alignment:
Q  269 tagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt 360  Q
    |||||||||||  || |||||| ||  | |||||| |||||||||||||| |||||||| ||| |||||||| |||||| |||  |||||||    
T  5715031 tagataaagatgagacatgatagtggtaagatagatatttatcatatcatatgtttggtgcacgcatgataataaatattataatattattt 5715122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 17703042 - 17702955
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| ||||| |||||||||| |||||||||  |||| ||| |||||||| |||| | |||||||||||| ||| | |||| ||||||    
T  17703042 gatagagataagatatgataaagacatgataagcattaatcctatcatgtttttgatgcacacatgataacaaacaggatatcattat 17702955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 340
Target Start/End: Original strand, 32712100 - 32712162
Alignment:
Q  278 atatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataa 340  Q
    ||||||||||||| | |||||||||| | ||||  ||||||| ||||||| ||||||||||||    
T  32712100 atatgatatgatagtaacatgatagatacttatgctatcatgcgtttggtgcacacatgataa 32712162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 5786416 - 5786327
Alignment:
Q  251 catgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataa 340  Q
    ||||||||||||||||  | ||||| ||||  ||| |||||  |||||||| ||| |||||||||| |  |||||||| |||||||||||    
T  5786416 catgataggattagaagctggataaggatagaataggataacaacatgataaacacttatcatatcttacgtttggtatacacatgataa 5786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 253 - 290
Target Start/End: Original strand, 47666577 - 47666614
Alignment:
Q  253 tgataggattagaaaatagataaagatatgatatgata 290  Q
    |||| ||||||||||||||||||||||| |||||||||    
T  47666577 tgatgggattagaaaatagataaagataggatatgata 47666614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 294 - 351
Target Start/End: Original strand, 50004254 - 50004310
Alignment:
Q  294 acatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgata 351  Q
    |||||||| ||||||||| |||||| |||||||| |||||||||||| ||| ||||||    
T  50004254 acatgata-acatttatcctatcatatgtttggtgcacacatgataacaaacatgata 50004310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 3e-28; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 271 - 405
Target Start/End: Complemental strand, 40417728 - 40417596
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta-tttatcatatca 369  Q
    ||||| |||| ||||||| | |||||||||| |||||||||||||||| |||||||| ||| |||||||| |||||||||||||||| ||||||||||||    
T  40417728 gataaggataggatatgacagtgacatgata-acatttatcatatcatatgtttggtgcacgcatgataagaaatatgatagcattattttatcatatca 40417630  T
Q  370 tgtgtttggcgcatagttttattattgacatgataa 405  Q
    |||||||| | ||||  ||| |||||||||||||||    
T  40417629 tgtgtttgacacata--tttgttattgacatgataa 40417596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 40700802 - 40700889
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| ||||| |||||||||| ||||||||| ||||| ||| ||||||||||||| | |||||||||||| ||| |||||| ||||||    
T  40700802 gatagagataggatatgataaggacatgataaacattaatcctatcatgtgtttgatgcacacatgataacaaacatgatatcattat 40700889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 272 - 325
Target Start/End: Original strand, 21748185 - 21748238
Alignment:
Q  272 ataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttg 325  Q
    ||||||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  21748185 ataaagataggatatgataaggacatgataaacattaatcatatcatgtgtttg 21748238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 277 - 350
Target Start/End: Original strand, 48935746 - 48935819
Alignment:
Q  277 gatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgat 350  Q
    |||| |||| |||| |||||||||||||| ||||| |||||||||||||||  ||||||||||| ||| |||||    
T  48935746 gataggataggatagtgacatgatagacacttatcctatcatgtgtttggtgtacacatgataagaaagatgat 48935819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 251 - 378
Target Start/End: Original strand, 45817956 - 45818083
Alignment:
Q  251 catgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgat 350  Q
    ||||||| ||||||||  | ||||| ||||| |||  ||||| |||||||||||| |||||||||| |  |||||||| ||||||||||| ||| | |||    
T  45817956 catgatatgattagaagttggataaggatattataaaataataacatgatagacacttatcatatcttacgtttggtatacacatgataagaaaga-gat 45818054  T
Q  351 agcatta-tttatcatatcatgtgtttgg 378  Q
    | ||||| |||||| |||||| |||||||    
T  45818055 aacattattttatcctatcatatgtttgg 45818083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 305 - 376
Target Start/End: Complemental strand, 20525628 - 20525556
Alignment:
Q  305 atttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta-tttatcatatcatgtgttt 376  Q
    ||||||||||||||||||||||| || | ||||||| ||| ||||||  |||| ||||||||||||| |||||    
T  20525628 atttatcatatcatgtgtttggtgcagatatgataagaaagatgatattattattttatcatatcatatgttt 20525556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 278 - 358
Target Start/End: Original strand, 28457566 - 28457646
Alignment:
Q  278 atatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    ||||||||||| |||||||||||| ||||  ||| |||||| |||||| | | |||||||||| ||||| |||| ||||||    
T  28457566 atatgatatgacaatgacatgataaacatcaatcctatcatatgtttgatgcgcacatgataacaaataagatatcattat 28457646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 8e-26; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 259 - 405
Target Start/End: Complemental strand, 26449191 - 26449046
Alignment:
Q  259 gattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta- 357  Q
    ||||||||||| |||||| ||||||||||||| |||||||||||||| ||||| |||||||  |||||| |||| ||||||| ||| |||||| |||||     
T  26449191 gattagaaaatggataaaaatatgatatgatagtgacatgatagacacttatcctatcatgcttttggtgcacatatgataagaaagatgatatcattat 26449092  T
Q  358 tttatcatatcatgtgtttggcgcatagttttattattgacatgataa 405  Q
    |||||| |||||||||||||  ||| |  ||| |||||||||||||||    
T  26449091 tttatcctatcatgtgtttgttgcaca--tttgttattgacatgataa 26449046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 269 - 360
Target Start/End: Original strand, 32528991 - 32529082
Alignment:
Q  269 tagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt 360  Q
    |||||||||||| ||||||||| ||| |||||||||| ||||  ||||||||||||||| || | ||||||| ||||||||||| |||||||    
T  32528991 tagataaagataggatatgatactgatatgatagacacttattctatcatgtgtttggtgcatagatgataacaaatatgatagtattattt 32529082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 271 - 360
Target Start/End: Original strand, 13416334 - 13416422
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt 360  Q
    ||||| |||||||||||||| |||||||||| ||||| ||| ||| ||||||||||| |||| ||||||| ||| |||||||||||||||    
T  13416334 gataaggatatgatatgatagtgacatgataaacatt-atcctattatgtgtttggtgcacatatgataagaaagatgatagcattattt 13416422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 285 - 350
Target Start/End: Original strand, 42458788 - 42458853
Alignment:
Q  285 atgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgat 350  Q
    |||||| | ||||||||||||| |||||| ||||||||||||| |||||||||||| |||||||||    
T  42458788 atgatattaacatgatagacatgtatcatgtcatgtgtttggtgcacacatgataagaaatatgat 42458853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 251 - 378
Target Start/End: Original strand, 3522452 - 3522572
Alignment:
Q  251 catgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgat 350  Q
    |||||||  |||||||||||||||||||||| |||||||| | |||||||| ||||||||| ||        ||||| ||| |||||||||||| |||||    
T  3522452 catgatataattagaaaatagataaagatataatatgatagtaacatgataaacatttatccta--------ttggtgcacgcatgataaaaaagatgat 3522543  T
Q  351 agcatta-tttatcatatcatgtgtttgg 378  Q
    | ||||| |||||| |||| |||||||||    
T  3522544 aacattattttatcctatcgtgtgtttgg 3522572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 33007773 - 33007860
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| ||||| ||||||||||||||||||||   ||| ||||||||||||||||| | |||||||||||| ||| | |||| ||||||    
T  33007773 gatagagataagatatgataatgacatgataagtattaatcatatcatgtgtttgatgcacacatgataacaaacaagatatcattat 33007860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 272 - 358
Target Start/End: Complemental strand, 31078253 - 31078167
Alignment:
Q  272 ataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||||||||| ||||||||| ||||||||| ||||| ||  ||||||||||||| | | |||||||||| ||| |||||| ||||||    
T  31078253 ataaagatataatatgataaagacatgataaacattaattctatcatgtgtttgatgcgcacatgataacaaacatgatatcattat 31078167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 274 - 356
Target Start/End: Complemental strand, 39466708 - 39466626
Alignment:
Q  274 aaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatt 356  Q
    ||||||||||||||||| | ||| |||| |||||||||||||||  |||||||  |||| |||||| |||| |||||||||||    
T  39466708 aaagatatgatatgatagtaacaggatatacatttatcatatcacatgtttggggcacatatgatataaaagatgatagcatt 39466626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 252 - 377
Target Start/End: Complemental strand, 9198153 - 9198025
Alignment:
Q  252 atgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtt--tggtacacacatgataaaaaatatga 349  Q
    |||||| ||||| |||||  ||||||||| |||||||||  || | |||||||| ||||||| ||||  |||  |||| |||||||||||||||| ||||    
T  9198153 atgataagattaaaaaatgaataaagataggatatgatagggataagatagacacttatcatgtcatacgttcttggtgcacacatgataaaaaagatga 9198054  T
Q  350 tagcatta-tttatcatatcatgtgtttg 377  Q
    ||  |||| |||||||||| |||||||||    
T  9198053 taatattattttatcatattatgtgtttg 9198025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 29861253 - 29861166
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| ||||| |||||||||||||||||||| ||||| ||| ||||||||||||| |   |||||||||| ||| | |||| ||||||    
T  29861253 gatagagataagatatgataatgacatgataaacattaatcttatcatgtgtttgatgtgcacatgataacaaacacgatatcattat 29861166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 293 - 360
Target Start/End: Complemental strand, 39351633 - 39351566
Alignment:
Q  293 gacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt 360  Q
    |||||||||  |||| ||||||||||||||||| | | |||||||||| |||||||||| ||||||||    
T  39351633 gacatgatatgcattaatcatatcatgtgtttgatgcgcacatgataacaaatatgatatcattattt 39351566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 282 - 356
Target Start/End: Original strand, 25346839 - 25346913
Alignment:
Q  282 gatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatt 356  Q
    |||||||||| ||||||||| ||||| ||| ||||||||||||| | | |||||||||| ||||| |||| ||||    
T  25346839 gatatgataaagacatgataaacattaatcctatcatgtgtttgatgcgcacatgataacaaataggatatcatt 25346913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 339
Target Start/End: Original strand, 7010096 - 7010182
Alignment:
Q  252 atgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgata 339  Q
    |||||||||| |  |||| ||||| ||||  |||||||| |||||||||| ||||||||| |||||  |||||||| |||||||||||    
T  7010096 atgataggataaagaaatggataaggatagaatatgatagtgacatgata-acatttatcctatcacctgtttggtgcacacatgata 7010182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 346
Target Start/End: Original strand, 16290378 - 16290441
Alignment:
Q  283 atatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaata 346  Q
    |||||||| |||||||||||||| ||||| ||||||||||| | |  ||| |||||||||||||    
T  16290378 atatgatagtgacatgatagacaattatcctatcatgtgttcgatgtacaaatgataaaaaata 16290441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 7883572 - 7883621
Alignment:
Q  276 agatatgatatgataatgacatgatagacatttatcatatcatgtgtttg 325  Q
    ||||| |||||||||| |||||| || ||||| |||||||||||||||||    
T  7883572 agataggatatgataaggacatgttaaacattaatcatatcatgtgtttg 7883621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 33134471 - 33134403
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataa 340  Q
    |||| ||||| |||||||||| ||||||||| ||||| ||| ||||||||||||| | | ||||||||||    
T  33134471 gatagagataagatatgataaagacatgata-acattaatcctatcatgtgtttgatgcgcacatgataa 33134403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 21091050 - 21091126
Alignment:
Q  282 gatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||||||||| ||||||||| || || ||| ||||||||||||| | | |||||||||| ||| | |||| ||||||    
T  21091050 gatatgataaggacatgataaaccttaatcctatcatgtgtttgatgcgcacatgataacaaacaagatatcattat 21091126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 3e-22; HSPs: 12)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 260 - 377
Target Start/End: Complemental strand, 29463342 - 29463224
Alignment:
Q  260 attagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta-t 358  Q
    |||||||||||||| |||||| ||||||||| |||||||||| |||||||||  | ||| ||||||||  ||| ||||||| ||| |||||||||||| |    
T  29463342 attagaaaatagatgaagataagatatgatagtgacatgataaacatttatccgaacatatgtttggtgtacatatgataagaaagatgatagcattatt 29463243  T
Q  359 ttatcatatcatgtgtttg 377  Q
    |||||||||||| ||||||    
T  29463242 ttatcatatcatatgtttg 29463224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 255 - 340
Target Start/End: Complemental strand, 40627122 - 40627037
Alignment:
Q  255 ataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataa 340  Q
    ||||||||||||  | ||||| ||||| |||||||| | ||| |||||||| ||||||| ||||||||||||||||||||||||||    
T  40627122 ataggattagaagttggataaggatataatatgatagtaacaagatagacacttatcatttcatgtgtttggtacacacatgataa 40627037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 346
Target Start/End: Complemental strand, 6458375 - 6458281
Alignment:
Q  251 catgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaata 346  Q
    ||||||||||| |||| || ||||| ||||||||||||||||||| | ||| ||||||||| |||||  |||||||| ||||||||||||| ||||    
T  6458375 catgataggataagaagatggataaggatatgatatgataatgactttata-acatttatcctatcacatgtttggtgcacacatgataaataata 6458281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 271 - 377
Target Start/End: Complemental strand, 12027436 - 12027330
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta-tttatcatatca 369  Q
    ||||| |||||||||||||| ||| || ||| ||||||||||| |||||||||| |  |||||||||||||||| | |||| ||||| |||||| |||||    
T  12027436 gataaggatatgatatgatagtgatataata-acatttatcatgtcatgtgttttgggcacacatgataaaaaagaggatatcattattttatcctatca 12027338  T
Q  370 tgtgtttg 377  Q
     |||||||    
T  12027337 cgtgtttg 12027330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 252 - 352
Target Start/End: Original strand, 1529380 - 1529471
Alignment:
Q  252 atgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgata 351  Q
    |||||| ||||||||||| |||||||||||||||||||| |         |||| |||||  |||||||||||||| |||||||||||| ||||||||||    
T  1529380 atgataagattagaaaatggataaagatatgatatgatagt---------gacaattatcccatcatgtgtttggtgcacacatgataagaaatatgata 1529470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 265 - 477
Target Start/End: Original strand, 3044453 - 3044667
Alignment:
Q  265 aaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta-tttatc 363  Q
    |||| ||||||||||| | ||||||| | | |||||| | | ||||| |||||| ||||||||||| ||||||||| ||| | |||||||||| |||||     
T  3044453 aaaaaagataaagataggctatgatagtaatatgataaagacttatcctatcatatgtttggtacatacatgataagaaaaaagatagcattattttatt 3044552  T
Q  364 atatca----tgtgtttggcgcatagttttattattgaca-tgataaaaataacaacactccataactttaattttacacacgtaattaattatattggt 458  Q
     |||||    | ||||||| ||| | |    ||||||||| ||||||||  |||||| || |||||||| |||||||||||| ||||||| |  ||||      
T  3044553 ctatcatttgtttgtttggtgcacact----ttattgacattgataaaataaacaacgctgcataacttaaattttacacacataattaaatcaattgtg 3044648  T
Q  459 aacaagattgggaagaaaa 477  Q
    ||||||||||| |||||||    
T  3044649 aacaagattggaaagaaaa 3044667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 269 - 360
Target Start/End: Complemental strand, 6279232 - 6279141
Alignment:
Q  269 tagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt 360  Q
    |||||||  ||||||||||| ||| | |||||| || ||||||||||||||||||||||   ||||||||||||| || ||| |||| ||||    
T  6279232 tagataagtatatgatatgacaataatatgataaacttttatcatatcatgtgtttggtgaccacatgataaaaattaggattgcatcattt 6279141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 278 - 378
Target Start/End: Complemental strand, 19427247 - 19427146
Alignment:
Q  278 atatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat-ttatcatatcatgtgttt 376  Q
    ||||||||| ||| ||| | ||||||||| |||| | ||||  ||||||| || | ||||||| ||||||||||||||||| |||||||||  |||||||    
T  19427247 atatgatatcatagtgataagatagacatctatcgtgtcatacgtttggtgcatatatgataataaatatgatagcattatgttatcatattttgtgttt 19427148  T
Q  377 gg 378  Q
    ||    
T  19427147 gg 19427146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 269 - 358
Target Start/End: Complemental strand, 41595628 - 41595539
Alignment:
Q  269 tagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||||| ||||| |||||||||||||||||||| ||||| ||| ||| ||||||||| |   ||||| |||| ||| |||||| ||||||    
T  41595628 tagatatagataagatatgataatgacatgataaacattaatcctattatgtgtttgatgtgcacataataacaaacatgatatcattat 41595539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 378
Target Start/End: Original strand, 13527017 - 13527145
Alignment:
Q  252 atgataggattagaaaa-tagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgat 350  Q
    |||||| |||||||||| | ||||||||||  ||||||||||| || |||| | |||||||   |||||  |||| | ||||||| |||| |||||||||    
T  13527017 atgatatgattagaaaaattgataaagatagaatatgataatggcaggataaatatttatcccctcatgcatttgatgcacacataataagaaatatgat 13527116  T
Q  351 agcatta-tttatcatatcatgtgtttgg 378  Q
    | ||||| |||||| |||||| |||||||    
T  13527117 aacattattttatcctatcatatgtttgg 13527145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 282 - 358
Target Start/End: Original strand, 13995526 - 13995602
Alignment:
Q  282 gatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    ||||||| || ||||||||| ||||| ||| ||||||||||||| | | |||||||||| ||| |||||| ||||||    
T  13995526 gatatgacaaggacatgataaacattaatcctatcatgtgtttgatgcgcacatgataagaaacatgatatcattat 13995602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 277 - 326
Target Start/End: Complemental strand, 5256874 - 5256826
Alignment:
Q  277 gatatgatatgataatgacatgatagacatttatcatatcatgtgtttgg 326  Q
    |||||||||||||| |||||||||||||| ||||| |||| |||||||||    
T  5256874 gatatgatatgatagtgacatgatagaca-ttatcctatcgtgtgtttgg 5256826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 54; Significance: 1e-21; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 271 - 379
Target Start/End: Complemental strand, 50876981 - 50876872
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat-ttatcatatca 369  Q
    ||||| ||||||||| ||||||||||||||| |||  |||||||||||| |||||||  |||||||||||||||||||||| || ||| ||||| |||||    
T  50876981 gataaggatatgatacgataatgacatgatatacacctatcatatcatgcgtttggtggacacatgataaaaaatatgataacaatatattatcttatca 50876882  T
Q  370 tgtgtttggc 379  Q
    | ||||||||    
T  50876881 tatgtttggc 50876872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 274 - 358
Target Start/End: Original strand, 37910443 - 37910527
Alignment:
Q  274 aaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    ||||||| |||||||||||||||||||| ||||| ||||||||||||||||| | |||||||||||| ||| | |||| ||||||    
T  37910443 aaagataggatatgataatgacatgataaacattaatcatatcatgtgtttgatgcacacatgataacaaacaggatatcattat 37910527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 234 - 346
Target Start/End: Complemental strand, 2184102 - 2183991
Alignment:
Q  234 agaggccgtttggtgcgcatgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacac 333  Q
    |||| ||||| | ||| ||||||||||| |||| || ||||| ||||||||||||||||||| | ||| ||||||||| |||||  |||||||| |||||    
T  2184102 agagcccgttcgatgcacatgataggataagaagatggataaggatatgatatgataatgaccttata-acatttatcttatcacatgtttggtgcacac 2184004  T
Q  334 atgataaaaaata 346  Q
    |||||||| ||||    
T  2184003 atgataaataata 2183991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 260 - 360
Target Start/End: Original strand, 26619935 - 26620035
Alignment:
Q  260 attagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattatt 359  Q
    ||||||||||  ||||  ||| ||||||||||| |||||||||||||||||| | |||||  |||| | ||  |||||||||||||||||||||||||||    
T  26619935 attagaaaatgaataagaataggatatgataataacatgatagacatttatcctttcatgcatttgatgcatgcatgataaaaaatatgatagcattatt 26620034  T
Q  360 t 360  Q
    |    
T  26620035 t 26620035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 251 - 346
Target Start/End: Original strand, 45413067 - 45413161
Alignment:
Q  251 catgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaata 346  Q
    ||||||||||| |||| || ||||||||||| |||||||| |||| ||||| ||||||||| |||||| |||||| | ||||||||||||| ||||    
T  45413067 catgataggataagaagatggataaagatataatatgatagtgacctgata-acatttatcttatcatatgtttgatgcacacatgataaataata 45413161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 276 - 340
Target Start/End: Original strand, 45498955 - 45499019
Alignment:
Q  276 agatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataa 340  Q
    ||||| |||||||||| ||||||||| ||||| ||||||||||||||||| | ||||||||||||    
T  45498955 agataggatatgataaggacatgataaacattaatcatatcatgtgtttgatgcacacatgataa 45499019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 265 - 360
Target Start/End: Original strand, 14135141 - 14135235
Alignment:
Q  265 aaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt 360  Q
    ||||| |||| ||| |||||||||||  ||||||||| |||||||||||||||||| ||||   | |||||||||| ||||| |||| ||||||||    
T  14135141 aaaatggatagagacatgatatgatatagacatgata-acatttatcatatcatgtatttgacgcgcacatgataataaataagataacattattt 14135235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 298 - 360
Target Start/End: Complemental strand, 22205397 - 22205335
Alignment:
Q  298 gatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt 360  Q
    |||| ||||||||| ||||||| ||||||| || || |||||||||| |||||||||||||||    
T  22205397 gataaacatttatcctatcatgcgtttggtgcatacttgataaaaaagatgatagcattattt 22205335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 283 - 358
Target Start/End: Original strand, 36198604 - 36198679
Alignment:
Q  283 atatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||||||||  |||||||| ||||| ||| ||||||||||||| |   |||||||||| |||||||||| ||||||    
T  36198604 atatgataagtacatgataaacattaatcttatcatgtgtttgatgtgcacatgataacaaatatgatatcattat 36198679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 284 - 358
Target Start/End: Original strand, 44289416 - 44289490
Alignment:
Q  284 tatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||||||| ||||||||| ||||| ||| | ||||||||||| | | |||||||||| ||| |||||| ||||||    
T  44289416 tatgataaggacatgataaacattaatcttctcatgtgtttgatgcgcacatgataacaaacatgatatcattat 44289490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 271 - 340
Target Start/End: Complemental strand, 35075235 - 35075167
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataa 340  Q
    ||||| |||| ||||||||| |||||| ||| ||||||||| ||| |  |||||||||||||||||||||    
T  35075235 gataatgataggatatgatagtgacataata-acatttatcctattacatgtttggtacacacatgataa 35075167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 303 - 378
Target Start/End: Complemental strand, 14518637 - 14518561
Alignment:
Q  303 acatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta-tttatcatatcatgtgtttgg 378  Q
    |||| |||||||||||||||||| | | |||| ||||| ||| ||||||  |||| ||||||||||||| |||||||    
T  14518637 acatgtatcatatcatgtgtttgatgcgcacaagataagaaagatgataatattattttatcatatcatatgtttgg 14518561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 52; Significance: 2e-20; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 255 - 377
Target Start/End: Complemental strand, 39284693 - 39284570
Alignment:
Q  255 ataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagca 354  Q
    ||||||||||||| | |||||||||| |||| || | | ||||||||||||| |||||||||||||||||||  || ||||||||||||  | |||| ||    
T  39284693 ataggattagaaattggataaagataggataagaaagtaacatgatagacatctatcatatcatgtgtttggggcaaacatgataaaaatgaggatatca 39284594  T
Q  355 tta-tttatcatatcatgtgtttg 377  Q
    ||| ||||||||||||| ||||||    
T  39284593 ttattttatcatatcatatgtttg 39284570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 254 - 378
Target Start/End: Complemental strand, 32897737 - 32897612
Alignment:
Q  254 gataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagc 353  Q
    |||| ||||||||||| ||| ||||||||||| |||| |||||||||||||||||||| ||||||  ||||||| || | ||||||| ||| | |||| |    
T  32897737 gatatgattagaaaatggatcaagatatgataggatagtgacatgatagacatttatcctatcatacgtttggtgcagatatgataagaaagaggataac 32897638  T
Q  354 a-ttatttatcatatcatgtgtttgg 378  Q
    | || |||||| |||||| |||||||    
T  32897637 atttttttatcctatcatatgtttgg 32897612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 271 - 351
Target Start/End: Complemental strand, 40953615 - 40953535
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgata 351  Q
    |||| ||||| |||||||||| ||||||||| ||||| ||||||||||||||||| | | |||||||||| ||| ||||||    
T  40953615 gatagagataggatatgataacgacatgataaacattaatcatatcatgtgtttgatgcgcacatgataacaaacatgata 40953535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 346
Target Start/End: Complemental strand, 15259263 - 15259188
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaata 346  Q
    |||||| | |||||||||||  || |||||| ||||||||||||||||||||||  ||||  ||||||||||||||    
T  15259263 gataaaaacatgatatgatatagatatgataaacatttatcatatcatgtgtttaatacatgcatgataaaaaata 15259188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 16295722 - 16295635
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| |||||||||||||||| ||||||||| ||||| ||| ||||||||||||| |   |||||||||| ||| | |||| ||||||    
T  16295722 gatagagatatgatatgataaggacatgataaacattaatcttatcatgtgtttgatgtgcacatgataacaaacaggatatcattat 16295635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 16303424 - 16303337
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| |||||||||||||||| ||||||||| ||||| ||| ||||||||||||| |   |||||||||| ||| | |||| ||||||    
T  16303424 gatagagatatgatatgataaggacatgataaacattaatcttatcatgtgtttgatgtgcacatgataacaaacaggatatcattat 16303337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 43597218 - 43597131
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| |||||||||||||||| ||||||||| ||||| ||| |||||| |||||| |   |||||||||| |||||| ||| ||||||    
T  43597218 gatagagatatgatatgataaggacatgataaacattaatcctatcatatgtttgatgggcacatgataacaaatataatatcattat 43597131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 271 - 325
Target Start/End: Original strand, 11656124 - 11656178
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttg 325  Q
    |||| ||||| |||||||||| ||||||||| ||||| |||||||||||||||||    
T  11656124 gatagagataggatatgataaggacatgataaacattaatcatatcatgtgtttg 11656178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 278 - 324
Target Start/End: Complemental strand, 27696609 - 27696563
Alignment:
Q  278 atatgatatgataatgacatgatagacatttatcatatcatgtgttt 324  Q
    |||||||||||||| ||||||||| ||||| ||| ||||||||||||    
T  27696609 atatgatatgataaggacatgataaacattaatcctatcatgtgttt 27696563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 276 - 358
Target Start/End: Complemental strand, 42180690 - 42180609
Alignment:
Q  276 agatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||||||||||||||| ||||||||| ||||| ||| ||||||  ||||| | | |||||||||| ||| |||||| ||||||    
T  42180690 agatatgatatgataaggacatgata-acattaatcctatcatacgtttgatgcgcacatgataacaaacatgatatcattat 42180609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 251 - 340
Target Start/End: Complemental strand, 23586504 - 23586415
Alignment:
Q  251 catgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataa 340  Q
    ||||||||||||| ||  | ||||| |||| |||| |||||  |||||||| ||| |||||||||| |  |||||||| |||||||||||    
T  23586504 catgataggattataagttggataatgataggataggataacaacatgataaacagttatcatatcttacgtttggtatacacatgataa 23586415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 282 - 358
Target Start/End: Complemental strand, 3174292 - 3174216
Alignment:
Q  282 gatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||||||||| ||||||||| ||||| ||| ||||||||||||| | |  ||||||||| ||| || ||| ||||||    
T  3174292 gatatgataaggacatgataaacattaatcctatcatgtgtttgatgcgtacatgataacaaacataatatcattat 3174216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 7e-20; HSPs: 10)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 271 - 357
Target Start/End: Complemental strand, 32329725 - 32329639
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta 357  Q
    |||| ||||| |||||||||| ||||||||| ||||| ||||||||||||||||| ||| |||||||||| |||||||||| |||||    
T  32329725 gatagagataagatatgataaggacatgataaacattaatcatatcatgtgtttgatacgcacatgataacaaatatgatatcatta 32329639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 9315193 - 9315106
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| |||||||||||||||| ||||||||| ||||| ||| ||||||||||||| | | |||||||||| ||| | |||| ||||||    
T  9315193 gatagagatatgatatgataaggacatgataaacattaatcctatcatgtgtttgatgcgcacatgataacaaacaagatatcattat 9315106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 358
Target Start/End: Original strand, 391061 - 391148
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| ||||| |||||||||| ||||||||| ||||| ||| ||||||||||||| |   |||||||||| ||||| |||| ||||||    
T  391061 gatagagataagatatgataaagacatgataaacattaatcttatcatgtgtttgatgtgcacatgataacaaataggatatcattat 391148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 12255498 - 12255411
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||| ||||| ||||| |||| ||||||||| ||||| ||| ||||||||||||| | | |||||||||| ||| |||||| ||||||    
T  12255498 gatagagataggatattataaagacatgataaacattaatcttatcatgtgtttgatgcgcacatgataacaaacatgatatcattat 12255411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 29969609 - 29969658
Alignment:
Q  276 agatatgatatgataatgacatgatagacatttatcatatcatgtgtttg 325  Q
    |||||||||||||||| ||||||||| ||||| ||| |||||||||||||    
T  29969609 agatatgatatgataaggacatgataaacattaatcctatcatgtgtttg 29969658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 391 - 506
Target Start/End: Original strand, 128782 - 128898
Alignment:
Q  391 ttattgacatgataaaaataacaacactccataactttaattttacacacgtaattaattatattggtaacaagattgggaagaaaa-tgatggaattga 489  Q
    |||||||||||||||||  |||||   |  |||||||||||||||||| | ||||||| || ||||  ||||||||||| |||||||  | |||||||||    
T  128782 ttattgacatgataaaataaacaaagatgtataactttaattttacacccataattaaataaattgcgaacaagattggaaagaaaacagttggaattga 128881  T
Q  490 tattgactgtaatttta 506  Q
    ||| || ||| ||||||    
T  128882 tatcgattgttatttta 128898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 252 - 303
Target Start/End: Original strand, 17991061 - 17991112
Alignment:
Q  252 atgataggattagaaaatagataaagatatgatatgataatgacatgataga 303  Q
    |||||||||||||||  | ||||||||||| |||||||| ||||||||||||    
T  17991061 atgataggattagaagttggataaagatataatatgatagtgacatgataga 17991112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 271 - 358
Target Start/End: Complemental strand, 23404872 - 23404785
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattat 358  Q
    |||||||||| |||||||||| ||||||||| ||||| ||  ||||||||||||| |   |||||||||| ||| | |||| ||||||    
T  23404872 gataaagataagatatgataaggacatgataaacattaatattatcatgtgtttgatgtgcacatgataacaaacacgatatcattat 23404785  T

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Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 298 - 360
Target Start/End: Original strand, 31799401 - 31799463
Alignment:
Q  298 gatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt 360  Q
    |||||||| |||||||||||| |||||  | |||| ||||||| ||||||||||| |||||||    
T  31799401 gatagacacttatcatatcatatgttttatgcacatatgataagaaatatgatagtattattt 31799463  T

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Target: chr6; HSP #10
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 271 - 327
Target Start/End: Original strand, 12771332 - 12771387
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggt 327  Q
    ||||| |||| ||||||||||| |||||||||| | ||||| |||||||||||||||    
T  12771332 gataaggataggatatgataataacatgataga-acttatcctatcatgtgtttggt 12771387  T

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Target: chr7 (Bit Score: 47; Significance: 2e-17; HSPs: 7)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 277 - 378
Target Start/End: Complemental strand, 37970550 - 37970448
Alignment:
Q  277 gatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta-tttatcatatcatgtgtt 375  Q
    |||| ||||||||| ||||| |||| ||||||||| |||||||  |||||| ||||| |||||||||| |||||||||||| |||||| ||||||| |||    
T  37970550 gataagatatgatagtgacaggataaacatttatcctatcatgcatttggtgcacacttgataaaaaagatgatagcattattttatcctatcatgcgtt 37970451  T
Q  376 tgg 378  Q
    |||    
T  37970450 tgg 37970448  T

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Target: chr7; HSP #2
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 251 - 360
Target Start/End: Complemental strand, 29127539 - 29127431
Alignment:
Q  251 catgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgat 350  Q
    ||||||||||| ||||| | ||||| |||||||||||||| ||| | |||| ||||||||| | ||||| ||||||| ||||| |||| ||||| |||||    
T  29127539 catgataggataagaaactggataaggatatgatatgatagtgataggataaacatttatcttgtcatgcgtttggtgcacacttgat-aaaaagatgat 29127441  T
Q  351 agcattattt 360  Q
    ||||||||||    
T  29127440 agcattattt 29127431  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 254 - 375
Target Start/End: Original strand, 41481787 - 41481907
Alignment:
Q  254 gataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagc 353  Q
    |||| |||||||||||  ||||||||| |||| | || |||||||||||||| ||||| | ||||| |||||||  ||||||||||||||| |||||| |    
T  41481787 gatatgattagaaaatgtataaagataggatagg-tagtgacatgatagacacttatcctgtcatgcgtttggt--acacatgataaaaaagatgataac 41481883  T
Q  354 att--atttatcatatcatgtgtt 375  Q
    |||   ||||||||||||||||||    
T  41481884 atttattttatcatatcatgtgtt 41481907  T

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Target: chr7; HSP #4
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 272 - 351
Target Start/End: Complemental strand, 44108556 - 44108478
Alignment:
Q  272 ataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgata 351  Q
    ||||||||| ||||||||| ||||| |||| ||||||||| ||||||||| ||||||| |||||||||| ||| ||||||    
T  44108556 ataaagataggatatgatagtgacaagatatacatttatcctatcatgtg-ttggtactcacatgataagaaagatgata 44108478  T

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Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 271 - 378
Target Start/End: Complemental strand, 28109349 - 28109241
Alignment:
Q  271 gataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcatta-tttatcatatca 369  Q
    |||||||||| ||||||||| | || | ||| ||||||||||||| |||| ||||||  | ||||||||| |||| |||||| |||| |||||||||||     
T  28109349 gataaagataagatatgatagtaacgtaataaacatttatcatattatgtatttggtgtatacatgataagaaatgtgatagaattattttatcatatcg 28109250  T
Q  370 tgtgtttgg 378  Q
    | |||||||    
T  28109249 tatgtttgg 28109241  T

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Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 283 - 340
Target Start/End: Original strand, 34866231 - 34866288
Alignment:
Q  283 atatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataa 340  Q
    ||||||||||||||||||| ||||| ||| ||||||||||||| | | ||||||||||    
T  34866231 atatgataatgacatgataaacattaatcttatcatgtgtttgatgcgcacatgataa 34866288  T

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Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 277 - 378
Target Start/End: Original strand, 23318319 - 23318420
Alignment:
Q  277 gatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgataaaaaatatgatagcattattt-atcatatcatgtgtt 375  Q
    |||| ||||||||| | ||  |||| ||||||||||||||   ||||||||  ||||||||| |||||||||||||||| |||| ||| |||||| ||||    
T  23318319 gataggatatgatagtaactggataaacatttatcatatcccatgtttggttaacacatgat-aaaaatatgatagcatgatttaatcgtatcatatgtt 23318417  T
Q  376 tgg 378  Q
    |||    
T  23318418 tgg 23318420  T

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Target: scaffold1822 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold1822
Description:

Target: scaffold1822; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 251 - 339
Target Start/End: Original strand, 529 - 616
Alignment:
Q  251 catgataggattagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacacacatgata 339  Q
    ||||||||||| | ||||| ||||| |||| |||||| || |||||||||| |||| |||| ||||||||||||||| |||||||||||    
T  529 catgataggataaaaaaatggataaggataggatatggtagtgacatgata-acatctatcctatcatgtgtttggtgcacacatgata 616  T

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Target: scaffold0474 (Bit Score: 41; Significance: 0.00000000000007; HSPs: 1)
Name: scaffold0474
Description:

Target: scaffold0474; HSP #1
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 260 - 332
Target Start/End: Complemental strand, 11381 - 11309
Alignment:
Q  260 attagaaaatagataaagatatgatatgataatgacatgatagacatttatcatatcatgtgtttggtacaca 332  Q
    |||||||||| |||||||||||  ||||||| |||||||||| ||||||||| | ||||||||||||| ||||    
T  11381 attagaaaattgataaagatatagtatgatagtgacatgataaacatttatcttgtcatgtgtttggtgcaca 11309  T

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