View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7721_high_96 (Length: 226)
Name: NF7721_high_96
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7721_high_96 |
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Alignment Details
Target: chr7 (Bit Score: 196; Significance: 1e-107; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 46333310 - 46333528
Alignment:
| Q |
1 |
tccaccgggactacgcgggcggatggagaaacggtaattggctgacaccttgcttgttatattgaaatgtttgatgttctgtccgcacttggacacgtgc |
100 |
Q |
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| T |
46333310 |
tccaccgggactacgcgggcggatggagaaacggtaattggctgacaccttgcttgttatattgaaatgtttgatgttctgtccacacttggacacgtgc |
46333409 |
T |
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| Q |
101 |
tttgtatggttcaactcatgcatttattgtttttgactttaggtggcgatggaatcagaaggttttgccatttatgatgcaatgatgcagatgaaaacaa |
200 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| || |
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| T |
46333410 |
tttgtatggttcaactcatgcatttattgtttttgactttaggtggcgatggagtcagaaggttttgccatttatgatgcaatgatgcagatgaa---aa |
46333506 |
T |
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| Q |
201 |
ctcaggtttgtttcttctcact |
222 |
Q |
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|| ||||||||||||||||||| |
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| T |
46333507 |
ctgaggtttgtttcttctcact |
46333528 |
T |
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