View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7721_high_99 (Length: 218)
Name: NF7721_high_99
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7721_high_99 |
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Alignment Details
Target: chr5 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 128
Target Start/End: Original strand, 4261644 - 4261745
Alignment:
| Q |
24 |
tgacttttaatctcttttcctcctcacatctagttatcgttgaccaagcctaaagtagaaaccttaaacaagatttgttatataccagatgaaaatacct |
123 |
Q |
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|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
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| T |
4261644 |
tgacttttaatctcttttcctcctcacatctagttagcgttgaccaagcctaaagtagaaaccttaaacaagatttg---tataccagatgaaaatacct |
4261740 |
T |
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| Q |
124 |
gagtg |
128 |
Q |
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||||| |
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| T |
4261741 |
gagtg |
4261745 |
T |
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