View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7721_low_100 (Length: 255)
Name: NF7721_low_100
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7721_low_100 |
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Alignment Details
Target: chr4 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 12 - 240
Target Start/End: Original strand, 34640336 - 34640564
Alignment:
| Q |
12 |
aattctatgagacaaagaaggttgagacatcatatataaaatcaataatttaacatgaaagcataaatatattcttaatcaagattaataaacccatcag |
111 |
Q |
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| T |
34640336 |
aattctatgagacaaagatagttgagacatcatatataaaatcaataatttaacatgaaagcataaatatattcttaatcaagattaataaacccatcag |
34640435 |
T |
|
| Q |
112 |
tatattatttatttcataagctagttttgttggtgttaaattaaaatttgaagctgggtcatagtgggtgtttgagaacagtgacatgcatggttttaag |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
34640436 |
tatattatttatttcataagctagttttgttggtgttaaattaaaatttgaagctgggtcatagtgggtgtttgagaacagtgacatgcatggttttaag |
34640535 |
T |
|
| Q |
212 |
ttgcatatgcattgccatccttaatattg |
240 |
Q |
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|||||||||||||||||||||||||||| |
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| T |
34640536 |
atgcatatgcattgccatccttaatattg |
34640564 |
T |
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