View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7721_low_121 (Length: 233)

Name: NF7721_low_121
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7721_low_121
NF7721_low_121
[»] chr8 (69 HSPs)
chr8 (1-220)||(7677006-7677228)
chr8 (1-147)||(23230787-23230933)
chr8 (1-147)||(7883040-7883186)
chr8 (1-146)||(16928557-16928702)
chr8 (4-147)||(17693412-17693556)
chr8 (4-147)||(31013407-31013550)
chr8 (1-147)||(9637208-9637354)
chr8 (1-146)||(25190865-25191010)
chr8 (1-143)||(30568124-30568266)
chr8 (4-147)||(33214470-33214613)
chr8 (5-147)||(45445610-45445752)
chr8 (1-147)||(37971427-37971577)
chr8 (5-147)||(40211099-40211243)
chr8 (5-147)||(28086611-28086753)
chr8 (8-95)||(15344459-15344546)
chr8 (8-95)||(15433524-15433611)
chr8 (8-95)||(15524828-15524915)
chr8 (5-84)||(18890561-18890640)
chr8 (76-146)||(41684592-41684662)
chr8 (5-101)||(29617119-29617215)
chr8 (8-143)||(1236501-1236635)
chr8 (9-100)||(41896669-41896760)
chr8 (111-153)||(13570429-13570471)
chr8 (5-103)||(14916031-14916129)
chr8 (5-139)||(24186468-24186602)
chr8 (103-153)||(24842736-24842786)
chr8 (1-142)||(29939444-29939586)
chr8 (5-147)||(40618872-40619014)
chr8 (5-95)||(43833847-43833937)
chr8 (74-147)||(8412321-8412394)
chr8 (111-164)||(37613061-37613114)
chr8 (111-155)||(38545476-38545520)
chr8 (5-103)||(8867953-8868054)
chr8 (4-63)||(10377836-10377895)
chr8 (1-52)||(20553135-20553186)
chr8 (6-52)||(5046902-5046948)
chr8 (5-95)||(7198046-7198136)
chr8 (9-95)||(14585829-14585915)
chr8 (111-153)||(39067352-39067394)
chr8 (5-95)||(41060114-41060204)
chr8 (110-164)||(41362157-41362211)
chr8 (115-152)||(11967996-11968033)
chr8 (5-142)||(27498170-27498307)
chr8 (5-49)||(5333577-5333621)
chr8 (115-155)||(13575869-13575909)
chr8 (5-48)||(428989-429032)
chr8 (5-81)||(471029-471107)
chr8 (1-52)||(20559638-20559689)
chr8 (1-52)||(20571200-20571251)
chr8 (28-147)||(21237959-21238077)
chr8 (5-147)||(27110259-27110406)
chr8 (115-153)||(2234132-2234170)
chr8 (115-153)||(2968944-2968982)
chr8 (115-157)||(4757577-4757619)
chr8 (111-153)||(7281977-7282019)
chr8 (115-153)||(15286694-15286732)
chr8 (115-153)||(15467063-15467101)
chr8 (115-153)||(24790832-24790870)
chr8 (115-153)||(31202877-31202915)
chr8 (115-152)||(1809901-1809938)
chr8 (114-147)||(10377931-10377964)
chr8 (112-153)||(30026544-30026585)
chr8 (6-95)||(33347372-33347461)
chr8 (5-86)||(34493150-34493231)
chr8 (5-49)||(6394250-6394294)
chr8 (110-154)||(9799678-9799722)
chr8 (5-49)||(10254351-10254395)
chr8 (5-49)||(20227175-20227219)
chr8 (111-151)||(26673446-26673486)
[»] chr7 (62 HSPs)
chr7 (4-147)||(40993304-40993447)
chr7 (5-147)||(9977011-9977153)
chr7 (1-147)||(8001347-8001493)
chr7 (1-153)||(37837253-37837405)
chr7 (1-153)||(45349594-45349746)
chr7 (1-147)||(28044557-28044703)
chr7 (1-147)||(48061566-48061712)
chr7 (1-141)||(39171397-39171537)
chr7 (1-147)||(48316620-48316759)
chr7 (5-147)||(12141108-12141251)
chr7 (4-143)||(34899412-34899551)
chr7 (5-147)||(28407719-28407861)
chr7 (1-137)||(47590455-47590591)
chr7 (1-136)||(42978754-42978889)
chr7 (1-147)||(39328595-39328737)
chr7 (5-147)||(19404560-19404700)
chr7 (26-143)||(3222910-3223026)
chr7 (4-52)||(13796825-13796873)
chr7 (115-155)||(24319875-24319915)
chr7 (5-155)||(25286980-25287129)
chr7 (4-87)||(19297017-19297100)
chr7 (1-87)||(9449998-9450084)
chr7 (5-95)||(41553288-41553377)
chr7 (5-51)||(46244149-46244195)
chr7 (5-147)||(46700183-46700324)
chr7 (115-164)||(11833447-11833496)
chr7 (110-155)||(15670462-15670507)
chr7 (8-53)||(17773420-17773465)
chr7 (112-152)||(10094866-10094906)
chr7 (5-53)||(24069289-24069337)
chr7 (5-137)||(13592304-13592433)
chr7 (5-100)||(28476374-28476469)
chr7 (5-128)||(38798929-38799052)
chr7 (115-153)||(2623021-2623059)
chr7 (115-153)||(4621034-4621072)
chr7 (125-155)||(10624221-10624251)
chr7 (115-153)||(21991091-21991129)
chr7 (111-153)||(23808751-23808793)
chr7 (115-153)||(27535856-27535894)
chr7 (4-134)||(30756633-30756763)
chr7 (111-153)||(32741168-32741210)
chr7 (120-170)||(33095773-33095823)
chr7 (9-95)||(35133099-35133185)
chr7 (111-153)||(35362776-35362818)
chr7 (5-95)||(35664988-35665078)
chr7 (115-153)||(37375710-37375748)
chr7 (115-153)||(38277226-38277264)
chr7 (111-153)||(43847398-43847440)
chr7 (115-153)||(44482532-44482570)
chr7 (115-153)||(48643480-48643518)
chr7 (115-152)||(8180230-8180267)
chr7 (110-155)||(15123669-15123714)
chr7 (112-153)||(21552123-21552164)
chr7 (115-164)||(30992481-30992530)
chr7 (116-153)||(39707698-39707735)
chr7 (117-153)||(6667826-6667862)
chr7 (103-147)||(31481888-31481932)
chr7 (111-155)||(37400002-37400046)
chr7 (125-153)||(37714903-37714931)
chr7 (5-49)||(44311688-44311732)
chr7 (107-147)||(46821542-46821582)
chr7 (5-53)||(49148010-49148058)
[»] chr5 (52 HSPs)
chr5 (4-147)||(26825574-26825717)
chr5 (1-147)||(24229585-24229731)
chr5 (4-147)||(13007373-13007516)
chr5 (4-147)||(34945537-34945680)
chr5 (1-147)||(14726262-14726408)
chr5 (4-147)||(9113526-9113669)
chr5 (4-147)||(25980301-25980444)
chr5 (1-147)||(38597938-38598084)
chr5 (1-147)||(8096300-8096445)
chr5 (1-147)||(14082197-14082343)
chr5 (1-147)||(38007499-38007644)
chr5 (4-147)||(6011939-6012082)
chr5 (5-147)||(10722906-10723048)
chr5 (5-147)||(26877910-26878051)
chr5 (1-143)||(11976740-11976882)
chr5 (1-143)||(35850940-35851080)
chr5 (6-53)||(11192525-11192572)
chr5 (5-143)||(13422078-13422215)
chr5 (9-147)||(1409647-1409787)
chr5 (5-53)||(8514547-8514595)
chr5 (5-147)||(6217043-6217185)
chr5 (5-155)||(11867794-11867949)
chr5 (115-153)||(7151225-7151263)
chr5 (9-95)||(14211376-14211462)
chr5 (9-95)||(39567419-39567505)
chr5 (5-78)||(41630647-41630720)
chr5 (111-155)||(6281469-6281513)
chr5 (1-41)||(7930318-7930358)
chr5 (15-95)||(24874684-24874764)
chr5 (111-155)||(42396162-42396206)
chr5 (103-146)||(8514445-8514488)
chr5 (77-143)||(11073793-11073857)
chr5 (1-52)||(31391649-31391700)
chr5 (110-153)||(42505067-42505110)
chr5 (9-95)||(2979159-2979245)
chr5 (115-153)||(9196685-9196723)
chr5 (115-153)||(17331757-17331795)
chr5 (115-153)||(23881770-23881808)
chr5 (115-153)||(26294039-26294077)
chr5 (111-153)||(26294728-26294770)
chr5 (9-95)||(28540759-28540845)
chr5 (115-153)||(34431493-34431531)
chr5 (6-52)||(38961573-38961619)
chr5 (115-153)||(39531062-39531100)
chr5 (115-152)||(3740761-3740798)
chr5 (115-152)||(6886847-6886884)
chr5 (115-167)||(4726657-4726709)
chr5 (113-153)||(6639408-6639448)
chr5 (130-166)||(13677529-13677565)
chr5 (1-93)||(19121053-19121145)
chr5 (109-153)||(22978702-22978746)
chr5 (5-49)||(35920895-35920939)
[»] chr3 (84 HSPs)
chr3 (4-147)||(10229620-10229763)
chr3 (4-147)||(9998611-9998754)
chr3 (4-147)||(10108380-10108523)
chr3 (4-147)||(10233214-10233357)
chr3 (1-147)||(45568246-45568392)
chr3 (4-147)||(9797335-9797478)
chr3 (4-143)||(48650539-48650678)
chr3 (4-147)||(52922918-52923061)
chr3 (5-147)||(21313181-21313323)
chr3 (1-143)||(21533614-21533756)
chr3 (1-147)||(40487466-40487612)
chr3 (1-147)||(43017029-43017175)
chr3 (4-147)||(6954497-6954640)
chr3 (1-145)||(33580021-33580165)
chr3 (5-153)||(54149136-54149284)
chr3 (1-147)||(12050449-12050595)
chr3 (1-147)||(46304322-46304467)
chr3 (4-147)||(21431757-21431902)
chr3 (4-141)||(44959780-44959917)
chr3 (4-147)||(40556846-40556989)
chr3 (1-147)||(38545940-38546086)
chr3 (1-147)||(47896293-47896438)
chr3 (4-152)||(7448710-7448858)
chr3 (4-152)||(7456852-7457000)
chr3 (4-147)||(4711626-4711769)
chr3 (5-92)||(42460894-42460981)
chr3 (1-147)||(43488392-43488537)
chr3 (1-143)||(47041853-47041995)
chr3 (1-147)||(36461238-36461378)
chr3 (9-147)||(37040918-37041055)
chr3 (5-95)||(41818360-41818450)
chr3 (33-165)||(31271614-31271747)
chr3 (74-147)||(36910567-36910640)
chr3 (4-128)||(32701635-32701759)
chr3 (9-95)||(21289667-21289753)
chr3 (5-135)||(26275632-26275762)
chr3 (9-147)||(35175553-35175690)
chr3 (115-164)||(3457351-3457400)
chr3 (7-95)||(38142672-38142760)
chr3 (5-52)||(19339320-19339367)
chr3 (5-143)||(20464770-20464913)
chr3 (5-52)||(23799806-23799853)
chr3 (5-52)||(26739253-26739300)
chr3 (1-52)||(38860008-38860059)
chr3 (8-95)||(53807711-53807798)
chr3 (9-95)||(27706079-27706165)
chr3 (115-153)||(53155092-53155130)
chr3 (115-164)||(2192507-2192556)
chr3 (112-153)||(44984527-44984568)
chr3 (115-164)||(45664629-45664678)
chr3 (116-153)||(46732414-46732451)
chr3 (115-164)||(55090350-55090399)
chr3 (9-85)||(7546764-7546840)
chr3 (115-155)||(36691459-36691499)
chr3 (120-164)||(37452121-37452165)
chr3 (115-155)||(51060084-51060124)
chr3 (8-52)||(52115917-52115961)
chr3 (8-95)||(628776-628863)
chr3 (9-52)||(9173897-9173940)
chr3 (110-153)||(14585886-14585929)
chr3 (110-153)||(19645614-19645657)
chr3 (5-52)||(20987651-20987698)
chr3 (111-166)||(45047922-45047977)
chr3 (110-153)||(50981128-50981171)
chr3 (110-153)||(51084262-51084305)
chr3 (5-52)||(53099935-53099981)
chr3 (9-95)||(8914861-8914947)
chr3 (115-153)||(11819513-11819551)
chr3 (115-153)||(13701664-13701702)
chr3 (5-51)||(19619858-19619904)
chr3 (115-153)||(24483358-24483396)
chr3 (118-164)||(34960580-34960626)
chr3 (111-153)||(40012934-40012976)
chr3 (125-171)||(42106562-42106608)
chr3 (9-135)||(42455633-42455759)
chr3 (115-153)||(48401521-48401559)
chr3 (115-153)||(49627766-49627804)
chr3 (9-95)||(51303496-51303582)
chr3 (115-153)||(54706394-54706432)
chr3 (115-153)||(55455291-55455329)
chr3 (115-152)||(1074557-1074594)
chr3 (5-41)||(26716014-26716050)
chr3 (125-153)||(31550349-31550377)
chr3 (115-171)||(33637823-33637879)
[»] chr4 (70 HSPs)
chr4 (1-147)||(17949124-17949271)
chr4 (1-147)||(17952976-17953123)
chr4 (1-147)||(56040447-56040593)
chr4 (4-147)||(43510361-43510504)
chr4 (1-147)||(21686043-21686189)
chr4 (4-147)||(19853313-19853456)
chr4 (4-147)||(32766679-32766822)
chr4 (4-153)||(48257427-48257576)
chr4 (5-147)||(2520945-2521087)
chr4 (1-146)||(24098871-24099014)
chr4 (1-147)||(10496497-10496644)
chr4 (1-143)||(13634277-13634419)
chr4 (56-147)||(4142565-4142656)
chr4 (4-147)||(22611348-22611498)
chr4 (5-140)||(10258709-10258839)
chr4 (1-147)||(26633472-26633618)
chr4 (1-147)||(35348469-35348617)
chr4 (7-87)||(22806704-22806784)
chr4 (5-140)||(29960757-29960892)
chr4 (1-147)||(21662599-21662745)
chr4 (1-147)||(21671363-21671509)
chr4 (5-95)||(43853609-43853699)
chr4 (4-147)||(53811193-53811326)
chr4 (5-95)||(36161877-36161967)
chr4 (1-142)||(53444280-53444422)
chr4 (3-108)||(9178517-9178622)
chr4 (5-52)||(37465648-37465695)
chr4 (5-95)||(9714076-9714166)
chr4 (8-142)||(47320219-47320352)
chr4 (115-153)||(477675-477713)
chr4 (4-94)||(11299864-11299954)
chr4 (115-153)||(18502496-18502534)
chr4 (111-153)||(19745815-19745857)
chr4 (111-153)||(19793949-19793991)
chr4 (115-153)||(20887411-20887449)
chr4 (5-123)||(26090735-26090853)
chr4 (5-51)||(29120276-29120322)
chr4 (112-150)||(39797380-39797418)
chr4 (5-147)||(44596826-44596967)
chr4 (5-95)||(52933802-52933892)
chr4 (5-147)||(52978910-52979052)
chr4 (115-164)||(7060743-7060792)
chr4 (5-164)||(43095794-43095959)
chr4 (5-50)||(45418678-45418723)
chr4 (8-52)||(6155119-6155163)
chr4 (5-140)||(54022026-54022165)
chr4 (5-52)||(22305517-22305564)
chr4 (115-153)||(7084371-7084409)
chr4 (115-153)||(8517113-8517151)
chr4 (5-87)||(12493459-12493541)
chr4 (115-153)||(13965972-13966010)
chr4 (115-153)||(14346839-14346877)
chr4 (115-153)||(24826068-24826106)
chr4 (115-153)||(30416295-30416333)
chr4 (111-153)||(37431581-37431623)
chr4 (115-153)||(38435006-38435044)
chr4 (110-152)||(39838018-39838060)
chr4 (115-153)||(42197982-42198020)
chr4 (115-153)||(43244035-43244073)
chr4 (115-153)||(45350724-45350762)
chr4 (115-153)||(45360203-45360241)
chr4 (115-153)||(46268094-46268132)
chr4 (109-154)||(46990908-46990953)
chr4 (116-153)||(55600200-55600237)
chr4 (5-85)||(7008852-7008932)
chr4 (5-93)||(9048830-9048918)
chr4 (110-170)||(11209950-11210010)
chr4 (115-151)||(31522375-31522411)
chr4 (116-168)||(36123996-36124048)
chr4 (103-147)||(37465748-37465792)
[»] chr2 (78 HSPs)
chr2 (4-147)||(38445321-38445464)
chr2 (1-147)||(5427671-5427817)
chr2 (4-147)||(4778908-4779051)
chr2 (1-147)||(31788608-31788754)
chr2 (5-147)||(4903947-4904089)
chr2 (1-147)||(18763620-18763766)
chr2 (1-147)||(36692026-36692172)
chr2 (1-153)||(11985029-11985181)
chr2 (1-153)||(1421828-1421979)
chr2 (4-147)||(7646633-7646776)
chr2 (4-147)||(33585537-33585680)
chr2 (1-143)||(4041400-4041542)
chr2 (5-147)||(25508870-25509012)
chr2 (13-143)||(29173523-29173653)
chr2 (1-147)||(33923857-33924003)
chr2 (16-147)||(35220495-35220626)
chr2 (1-147)||(7677675-7677821)
chr2 (5-147)||(37876408-37876550)
chr2 (4-147)||(4100491-4100628)
chr2 (17-147)||(19062150-19062279)
chr2 (5-147)||(36942924-36943065)
chr2 (7-147)||(9169059-9169200)
chr2 (1-94)||(12554036-12554129)
chr2 (1-143)||(1415709-1415851)
chr2 (76-147)||(31193138-31193209)
chr2 (5-95)||(6358735-6358825)
chr2 (1-147)||(12677253-12677398)
chr2 (5-153)||(29279361-29279514)
chr2 (9-95)||(10237070-10237156)
chr2 (5-143)||(30399835-30399973)
chr2 (7-95)||(33760047-33760135)
chr2 (115-170)||(13878646-13878701)
chr2 (115-170)||(14018771-14018826)
chr2 (8-95)||(32448470-32448557)
chr2 (111-170)||(36868433-36868492)
chr2 (109-147)||(459060-459098)
chr2 (9-95)||(3309105-3309191)
chr2 (5-95)||(14955685-14955775)
chr2 (5-95)||(28533808-28533898)
chr2 (5-147)||(37994440-37994581)
chr2 (1-95)||(43396973-43397066)
chr2 (110-171)||(11550316-11550377)
chr2 (6-103)||(28871634-28871731)
chr2 (8-155)||(17248941-17249088)
chr2 (115-167)||(17767210-17767262)
chr2 (5-53)||(41694777-41694825)
chr2 (110-166)||(43696292-43696348)
chr2 (5-52)||(10548343-10548390)
chr2 (5-52)||(10929821-10929868)
chr2 (115-150)||(11798195-11798230)
chr2 (5-100)||(16376095-16376190)
chr2 (5-108)||(19028755-19028858)
chr2 (4-95)||(27097261-27097352)
chr2 (5-52)||(32190820-32190867)
chr2 (115-153)||(3527415-3527453)
chr2 (111-153)||(4603970-4604012)
chr2 (115-153)||(7639997-7640035)
chr2 (106-152)||(8064457-8064503)
chr2 (115-153)||(9689639-9689677)
chr2 (111-153)||(9978332-9978374)
chr2 (115-153)||(11942797-11942835)
chr2 (115-153)||(13548573-13548611)
chr2 (115-153)||(16136507-16136545)
chr2 (6-52)||(17151581-17151627)
chr2 (9-95)||(18107604-18107690)
chr2 (115-153)||(20560787-20560825)
chr2 (115-153)||(25068270-25068308)
chr2 (115-153)||(29543222-29543260)
chr2 (110-152)||(31908472-31908514)
chr2 (113-155)||(32711879-32711921)
chr2 (115-153)||(33012477-33012515)
chr2 (9-47)||(33140587-33140625)
chr2 (115-153)||(35333934-35333972)
chr2 (109-143)||(43711790-43711824)
chr2 (7-52)||(18056358-18056403)
chr2 (115-152)||(44942715-44942752)
chr2 (115-155)||(12705115-12705155)
chr2 (115-155)||(34962647-34962687)
[»] chr1 (66 HSPs)
chr1 (3-147)||(35484192-35484336)
chr1 (4-147)||(11462283-11462426)
chr1 (1-155)||(31984306-31984459)
chr1 (4-147)||(21947419-21947562)
chr1 (1-147)||(4413259-4413405)
chr1 (3-146)||(7337465-7337608)
chr1 (1-143)||(14872784-14872926)
chr1 (1-147)||(34878079-34878225)
chr1 (3-147)||(49504396-49504540)
chr1 (1-143)||(10776266-10776408)
chr1 (1-147)||(16989516-16989662)
chr1 (5-147)||(51373659-51373801)
chr1 (1-153)||(29738459-29738611)
chr1 (1-147)||(21687523-21687669)
chr1 (4-147)||(32395146-32395288)
chr1 (5-156)||(13144605-13144755)
chr1 (5-143)||(44915788-44915926)
chr1 (1-147)||(45415703-45415849)
chr1 (34-147)||(26535514-26535627)
chr1 (8-143)||(24583102-24583236)
chr1 (8-143)||(24583298-24583432)
chr1 (5-142)||(27579934-27580071)
chr1 (3-147)||(31919136-31919285)
chr1 (4-87)||(5983984-5984067)
chr1 (5-52)||(14489421-14489468)
chr1 (5-120)||(15431494-15431609)
chr1 (1-87)||(7836657-7836743)
chr1 (9-95)||(34412945-34413031)
chr1 (78-147)||(23289193-23289262)
chr1 (75-147)||(940457-940529)
chr1 (8-52)||(46399122-46399166)
chr1 (1-52)||(3228414-3228465)
chr1 (8-95)||(44543424-44543511)
chr1 (5-147)||(39888331-39888473)
chr1 (5-94)||(16161977-16162066)
chr1 (102-147)||(36894209-36894254)
chr1 (45-141)||(1742476-1742572)
chr1 (59-147)||(8211108-8211196)
chr1 (5-93)||(9341875-9341963)
chr1 (111-155)||(12147714-12147758)
chr1 (3-143)||(19596265-19596405)
chr1 (115-155)||(25032755-25032795)
chr1 (115-167)||(34659295-34659347)
chr1 (5-49)||(49648774-49648818)
chr1 (118-153)||(1141110-1141145)
chr1 (115-154)||(33703177-33703216)
chr1 (115-153)||(4882031-4882069)
chr1 (115-153)||(12872035-12872073)
chr1 (115-153)||(13152856-13152894)
chr1 (115-153)||(17348004-17348042)
chr1 (115-153)||(29205697-29205735)
chr1 (10-52)||(30712197-30712239)
chr1 (9-95)||(36775563-36775649)
chr1 (115-153)||(44517577-44517615)
chr1 (9-95)||(48750338-48750424)
chr1 (5-147)||(50377472-50377614)
chr1 (115-153)||(51418413-51418451)
chr1 (118-155)||(3233203-3233240)
chr1 (110-147)||(5984070-5984107)
chr1 (115-152)||(8758070-8758107)
chr1 (5-42)||(28053623-28053660)
chr1 (6-95)||(31317886-31317975)
chr1 (112-148)||(171531-171567)
chr1 (8-52)||(19061061-19061105)
chr1 (115-143)||(45659422-45659450)
chr1 (115-155)||(49652243-49652283)
[»] chr6 (51 HSPs)
chr6 (4-147)||(67802-67945)
chr6 (1-147)||(12170611-12170757)
chr6 (4-147)||(9341452-9341595)
chr6 (4-143)||(606350-606489)
chr6 (4-147)||(33052969-33053112)
chr6 (1-147)||(3913375-3913521)
chr6 (4-142)||(23128764-23128902)
chr6 (1-147)||(32327021-32327164)
chr6 (12-145)||(21426489-21426622)
chr6 (1-164)||(30894742-30894905)
chr6 (4-147)||(14174872-14175015)
chr6 (4-147)||(14179408-14179551)
chr6 (5-144)||(29255250-29255389)
chr6 (4-147)||(34018706-34018849)
chr6 (1-147)||(7515004-7515149)
chr6 (5-143)||(34185499-34185636)
chr6 (4-143)||(29319682-29319822)
chr6 (5-152)||(30608311-30608458)
chr6 (5-95)||(28981324-28981414)
chr6 (5-147)||(30493679-30493821)
chr6 (5-103)||(679256-679353)
chr6 (5-103)||(9380170-9380268)
chr6 (5-153)||(7975983-7976130)
chr6 (1-52)||(14846117-14846168)
chr6 (12-147)||(32060030-32060165)
chr6 (9-95)||(546182-546268)
chr6 (5-95)||(8102873-8102963)
chr6 (6-52)||(20225999-20226045)
chr6 (6-52)||(22119983-22120029)
chr6 (5-95)||(30776810-30776900)
chr6 (115-153)||(31705594-31705632)
chr6 (5-147)||(127816-127954)
chr6 (115-151)||(4921564-4921600)
chr6 (110-169)||(31984394-31984453)
chr6 (115-153)||(2304492-2304530)
chr6 (115-153)||(4085105-4085143)
chr6 (115-153)||(4660857-4660895)
chr6 (115-153)||(5146355-5146393)
chr6 (115-153)||(12653972-12654010)
chr6 (115-153)||(15589779-15589817)
chr6 (115-153)||(19402506-19402544)
chr6 (115-153)||(23654678-23654716)
chr6 (115-153)||(30813486-30813524)
chr6 (5-147)||(31296967-31297108)
chr6 (115-153)||(31804622-31804660)
chr6 (8-42)||(35086247-35086281)
chr6 (6-95)||(13546554-13546643)
chr6 (5-49)||(528249-528293)
chr6 (9-81)||(14801978-14802050)
chr6 (5-49)||(31852092-31852136)
chr6 (5-93)||(32802693-32802781)
[»] scaffold0050 (1 HSPs)
scaffold0050 (4-147)||(65843-65986)
[»] scaffold0884 (1 HSPs)
scaffold0884 (1-143)||(1778-1920)
[»] scaffold0136 (2 HSPs)
scaffold0136 (3-147)||(9843-9987)
scaffold0136 (5-42)||(34668-34705)
[»] scaffold0026 (1 HSPs)
scaffold0026 (4-143)||(71675-71814)
[»] scaffold0127 (1 HSPs)
scaffold0127 (1-147)||(15634-15780)
[»] scaffold0017 (1 HSPs)
scaffold0017 (5-133)||(32562-32690)
[»] scaffold0219 (1 HSPs)
scaffold0219 (6-140)||(14679-14813)
[»] scaffold0121 (1 HSPs)
scaffold0121 (5-147)||(31075-31217)
[»] scaffold0445 (1 HSPs)
scaffold0445 (1-128)||(1486-1613)
[»] scaffold0088 (1 HSPs)
scaffold0088 (4-95)||(50921-51012)
[»] scaffold0049 (1 HSPs)
scaffold0049 (5-143)||(71105-71243)
[»] scaffold0042 (1 HSPs)
scaffold0042 (5-87)||(92357-92439)
[»] scaffold0603 (1 HSPs)
scaffold0603 (6-153)||(7862-8021)
[»] scaffold0039 (1 HSPs)
scaffold0039 (5-93)||(93253-93341)
[»] scaffold0009 (1 HSPs)
scaffold0009 (9-147)||(57890-58027)
[»] scaffold0064 (1 HSPs)
scaffold0064 (5-93)||(18938-19025)
[»] scaffold0056 (1 HSPs)
scaffold0056 (115-167)||(74593-74645)
[»] scaffold0536 (1 HSPs)
scaffold0536 (115-153)||(3324-3362)
[»] scaffold0157 (1 HSPs)
scaffold0157 (5-87)||(26936-27018)
[»] scaffold0155 (1 HSPs)
scaffold0155 (115-153)||(35504-35542)
[»] scaffold0090 (1 HSPs)
scaffold0090 (111-153)||(11222-11264)
[»] scaffold0888 (1 HSPs)
scaffold0888 (5-93)||(1533-1621)
[»] scaffold0007 (1 HSPs)
scaffold0007 (110-154)||(201730-201774)


Alignment Details
Target: chr8 (Bit Score: 112; Significance: 9e-57; HSPs: 69)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 9e-57
Query Start/End: Original strand, 1 - 220
Target Start/End: Complemental strand, 7677228 - 7677006
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||  ||||||||||||| |||| |||||||| |||||| |||||| | ||    
T  7677228 taggttttatcatattatttgtaagcattttgccgttgtatgttattaacttgggtgctgtgactttgttcacagattcactctttacgtttttagcgat 7677129  T
Q  101 gtttgt--atatgatatactctatcgatttaaatgaatgaatatcg-tttatttttatgagaaaaaatatatatttcgaacgcatttagtgtcgtgactc 197  Q
    ||||||  ||||||| |||| ||||||||||||||||||||||| | ||||||||| ||| |||||||| || |||   |||||| |||| |||||||||    
T  7677128 gtttgtatatatgatgtactatatcgatttaaatgaatgaatatggttttatttttgtgaaaaaaaataaatctttgtgacgcatatagtatcgtgactc 7677029  T
Q  198 cgtcaaaaacaaccacgtgatgt 220  Q
    ||| |||||||||||||||||||    
T  7677028 cgtgaaaaacaaccacgtgatgt 7677006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 23230787 - 23230933
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||| |||||| ||||| | ||    
T  23230787 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccatttacacttttagcgat 23230886  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  23230887 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 23230933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 7883186 - 7883040
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||  |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | ||    
T  7883186 taggttttatcatattatttgtaggcattttgccgttgtatcctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgat 7883087  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||| ||||| ||||||||||||||||||    
T  7883086 gtttgtatctgatgtactctattgatttgaatgaatgaatatcgttt 7883040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 16928702 - 16928557
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||   ||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||    
T  16928702 taggttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgat 16928603  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgtt 146  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||    
T  16928602 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtt 16928557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 17693556 - 17693412
Alignment:
Q  4 gttttatcatattatttgtaagcatttt-gttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 102  Q
    |||||||||||||||||||| ||||||| |||||||||||||||||||||   || ||||| |||  || ||||||||| ||||||||||||| | ||||    
T  17693556 gttttatcatattatttgtaggcatttttgttgttgtatgttattaacttggatgttgtgagtttggtcgtagattcactctttacatttttagcgatgt 17693457  T
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||| |||| ||||||||| |||| | ||||||||||||||||    
T  17693456 ttgtatttgatgtactctatcaatttgagtgaatgaatatcgttt 17693412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 31013550 - 31013407
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| |||||||    
T  31013550 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcaatgtt 31013451  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||| ||||||| | ||||||||| ||||||||    
T  31013450 tgtatctgatgtactttatcgatatgaatgaatgactatcgttt 31013407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 9637354 - 9637208
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||| || ||||||||| |||||||| |||||||||  ||| | ||| ||| ||| ||| |||||| ||||| ||||||   ||    
T  9637354 taggttttatcatattatttttaggcattttgtcgttgtatgctattaacttgggtgttatgagtttgttcgtagtttcaccatttacgtttttagtgat 9637255  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| ||||||||| |||||||||||||||||||||||    
T  9637254 gtttgtatctgatgtactctatcaatttaaatgaatgaatatcgttt 9637208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 25191010 - 25190865
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| |||||||  | || |||| |||||||||  ||||||||| ||| |||  ||||||||| |||||  ||||| ||||    
T  25191010 taggttttatcatattatttgtaggcatttttctattttatgctattaacttgggtgctgtgagtttgttcgcagattcaccttttacgattttagcaat 25190911  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgtt 146  Q
    |||||||| |||| || ||||||||||| |||||||||||||||||    
T  25190910 gtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgtt 25190865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 30568266 - 30568124
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||| ||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||    
T  30568266 taggttttatcatgttatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgat 30568167  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||||||||||||| || |||||| |||| ||||||||||||||    
T  30568166 gtttgtatatgatgtaatctatcaatttgaatgaatgaatatc 30568124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 33214613 - 33214470
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||||| ||  |||||||  ||| |||| |||||||||| ||||||| | ||| ||| |||||||||||||||| |||||| | | |||    
T  33214613 gttttatcatattatttttagacattttgccgttttatgctattaactttggtgctgttagtttgttcgtagattcaccctttacgtttttagcgacgtt 33214514  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    | ||| | || |||||||||||||| ||||||||||||||||||    
T  33214513 tatatctaatgtactctatcgatttgaatgaatgaatatcgttt 33214470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 45445752 - 45445610
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||||||| |||| |||||||||   || ||||| ||| |||  | ||||||| ||||| |||||| | ||||||    
T  45445752 ttttatcatattatttgtaggcattttgttgttttatgctattaacttggatgttgtgagtttgttcgcatattcaccttttacgtttttaacgatgttt 45445653  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| || || |||||||| ||||||||||||||||||    
T  45445652 gtatctgatgtaatccatcgatttgaatgaatgaatatcgttt 45445610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 37971427 - 37971577
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttat---- 96  Q
    |||||||||||| |||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||||||||||         
T  37971427 taggttttatcacattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttaattag 37971526  T
Q  97 caatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    | |||||||||| |||| |||||||| ||||| | ||||||||||||||||    
T  37971527 cgatgtttgtatctgatgtactctattgatttgagtgaatgaatatcgttt 37971577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 40211243 - 40211099
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta--catttttatcaatgt 102  Q
    ||||||||||||||||||||||||| ||  |||||||| ||||||  |  ||| ||||| ||| ||| |||||||||||||||  | |||||| | ||||    
T  40211243 ttttatcatattatttgtaagcattatgccgttgtatgctattaatctgggtgatgtgagtttgttcgtagattcaccctttacgcgtttttagcgatgt 40211144  T
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    || ||| |||| |||||||||||||| ||||||||||||||||||    
T  40211143 ttatatctgatgtactctatcgatttgaatgaatgaatatcgttt 40211099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 28086753 - 28086611
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||||  || || ||| ||| |||| | ||||| | | ||| |||||| | ||||||    
T  28086753 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttaagtactatgagtttgttcacatattcatcatctacgtttttagcgatgttt 28086654  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| |||| |||| |||| ||| ||||||||||||||    
T  28086653 gtatctgatgtactatatcaatttgaataaatgaatatcgttt 28086611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 15344459 - 15344546
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| ||||||    
T  15344459 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttta 15344546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 15433524 - 15433611
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| ||||||    
T  15433524 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttta 15433611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 15524828 - 15524915
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| ||||||    
T  15524828 tatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttta 15524915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 84
Target Start/End: Complemental strand, 18890640 - 18890561
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccct 84  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  |||||||||||    
T  18890640 ttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccct 18890561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 41684592 - 41684662
Alignment:
Q  76 attcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgtt 146  Q
    ||||||||||||| |||||| | |||||| ||| |||| ||||||||| ||||||||||||||||||||||    
T  41684592 attcaccctttacgtttttagcgatgtttatatctgatgtactctatcaatttaaatgaatgaatatcgtt 41684662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 101
Target Start/End: Complemental strand, 29617215 - 29617119
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatg 101  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||   || ||||| ||| |||  |||||| |||||||  |||||| |||||    
T  29617215 ttttatcatattatttgtaggcattttgttgttgtatgctattaacttaaatgttgtgagtttgttcgcagattcgccctttatgtttttaacaatg 29617119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 8 - 143
Target Start/End: Complemental strand, 1236635 - 1236501
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgta 107  Q
    ||||||| ||||| || ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| |||||| |||| ||  |     
T  1236635 tatcatactatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgtttttagcaatcttgat- 1236537  T
Q  108 tatgatatactctatcgatttaaatgaatgaatatc 143  Q
    | |||| || ||||||||||| ||||||||||||||    
T  1236536 tctgatgtattctatcgatttgaatgaatgaatatc 1236501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 9 - 100
Target Start/End: Original strand, 41896669 - 41896760
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||| ||| |||||| ||||    
T  41896669 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgtttttagcaat 41896760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 13570471 - 13570429
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  13570471 gatatactctatcaatttaaatgaatgaatatcgtttattttt 13570429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Complemental strand, 14916129 - 14916031
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||| |||||| ||||||||  |||||||| |||||||||  ||||  ||| |||||||  ||||||||| ||||| |||||| |||||||    
T  14916129 ttttatcatattgtttgtaggcattttgcagttgtatgctattaacttgagtgcattgagttttttcgcagattcaccatttacgtttttaacaatgtt 14916031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 139
Target Start/End: Complemental strand, 24186602 - 24186468
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||| || ||||||||  || ||||  |||||||||  ||| | ||| ||| ||   ||||||| | ||||| |||||||| ||||||    
T  24186602 ttttatcatattatttataggcattttgccgtcgtatactattaacttaggtgttatgagtttgttagcagattcatcttttacgtttttatcgatgttt 24186503  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaa 139  Q
    ||||||||| ||||||||| |||| ||| ||||||    
T  24186502 gtatatgatgtactctatctatttgaataaatgaa 24186468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 103 - 153
Target Start/End: Complemental strand, 24842786 - 24842736
Alignment:
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||| ||||||||||||||||||| |||||||||||||| |||||||||    
T  24842786 ttgtatttgatatactctatcgattttaatgaatgaatatcatttattttt 24842736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 29939444 - 29939586
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta-catttttatcaa 99  Q
    |||||||||||||||||||||||  |||||||  |||||||| |||||||||   || ||||||||  ||| |||||||| | ||||   |||||| | |    
T  29939444 taggttttatcatattatttgtagtcattttgccgttgtatgatattaacttagatgttgtgacttcgttcgtagattcatcttttatgttttttaacga 29939543  T
Q  100 tgtttgtatatgatatactctatcgatttaaatgaatgaatat 142  Q
    || |||||| |||| |||| ||||||||| ||| |||||||||    
T  29939544 tgattgtatctgatgtactatatcgatttgaataaatgaatat 29939586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 40619014 - 40618872
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||| |||| ||||||||  |||||||| |||||||||  | | ||||  ||| |||  ||||  ||  ||||| |||||| | ||||||    
T  40619014 ttttatcatattatgtgtatgcattttgccgttgtatgctattaacttgggggttgtgcgtttgttcgcagatctacaatttacgtttttagcgatgttt 40618915  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| || |||||| |||| ||||||||||||||||||    
T  40618914 gtatctgatgtattctatcaatttgaatgaatgaatatcgttt 40618872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 43833937 - 43833847
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||   ||||||||| ||||| ||||||    
T  43833937 ttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccatttactttttta 43833847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 8412394 - 8412321
Alignment:
Q  74 agattcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||||||||  |||||| | |||||||||| |||| || ||||| ||||| ||||||||||||||||||    
T  8412394 agattcaccctttatgtttttagcgatgtttgtatctgatttaatctattgatttgaatgaatgaatatcgttt 8412321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 111 - 164
Target Start/End: Original strand, 37613061 - 37613114
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    ||||||||||||| |||| |||||||||||||||||||||||| | ||||||||    
T  37613061 gatatactctatcaatttgaatgaatgaatatcgtttatttttgtaagaaaaaa 37613114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 38545520 - 38545476
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||    
T  38545520 gatatactctatcaatttgaatgaatgaatatcgtttatttttat 38545476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 8867953 - 8868054
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttat---taacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatg 101  Q
    ||||||||||||||||||| ||||||||| ||||||||||||   ||||||  ||| ||||| ||| |||  | ||||||| ||||| |||||| |||||    
T  8867953 ttttatcatattatttgtaggcattttgtcgttgtatgttatttataacttgggtggtgtgagtttgttcgcaaattcaccttttacgtttttagcaatg 8868052  T
Q  102 tt 103  Q
    ||    
T  8868053 tt 8868054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 63
Target Start/End: Original strand, 10377836 - 10377895
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtga 63  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  |||||||||    
T  10377836 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtga 10377895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20553186 - 20553135
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||||||    
T  20553186 taggttttatcatattatttgtaggcattttgccgttgtatgctattaactt 20553135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 5046902 - 5046948
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||||||| ||||||| | ||||||||||||||||||    
T  5046902 tttatcatattatttgtaggcattttatcgttgtatgttattaactt 5046948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 7198136 - 7198046
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||| | | ||||||| |||||||| |||||| ||  ||| ||||| ||| |||  ||||||||||||||| ||||||    
T  7198136 ttttatcatattatttgcaggaattttgtcgttgtatgctattaatttgggtgttgtgagtttattcgcagattcaccctttacgttttta 7198046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 14585829 - 14585915
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| || |||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||| ||| ||||||    
T  14585829 atcatattatttgtaggcgttttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgttttta 14585915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 39067394 - 39067352
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| ||||||| |||||||||||||||||||||    
T  39067394 gatatactctatcaatttaaaagaatgaatatcgtttattttt 39067352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 41060204 - 41060114
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||||||  ||||||||||||||||| ||| || ||  ||| ||||| ||| |||  ||||||| ||||||| ||||||    
T  41060204 ttttatcatattatttgtagccattttgttgttgtatgctatcaatttgggtgatgtgagtttgttcgcagattcatcctttacgttttta 41060114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 110 - 164
Target Start/End: Original strand, 41362157 - 41362211
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    |||| ||||||||| |||| |||||||||||||||||||||||||| | ||||||    
T  41362157 tgatgtactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaaaa 41362211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 11968033 - 11967996
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    ||||||||| ||||||||||||||||||||||||||||    
T  11968033 tactctatcaatttaaatgaatgaatatcgtttatttt 11967996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 27498307 - 27498170
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||| ||  ||||||||  || |||||||| |||||  ||| | |||  || ||   |||||||||||||||  |||||   ||||||    
T  27498307 ttttatcatattatttatagacattttgtctttatatgttatgaacttgggtgttatgagcttgtttgcagattcaccctttacgattttaatgatgttt 27498208  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatat 142  Q
    |||| |||| ||||||||| |||| |||||||||||||    
T  27498207 gtatctgatgtactctatcaatttgaatgaatgaatat 27498170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 5333577 - 5333621
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 49  Q
    |||| |||||||||||||| |||||||||||||||||| ||||||    
T  5333577 ttttgtcatattatttgtatgcattttgttgttgtatgctattaa 5333621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 13575909 - 13575869
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||| ||||||||||||||||||||| |||||||||    
T  13575909 tactctatcaatttaaatgaatgaatatcgtctatttttat 13575869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 429032 - 428989
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttatta 48  Q
    |||||||||||||||| |||||||||| | ||||||||||||||    
T  429032 ttttatcatattatttataagcattttttcgttgtatgttatta 428989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 81
Target Start/End: Complemental strand, 471107 - 471029
Alignment:
Q  5 ttttatcatattatttgtaagca--ttttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcac 81  Q
    ||||||||||||||||||| |||  |||||| | ||||||||||||||||  ||| ||||| ||| ||| |||||||||    
T  471107 ttttatcatattatttgtaggcattttttgtcgatgtatgttattaacttgggtgatgtgattttgttcgtagattcac 471029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20559689 - 20559638
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||||||  ||||||||  |||||||| |||||||||    
T  20559689 taggttttatcatattatttgtgggcattttgccgttgtatgctattaactt 20559638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 20571251 - 20571200
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||||||  ||||||||  |||||||| |||||||||    
T  20571251 taggttttatcatattatttgtgggcattttgccgttgtatgctattaactt 20571200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 28 - 147
Target Start/End: Original strand, 21237959 - 21238077
Alignment:
Q  28 ttttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatgatatactctatcgatt 127  Q
    |||||| |||||||  ||||||| |  ||| ||||| ||| |||| ||||||||||||||| |||||| | ||| |||  |||||| || |||||| |||    
T  21237959 ttttgtcgttgtatcctattaacatgggtgttgtgagtttgttcacagattcaccctttacgtttttagcgatg-ttgattatgatgtattctatcaatt 21238057  T
Q  128 taaatgaatgaatatcgttt 147  Q
    | ||||||||||||| ||||    
T  21238058 tgaatgaatgaatattgttt 21238077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 27110406 - 27110259
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||||||  |||||| | |||||||| |||||||||  ||| ||||| ||| |||  | ||||| | ||| ||||||||   ||||||    
T  27110406 ttttatcatattatttgtagacattttatcgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcttttgcatttttagtgatgttt 27110307  T
Q  105 gtatatgatat-----actctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| |     |||||||| ||| |||||||||| ||||||||    
T  27110306 gtatctgatgtgatgcactctatcaattcaaatgaatgattatcgttt 27110259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 2234170 - 2234132
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  2234170 tactctatcaatttgaatgaatgaatatcgtttattttt 2234132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 2968944 - 2968982
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  2968944 tactctatcaatttgaatgaatgaatatcgtttattttt 2968982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 4757577 - 4757619
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatga 157  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||    
T  4757577 tactctatcaatttgaatgaatgaatatcgtttagttttatga 4757619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 7281977 - 7282019
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||  ||| |||||||||||||||||||||||||    
T  7281977 gatatactctataaattaaaatgaatgaatatcgtttattttt 7282019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 15286732 - 15286694
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  15286732 tactctatcaatttaaatgaatgaatatcatttattttt 15286694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 15467101 - 15467063
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  15467101 tactctatcaatttaaatgaatgaatatcatttattttt 15467063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 24790870 - 24790832
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  24790870 tactctatcaatttgaatgaatgaatatcgtttattttt 24790832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 31202877 - 31202915
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  31202877 tactctatcaatttgaatgaatgaatatcgtttattttt 31202915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 1809938 - 1809901
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  1809938 tactctatcaatttgaatgaatgaatatcgtttatttt 1809901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 147
Target Start/End: Original strand, 10377931 - 10377964
Alignment:
Q  114 atactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||||||||| ||||||||||||||||||    
T  10377931 atactctatcgatttgaatgaatgaatatcgttt 10377964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 30026585 - 30026544
Alignment:
Q  112 atatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||| |||| ||||||| ||||||||||||||||    
T  30026585 atatactctatcaatttgaatgaataaatatcgtttattttt 30026544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 33347461 - 33347372
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||||| |||||||||  ||||||| |||||| ||  ||| | ||| ||| |||  ||||||||| ||||| ||||||    
T  33347461 tttatcatattatttgtaggcattttgtcattgtatgctattaaattaggtgttatgagtttgttcgcagattcaccttttaccttttta 33347372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 86
Target Start/End: Original strand, 34493150 - 34493231
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttt 86  Q
    |||||| ||||||| | || ||||||||| |||| |||||||||||||  ||  ||||| ||| ||| ||||||||||||||    
T  34493150 ttttatgatattatatataggcattttgtcgttgcatgttattaacttgagttttgtgagtttgttcgtagattcacccttt 34493231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 6394294 - 6394250
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 49  Q
    ||||||||||||||||||| | |||||| |||| |||||||||||    
T  6394294 ttttatcatattatttgtatgtattttgatgttttatgttattaa 6394250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 9799722 - 9799678
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttattttta 154  Q
    |||| ||||||||| |||| |||||||||||||| ||||||||||    
T  9799722 tgatgtactctatcaatttgaatgaatgaatatcatttattttta 9799678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 10254351 - 10254395
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 49  Q
    |||| |||||||||||||| ||||||||||||  |||||||||||    
T  10254351 ttttgtcatattatttgtacgcattttgttgtcttatgttattaa 10254395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 20227219 - 20227175
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 49  Q
    |||||||||||||||||||  ||||| ||||||||||| ||||||    
T  20227219 ttttatcatattatttgtagacatttcgttgttgtatgctattaa 20227175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 151
Target Start/End: Complemental strand, 26673486 - 26673446
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattt 151  Q
    ||||||||||||| ||||||||||||| ||||| |||||||    
T  26673486 gatatactctatcaatttaaatgaatggatatcatttattt 26673446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 88; Significance: 2e-42; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 40993304 - 40993447
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  40993304 gttttatcatattatttgtaggcattttgtcgttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 40993403  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||||||||||||||||||||||    
T  40993404 tgtatctgatgtactctatcgatttaaatgaatgaatatcgttt 40993447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 9977153 - 9977011
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||| ||  |||||||| |||||||| |||||||||   || ||||| |||||||| ||||||||||||||| |||||| ||||||||    
T  9977153 ttttatcatattatttttagacattttgtcgttgtatgctattaacttggatgttgtgaattttttcacagattcaccctttacgtttttagcaatgttt 9977054  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| ||||||||| |||||||||||||||||||||||    
T  9977053 gtatctgatgtactctatcaatttaaatgaatgaatatcgttt 9977011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8001493 - 8001347
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||| || ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | ||    
T  8001493 taggttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgat 8001394  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| ||||  ||||||||||||| ||||||||||||||||||    
T  8001393 gtttgtatctgatgcactctatcgatttgaatgaatgaatatcgttt 8001347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 37837405 - 37837253
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||| ||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  | ||||||||||||| |||||| | ||    
T  37837405 taggttttatcatattacttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgat 37837306  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| |||||    
T  37837305 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtttgttttt 37837253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 45349746 - 45349594
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||  || |||||||||||| |||||| | ||    
T  45349746 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcaggttcaccctttacgtttttagcgat 45349647  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
     ||||||| |||| |||||||||||||||||| |||||||||||||| |||||    
T  45349646 atttgtatctgatgtactctatcgatttaaattaatgaatatcgttttttttt 45349594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 28044703 - 28044557
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||| ||  |||||||  |||||||| |||||||||   || | ||| ||| ||| |||||||||||||||| |||||| | ||    
T  28044703 taggttttatcatattatttttagacattttgccgttgtatgctattaacttggatgttatgagtttgttcgtagattcaccctttacgtttttagcgat 28044604  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  28044603 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 28044557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 48061566 - 48061712
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| | ||| ||| |||  ||||||||||||||| ||||||   ||    
T  48061566 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttatgagtttgttcgcagattcaccctttacgtttttagagat 48061665  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||  |||| |||||||||||||| ||||||||||||||||||    
T  48061666 gtttgtacctgatgtactctatcgatttgaatgaatgaatatcgttt 48061712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 39171537 - 39171397
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||| ||| ||| ||   ||||||||||||||| |||||| | ||    
T  39171537 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctatgagtttgtttgcagattcaccctttacgtttttagcgat 39171438  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaata 141  Q
    |||||||| |||| |||||||||||||| ||||||| ||||    
T  39171437 gtttgtatctgatgtactctatcgatttgaatgaataaata 39171397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 48316759 - 48316620
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||  |||||| | ||    
T  48316759 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttaggtttttagcgat 48316660  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||       |||||||||||||||| ||||||||||||||||||    
T  48316659 gtttg-------tatactctatcgatttgaatgaatgaatatcgttt 48316620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 12141251 - 12141108
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgt-gctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||||||| ||||||||  |||||||| |||||||||  || | ||||| ||| |||  | ||||||| ||||| |||||| | |||||    
T  12141251 ttttatcatattatttgtatgcattttgccgttgtatgctattaacttgggttgttgtgagtttgttcgcatattcaccttttacgtttttagcgatgtt 12141152  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  12141151 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 12141108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 34899551 - 34899412
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||   || ||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  34899551 gttttatcatattatttgtatgcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 34899452  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||||| |||| ||||||||| |||| ||||||| ||||||    
T  34899451 tgtatttgatgtactctatcaatttgaatgaataaatatc 34899412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 28407861 - 28407719
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||||||  |||||||  |||||||| |||||||||   |||||||| ||| |||  ||||| ||||||||  |||||| | ||||||    
T  28407861 ttttatcatattatttgtagacattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagatttaccctttatgtttttagcgatgttt 28407762  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| ||||||||| |||| ||||||||||||||||||    
T  28407761 gtatttgatgtactctatcaatttgaatgaatgaatatcgttt 28407719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 47590455 - 47590591
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||| | |||||||||  ||| ||||| ||| ||   ||||| ||||||||| |||| | | ||    
T  47590455 taggttttatcatattatttgtaggcattttgccgttgtaagctattaacttgggtgttgtgagtttgtttgcagatttaccctttacgttttcagcgat 47590554  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatg 137  Q
    |||| ||| ||||||||||||||||||| ||||||||    
T  47590555 gtttatatctgatatactctatcgatttgaatgaatg 47590591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 136
Target Start/End: Original strand, 42978754 - 42978889
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||| |||| ||||||||  |||||||| |||||||||  ||| ||||| ||  |||  ||||||||||||||| |||||| | ||    
T  42978754 taggttttatcatattatatgtaggcattttgccgttgtatgctattaacttgggtgttgtgagttcgttcgcagattcaccctttacgtttttagcgat 42978853  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaat 136  Q
    |||||||| ||||  |||||||| |||| |||||||    
T  42978854 gtttgtatctgatggactctatcaatttgaatgaat 42978889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 39328737 - 39328595
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||   |||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  ||||| ||| ||||| |||| | | ||    
T  39328737 taggttttatcatatt---tgtaggcattttgccgttttatgctattaacttgggtgctgtgaatttgttcgcagatttaccttttacgtttt-agcgat 39328642  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| || || |||||||| ||||||||||||||||||    
T  39328641 gtttgtatttgatgtaatccatcgatttgaatgaatgaatatcgttt 39328595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 19404700 - 19404560
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| || |||||  |||| | | |||||||||   |||||||| ||| |||  ||||||| |||||||||||||| | |||||     
T  19404700 ttttatcatattatttgtaggctttttgccgttgcacgctattaacttggatgctgtgagtttgttcgcagattcatcctttacatttttagcgatgttc 19404601  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| ||||||||| |  | |||||||| |||||||||    
T  19404600 gtatctgatgtactctatcaa--tgaatgaatggatatcgttt 19404560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 143
Target Start/End: Complemental strand, 3223026 - 3222910
Alignment:
Q  26 cattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatgatatactctatcga 125  Q
    |||||||  |||||||||||||||||| |||| ||||| ||| |||||||||| | ||||||| |||||| | || ||| | | |||| || | |||| |    
T  3223026 cattttgccgttgtatgttattaacttgtgtgttgtgagtttgttcatagatttatcctttacgtttttagcgatatttat-tctgatgtattatatcaa 3222928  T
Q  126 tttaaatgaatgaatatc 143  Q
    ||||||||||||||||||    
T  3222927 tttaaatgaatgaatatc 3222910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 13796873 - 13796825
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||    
T  13796873 gttttatcatattatttgtaggcattttgtcgttgtatgctattaactt 13796825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 24319915 - 24319875
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||| |||||||||||||||||||||||||||||||    
T  24319915 tactctatcaatttaaatgaatgaatatcgtttatttttat 24319875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 155
Target Start/End: Complemental strand, 25287129 - 25286980
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||||||  ||||||| ||||||||| ||||||||    || ||||| | ||| |  |||||||   |||||||||||| | || |||    
T  25287129 ttttatcatattatttgtagccattttgctgttgtatgctattaactcggatgttgtgagtatttgc--agattcattttttacatttttaacgatcttt 25287032  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcg-tttatttttat 155  Q
     ||| |||| ||||||||| |||| ||||||| ||||||| |||||||||||    
T  25287031 atatctgatgtactctatcaatttgaatgaataaatatcgttttatttttat 25286980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 19297017 - 19297100
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 87  Q
    |||||||||||||||||||| |||||||| |||| |||| |||||| ||  ||| ||||| ||| |||  ||||||||||||||    
T  19297017 gttttatcatattatttgtaggcattttgctgttatatgctattaatttgggtgttgtgagtttgttcgcagattcacccttta 19297100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 9450084 - 9449998
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 87  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||| ||  ||| ||||| ||| |||  | ||||||||||||    
T  9450084 taggttttatcatattatttgtaggcattttgccgttgtatgctattaatttaggtgttgtgagtttgttcgcatattcacccttta 9449998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 41553377 - 41553288
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||| |||| || | ||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| ||||||    
T  41553377 ttttatcatatcatttatacgtattttgccgttgtatgctattaacttg-gtgctgtgagtttgttcctagattcaccctttacgttttta 41553288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 46244195 - 46244149
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaact 51  Q
    ||||||||||||||||||| |||||||||  ||||||||||||||||    
T  46244195 ttttatcatattatttgtaggcattttgtcattgtatgttattaact 46244149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 46700183 - 46700324
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||| || ||||||||  ||| |||| ||||||||   ||| ||||| ||| ||   ||||||||||||||  |||||| | || |||    
T  46700183 ttttatcatattatttataggcattttgccgttatatgctattaactagggtgttgtgagtttgttgc-agattcaccctttatgtttttaacgattttt 46700281  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||  |||| ||||||||| |||  ||||||||||||||||||    
T  46700282 gtacctgatgtactctatcaattagaatgaatgaatatcgttt 46700324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 11833447 - 11833496
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    ||||||||| |||| |||||||||||||||||||||||||| | ||||||    
T  11833447 tactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaaaa 11833496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 15670507 - 15670462
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    |||||||||| ||| |||| ||||||||||||||||||||||||||    
T  15670507 tgatatactcaatcaatttgaatgaatgaatatcgtttatttttat 15670462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 53
Target Start/End: Complemental strand, 17773465 - 17773420
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttt 53  Q
    ||||||||||||||||||||||||  ||||||||| ||||||||||    
T  17773465 tatcatattatttgtaagcattttactgttgtatgctattaacttt 17773420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 112 - 152
Target Start/End: Original strand, 10094866 - 10094906
Alignment:
Q  112 atatactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  10094866 atatactctatcaatttgaatgaatgaatatcgtttatttt 10094906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 24069337 - 24069289
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttt 53  Q
    ||||||||||||||||||| ||||||| | |||||||| ||||||||||    
T  24069337 ttttatcatattatttgtaggcattttatcgttgtatgctattaacttt 24069289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 137
Target Start/End: Complemental strand, 13592433 - 13592304
Alignment:
Q  5 ttttatcatat-tatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||| | |||||| ||||| ||| ||| |||| |||||||||   |||||||| ||| |||  ||||||| |||||||||||||| || || |    
T  13592433 ttttatcatatatttttgtaggcattatgtcgttatatgctattaacttcgatgctgtgagtttgttcgcagattcatcctttacatttttagcagtg-t 13592335  T
Q  104 tgtatatgatatactctatcgatttaaatgaatg 137  Q
    || |||||   |||||||||||||| ||||||||    
T  13592334 tgaatatg---tactctatcgattttaatgaatg 13592304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 28476374 - 28476469
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||| ||||||||  ||   |||||||||||||  ||||||||| ||| ||   ||||||||| ||||| |||||| ||||    
T  28476374 ttttatcatattatttgtaggcattttgccgtgcaatgttattaacttgagtgctgtgagtttgtttgcagattcaccatttacgtttttagcaat 28476469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 128
Target Start/End: Original strand, 38798929 - 38799052
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||  ||  |||| |||||||||   || ||||| ||| |||  ||||||||| | ||| |||||| | ||||||    
T  38798929 ttttatcatattatttgtaggcattttgccgtcttatgctattaacttggatgttgtgagtttgttcgcagattcaccttgtacgtttttaacgatgttt 38799028  T
Q  105 gtatatgatatactctatcgattt 128  Q
    ||| ||||  || |||||||||||    
T  38799029 gtacatgacgtaatctatcgattt 38799052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 2623021 - 2623059
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  2623021 tactctatcaatttgaatgaatgaatatcgtttattttt 2623059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 4621072 - 4621034
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  4621072 tactctatcaatttgaatgaatgaatatcgtttattttt 4621034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 155
Target Start/End: Original strand, 10624221 - 10624251
Alignment:
Q  125 atttaaatgaatgaatatcgtttatttttat 155  Q
    |||||||||||||||||||||||||||||||    
T  10624221 atttaaatgaatgaatatcgtttatttttat 10624251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 21991091 - 21991129
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  21991091 tactctatcaatttgaatgaatgaatatcgtttattttt 21991129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 23808751 - 23808793
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||| || |||| ||||||||||||||||||||||||    
T  23808751 gatatactctctcaatttgaatgaatgaatatcgtttattttt 23808793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 27535856 - 27535894
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  27535856 tactctatcaatttaaatgaataaatatcgtttattttt 27535894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 4 - 134
Target Start/End: Complemental strand, 30756763 - 30756633
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||||| || ||||||||| ||| |||| | |||||||  ||| ||| | ||  |||  ||||||| ||||||| ||||||   |||||    
T  30756763 gttttatcatattatttataggcattttgtcgttttatgctgttaacttaggtgttgtaagttagttcgcagattcagcctttacgtttttagagatgtt 30756664  T
Q  104 tgtatatgatatactctatcgatttaaatga 134  Q
    |||||||| | |||| | ||||||| |||||    
T  30756663 tgtatatggtgtactatgtcgatttgaatga 30756633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 32741168 - 32741210
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||| ||| ||||||||||||||||||||    
T  32741168 gatatactctatcaatttgaataaatgaatatcgtttattttt 32741210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 170
Target Start/End: Complemental strand, 33095823 - 33095773
Alignment:
Q  120 tatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 170  Q
    ||||||||| |||||||||||||||||||||||| | | |||| |||||||    
T  33095823 tatcgatttgaatgaatgaatatcgtttatttttgtaaaaaaatatatata 33095773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 35133099 - 35133185
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||| || ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||| ||| ||||||    
T  35133099 atcatattatttctaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcaccctatacgttttta 35133185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 35362818 - 35362776
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| ||||||||||||||||||| || ||||||    
T  35362818 gatatactctatcaatttaaatgaatgaatatctttaattttt 35362776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 35665078 - 35664988
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||| |  ||||||||| |||||||| |||||||||  || |||||| ||| |||| |||||   ||||||| ||||||    
T  35665078 ttttatcatattattttttggcattttgtcgttgtatgctattaacttgggtactgtgagtttgttcacagatttctcctttacgttttta 35664988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 37375748 - 37375710
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  37375748 tactctatcaatttgaatgaatgaatatcgtttattttt 37375710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 38277226 - 38277264
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  38277226 tactctatcaatttgaatgaatgaatatcgtttattttt 38277264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 43847398 - 43847440
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||| |||||||||||||| |||||||||    
T  43847398 gatatactctatcaatttgaatgaatgaatatcatttattttt 43847440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 44482570 - 44482532
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  44482570 tactctatcaatttgaatgaatgaatatcgtttattttt 44482532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 48643518 - 48643480
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  48643518 tactctatcaatttgaatgaatgaatatcgtttattttt 48643480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 8180230 - 8180267
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  8180230 tactctatcaatttgaatgaatgaatatcgtttatttt 8180267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 15123714 - 15123669
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    |||| ||||||||| |||| |||||||||||||| |||||||||||    
T  15123714 tgatctactctatcaatttgaatgaatgaatatcatttatttttat 15123669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 21552164 - 21552123
Alignment:
Q  112 atatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||| |||||||||||||||| |||||| |||||    
T  21552164 atatactctatcaatttaaatgaatgaatgtcgtttgttttt 21552123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 30992530 - 30992481
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    ||||||||| |||| |||||||||||||| ||||||||||| | ||||||    
T  30992530 tactctatcaatttgaatgaatgaatatcatttatttttataaaaaaaaa 30992481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 153
Target Start/End: Original strand, 39707698 - 39707735
Alignment:
Q  116 actctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  39707698 actctatcaatttgaatgaatgaatatcgtttattttt 39707735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 153
Target Start/End: Original strand, 6667826 - 6667862
Alignment:
Q  117 ctctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||| |||| ||||||||||||||||||||||||    
T  6667826 ctctatcaatttgaatgaatgaatatcgtttattttt 6667862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Complemental strand, 31481932 - 31481888
Alignment:
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||||| || |||||| |||| ||||||||||||||||||    
T  31481932 ttgtatatgatgtattctatcaatttgaatgaatgaatatcgttt 31481888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 37400002 - 37400046
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||||||| |||| |||||||||||||  |||||||||||    
T  37400002 gatatactctatcaatttgaatgaatgaatataatttatttttat 37400046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 37714903 - 37714931
Alignment:
Q  125 atttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||||||||||||||||||||    
T  37714903 atttaaatgaatgaatatcgtttattttt 37714931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 44311732 - 44311688
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 49  Q
    |||||||||||||||||||  ||||| ||||||||||| ||||||    
T  44311732 ttttatcatattatttgtagacatttcgttgttgtatgctattaa 44311688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 107 - 147
Target Start/End: Complemental strand, 46821582 - 46821542
Alignment:
Q  107 atatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||||| |||||  |||||||||||||||||||||||    
T  46821582 atatgatatattctattaatttaaatgaatgaatatcgttt 46821542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 49148058 - 49148010
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttt 53  Q
    ||||||||||||| ||||  ||||||||| |||||||| ||||||||||    
T  49148058 ttttatcatattaattgttggcattttgtcgttgtatgctattaacttt 49148010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 2e-42; HSPs: 52)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 26825574 - 26825717
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| |||||| | |||||    
T  26825574 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtt 26825673  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  26825674 tgtatttgatatactctatcgatttgaatgaatgaatatcgttt 26825717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 24229731 - 24229585
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  |||||||| |||||| |||||| | ||    
T  24229731 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcactctttacgtttttagcgat 24229632  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| ||| |||| |||||||||||||| ||||||||||||||||||    
T  24229631 gtttatatctgatgtactctatcgatttgaatgaatgaatatcgttt 24229585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 13007373 - 13007516
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||   ||||||||||||||| |||||| | |||||    
T  13007373 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 13007472  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||    
T  13007473 tgtatttgatgtactctatcaatttgaatgaatgaatatcgttt 13007516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 34945537 - 34945680
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||||| || ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  34945537 gttttatcatattatttataggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 34945636  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| |||||| |||||||||||    
T  34945637 tgtatctgatgtactctatcgattttaatgaaagaatatcgttt 34945680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14726408 - 14726262
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||| ||| |||  |||||||||   |||||||| ||| |||| ||||||||||||||| ||||||   ||    
T  14726408 taggttttatcatattatttgtaggcattttgtcgttttataatattaacttggatgctgtgagtttgttcacagattcaccctttacgtttttagtgat 14726309  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| || ||||||||||| ||||||||||||||||||    
T  14726308 gtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttt 14726262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 9113669 - 9113526
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| |||||||   |||||||| |||||||||  ||| | ||| ||| |||  ||||||||||||||| |||||| | |||||    
T  9113669 gttttatcatattatttgtaggcatttttccgttgtatgctattaacttgggtgttctgagtttgttcgcagattcaccctttacgtttttagcgatgtt 9113570  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  9113569 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 9113526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 25980301 - 25980444
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| ||   ||||||||||||||| |||||| | |||||    
T  25980301 gttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgatgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 25980400  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    || || ||||||||||||||||||| ||||||||||||||||||    
T  25980401 tgcatctgatatactctatcgatttgaatgaatgaatatcgttt 25980444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 38597938 - 38598084
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  | ||||||||||||| |||||| | ||    
T  38597938 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcaaattcaccctttacgtttttagcgat 38598037  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| ||||||||| |||| |||||||||||| |||||    
T  38598038 gtttgtatctgatgtactctatcaatttgaatgaatgaataacgttt 38598084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 8096445 - 8096300
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||   || |||| |||||||||  ||| ||||| ||| |||  | |||||||||||||||||||| | ||    
T  8096445 taggttttatcatattatttgtaggcattttgccattttatgctattaacttgggtggtgtgagtttgttcgcaaattcaccctttacatttttagcgat 8096346  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| | || |||||||||||||| ||||||||||||||||||    
T  8096345 gtttgtatct-atgtactctatcgatttgaatgaatgaatatcgttt 8096300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 14082343 - 14082197
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||   || || || ||| |||  ||||||||||||||  |||||| | ||    
T  14082343 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttcgatgatgggagtttgttcgcagattcaccctttatgtttttagcgat 14082244  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| | |||||||||||| |||||||| |||||||||    
T  14082243 gtttgtatctgatgtgctctatcgatttgaatgaatggatatcgttt 14082197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 38007499 - 38007644
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||   || |||| |||||||||  ||||||||| ||| |||| | ||||||| ||||| |||||| | ||    
T  38007499 taggttttatcatattatttgtaggcattttgccttt-tatgctattaacttgggtgctgtgagtttgttcacatattcaccttttacgtttttagcgat 38007597  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| || ||||||||||| ||||||||||||||||||    
T  38007598 gtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttt 38007644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 6012082 - 6011939
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||| ||||||||||||||| ||||| |   ||| |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  6012082 gtttgatcatattatttgtaggcattctaccgttttatgctattaacttgggtgatgtgagtttgttcgcagattcaccctttacgtttttaacgatgtt 6011983  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  6011982 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 6011939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 10722906 - 10723048
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| |||||||   | ||||||||||||||||  ||| ||||| ||| ||| |||||||||| |||||||||||| | || |||    
T  10722906 ttttatcatattatttgtaggcatttttccgctgtatgttattaacttgagtgttgtgagtttgttcgtagattcaccatttacatttttagcgatattt 10723005  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| ||||| ||| |||| ||||||| ||||||||||    
T  10723006 gtatttgatgtactcgatcaatttgaatgaataaatatcgttt 10723048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 26878051 - 26877910
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||| ||||| ||||||| | ||||||||   || ||||| ||| |||  ||||||| ||||||| |||||| ||||||||    
T  26878051 ttttatcatattatttgtaggcactttgtcgttgtatct-attaacttggatgttgtgagtttgttcgcagattcatcctttacgtttttaccaatgttt 26877953  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||| ||||||||| |||  ||||||||||||||||||    
T  26877952 gtatatgatgtactctatcaattcgaatgaatgaatatcgttt 26877910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 11976882 - 11976740
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| |||||||   ||| ||||||||||||||   || ||||| ||| |||  ||||||| |||||||||||||| | ||    
T  11976882 taggttttatcatattatttgtaggcattttcccgttttatgttattaacttggatgttgtgagtttgttcgcagattcatcctttacatttttagcgat 11976783  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||||| || |||| || |||||| |||| ||||||| ||||||    
T  11976782 gtttgcatctgatgtaatctatcaattttaatgaattaatatc 11976740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 35850940 - 35851080
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||| | ||| ||||  ||| |||| |||||||||  |||||| |  ||| |||| | ||||||| ||||| |||||| | ||    
T  35850940 taggttttatcatattatttgcaggcactttgccgttttatgctattaacttgggtgctgag--tttgttcacaaattcaccttttacgtttttagcgat 35851037  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||||||| ||||||| ||||| ||||| ||||||||||||||    
T  35851038 gtttgtatctgatataatctattgatttgaatgaatgaatatc 35851080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 6 - 53
Target Start/End: Original strand, 11192525 - 11192572
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaacttt 53  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||    
T  11192525 tttatcgtattatttgtaagcattttgtcgttgtatgttattaacttt 11192572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 13422078 - 13422215
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||| |||| |||||||   ||| |||| |||||||||   || ||||| ||| |||  | ||||| ||||||| |||||| | ||||||    
T  13422078 ttttatcatattatatgtaggcatttttccgttttatgctattaacttggatgttgtgagtttgttcgcatattcatcctttacgtttttagcgatgttt 13422177  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||||||||| || |||||| |||| ||||||||||||||    
T  13422178 gtatatgatgta-tctatcaatttgaatgaatgaatatc 13422215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 1409647 - 1409787
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttg--tgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgt 106  Q
    ||||||||||||| |   ||||||  |||||| | ||||||||||||  || ||||| ||| |||||||||||| | ||||  |||||| | ||||||||    
T  1409647 atcatattatttgaagatattttgccgttgtacgctattaacttttggatggtgtgaatttattcatagattcagcttttatgtttttagcgatgtttgt 1409746  T
Q  107 atatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    || |||| ||||||| | |||| ||| ||||||||||||||    
T  1409747 atctgatgtactctaccaatttgaataaatgaatatcgttt 1409787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 53
Target Start/End: Complemental strand, 8514595 - 8514547
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttt 53  Q
    ||||||||||||||||||||  ||||||| |||||||||||||||||||    
T  8514595 ttttatcatattatttgtaaatattttgtcgttgtatgttattaacttt 8514547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 6217043 - 6217185
Alignment:
Q  5 ttttatcatattatttgtaagcatttt-gttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||||||| ||||||  ||  ||||||| |||||||||  ||||||||| ||| |||  ||||||||| ||| | ||||||   | |||    
T  6217043 ttttatcatattatttgtaggcatttaagtcattgtatgctattaacttgagtgctgtgagtttgttcgcagattcacc-tttgcgtttttagtgacgtt 6217141  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| ||||  ||| |||| |||| ||||||||||||||||||    
T  6217142 tgtatttgatgcactatatcaatttgaatgaatgaatatcgttt 6217185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 155
Target Start/End: Original strand, 11867794 - 11867949
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||| |||||||||||| |||||||||||||||||| |||||| ||  ||  |||||  || |||  |||||||  |||||  |||||||| | ||||    
T  11867794 ttttattatattatttgtaggcattttgttgttgtatgctattaatttgggtattgtgagcttgttcgcagattcattctttatgtttttatcgacgttt 11867893  T
Q  105 gtata-----tgatatactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    |||||     |||| ||||||||| |||| ||| |||||| ||||||| |||||||    
T  11867894 gtatatgatgtgatgtactctatcaatttgaataaatgaacatcgtttttttttat 11867949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 7151225 - 7151263
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  7151225 tactctatcgattttaatgaatgaatatcgtttattttt 7151263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 14211376 - 14211462
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| |||||||  ||||||||| |||||||||  ||| ||||| ||| |||  ||||||||||| ||| ||||||    
T  14211376 atcatattatttgtaggcatttttctgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgttttta 14211462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 39567419 - 39567505
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||  |||||||| |||||||||||||| |||  ||| ||||| ||| ||| |||||||||| | ||| ||||||    
T  39567419 atcatattatttgtagacattttgtcgttgtatgttattaccttgggtgttgtgagtttgttcgtagattcaccatatacgttttta 39567505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 41630647 - 41630720
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagatt 78  Q
    |||||||||||||||||||  |||||||| |||||||| |||||||||  ||| ||||| ||| |||| |||||    
T  41630647 ttttatcatattatttgtagacattttgtcgttgtatgctattaacttaggtgttgtgagtttgttcacagatt 41630720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Original strand, 6281469 - 6281513
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||||    
T  6281469 gatatactctatcaatttgaatgaatgaatatcgtttacttttat 6281513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7930318 - 7930358
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtat 41  Q
    ||||||||||||||||||||||| ||||||||| |||||||    
T  7930318 taggttttatcatattatttgtaggcattttgtcgttgtat 7930358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 15 - 95
Target Start/End: Original strand, 24874684 - 24874764
Alignment:
Q  15 ttatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||| |||||| | ||||| ||||||||||||||||||  ||| ||||| ||| |||| ||||||| ||||||| ||||||    
T  24874684 ttatatgtaagtaatttgtcgttgtatgttattaacttgggtgatgtgaatttgttcacagattcatcctttacgttttta 24874764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 42396206 - 42396162
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    |||||| |||||| |||| ||||||||||||||||||||||||||    
T  42396206 gatatattctatcaatttgaatgaatgaatatcgtttatttttat 42396162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 103 - 146
Target Start/End: Complemental strand, 8514488 - 8514445
Alignment:
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgtt 146  Q
    |||||| ||||||||||||||||||||||| ||| |||||||||    
T  8514488 ttgtatttgatatactctatcgatttaaataaataaatatcgtt 8514445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 143
Target Start/End: Complemental strand, 11073857 - 11073793
Alignment:
Q  77 ttcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||||| |||||||||| | | ||||||||||||||| ||||||||  |||| ||||||||||||||    
T  11073857 ttcaccatttacattttgagcgatgtttgtatatgatgtactctat--atttgaatgaatgaatatc 11073793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 31391700 - 31391649
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||||||| |||| |||||||  ||||||||| |||||||||    
T  31391700 taggttttatcatattatatgtaggcatttttctgttgtatgctattaactt 31391649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 42505110 - 42505067
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  42505110 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 42505067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 2979245 - 2979159
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||| ||  |||||||| |||||||||   || ||||| ||| |||  ||||||||||| ||||||||||    
T  2979245 atcatattatttgtaggcattgtgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacattttta 2979159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 9196723 - 9196685
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  9196723 tactctatcaatttgaatgaatgaatatcgtttattttt 9196685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 17331757 - 17331795
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  17331757 tactctatcaatttgaatgaatgaatatcgtttattttt 17331795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 23881808 - 23881770
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  23881808 tactctatcaatttgaatgaatgaatatcgtttattttt 23881770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 26294039 - 26294077
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  26294039 tactctatctatttgaatgaatgaatatcgtttattttt 26294077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 26294770 - 26294728
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||| |||||||||||| |||||||||||    
T  26294770 gatatactctatcaatttgaatgaatgaataccgtttattttt 26294728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 28540845 - 28540759
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||  ||||||   |||||||| |||||||||  ||||||||| ||| |||  ||||||||||| ||| ||||||    
T  28540845 atcatattatttgtagacatttttccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgttttta 28540759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 34431493 - 34431531
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  34431493 tactctatcaatttgaatgaatgaatatcgtttattttt 34431531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 38961573 - 38961619
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||| ||||||| || ||||||||||||| ||||||||||||||    
T  38961573 tttatcacattatttataggcattttgttgttttatgttattaactt 38961619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 39531100 - 39531062
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  39531100 tactctatcaatttgaatgaatgaatatcgtttattttt 39531062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 3740761 - 3740798
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  3740761 tactctatcaatttgaatgaatgaatatcgtttatttt 3740798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 6886884 - 6886847
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    ||||||||| ||||||||||||||||||| ||||||||    
T  6886884 tactctatcaatttaaatgaatgaatatcttttatttt 6886847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 4726709 - 4726657
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatat 167  Q
    ||||||||| |||| |||||||||||||| ||||||||| | | |||||||||    
T  4726709 tactctatcaatttgaatgaatgaatatcatttatttttgtcaaaaaaaatat 4726657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 113 - 153
Target Start/End: Original strand, 6639408 - 6639448
Alignment:
Q  113 tatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| | |||| ||||||||||||||||||||||||    
T  6639408 tatactctaccaatttgaatgaatgaatatcgtttattttt 6639448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 130 - 166
Target Start/End: Original strand, 13677529 - 13677565
Alignment:
Q  130 aatgaatgaatatcgtttatttttatgagaaaaaata 166  Q
    |||||||||||||||||||||||||| | ||||||||    
T  13677529 aatgaatgaatatcgtttatttttataaaaaaaaata 13677565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Original strand, 19121053 - 19121145
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 93  Q
    |||||||||||||||||||||||  | ||||| | ||||||| |||||| ||   || ||||| ||| |||  ||||||||||||||| ||||    
T  19121053 taggttttatcatattatttgtagacgttttgctcttgtatgatattaatttggatgatgtgagtttgttcgcagattcaccctttacgtttt 19121145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 109 - 153
Target Start/End: Complemental strand, 22978746 - 22978702
Alignment:
Q  109 atgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||| |||| ||||||||  ||||||||||||||||||||||||    
T  22978746 atgatgtactttatcgattagaatgaatgaatatcgtttattttt 22978702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 35920939 - 35920895
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 49  Q
    ||||||||||||||||||| |||||||||  ||||||| ||||||    
T  35920939 ttttatcatattatttgtaggcattttgtcattgtatgctattaa 35920895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 88; Significance: 2e-42; HSPs: 84)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 10229620 - 10229763
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| |||||| | |||||    
T  10229620 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtt 10229719  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| ||||||||||||||||||| ||||||||||||||||||    
T  10229720 tgtatttgatatactctatcgatttgaatgaatgaatatcgttt 10229763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 9998611 - 9998754
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| |||||| | |||||    
T  9998611 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtt 9998710  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  9998711 tgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 9998754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 10108380 - 10108523
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| |||||||||||||||| |||||| | |||||    
T  10108380 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccctttacgtttttagctatgtt 10108479  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  10108480 tgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 10108523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 10233214 - 10233357
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||| || ||||||||||||  |||||||| |||||    
T  10233214 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgtacattcaccctttatgtttttatctatgtt 10233313  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  10233314 tgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 10233357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 45568392 - 45568246
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||    
T  45568392 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttattcgcagattcaccctttacgtttttagcgat 45568293  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  45568292 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 45568246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 9797478 - 9797335
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| ||  || ||||||||||||| || ||| | |||||    
T  9797478 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgtttgtatattcaccctttacgttcttagcgatgtt 9797379  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||| ||||||||| ||||||||||||||||||    
T  9797378 tgtatctgatgtactatatcgatttgaatgaatgaatatcgttt 9797335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 48650678 - 48650539
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  |||||||||||||||||||||| | || ||    
T  48650678 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacatttttagcgatatt 48650579  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||||| |||| |||||||||||||| ||||||||||||||    
T  48650578 tgtatctgatgtactctatcgatttgaatgaatgaatatc 48650539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 52923061 - 52922918
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| |||||||   |||||||| |||||||||   |||||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  52923061 gttttatcatattatttgtaggcattttaccgttgtatgctattaacttggctgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 52922962  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  52922961 tgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 52922918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 21313181 - 21313323
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||||||  |||||||  |||||||| |||||||||  ||||||||| ||| |||  |||||||||||||||||||||| |  |||||    
T  21313181 ttttatcatattatttgtagccattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacatttttagcggtgttt 21313280  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||||||||| ||| |||| ||||||||||||||||||    
T  21313281 gtatctgatatactcaatcaatttgaatgaatgaatatcgttt 21313323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 21533756 - 21533614
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||| ||| ||||| |||||| | ||    
T  21533756 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagatttaccttttacgtttttagcgat 21533657  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||||||| |||| |||||||||||||| ||||||||||||||    
T  21533656 gtttgtatctgatgtactctatcgatttgaatgaatgaatatc 21533614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 40487466 - 40487612
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||  ||| ||||| ||| |||  | |||||| |||||  |||||| | ||    
T  40487466 taggttttatcatattatttgtaggcattttgccgttatatgttattaacttgggtgttgtgagtttgttcgcaaattcactctttatgtttttagcgat 40487565  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||||    
T  40487566 gtttgtatctgatatactctatcgatttgaatgaatgaatatcgttt 40487612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 43017029 - 43017175
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||| ||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||| | ||||| ||||||| |||||| | ||    
T  43017029 taggtgttatcatattatttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttattcacatattcatcctttacgtttttagcgat 43017128  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  43017129 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 43017175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 6954640 - 6954497
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||| |||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||   ||||||||||||||| |||||| | |||||    
T  6954640 gttttatcaaattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctttacgtttttagcgatgtt 6954541  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||  |||||||||||||| ||||||||||||||||||    
T  6954540 tgtatctgaagtactctatcgatttgaatgaatgaatatcgttt 6954497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 145
Target Start/End: Original strand, 33580021 - 33580165
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| ||||||   ||    
T  33580021 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgattttgttcgcagattcaccctttacgtttttagtgat 33580120  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgt 145  Q
    |||||||| |||| || ||||||||||| ||||||||||||||||    
T  33580121 gtttgtatttgatgtaatctatcgatttgaatgaatgaatatcgt 33580165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 5 - 153
Target Start/End: Original strand, 54149136 - 54149284
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||| ||| |||||||| ||||||| |  ||| ||||| ||  |||  || |||||||||||| |||||| | ||||||    
T  54149136 ttttatcatattatttgtaggcattatgtcgttgtatgctattaacctgggtgatgtgagttagttcgcaggttcaccctttacgtttttagcgatgttt 54149235  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||| |||| |||||||||||||| ||||||||||||||||||| ||||    
T  54149236 gtatctgatgtactctatcgatttgaatgaatgaatatcgtttaatttt 54149284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12050595 - 12050449
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||   |  ||||| ||| |||  | ||||||||||||||||||||   ||    
T  12050595 taggttttatcatattatttgtaagcattttgtcgttgtatgttattaacttgaatagtgtgagtttgttcgcaaattcaccctttacatttttagagat 12050496  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||   || ||| |||| ||||||||||||||||||||||||    
T  12050495 gtttatattcaatgtaccctattgatttaaatgaatgaatatcgttt 12050449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 46304467 - 46304322
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||| |||| |||| |||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||    
T  46304467 taggttttatcatattatatgtaggcatgttgccgttgtatgctattaacttgagtgttgtgagtttgttcgcagattcaccctttacgtttttagc-at 46304369  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| ||||||||| |||| ||||||||||||||||||    
T  46304368 gtttgtatctgatgtactctatcaatttgaatgaatgaatatcgttt 46304322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 21431757 - 21431902
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaa--tg 101  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  |||||||||  || |||  ||||||||| ||||| |||||| | |  ||    
T  21431757 gttttatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgctgtgagattgttcgcagattcaccatttacgtttttagcgatgtg 21431856  T
Q  102 tttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||| |||| |||||||||||||| ||||||||||| ||||||    
T  21431857 tttgtatctgatgtactctatcgatttgaatgaatgaatgtcgttt 21431902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 141
Target Start/End: Complemental strand, 44959917 - 44959780
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||   ||||||| |||||||||   |||||||| ||| ||   ||||||||||||||| |||||| | |||||    
T  44959917 gttttatcatattatttgtaggcattttgccattgtatgctattaacttggatgctgtgagtttatttgcagattcaccctttacgtttttagcgatgtt 44959818  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaata 141  Q
    ||||| |||| || ||||||||||| ||||||||||||    
T  44959817 tgtatctgatgtattctatcgatttgaatgaatgaata 44959780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 40556846 - 40556989
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||  ||||  ||| ||||| ||| |||  ||||||||||||||  |||||| | |||||    
T  40556846 gttttatcatattatttgtaggcattttgccgttgtatgctatgcacttgggtgttgtgagtttgttcgcagattcaccctttatgtttttagcgatgtt 40556945  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||| | ||||||| ||||||||||||||||||    
T  40556946 tgtatttgatgtactatgtcgatttgaatgaatgaatatcgttt 40556989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 38545940 - 38546086
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| || || ||| |||  ||||||||||||||| ||||||   ||    
T  38545940 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtggtgggagtttgttcccagattcaccctttacgtttttagtgat 38546039  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||  || ||||||||||| ||||||| ||||||||||    
T  38546040 gtttgtatctgaggtaatctatcgatttgaatgaataaatatcgttt 38546086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 47896293 - 47896438
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||| ||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| ||| ||||||| |||||||  ||||||   ||    
T  47896293 taggttttatcttattatttgta-gcattttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgtagattctccctttaagtttttagggat 47896391  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| | || ||||||||| |||| ||| ||||||||||||||    
T  47896392 gtttgtatttaatgtactctatcaatttgaatcaatgaatatcgttt 47896438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 7448858 - 7448710
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||| |||||||||||||||  |||||||  | |||||| |||||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||||| |||||    
T  7448858 gtttcatcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgtttttatcgatgtt 7448759  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    | ||| || | ||||||||| |||| |||||||||||||||||| ||||    
T  7448758 tatatctgttgtactctatcaatttgaatgaatgaatatcgtttgtttt 7448710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 4 - 152
Target Start/End: Complemental strand, 7457000 - 7456852
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||| |||||||||||||||  |||||||  | |||||| |||||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||||| |||||    
T  7457000 gtttcatcatattatttgtagacattttgccgctgtatgctattaacttaggtgatgtgagtttgttcgcagattcaccatttacgtttttatcgatgtt 7456901  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    | ||| || | ||||||||| |||| |||||||||||||||||| ||||    
T  7456900 tatatctgttgtactctatcaatttgaatgaatgaatatcgtttgtttt 7456852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 4711626 - 4711769
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| ||   ||||||| ||||||  ||||||   |||||    
T  4711626 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgtttgcagattcatcctttatgtttttagtgatgtt 4711725  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| ||||||||||||||   ||||||||||||||||    
T  4711726 tgtatctgatgtactctatcgatttggttgaatgaatatcgttt 4711769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 5 - 92
Target Start/End: Original strand, 42460894 - 42460981
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattt 92  Q
    ||||||||||||||||||| |||||||||||||||||| |||||||||  || |||||| ||| |||  |||||||||||||||||||    
T  42460894 ttttatcatattatttgtaggcattttgttgttgtatgctattaacttgggtactgtgagtttgttcgcagattcaccctttacattt 42460981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 43488537 - 43488392
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||| || || |||||  |||||||| |||||| ||  ||||||||| ||| |||  ||||||| | ||||| |||| | | ||    
T  43488537 taggttttatcatattatttttaggctttttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcatcatttacgtttt-agcgat 43488439  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| | || |||||||||||||| ||||||||||||||||||    
T  43488438 gtttgtatctaatgtactctatcgatttgaatgaatgaatatcgttt 43488392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 47041995 - 47041853
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||| ||||||||||||||| || |||| | ||| |||| |||||||||  ||| | ||| ||| |||  ||||||||| ||||| |||||| ||||    
T  47041995 taggtttcatcatattatttgtaggcgttttatcgttttatgctattaacttaggtgatatgagtttgttcgcagattcaccttttacgtttttagcaat 47041896  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||||||| |||| || |||||| |||| ||||||||||||||    
T  47041895 gtttgtatctgatgtaatctatctatttgaatgaatgaatatc 47041853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 36461378 - 36461238
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||||||  ||||||||      ||| |||||||||  ||||||||| ||| ||   |||||||||||||||||||||| | ||    
T  36461378 taggttttatcatattatttgtagccattttgt------atgctattaacttgagtgctgtgagtttgttagcagattcaccctttacatttttagcgat 36461285  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| | || ||||||||| |||| ||||||| ||||| ||||    
T  36461284 gtttgtatctaatgtactctatcaatttgaatgaattaatattgttt 36461238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 37040918 - 37041055
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtat 108  Q
    ||||||||| ||||| |||||||||  || ||||||||||||||  ||||||||| ||| |||  || || ||||||||| ||| || | || |||||||    
T  37040918 atcatattagttgta-gcattttgtcattttatgttattaacttgggtgctgtgagtttgttcgcagttttaccctttacgtttctagcgatttttgtat 37041016  T
Q  109 atgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
     |||| ||||||||| || | ||||||||||||||||||    
T  37041017 ctgatgtactctatcaatctgaatgaatgaatatcgttt 37041055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 41818360 - 41818450
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||| ||||||||||| |||||||||||||| ||| ||||||| || ||| ||||| ||| ||| ||| ||||||||||| |||||||    
T  41818360 ttttatcgtattatttgtaggcattttgttgttgcatgctattaacattggtgatgtgagtttgttcgtagtttcaccctttatattttta 41818450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 33 - 165
Target Start/End: Complemental strand, 31271747 - 31271614
Alignment:
Q  33 ttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaat 132  Q
    |||||||||| || ||||||  ||| ||||| ||| ||   ||||||||||||||| |||||| | || ||||||| |||| | ||||||| ||||||||    
T  31271747 ttgttgtatgctaataacttaggtgttgtgagtttgtttgcagattcaccctttacgtttttagcgatatttgtatctgatgttctctatcaatttaaat 31271648  T
Q  133 gaatgaatatcg-tttatttttatgagaaaaaat 165  Q
    |||||||||| | ||||||||||| | |||||||    
T  31271647 gaatgaatattgttttatttttatcaaaaaaaat 31271614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 147
Target Start/End: Complemental strand, 36910640 - 36910567
Alignment:
Q  74 agattcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||||||||| |||||  | |||||| ||| |||| |||||||||||||| ||||||||||||||||||    
T  36910640 agattcaccctttacgttttttgcgatgtttatatctgatgtactctatcgatttgaatgaatgaatatcgttt 36910567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 4 - 128
Target Start/End: Original strand, 32701635 - 32701759
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||| ||||||| |||| ||||||||  |||||||| ||| |||||   |||||||| ||| |||  ||||||||| |||| ||||||| | |||||    
T  32701635 gttttatgatattatctgtaggcattttgccgttgtatgctatgaacttggatgctgtgagtttgttcgcagattcaccttttatatttttagcgatgtt 32701734  T
Q  104 tgtatatgatatactctatcgattt 128  Q
    ||||| |||| || |||||||||||    
T  32701735 tgtatctgatgtattctatcgattt 32701759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 21289753 - 21289667
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||| ||| ||||||    
T  21289753 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctatacgttttta 21289667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 135
Target Start/End: Complemental strand, 26275762 - 26275632
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| |||||||||  ||||||| |||||||||| | ||| | | ||| |||  | ||||||| |||| ||||||| |  |||||    
T  26275762 ttttatcatattatttgtaggcattttgtcattgtatgctattaactttggcgctttaagtttattcgcaaattcaccatttatatttttaacgttgttt 26275663  T
Q  105 gtatatgatatactctatcgatttaaatgaa 135  Q
    |||| | ||||||||  || |||||||||||    
T  26275662 gtatctaatatactcattcaatttaaatgaa 26275632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 147
Target Start/End: Original strand, 35175553 - 35175690
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtat 108  Q
    |||||||| |||||| |||||||||  ||||||| |||||||||  ||| ||||| ||| |||  ||||||| | ||||| |||||| | |||||  | |    
T  35175553 atcatattgtttgtaggcattttgtcattgtatgctattaacttgagtgttgtgagtttgttcgcagattcatcttttacgtttttagcgatgttgat-t 35175651  T
Q  109 atgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| || |||||| |||| ||||||||||||||||||    
T  35175652 atgatgtattctatcaatttgaatgaatgaatatcgttt 35175690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 3457351 - 3457400
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    ||||||||| ||||||||||||||||||||||||||||||| | ||||||    
T  3457351 tactctatcaatttaaatgaatgaatatcgtttatttttataaaaaaaaa 3457400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Original strand, 38142672 - 38142760
Alignment:
Q  7 ttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||| ||||||| |||||||||  |||||||||   |||||||| ||| ||   | ||||||||||||||||||||    
T  38142672 ttatcatattatttgtaggcattttattgttgtatactattaacttgaatgctgtgagtttgtttgcatattcaccctttacattttta 38142760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 19339320 - 19339367
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||| |||| ||||||||| ||||||||||||||||||    
T  19339320 ttttatcatattatctgtaggcattttgtcgttgtatgttattaactt 19339367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 20464913 - 20464770
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||  ||||||||| || ||||| ||||||||| |||| | ||| ||| |||  |||||  | |||||| |||||| | ||||||    
T  20464913 ttttatcatattatttgtgtgcattttgtcgtcgtatgctattaacttgtgtgatatgagtttgttcgcagatttgctctttacgtttttagcgatgttt 20464814  T
Q  105 gt-----atatgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||     || |||| ||||||||| |||| ||||||||||||||    
T  20464813 gtatctgatctgatgtactctatcaatttgaatgaatgaatatc 20464770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 23799853 - 23799806
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  23799853 ttttatcatattatttgtaggcattttgccgttgtatgttattaactt 23799806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 26739300 - 26739253
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||||||||||||  |||||||| |||||||||    
T  26739300 ttttatcatattatttgtaagcattttggcgttgtatgctattaactt 26739253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 38860059 - 38860008
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||||||    
T  38860059 taggttttatcatattatttgtaggcattttgccgttgtatgctattaactt 38860008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 53807798 - 53807711
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||| ||||||| ||||||    
T  53807798 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtggtgtgagtttgttcgcagattcatcctttacgttttta 53807711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 27706165 - 27706079
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||  ||||||| | ||| |||  |||||| |||| ||| ||||||    
T  27706165 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgctgttagtttgttcccagattcgccctatacgttttta 27706079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 53155130 - 53155092
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  53155130 tactctatcaatttaaatgaatgaatatcgtttattttt 53155092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 2192507 - 2192556
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    ||||||||| |||| |||||||||||||||||||||||||| | ||||||    
T  2192507 tactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaaaa 2192556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 153
Target Start/End: Complemental strand, 44984568 - 44984527
Alignment:
Q  112 atatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||| ||||||||||||| |||||||||||||||    
T  44984568 atatactctatcaatttaaatgaatggatatcgtttattttt 44984527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 45664629 - 45664678
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    ||||||||| ||||||||||||||||||| ||||||||||| | ||||||    
T  45664629 tactctatcaatttaaatgaatgaatatcatttatttttatcaaaaaaaa 45664678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 46732451 - 46732414
Alignment:
Q  116 actctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||| |||||||||||||||||||||||||||||    
T  46732451 actctatcaatttaaatgaatgaatatcgtttattttt 46732414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Complemental strand, 55090399 - 55090350
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    ||||||||| |||| |||||||||||||||||||||||| ||| ||||||    
T  55090399 tactctatcaatttgaatgaatgaatatcgtttatttttgtgaaaaaaaa 55090350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 9 - 85
Target Start/End: Original strand, 7546764 - 7546840
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctt 85  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| ||   ||||||||||||    
T  7546764 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcagattcaccctt 7546840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 36691499 - 36691459
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    |||| ||||||||| ||||||||||||||||||||||||||    
T  36691499 tactttatcgatttgaatgaatgaatatcgtttatttttat 36691459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 164
Target Start/End: Original strand, 37452121 - 37452165
Alignment:
Q  120 tatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    |||| ||||||||||||||||||||||||||||||| | ||||||    
T  37452121 tatcaatttaaatgaatgaatatcgtttatttttatcaaaaaaaa 37452165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 51060084 - 51060124
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    |||||||||||||||||||||| || |||||||||||||||    
T  51060084 tactctatcgatttaaatgaataaacatcgtttatttttat 51060124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 52115961 - 52115917
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||    
T  52115961 tatcatattatttgtagtcattttgttgttatatgttattaactt 52115917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 628863 - 628776
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||| ||||||||  |||||||  |||||||||  ||| ||||| ||| |||  ||||||| ||||||| ||||||    
T  628863 tatcatattatttgtaggcattttgccgttgtattctattaacttgggtgttgtgagtttgttcgcagattcatcctttacgttttta 628776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 9 - 52
Target Start/End: Original strand, 9173897 - 9173940
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||    
T  9173897 atcatattatttgtaggcattttgccgttgtatgttattaactt 9173940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 14585886 - 14585929
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  14585886 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 14585929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Original strand, 19645614 - 19645657
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  19645614 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 19645657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 20987698 - 20987651
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||| ||||||||  |||||||| |||||||||    
T  20987698 ttttatcatattatttgtaggcattttgcagttgtatgctattaactt 20987651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 166
Target Start/End: Original strand, 45047922 - 45047977
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaata 166  Q
    ||||||||||||| |||| |||||||||||||| ||||||||| | | ||||||||    
T  45047922 gatatactctatcaatttgaatgaatgaatatcatttatttttgtcaaaaaaaata 45047977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 50981171 - 50981128
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  50981171 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 50981128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 153
Target Start/End: Complemental strand, 51084305 - 51084262
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||    
T  51084305 tgatgtactctatcaatttgaatgaatgaatatcgtttattttt 51084262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 53099935 - 53099981
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||||||    
T  53099935 ttttagcatattatttgta-gcattttgtcgttgtatgttattaactt 53099981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 8914861 - 8914947
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||| | ||| ||||||    
T  8914861 atcatattatttgtaggcattttgccgttgtatgctattaacttgagtgatgtgagtttgttcgcagattcaccttatacgttttta 8914947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 11819513 - 11819551
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  11819513 tactctatcaatttgaatgaatgaatatcgtttattttt 11819551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 13701702 - 13701664
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13701702 tactctatcaatttgaatgaatgaatatcgtttattttt 13701664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Original strand, 19619858 - 19619904
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaact 51  Q
    ||||||||||||||||||| ||||||||  |||||||| ||||||||    
T  19619858 ttttatcatattatttgtaggcattttgccgttgtatgctattaact 19619904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 24483396 - 24483358
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  24483396 tactctatcaatttgaatgaatgaatatcgtttattttt 24483358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 34960626 - 34960580
Alignment:
Q  118 tctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    |||||| |||| |||||||||||||||||||||||||| | ||||||    
T  34960626 tctatcaatttgaatgaatgaatatcgtttatttttataaaaaaaaa 34960580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 40012976 - 40012934
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||| ||||||| ||||||||||||||||    
T  40012976 gatatactctatcaatttgaatgaataaatatcgtttattttt 40012934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 171
Target Start/End: Original strand, 42106562 - 42106608
Alignment:
Q  125 atttaaatgaatgaatatcgtttatttttatgagaaaaaatatatat 171  Q
    |||| |||||||||||||| ||||||||||| | |||||||||||||    
T  42106562 atttgaatgaatgaatatcatttatttttatcaaaaaaaatatatat 42106608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 135
Target Start/End: Complemental strand, 42455759 - 42455633
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtat 108  Q
    ||||||||| |||||  |||||||| |||||||| |||||||||   || ||||| ||| |||  ||||| ||| ||||| ||| ||   ||||||||||    
T  42455759 atcatattagttgtagtcattttgtcgttgtatgctattaacttcgatgttgtgagtttgttcgcagatttaccatttacgtttgtaatgatgtttgtat 42455660  T
Q  109 atgatatactctatcgatttaaatgaa 135  Q
     || ||||||||||| |||| ||||||    
T  42455659 ctgctatactctatcaatttgaatgaa 42455633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 48401521 - 48401559
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  48401521 tactctatcaatttgaatgaatgaatatcgtttattttt 48401559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 49627804 - 49627766
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  49627804 tactctatcaatttgaatgaatgaatatcgtttattttt 49627766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 51303582 - 51303496
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||| | ||| ||||||    
T  51303582 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccatatacgttttta 51303496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 54706432 - 54706394
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  54706432 tactctatcaatttgaatgaatgaatatcgtttattttt 54706394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 55455291 - 55455329
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  55455291 tactctatcaatttgaatgaatgaatatcgtttattttt 55455329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Complemental strand, 1074594 - 1074557
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  1074594 tactctatcaatttgaatgaatgaatatcgtttatttt 1074557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 26716050 - 26716014
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtat 41  Q
    ||||||||||||||||||||||||||| | |||||||    
T  26716050 ttttatcatattatttgtaagcattttttcgttgtat 26716014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 31550349 - 31550377
Alignment:
Q  125 atttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||||||||||||||||||||    
T  31550349 atttaaatgaatgaatatcgtttattttt 31550377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 171
Target Start/End: Original strand, 33637823 - 33637879
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatatat 171  Q
    |||| |||| |||| |||||||||||||||||||||||| | | |||||| ||||||    
T  33637823 tactttatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaaaatatat 33637879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 84; Significance: 5e-40; HSPs: 70)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17949271 - 17949124
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacat-ttttatcaa 99  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||  ||| ||||| ||| |||  ||||||||||||||||| ||||| | |    
T  17949271 taggttttatcatattatatgtatgcattttgttcttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacattttttagcga 17949172  T
Q  100 tgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  17949171 tgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttt 17949124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 17953123 - 17952976
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacat-ttttatcaa 99  Q
    |||||||||||||||||| |||| |||||||||| |||||||||||||||||  ||| ||||| ||| |||  ||||||||||||||||| ||||| | |    
T  17953123 taggttttatcatattatatgtatgcattttgttcttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctttacattttttagcga 17953024  T
Q  100 tgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||| ||||||||||||||||||| ||||||||||||||||||    
T  17953023 tgtttgtatctgatatactctatcgatttgaatgaatgaatatcgttt 17952976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 56040593 - 56040447
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||   |||||||| |||  ||  ||||||||||||||| |||||| | ||    
T  56040593 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttggatgctgtgagtttgctcgcagattcaccctttacgtttttagcgat 56040494  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  56040493 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 56040447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 43510361 - 43510504
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||| ||||||||| ||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | || ||    
T  43510361 gttttatcatattatttgtaggcattttgtcgttgtatgtcattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatatt 43510460  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||| ||||||||| ||||||||||||||||||    
T  43510461 tgtatttgatgtactttatcgatttgaatgaatgaatatcgttt 43510504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 21686189 - 21686043
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  | ||||||||||||||||  ||||||||| ||| |||  | ||||||||||||| ||| || | ||    
T  21686189 taggttttatcatattatttgtaggcattttgccgctgtatgttattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttgtagcgat 21686090  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  21686089 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 21686043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 19853456 - 19853313
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||||| || ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  19853456 gttttatcatattatttctaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttaacgatgtt 19853357  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  19853356 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 19853313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 32766679 - 32766822
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||| ||| |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||| | |||||| | |||||    
T  32766679 gttttatcatattatttgtaggcattatgtcgttgtatgctattaacttgggtgctgtgagtttgttctcagattcaccctttgcgtttttagcgatgtt 32766778  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||| ||||    
T  32766779 tgtatctgatgtactctatcgatttgaatgaatgaatattgttt 32766822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 4 - 153
Target Start/End: Complemental strand, 48257576 - 48257427
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| | ||||||  |||||||| |||||||||   |  ||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  48257576 gttttatcatattatttgtaggtattttgccgttgtatgctattaacttggattttgtgagtttgttcgcagattcaccctttacgtttttaacgatgtt 48257477  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||||||||    
T  48257476 tgtatctgatgtactctatcgatttgaatgaatgaatatcgtttattttt 48257427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 2520945 - 2521087
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||| ||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||||||    
T  2520945 ttttatcgtattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgttt 2521044  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| ||||  ||||||||||||| ||||||||||||||||||    
T  2521045 gtatctgatggactctatcgatttgaatgaatgaatatcgttt 2521087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 24099014 - 24098871
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||| ||| |||||||||  ||||||||| ||| |||  |||| ||| |||||| |||||| ||||    
T  24099014 taggttttatcatattatttgtaggcattttgccgttg-atgctattaacttg-gtgctgtgagtttgttcgcagatccactctttacgtttttagcaat 24098917  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgtt 146  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||    
T  24098916 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgtt 24098871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 10496497 - 10496644
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttt-acatttttatcaa 99  Q
    ||||||||||||||||||||||| |||||||| ||| ||||| |||||||||  ||||| ||| ||| |||  ||||||| ||||| || |||||| | |    
T  10496497 taggttttatcatattatttgtaggcattttgctgtcgtatgctattaacttgggtgctttgagtttgttcgcagattcatcctttaacgtttttagcga 10496596  T
Q  100 tgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    | ||||||| |||||||||||||| |||| ||||||||||||||||||    
T  10496597 tatttgtatttgatatactctatcaatttgaatgaatgaatatcgttt 10496644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 13634277 - 13634419
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||| |||||||||||   ||||||  |||||||| |||||||||  ||||||||| ||| |||  |||||||||||||||  ||||| | ||    
T  13634277 taggttttatcttattatttgtagttattttgccgttgtatgctattaacttgggtgctgtgaatttgttcggagattcaccctttacgcttttagcgat 13634376  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||||||| |||| |||||||||||||| ||||||||||||||    
T  13634377 gtttgtatctgatgtactctatcgatttgaatgaatgaatatc 13634419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 4142656 - 4142565
Alignment:
Q  56 tgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| ||| |||  |||||||||||||||||||||| |||||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  4142656 tgctgtgagtttgttcgcagattcaccctttacatttttagcaatgtttgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 4142565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 22611348 - 22611498
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatc------ 97  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||| ||  ||||||||| ||| |||  ||||||||||||||| |||||| |          
T  22611348 gttttatcatattatttgtaggcattttgccgttgtatggtattaaattgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgtttaa 22611447  T
Q  98 -aatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
      |||||||||| |||| |||||||||||||||||||||| ||||||||||    
T  22611448 tgatgtttgtatctgatgtactctatcgatttaaatgaataaatatcgttt 22611498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 10258839 - 10258709
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||||||  ||||||| |||||||||     |||||| ||| ||||| ||| |||||||||| | ||||||| |||||| ||||||||    
T  10258839 ttttatcatattatttgtagacattttgctgttgtatg-----aactttagtgttgtgagtttgttcatagatttatcctttacgtttttagcaatgttt 10258745  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaat 140  Q
    |||| |||| ||||||||| |||| |||||||||||    
T  10258744 gtatctgatgtactctatcaatttgaatgaatgaat 10258709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 26633618 - 26633472
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||  | || |||||||   |||||||| ||||| |||   || ||||| ||| |||  ||||||||||||||| ||||||   ||    
T  26633618 taggttttatcatattaaatataggcattttaccgttgtatgctattagcttagatgttgtgagtttgttcgcagattcaccctttacgtttttagtgat 26633519  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  26633518 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 26633472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 35348469 - 35348617
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||   || |||| |||||||||  ||| ||||| ||| ||   ||||||||||||||| |||||| | ||    
T  35348469 taggttttatcatattatttgtaggcattttgccattttatgctattaacttgggtgttgtgagtttgtttgcagattcaccctttacgtttttagcgat 35348568  T
Q  101 gtttgtatatgatatactc--tatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||  |||||||||   ||||||||||||||||    
T  35348569 gtttgtatctgatgtactctttatcgatttggttgaatgaatatcgttt 35348617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 7 - 87
Target Start/End: Original strand, 22806704 - 22806784
Alignment:
Q  7 ttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||   |||| ||| ||| ||| ||||||||| |||||    
T  22806704 ttatcatattatttgtaagcattttgttgttgtatgttattaacttggatgctatgaatttgttcgtagattcactcttta 22806784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 140
Target Start/End: Complemental strand, 29960892 - 29960757
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||| |||||||| ||||||||  |||||||| | |||||||  ||||||||| ||| |||  ||||||||| ||||  |||||| | || |||    
T  29960892 ttttatcatactatttgtaggcattttgccgttgtatgcttttaacttgggtgctgtgagtttgttcgcagattcaccttttatgtttttagcgatattt 29960793  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaat 140  Q
    |||| | |||||||| |||||||| |||||||||||    
T  29960792 gtatctaatatactccatcgatttgaatgaatgaat 29960757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21662599 - 21662745
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||||||  || |||| ||||||||| |||||||||  ||| |||||  || |||  || |||||| ||||  |||||| | ||    
T  21662599 taggttttatcatattatttgtagacactttggtgttgtatgctattaacttgagtgttgtgaggttgttcgcagtttcaccatttatgtttttagcgat 21662698  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||  ||| ||||||| ||||||||||    
T  21662699 gtttgtatttgatgtactctatcactttgaatgaataaatatcgttt 21662745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21671363 - 21671509
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||||||  || |||| ||||||||| |||||||||  ||| |||||  || |||  || |||||| ||||  |||||| | ||    
T  21671363 taggttttatcatattatttgtagacactttggtgttgtatgctattaacttgagtgttgtgaggttgttcgcagtttcaccatttatgtttttagcgat 21671462  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||  ||| ||||||| ||||||||||    
T  21671463 gtttgtatttgatgtactctatcactttgaatgaataaatatcgttt 21671509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 43853609 - 43853699
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||   || ||||| ||| |||  ||||| ||| ||||||||||||    
T  43853609 ttttatcatattatttgtcagcattttgttgttgtatgttattaacttggatgttgtgagtttgttcgcagattaaccatttacattttta 43853699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 53811193 - 53811326
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| |||||  || |||  ||||||||||||||| |||||| | ||||     
T  53811193 gttttatcatattatttgtaggcattttggcgttgtatgctattaacttgggtgttgtga-gttgttcgcagattcaccctttacgtttttagcgatgt- 53811290  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
            || |||||||||||||||||||||||||||||||||    
T  53811291 --------atgtactctatcgatttaaatgaatgaatatcgttt 53811326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 36161877 - 36161967
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||||| |||||| || ||| ||||||||||||||  ||| ||||| ||| |||| |||||||| |||||| ||||||    
T  36161877 ttttatcatattatttgtaggcatttggtcgttatatgttattaacttgggtgttgtgagtttgttcacagattcactctttacgttttta 36161967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 142
Target Start/End: Original strand, 53444280 - 53444422
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||||||   |||||   ||| |||| |||||||||  ||||||||| ||| ||| |||||||||| ||||| |||||| | ||    
T  53444280 taggttttatcatattatttgtagatatttttccgttttatgctattaacttgggtgctgtgagtttgttcgtagattcaccttttacgtttttagcgat 53444379  T
Q  101 g-tttgtatatgatatactctatcgatttaaatgaatgaatat 142  Q
    | ||||||| | || || |||||| |||| |||||||||||||    
T  53444380 gttttgtatctaatgtaatctatctatttgaatgaatgaatat 53444422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 108
Target Start/End: Original strand, 9178517 - 9178622
Alignment:
Q  3 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 102  Q
    ||||||||||||||||||||| ||||||||| |||||||| ||||||||| ||||  |||| ||| |||  || |||||||||||  |||||| | ||||    
T  9178517 ggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgtgtgacgtgagtttgttcgcagtttcaccctttatgtttttaacgatgt 9178616  T
Q  103 ttgtat 108  Q
    | ||||    
T  9178617 tggtat 9178622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 37465648 - 37465695
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||||||||||||| |||||||| |||||||||    
T  37465648 ttttatcatattatttgtaagcattttgtcgttgtatgctattaactt 37465695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 9714076 - 9714166
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||||| |||||||||  ||||||||| |||||||  ||| ||||| ||| |||  || |||||||||||| ||||||    
T  9714076 ttttatcatattatttgtaggcattttgtcattgtatgttgttaacttgagtgttgtgagtttgttcgcaggttcaccctttacgttttta 9714166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 8 - 142
Target Start/End: Complemental strand, 47320352 - 47320219
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgta 107  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  |||||||  |||||| |||||| | ||  |||      
T  47320352 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcattctttacgtttttagcgat-cttgat 47320254  T
Q  108 tatgatatactctatcgatttaaatgaatgaatat 142  Q
    | |||| || ||||||||||| |||||||||||||    
T  47320253 tctgatgtattctatcgatttgaatgaatgaatat 47320219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 477713 - 477675
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||||| ||||||||||||||||||||||||    
T  477713 tactctatcgatttgaatgaatgaatatcgtttattttt 477675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 4 - 94
Target Start/End: Complemental strand, 11299954 - 11299864
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttt 94  Q
    |||||||||||||||| ||| ||||||||  ||| ||||||||||||||  ||| ||||| ||| |||  ||||||| ||||||| |||||    
T  11299954 gttttatcatattattcgtaggcattttggcgttttatgttattaacttgggtgttgtgagtttgttcgcagattcatcctttacgttttt 11299864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 18502534 - 18502496
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  18502534 tactctatcaatttaaatgaatgaatatcgtttattttt 18502496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 19745815 - 19745857
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  19745815 gatatactctatcaatttaaatgattgaatatcgtttattttt 19745857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 19793991 - 19793949
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||||||||| ||||||||||||||||||    
T  19793991 gatatactctatcaatttaaatgattgaatatcgtttattttt 19793949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 20887449 - 20887411
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  20887449 tactctatcaatttaaatgaatgaatatcgtttattttt 20887411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 123
Target Start/End: Complemental strand, 26090853 - 26090735
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||| |   || |||| |||||||| |||||| ||   |||||||| ||| || | ||||||| ||||||| |||||| |  |||||    
T  26090853 ttttatcatattatttgcagatatattgtcgttgtatgctattaatttggatgctgtgaatttgtttacagattcatcctttacgtttttagcgttgttt 26090754  T
Q  105 gtatatgatatactctatc 123  Q
    |||| ||||||||||||||    
T  26090753 gtatctgatatactctatc 26090735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 29120322 - 29120276
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaact 51  Q
    ||||||||||||||||||| ||||||||| |||||||| ||||||||    
T  29120322 ttttatcatattatttgtaggcattttgtcgttgtatgctattaact 29120276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 112 - 150
Target Start/End: Original strand, 39797380 - 39797418
Alignment:
Q  112 atatactctatcgatttaaatgaatgaatatcgtttatt 150  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  39797380 atatactctatcaatttaaatgaatgaatatcgtttatt 39797418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 44596826 - 44596967
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||||||   |||||   |||||||| |||||||||  ||||||||| ||| |||  ||||||  |||||| ||||||    ||||||    
T  44596826 ttttatcatattatttgtagctattttaccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattc-gcctttatattttttgtgatgttt 44596924  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| ||||||||| |||| ||| ||||||||| ||||    
T  44596925 gtatttgatgtactctatcaatttgaattaatgaatattgttt 44596967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 52933892 - 52933802
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||||| | |||||| | |||||||||||||||||  ||| ||||| ||| | |  ||||| || |||||||||||||    
T  52933892 ttttatcatattatttgtaggtattttgcttttgtatgttattaacttgagtgatgtgagtttgtgcgcagatttacgctttacattttta 52933802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 52978910 - 52979052
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||| ||||||||||||   |||||||  |||||| ||||||||||   || ||||| |||| ||  |||||||||||||   |||||| ||||||||    
T  52978910 ttttattatattatttgtagttattttgtcattgtattttattaacttggatggtgtgagttttgtcgcagattcaccctttttgtttttaacaatgttt 52979009  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
     ||| |||| ||||  ||| |||| |||||| |||||||||||    
T  52979010 atatctgatgtactagatcaatttgaatgaaagaatatcgttt 52979052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 115 - 164
Target Start/End: Original strand, 7060743 - 7060792
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaa 164  Q
    ||||||||| |||| |||||||||||||||||||||||||| | ||||||    
T  7060743 tactctatcaatttgaatgaatgaatatcgtttatttttatcaaaaaaaa 7060792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 164
Target Start/End: Original strand, 43095794 - 43095959
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||| ||||||| | ||||||| |||||||| |||||| ||   || ||||| ||| |||  ||||||| | ||||| ||||||   ||||||    
T  43095794 ttttatcatatcatttgtaggtattttgtagttgtatgctattaatttggatgatgtgagtttgttcgcagattcatcatttacgtttttagggatgttt 43095893  T
Q  105 gtatatgat-----atactctatcgatttaaatgaatgaatatcg-tttatttttatgagaaaaaa 164  Q
     ||| ||||     |||||||||| |||| ||||||||||||||| ||||||||||| | ||||||    
T  43095894 atatctgatgtgatatactctatcaatttgaatgaatgaatatcgttttatttttataaaaaaaaa 43095959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 45418678 - 45418723
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaac 50  Q
    ||||||||||||||||||| ||||||||| |||||||| |||||||    
T  45418678 ttttatcatattatttgtaggcattttgtcgttgtatgctattaac 45418723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 6155163 - 6155119
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||||| ||||||||| |||||||| |||||||||    
T  6155163 tatcatattatttgtaggcattttgtcgttgtatgctattaactt 6155119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 140
Target Start/End: Original strand, 54022026 - 54022165
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||||||  ||||| || ||||||||||||||||||   || | ||| ||| ||| ||||||||   ||||| |||||| | ||||||    
T  54022026 ttttatcatattatttgtagacattt-gtcgttgtatgttattaacttgaatgttatgaatttgttcgtagattcattatttacgtttttagcgatgttt 54022124  T
Q  105 gt-----atatgatatactctatcgatttaaatgaatgaat 140  Q
    ||     || |||| ||||||||| ||||||||||||||||    
T  54022125 gtatctgatttgatgtactctatcaatttaaatgaatgaat 54022165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Complemental strand, 22305564 - 22305517
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||| | ||||||| |||||||| |||||||||    
T  22305564 ttttatcatattatttgtaggtattttgtcgttgtatgctattaactt 22305517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 7084371 - 7084409
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  7084371 tactctatcaatttgaatgaatgaatatcgtttattttt 7084409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 8517151 - 8517113
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  8517151 tactctatcaatttgaatgaatgaatatcgtttattttt 8517113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Original strand, 12493459 - 12493541
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 87  Q
    |||| ||||||||||||||  ||||||||| || |||| |||||||||  ||||||||| ||| ||| || ||||| ||||||    
T  12493459 ttttctcatattatttgtagccattttgttattatatgctattaacttgcgtgctgtgagtttgttcgtatattcatccttta 12493541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 13965972 - 13966010
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13965972 tactctatcaatttgaatgaatgaatatcgtttattttt 13966010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 14346839 - 14346877
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  14346839 tactctatcaatttgaatgaatgaatatcgtttattttt 14346877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 24826068 - 24826106
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  24826068 tactctatcaatttgaatgaatgaatatcgtttattttt 24826106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 30416333 - 30416295
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  30416333 tactctatcaatttaaatgaatgaatatcatttattttt 30416295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Original strand, 37431581 - 37431623
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| ||||||| ||| |||||||||||||||||    
T  37431581 gatatactctatcaatttaaaagaaagaatatcgtttattttt 37431623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 38435006 - 38435044
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  38435006 tactctatcaatttgaatgaatgaatatcgtttattttt 38435044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Original strand, 39838018 - 39838060
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    |||||||||||| | |||| |||||||||||||||||||||||    
T  39838018 tgatatactctaacaatttgaatgaatgaatatcgtttatttt 39838060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 42197982 - 42198020
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  42197982 tactctatcaatttgaatgaatgaatatcgtttattttt 42198020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 43244073 - 43244035
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  43244073 tactctatcaatttgaatgaatgaatatcgtttattttt 43244035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 45350762 - 45350724
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  45350762 tactctatcaatttgaatgaatgaatatcgtttattttt 45350724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 45360241 - 45360203
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  45360241 tactctatcaatttgaatgaatgaatatcgtttattttt 45360203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 46268094 - 46268132
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  46268094 tactctatcaatttaaatgaataaatatcgtttattttt 46268132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 46990953 - 46990908
Alignment:
Q  109 atgatatactctatcgatttaaatgaatgaatatcgtttattttta 154  Q
    ||||| |||||||||||||| |||||||||||||| ||| ||||||    
T  46990953 atgatgtactctatcgatttgaatgaatgaatatcattttttttta 46990908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 116 - 153
Target Start/End: Complemental strand, 55600237 - 55600200
Alignment:
Q  116 actctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||| |||| ||||||||||||||||||||||||    
T  55600237 actctatcaatttgaatgaatgaatatcgtttattttt 55600200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 85
Target Start/End: Complemental strand, 7008932 - 7008852
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctt 85  Q
    ||||||||||||||||||   |||||||  |||||||| |||||||||  ||| ||||| ||  ||| |||||||||||||    
T  7008932 ttttatcatattatttgtggacattttgccgttgtatgctattaacttaggtgttgtgagttcgttcgtagattcaccctt 7008852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 9048830 - 9048918
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 93  Q
    ||||||||||||||||||| ||||||||| ||  | || ||| |||||  ||| ||||| ||| || | ||||||||||||||| ||||    
T  9048830 ttttatcatattatttgtaggcattttgtcgtcatgtgctataaacttgggtgttgtgagtttgtttacagattcaccctttacgtttt 9048918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 11210010 - 11209950
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 170  Q
    |||| ||||||||| |||| |||||||||||||| ||||||||| | | |||||| |||||    
T  11210010 tgatgtactctatcaatttgaatgaatgaatatcttttatttttgtaaaaaaaaagatata 11209950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 151
Target Start/End: Original strand, 31522375 - 31522411
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattt 151  Q
    ||||||||| |||| ||||||||||||||||||||||    
T  31522375 tactctatcaatttgaatgaatgaatatcgtttattt 31522411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 116 - 168
Target Start/End: Complemental strand, 36124048 - 36123996
Alignment:
Q  116 actctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatata 168  Q
    |||||||| |||| || ||||||||||||||||||||| | | ||||||||||    
T  36124048 actctatcaatttgaaagaatgaatatcgtttatttttgttaaaaaaaatata 36123996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 147
Target Start/End: Original strand, 37465748 - 37465792
Alignment:
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||| |||| || |||||| |||||||||||||||||||||||    
T  37465748 ttgtatctgatgtattctatcaatttaaatgaatgaatatcgttt 37465792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 84; Significance: 5e-40; HSPs: 78)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 38445321 - 38445464
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||   |||||||||||||||||| ||||||||| ||| |||  ||||||| ||||||| |||||| |||||||    
T  38445321 gttttatcatattatttgtaggcattttgccattgtatgttattaactttggtgctgtgagtttgttcgcagattcatcctttacgtttttaacaatgtt 38445420  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  38445421 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 38445464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 5427817 - 5427671
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||| ||||||||| | |||||||| |||||||||  ||||||||| ||| |||  |||||||||||||||  ||||| | ||    
T  5427817 taggttttatcatattatttgcaagcattttatcgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgcttttagcgat 5427718  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  5427717 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 5427671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 4778908 - 4779051
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||| ||  ||||||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  4778908 gttttatcatattatttgtaggcattttgccgttgtatgttattaatttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 4779007  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||| ||||    
T  4779008 tgtatttgatgtactctatcgatttgaatgaatgaatatagttt 4779051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 31788608 - 31788754
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||| ||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||  ||||||||||||||| |||||| | ||    
T  31788608 taggttttaacatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcaccctttacgtttttagcgat 31788707  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  31788708 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 31788754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 4904089 - 4903947
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||||||  |||||||| |||||||| |||||||||   || ||||| ||| ||| |||||||| ||||||| |||||| |||| |||    
T  4904089 ttttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgtgagtttgttcgtagattcagcctttacgtttttagcaatattt 4903990  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
     ||| |||| ||||||||| |||||||||||||||||||||||    
T  4903989 atatttgatgtactctatcaatttaaatgaatgaatatcgttt 4903947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 18763620 - 18763766
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||    
T  18763620 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgat 18763719  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
     ||||||| |||| |||||||| ||||| ||||||||||||||||||    
T  18763720 atttgtatctgatgtactctattgatttgaatgaatgaatatcgttt 18763766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 36692026 - 36692172
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||   || ||||| ||| |||| ||||||||||||||| || ||| | ||    
T  36692026 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttggttgttgtgagtttgttcacagattcaccctttacgttcttagcgat 36692125  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| |||||||| |||||||||    
T  36692126 gtttgtatctgatgtactctatcgatttgaatgaatgtatatcgttt 36692172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 11985181 - 11985029
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| |||||||| ||||||||  |||||||||   || ||||| ||| |||  | ||||| | ||||| |||||| | ||    
T  11985181 taggttttatcatattatttgtaggcattttgctgttgtatcctattaacttggatgttgtgaatttgttcgcaaattcatcatttacgtttttagcgat 11985082  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||| |||| |||||||||||||| |||||||||||||||||| |||||    
T  11985081 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttttttttt 11985029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 153
Target Start/End: Original strand, 1421828 - 1421979
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| ||   ||||||| ||||||| ||||||   ||    
T  1421828 taggttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgtttgcagattca-cctttacgtttttagtgat 1421926  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||| |||| |||| ||||||||| |||||||||||||| ||| |||||    
T  1421927 gtttgtatctgatgtactttatcgatttgaatgaatgaatatcattttttttt 1421979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 7646633 - 7646776
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||| | || ||    
T  7646633 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccttttacgtttttagcgatctt 7646732  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    | ||| |||| |||| ||||||||| ||||||||||||||||||    
T  7646733 tatatttgatgtactttatcgatttgaatgaatgaatatcgttt 7646776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 33585680 - 33585537
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  | ||||| ||||||| |||||| | |||||    
T  33585680 gttttatcatattatttgtatgcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcatcctttacgtttttaacgatgtt 33585581  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||| ||||| |||||| |||||||||||    
T  33585580 tgtatctgatgtactctattgatttgaatgaaagaatatcgttt 33585537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 4041542 - 4041400
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||| ||||||||||||||||||  ||||||| ||||| ||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||    
T  4041542 taggctttatcatattatttgtagccattttgctgttgcatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacgtttttaacgat 4041443  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
     ||||||| |||| ||| |||||||||| ||||||||||||||    
T  4041442 ttttgtatctgatgtacactatcgatttgaatgaatgaatatc 4041400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 25509012 - 25508870
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||| ||||||||||| ||||||||  ||||||||||||||||||  ||| ||||| ||| |||  ||||||| | ||||  |||||| | ||||||    
T  25509012 ttttatcgtattatttgtaggcattttgccgttgtatgttattaacttgggtgatgtgagtttgttcgcagattcatcgtttatgtttttaccgatgttt 25508913  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||| ||||||||| |||| ||||||| ||||||||||    
T  25508912 gtatatgatgtactctatcaatttgaatgaataaatatcgttt 25508870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 143
Target Start/End: Complemental strand, 29173653 - 29173523
Alignment:
Q  13 tattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatga 112  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||| ||||| ||| |||  ||||||| ||||||| |||||| | |||||||||| |||    
T  29173653 tattatttgtatgcattttgttgttgtatgttattaactttggtgttgtgagtttgttcgcagattcatcctttacgtttttagcgatgtttgtatctga 29173554  T
Q  113 tatactctatcgatttaaatgaatgaatatc 143  Q
    | || || ||| |||| ||||||| ||||||    
T  29173553 tgtaatcaatcaatttgaatgaataaatatc 29173523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 33923857 - 33924003
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||| | || |||||| ||| |||| |||||||||  ||||||||| ||| |||  | ||||||| ||||| |||||| | ||    
T  33923857 taggttttatcatattatttgcaggcgttttgtcgttttatgctattaacttgggtgctgtgagtttgttcgcatattcaccttttacctttttagcgat 33923956  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
     ||||||| |||| || ||||||||||| ||||||||||||||||||    
T  33923957 ttttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttt 33924003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 16 - 147
Target Start/End: Original strand, 35220495 - 35220626
Alignment:
Q  16 tatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatgatat 115  Q
    |||||||| ||||||||| |||||||| |||||||||  ||||||||| ||| |||  | ||||||||||||| |||||| | || ||||||| |||| |    
T  35220495 tatttgtaggcattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgatctttgtatctgatgt 35220594  T
Q  116 actctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| ||||||||||| ||||||    
T  35220595 actctatcaatttgaatgaatgaatgtcgttt 35220626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 7677821 - 7677675
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||| || ||||||||  |||||||| |||||||||  ||||||||| ||| ||   |  |||||| ||||| |||||| | ||    
T  7677821 taggttttatcatattatttttaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgtttgcaagttcaccttttacgtttttagcgat 7677722  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| ||| |||||||||||||| |||||||  ||||||||||||||    
T  7677721 gtttatatctgatatactctatcaatttaaaaaaatgaatatcgttt 7677675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 37876550 - 37876408
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||  || ||||| |||||||||  ||| || || ||| |||  ||||||||| ||||  |||||| | ||||||    
T  37876550 ttttatcatattatttgtaggcattttgccgtcgtatgctattaacttgggtgatgcgagtttgttcgcagattcaccatttatgtttttagcgatgttt 37876451  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| ||||||||| |||| ||||||||||||||||||    
T  37876450 gtatttgatgtactctatcaatttgaatgaatgaatatcgttt 37876408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 4100491 - 4100628
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| ||||||| || ||| ||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  4100491 gttttatcatattatttgtaggcattttgccgttgtatgatattaac-ttggtgttgtgagtttgttcgcagattcaccctttacgtttttagcgatgtt 4100589  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||     || || ||||||||||| ||||||||||||||||||    
T  4100590 tgt-----atgtaatctatcgatttgaatgaatgaatatcgttt 4100628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 147
Target Start/End: Complemental strand, 19062279 - 19062150
Alignment:
Q  17 atttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatgatata 116  Q
    ||||||| ||||||||  |||||||| |||||||||  ||| ||||| |||  ||  ||||||||||||||| |||||| || ||||||||| | |||||    
T  19062279 atttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgctcgcagattcaccctttacgtttttagca-tgtttgtatctaatata 19062181  T
Q  117 ctctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||| |||||||||||||||||| ||||    
T  19062180 ctctatcaatttaaatgaatgaatattgttt 19062150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 36943065 - 36942924
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||| ||  || ||||| ||||||  |  ||||||||| | | |||  ||||||||||||||| |||||| | ||||||    
T  36943065 ttttatcatattatttgtaggcattatgccgt-gtatgctattaatctgggtgctgtgagtatgttcgcagattcaccctttacgtttttagcgatgttt 36942967  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| |||||||| ||||| ||||||||||||||||||    
T  36942966 gtatctgatgtactctattgatttgaatgaatgaatatcgttt 36942924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 7 - 147
Target Start/End: Complemental strand, 9169200 - 9169059
Alignment:
Q  7 ttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattc-accctttacatttttatcaatgtttg 105  Q
    ||||||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||| |||||| ||||||||| ||||||   ||||||     
T  9169200 ttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcacagattcaaccctttacgtttttagtgatgtttt 9169101  T
Q  106 tatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||| ||||  |||| |||||||| |||||| |||||||||||    
T  9169100 tatctgatgcactcaatcgatttgaatgaacgaatatcgttt 9169059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 12554129 - 12554036
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttt 94  Q
    ||||||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||    
T  12554129 taggttttatcatattatttgtaggcattttgtcgttgtatgatattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttt 12554036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 1415709 - 1415851
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||| |||||||||| |||||||   |||  ||| |||||||||  ||| ||||| ||| |||  ||||||||| || || |||||| | ||    
T  1415709 taggttttatcagattatttgtaggcattttaccgtttaatgctattaacttgggtgttgtgagtttgttcgcagattcacctttaacgtttttagcgat 1415808  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||||||| |||| || ||||||||||| ||||||||||||||    
T  1415809 gtttgtatctgatgtaatctatcgatttgaatgaatgaatatc 1415851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 76 - 147
Target Start/End: Complemental strand, 31193209 - 31193138
Alignment:
Q  76 attcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||||||| ||||||   |||||||||| |||| |||||||||||||| ||||||||||||||||||    
T  31193209 attcaccctttacgtttttagtgatgtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 31193138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 6358825 - 6358735
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||||| | ||||||| |||||||| |||||||||  ||| ||||| ||||||| |||||||||  ||||| ||||||    
T  6358825 ttttatcatattatttgtacgtattttgtcgttgtatgctattaacttgggtgttgtgagttttttcgtagattcactatttacgttttta 6358735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 12677398 - 12677253
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||| ||| |||||||   ||| |||| |||||||||  ||  | ||| ||| |||  ||||||||||||||  |||||| | ||    
T  12677398 taggttttatcatattatt-gtaggcatttttccgttttatgctattaacttgggtattatgagtttattcgcagattcaccctttatgtttttagcgat 12677300  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| || ||| ||||||| ||||||||||||||||||    
T  12677299 gtttgtatctgatgtaatctgtcgatttgaatgaatgaatatcgttt 12677253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 29279514 - 29279361
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||  ||| |||| |||||||| | ||| ||||| ||| |||  | ||||||| ||||| |||||| | |||| |    
T  29279514 ttttatcatattatttgtaggcattttgccgttttatgctattaactatggtgttgtgagtttgttcgcatattcaccatttacgtttttagcgatgtct 29279415  T
Q  105 gt-----atatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||     || ||||||||| |||| |||| ||||||||||||||||||| ||||    
T  29279414 gtatttgatgtgatatactttatcaatttgaatgaatgaatatcgtttagtttt 29279361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 10237156 - 10237070
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||| ||| ||||||    
T  10237156 atcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctatacgttttta 10237070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 30399973 - 30399835
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||  || |||||| ||||||||  ||| ||| | ||| |||  ||||||| |||||||||||||  | || |||    
T  30399973 ttttatcatattatttgtaggcattttgccgtcgtatgtcattaacttaggtgttgtaagtttgttcgcagattcatcctttacattttttgcgatattt 30399874  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
     ||| |||| ||||| ||| |||| ||| ||||||||||    
T  30399873 atatctgatgtactcgatcaatttgaataaatgaatatc 30399835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 7 - 95
Target Start/End: Complemental strand, 33760135 - 33760047
Alignment:
Q  7 ttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||| |||||||| ||||||| | ||||||||| |||||||| | ||| || | ||| ||| ||||||| ||||||    
T  33760135 ttatcatattatttgtaggcattttgctgttgtaagctattaacttgtgtgctgttagtttgtttacagactcatcctttacgttttta 33760047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 13878701 - 13878646
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 170  Q
    ||||||||| |||| |||||||||||||||||||||||| | | ||||||||||||    
T  13878701 tactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaatatata 13878646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 170
Target Start/End: Complemental strand, 14018826 - 14018771
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 170  Q
    ||||||||| |||| |||||||||||||||||||||||| | | ||||||||||||    
T  14018826 tactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaatatata 14018771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Complemental strand, 32448557 - 32448470
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||   || ||||| ||| |||||||||||| | |||| |||||||    
T  32448557 tatcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcatagattcatcatttatattttta 32448470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 170
Target Start/End: Original strand, 36868433 - 36868492
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatata 170  Q
    ||||||||||||| |||| |||||||||||||||||||||||| | | |||||| |||||    
T  36868433 gatatactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaaaatata 36868492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 109 - 147
Target Start/End: Complemental strand, 459098 - 459060
Alignment:
Q  109 atgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||||||||||||||| ||||||||||||||||||    
T  459098 atgatatactctatcgatttgaatgaatgaatatcgttt 459060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 3309105 - 3309191
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||  |||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||| ||| ||||||    
T  3309105 atcatattatttgtagtcattttgccgttgtatgctattaacttgggtgctgtgagtttattcgcagattcaccctatacgttttta 3309191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 14955685 - 14955775
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||||||  |||||| |  |||||||||||||||||  ||| ||||| ||| |||  ||||||| |||||| |||||||    
T  14955685 ttttatcatattatttgtagacattttatcattgtatgttattaacttaggtgttgtgagtttgttcgcagattcatcctttatattttta 14955775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Complemental strand, 28533898 - 28533808
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||||| | ||||||| |||||||| |||||||||  ||| ||||| ||| |||  |||| |||| ||||| ||||||    
T  28533898 ttttatcatattatttgtaggtattttgtcgttgtatgctattaacttgagtgttgtgagtttgttcgcagatccaccttttacgttttta 28533808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 37994440 - 37994581
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| |||||||| |||| |||| |||||||||  ||| ||||| ||| |||  ||||||| | |||||  |||||   ||| ||    
T  37994440 ttttatcatattatttgtaggcattttgctgttatatgctattaacttgggtgttgtgagtttgttcgcagattcatcttttacgattttagggatg-tt 37994538  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |  | |||| || |||||| |||| ||||||||||||||||||    
T  37994539 gattctgatgtattctatcaatttgaatgaatgaatatcgttt 37994581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43397066 - 43396973
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||| | ||| |||  ||||||||||||||| ||||||    
T  43397066 taggttttatcatattatttgtacgcattttgccgttttatgctattaacttgggtgttgttagtttgttc-cagattcaccctttacgttttta 43396973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 110 - 171
Target Start/End: Complemental strand, 11550377 - 11550316
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatatat 171  Q
    |||| ||||||||| |||| |||||||||||||| ||||||||| | |||||||| ||||||    
T  11550377 tgatgtactctatcaatttgaatgaatgaatatcatttatttttgtcagaaaaaaaatatat 11550316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 103
Target Start/End: Complemental strand, 28871731 - 28871634
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||| || | ||||||||||||  |||||||  |||||||||   |||||||| ||| ||| | ||||||||||||| ||||||| |||||||    
T  28871731 tttatcatactaatcgtaagcattttgccgttgtatactattaacttggatgctgtgagtttgttcgtggattcaccctttatatttttagcaatgtt 28871634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 8 - 155
Target Start/End: Complemental strand, 17249088 - 17248941
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgta 107  Q
    ||||||||||||||||  |||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||| | ||||| |||||| | ||  |||      
T  17249088 tatcatattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcatttacgtttttagcgat-cttgat 17248990  T
Q  108 tatgatatactctatcgatttaaatgaatgaatatc-gtttatttttat 155  Q
    | |||| || | ||||||||| ||||||||||||||  |||||||||||    
T  17248989 tctgatgtattttatcgatttgaatgaatgaatatcattttatttttat 17248941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 17767262 - 17767210
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatat 167  Q
    ||||||||| |||||||||||||||||||||||||| || | | |||||||||    
T  17767262 tactctatcaatttaaatgaatgaatatcgtttattgttgtaaaaaaaaatat 17767210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 53
Target Start/End: Original strand, 41694777 - 41694825
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttt 53  Q
    |||||||||||||||| || ||||||||| ||| |||||||||||||||    
T  41694777 ttttatcatattatttataggcattttgtcgttatatgttattaacttt 41694825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 110 - 166
Target Start/End: Original strand, 43696292 - 43696348
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaata 166  Q
    |||| ||||||||| |||| |||||||||||||||||||||||| | | ||||||||    
T  43696292 tgatgtactctatcaatttgaatgaatgaatatcgtttatttttgtcaaaaaaaata 43696348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 10548343 - 10548390
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||| ||| ||||||| || ||||||||||||||||||||||||||||    
T  10548343 ttttctcaaattatttataggcattttgttgttgtatgttattaactt 10548390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 10929821 - 10929868
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||||| || |||||||||||||| ||| |||||||||    
T  10929821 ttttatcatattatttataggcattttgttgttgaatgctattaactt 10929868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 150
Target Start/End: Complemental strand, 11798230 - 11798195
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatt 150  Q
    ||||||||| ||||||||||||||||||||||||||    
T  11798230 tactctatcaatttaaatgaatgaatatcgtttatt 11798195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 100
Target Start/End: Original strand, 16376095 - 16376190
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||  ||||||| |||||||||  ||||||||   || ||||| ||| |||  ||||||||| | |||||||||| ||||    
T  16376095 ttttatcatattatttgtagtcattttggtgttgtatgcgattaacttggatgatgtgagtttgttcgcagattcaccgtctacatttttaacaat 16376190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 108
Target Start/End: Complemental strand, 19028858 - 19028755
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||| |||||||| ||||||| | ||| |||| |||||||||  ||| |||||  || |||  | ||||||| |||||||||||| |||| |||    
T  19028858 ttttatcatactatttgtaggcattttttcgttttatgctattaacttgagtgttgtgagattgttcgcaaattcaccttttacatttttaacaatattt 19028759  T
Q  105 gtat 108  Q
    ||||    
T  19028758 gtat 19028755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 4 - 95
Target Start/End: Complemental strand, 27097352 - 27097261
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||||||| | ||||||  |||||||  |||||||||  ||| ||||| ||| ||   ||||||||||||||| ||||||    
T  27097352 gttttatcatattatttgtaggaattttgccgttgtatactattaacttgggtgttgtgagtttgtttgcagattcaccctttacgttttta 27097261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 32190820 - 32190867
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||||||||||||||||  | ||||||| |||||||||    
T  32190820 ttttatcatattatttgtaagcatttttctattgtatgctattaactt 32190867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 3527415 - 3527453
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  3527415 tactctatcaatttgaatgaatgaatatcgtttattttt 3527453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 4604012 - 4603970
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||| ||||||||||||||||||| ||||    
T  4604012 gatatactctatcaatttgaatgaatgaatatcgtttactttt 4603970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 7640035 - 7639997
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| ||||||||||||||||||| |||||||||    
T  7640035 tactctatcaatttaaatgaatgaatatcatttattttt 7639997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Complemental strand, 8064503 - 8064457
Alignment:
Q  106 tatatgatatactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    ||||| |||||||||||| || | |||||||||||||||||||||||    
T  8064503 tatatcatatactctatcaatgtgaatgaatgaatatcgtttatttt 8064457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 9689677 - 9689639
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| ||||||||||||| |||||||||||||||    
T  9689677 tactctatcaatttaaatgaatgtatatcgtttattttt 9689639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 9978374 - 9978332
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||| ||||||||||||| ||||||||||    
T  9978374 gatatactctatcaatttgaatgaatgaatatagtttattttt 9978332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 11942797 - 11942835
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||||| ||||||||||||||||||| ||||    
T  11942797 tactctatcgatttgaatgaatgaatatcgtttactttt 11942835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 13548611 - 13548573
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||| |||| |||||||||||||||||||||||||||||    
T  13548611 tactatatcaatttaaatgaatgaatatcgtttattttt 13548573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 16136507 - 16136545
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  16136507 tactctatcaatttgaatgaatgaatatcgtttattttt 16136545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 17151581 - 17151627
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||| ||| | |||||||||||||||| |||||||||    
T  17151581 tttatcatattattagtaggtattttgttgttgtatgctattaactt 17151627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 18107690 - 18107604
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||| ||| ||| ||||||||||  ||| ||||| ||| |||  | |||||| |||||| ||||||    
T  18107690 atcatattatttgtaggcattttgtcgttttatattattaacttgcgtgttgtgagtttgttcgcatattcactctttacgttttta 18107604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 20560825 - 20560787
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  20560825 tactctatcaatttgaatgaatgaatatcgtttattttt 20560787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 25068270 - 25068308
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  25068270 tactctatcaatttgaatgaatgaatatcgtttattttt 25068308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 29543222 - 29543260
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  29543222 tactctatcaatttgaatgaatgaatatcgtttattttt 29543260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 110 - 152
Target Start/End: Complemental strand, 31908514 - 31908472
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    |||| ||||||||| |||| |||||||||||||||||||||||    
T  31908514 tgatgtactctatcaatttgaatgaatgaatatcgtttatttt 31908472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 113 - 155
Target Start/End: Complemental strand, 32711921 - 32711879
Alignment:
Q  113 tatactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||||  ||| |||||||||||||||||||||||||||    
T  32711921 tatactctattaattaaaatgaatgaatatcgtttatttttat 32711879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 33012477 - 33012515
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  33012477 tactctatcaatttgaatgaatgaatatcgtttattttt 33012515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 47
Target Start/End: Original strand, 33140587 - 33140625
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttatt 47  Q
    ||||||||||||||| ||||||||| |||||||||||||    
T  33140587 atcatattatttgtaggcattttgtggttgtatgttatt 33140625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 35333934 - 35333972
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  35333934 tactctatcaatttgaatgaatgaatatcgtttattttt 35333972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 109 - 143
Target Start/End: Original strand, 43711790 - 43711824
Alignment:
Q  109 atgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||||||||||||||| |||||||||||||||||||    
T  43711790 atgatatactctatcaatttaaatgaatgaatatc 43711824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 7 - 52
Target Start/End: Complemental strand, 18056403 - 18056358
Alignment:
Q  7 ttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||| |||||||  ||||||||| |||||||    
T  18056403 ttatcatattatttgtaagtattttgtcattgtatgttgttaactt 18056358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #76
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 44942715 - 44942752
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    ||||||||| |||| |||||||||||||||||||||||    
T  44942715 tactctatcaatttgaatgaatgaatatcgtttatttt 44942752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 12705115 - 12705155
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||| |||| |||||||||||||| |||||||||||    
T  12705115 tactctatcaatttgaatgaatgaatatcctttatttttat 12705155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 34962687 - 34962647
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||| |||| |||||||||||||| |||||||||||    
T  34962687 tactctatcaatttgaatgaatgaatatcatttatttttat 34962647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 81; Significance: 3e-38; HSPs: 66)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 35484336 - 35484192
Alignment:
Q  3 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 102  Q
    ||||||||||||||||||||||||||||||  |||||||| |||||||||  ||| ||||| ||| |||  |||||| ||||||||||||||| | ||||    
T  35484336 ggttttatcatattatttgtaagcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcgccctttacatttttagcgatgt 35484237  T
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||| |||| |||||||||||||| ||||||||||||||||||    
T  35484236 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 35484192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 11462426 - 11462283
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| | ||||||| |||||||| |||||||||  ||||||||| ||| ||| |||||||||| ||||| |||||| | |||||    
T  11462426 gttttatcatattatttgtaggaattttgtcgttgtatgctattaacttgggtgctgtgagtttgttcgtagattcaccatttacgtttttagcgatgtt 11462327  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||||||||||||    
T  11462326 tgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 11462283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 155
Target Start/End: Original strand, 31984306 - 31984459
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||| |||||||||||| |||||||| |||||||||  ||| ||||||||| |||  ||||| ||||||||| |||||| ||||    
T  31984306 taggttttatcatattatttttaagcattttgtcgttgtatgctattaacttgggtgttgtgactttgttcgcagatttaccctttacgtttttaacaat 31984405  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcg-tttatttttat 155  Q
    || ||||| |||| |||||  ||||||||||||||||||||||| |||||||||||    
T  31984406 gtgtgtatttgatgtactc--tcgatttaaatgaatgaatatcgttttatttttat 31984459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 21947562 - 21947419
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  ||||||| ||||||||||  ||| ||||| ||| |||  ||||| |||||||||||||||| | || ||    
T  21947562 gttttatcatattatttgtaggcattttgccgttgtattttattaacttgggtgatgtgagtttgttcgcagatttaccctttacatttttaacgatatt 21947463  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||||| |||||||||||||| ||||||||||||||||||    
T  21947462 tgtatatgatgtactctatcgatttgaatgaatgaatatcgttt 21947419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 4413259 - 4413405
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| |||||||| ||||||||| |||||| ||  ||||||||| ||| |||| ||||||| ||||||| |||||| | ||    
T  4413259 taggttttatcatattatttgtaggcattttgctgttgtatgctattaaattgagtgctgtgaatttgttcacagattcatcctttacgtttttagcgat 4413358  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| || |||| ||||||||||    
T  4413359 gtttgtatctgatgtactctatcgatttgaacgaataaatatcgttt 4413405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 7337608 - 7337465
Alignment:
Q  3 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 102  Q
    ||||||||||||||||||||| |||||||| ||||| ||| |||||||||   || ||||| ||| |||  |||||||||||||| ||||||| | ||||    
T  7337608 ggttttatcatattatttgtaggcattttgctgttgcatgctattaacttggctgttgtgagtttgttcgcagattcaccctttatatttttagcgatgt 7337509  T
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgtt 146  Q
    |||||| |||| |||||||||||||| |||||||||||||||||    
T  7337508 ttgtatctgatgtactctatcgatttgaatgaatgaatatcgtt 7337465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 143
Target Start/End: Original strand, 14872784 - 14872926
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||  | ||||||||||||| | ||   | ||    
T  14872784 taggttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacttcttctgcgat 14872883  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||||||| |||| |||||||||||||||||||||||||||||    
T  14872884 gtttgtatgtgatgtactctatcgatttaaatgaatgaatatc 14872926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 34878225 - 34878079
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||| ||||| ||| |||| ||||||||| ||||| |||||| | ||    
T  34878225 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgttgtgagtttgttcacagattcaccttttacgtttttagcgat 34878126  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||  || |||| || ||||||||||| ||||||||||||||||||    
T  34878125 gtttccatctgatgtaatctatcgatttgaatgaatgaatatcgttt 34878079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 49504540 - 49504396
Alignment:
Q  3 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 102  Q
    ||||||| |||| ||||| || |||||||   |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | ||||    
T  49504540 ggttttaacataatatttttaggcattttaccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttaacgatgt 49504441  T
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||| | || |||||||||||||| ||||||||||||||||||    
T  49504440 ttgtatcttatgtactctatcgatttgaatgaatgaatatcgttt 49504396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 10776408 - 10776266
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||| ||||||||| |||||||| ||||||||  |||||||||  ||||||||| ||| |||  |  |||||||||||| |||||| | ||    
T  10776408 taggttttatcattttatttgtaggcattttgctgttgtattctattaacttgggtgctgtgagtttgttcgcaatttcaccctttacgtttttagcgat 10776309  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||||| || |||||||||||||| |||| |||||| |||||||    
T  10776308 gtttgcatctgatatactctatcaatttgaatgaacgaatatc 10776266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 16989516 - 16989662
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| ||   ||||| ||| ||||| ||||||   ||    
T  16989516 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgtttgcagatttaccatttacgtttttagtgat 16989615  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||||||| || ||||||||||| |||||||||| |||||||    
T  16989616 gtttgtatatgatgtaatctatcgatttgaatgaatgaaaatcgttt 16989662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 51373801 - 51373659
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||| || ||||| |||||||||  ||| ||||| ||| ||   ||||||||||||||| |||||||| ||||||    
T  51373801 ttttatcatattatttgtaggcattttgtcgtcgtatgctattaacttgggtgttgtgagtttgtttggagattcaccctttacgtttttatcgatgttt 51373702  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| | || |||| |||| |||| |||||||||| |||||||    
T  51373701 gtatctaatgtactttatcaatttgaatgaatgaacatcgttt 51373659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 153
Target Start/End: Complemental strand, 29738611 - 29738459
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||| |||||||||||||| |  |||||| |  |||||||| |||||||||  ||||||||| ||  |||  ||||||||||||||| ||||||   ||    
T  29738611 taggtgttatcatattatttattggcatttggccgttgtatgctattaacttgggtgctgtgagttcgttcgcagattcaccctttacgtttttagtgat 29738512  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||| |||| |||||||||||||| ||||| |||||||||||| |||||    
T  29738511 gtttgtatctgatgtactctatcgatttgaatgattgaatatcgtttgttttt 29738459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 21687523 - 21687669
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||| | ||| |||| |||||| ||  ||| ||||| ||| ||   ||||||||| ||||| ||| || | ||    
T  21687523 taggttttatcatattatttgtaggcattttctcgttttatgctattaatttgggtgttgtgagtttgttagcagattcaccttttacgtttctagcgat 21687622  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| || ||||||||||| ||||||||||||||||||    
T  21687623 gtttgtatctgatgtaatctatcgatttgaatgaatgaatatcgttt 21687669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 32395146 - 32395288
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||||| || ||||||||  | |||||| |||||||||  ||||||| | ||| |||   |||||||||||||| |||||| |  ||||    
T  32395146 gttttatcatattatttataggcattttgccgctgtatgctattaacttgggtgctgtaagtttgttcgc-gattcaccctttacgtttttaacggtgtt 32395244  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| |||| |||||||||||||    
T  32395245 tgtatttgatgtactctatcgatttgaatggatgaatatcgttt 32395288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 13144755 - 13144605
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||| |||||||| ||||||||   || |||| |||||||||   || ||||| ||| |||  |||||||||||||||||||||| | ||||||    
T  13144755 ttttatcataatatttgtaggcattttgccattttatgctattaacttggatgttgtgagtttgttcgcagattcaccctttacatttttaacgatgttt 13144656  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgtttatttttatg 156  Q
    |||| |||| ||||||||| |||| ||| |||| ||||| ||| ||||||||    
T  13144655 gtat-tgatgtactctatcaatttgaataaatgcatatcatttttttttatg 13144605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 143
Target Start/End: Original strand, 44915788 - 44915926
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||  |||||||| |||  ||||  ||| ||||| ||| |||  | ||||| ||||||| ||||||   ||||||    
T  44915788 ttttatcatattatttgtaggcattttgccgttgtatgctatcgacttgggtgatgtgagtttgttcgcatattcatcctttacgtttttagtgatgttt 44915887  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||| |||| ||||||||| |||| ||||||||||||||    
T  44915888 gtatctgatgtactctatcaatttgaatgaatgaatatc 44915926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 45415703 - 45415849
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  |||||||  |||||| ||  ||| ||||| ||| |||  | ||||||||||||| |||||| | ||    
T  45415703 taggttttatcatattatttgtaggcattttgccgttgtataatattaatttgggtgttgtgagtttgttcgcatattcaccctttacgtttttagcgat 45415802  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
     | |||||||||| |||||||||  ||| |||||||  |||||||||    
T  45415803 atgtgtatatgatgtactctatcattttgaatgaattgatatcgttt 45415849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 34 - 147
Target Start/End: Original strand, 26535514 - 26535627
Alignment:
Q  34 tgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatg 133  Q
    ||||||||| |||||||||  ||| ||||| ||| ||| |||||| | | ||||| |||||| | |||||||||| |||| ||||||||| |||| ||||    
T  26535514 tgttgtatgctattaacttgagtgttgtgagtttgttcgtagatttatcatttacgtttttagctatgtttgtatctgatgtactctatcaatttgaatg 26535613  T
Q  134 aatgaatatcgttt 147  Q
    ||||||||||||||    
T  26535614 aatgaatatcgttt 26535627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 24583102 - 24583236
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgta 107  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||| ||||||| ||||||| |||||| | ||  |||      
T  24583102 tatcatattatttgtaggcattttgccgttgtatgatattaacttgggtgatgtgagtttgttcacagattcatcctttacgtttttagcgat-cttgat 24583200  T
Q  108 tatgatatactctatcgatttaaatgaatgaatatc 143  Q
    | |||| || ||||||||||| ||||||||||||||    
T  24583201 tctgatgtattctatcgatttgaatgaatgaatatc 24583236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 8 - 143
Target Start/End: Original strand, 24583298 - 24583432
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgta 107  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  ||||||| |||||||||||||| | ||  |||      
T  24583298 tatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgatgtgagtttgttcgcagattcatcctttacatttttagcgat-cttgat 24583396  T
Q  108 tatgatatactctatcgatttaaatgaatgaatatc 143  Q
    | |||| || ||||||||||| ||||||||||||||    
T  24583397 tctgatgtattctatcgatttgaatgaatgaatatc 24583432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 5 - 142
Target Start/End: Complemental strand, 27580071 - 27579934
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||  |||||||||||   || |||| |||||||||  ||| ||||| ||| |||  ||||||||||||||   ||||| |  |||||    
T  27580071 ttttatcatattattcataagcattttgccattttatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttatcattttagcgttgttt 27579972  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatat 142  Q
    ||||||||| ||||||||| |||| ||| |||||||||    
T  27579971 gtatatgatgtactctatcaatttgaataaatgaatat 27579934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 3 - 147
Target Start/End: Original strand, 31919136 - 31919285
Alignment:
Q  3 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 102  Q
    |||||||||||||||||||||  |||||||| |||||||| |||||||||   || || || ||| |||  ||||||| ||||||| |||||| | | ||    
T  31919136 ggttttatcatattatttgtagacattttgtcgttgtatgctattaacttggatgttgcgagtttgttcgcagattcatcctttacgtttttagcgaagt 31919235  T
Q  103 ttgtatatgatat-----actctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||||||| |     |||||||| |||| ||||||||||| ||||||    
T  31919236 ttgtatatgatgtgatgtactctatcaatttgaatgaatgaatttcgttt 31919285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 4 - 87
Target Start/End: Original strand, 5983984 - 5984067
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 87  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  | ||||||||||||    
T  5983984 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgggtgatgtgagtttgttcgcatattcacccttta 5984067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 14489421 - 14489468
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||    
T  14489421 ttttatcatattatttgtaggtattttgttgttgtatgttattaactt 14489468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 5 - 120
Target Start/End: Complemental strand, 15431609 - 15431494
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||||||  |||||| | |||||||| |||| ||||   || ||||| ||| |||  ||||||| ||||||| |||||| ||||||||    
T  15431609 ttttatcatattatttgtagacattttatcgttgtatgctattcacttggatgttgtgagtttgttcgcagattcatcctttacgtttttagcaatgttt 15431510  T
Q  105 gtatatgatatactct 120  Q
    |||| |||| ||||||    
T  15431509 gtatctgatgtactct 15431494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 7836743 - 7836657
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 87  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  ||||||| ||||||    
T  7836743 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatccttta 7836657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 34413031 - 34412945
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||  ||||||||||||||||||  ||| ||||| ||| |||  ||||||||||| ||| ||||||    
T  34413031 atcatattatttgtaggcattttgcggttgtatgttattaacttgggtgttgtgagtttgttcgcagattcaccctatacgttttta 34412945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 78 - 147
Target Start/End: Complemental strand, 23289262 - 23289193
Alignment:
Q  78 tcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||||| | |||| | ||||||||||||||| || ||||||||||| ||||||||||||||||||    
T  23289262 tcactctttacgtatttagcgatgtttgtatatgatgtaatctatcgatttgaatgaatgaatatcgttt 23289193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 75 - 147
Target Start/End: Original strand, 940457 - 940529
Alignment:
Q  75 gattcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||| ||||||  |||||| | |||||||||| | || |||||||| ||||||||||||||||||||||||    
T  940457 gattcatcctttaagtttttagcgatgtttgtatcttatgtactctattgatttaaatgaatgaatatcgttt 940529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 46399122 - 46399166
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||    
T  46399122 tatcatattatttataaacattttgttgttgtatgttattaactt 46399166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 3228414 - 3228465
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||||||| ||||||||  ||| ||||||||||||||    
T  3228414 taggttttatcatattatttgtaggcattttgccgttatatgttattaactt 3228465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 95
Target Start/End: Original strand, 44543424 - 44543511
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  ||||||| ||||||| ||||||    
T  44543424 tatcatattatttgtaggcattttgccgttttatgctattaacttgggtgctgtgagtttgttcgcagattcatcctttacgttttta 44543511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 39888331 - 39888473
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||| ||| || ||||||| | |||||||| |||||||||   || ||||| ||| |||  |||||||| |||||| |||| |   ||||||    
T  39888331 ttttatcatattctttatatgcattttatcgttgtatgctattaacttagatgttgtgagtttattcgcagattcactctttacgttttgagtgatgttt 39888430  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| || | |||| ||||  |||||||||||||||||    
T  39888431 gtatctgatgtattatatcaatttgtatgaatgaatatcgttt 39888473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 94
Target Start/End: Original strand, 16161977 - 16162066
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttt 94  Q
    ||||||||||||||||||| ||||||||  || | ||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||    
T  16161977 ttttatcatattatttgtaggcattttgccgtggaatgctattaacttaggtgttgtgagtttgttcgcagattcaccctttacgttttt 16162066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 102 - 147
Target Start/End: Complemental strand, 36894254 - 36894209
Alignment:
Q  102 tttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||| |||| |||||||||||||| ||||||||||||||||||    
T  36894254 tttgtatttgatgtactctatcgatttgaatgaatgaatatcgttt 36894209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 45 - 141
Target Start/End: Original strand, 1742476 - 1742572
Alignment:
Q  45 attaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaata 141  Q
    ||||||||  ||| ||||| ||| |||| ||||||||||||||| |||||| | |||||| ||| |||| || | || |||||| ||||||||||||    
T  1742476 attaacttgggtgatgtgagtttattcacagattcaccctttacgtttttagcgatgtttatatctgatgtaatatagcgatttgaatgaatgaata 1742572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 59 - 147
Target Start/End: Complemental strand, 8211196 - 8211108
Alignment:
Q  59 tgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| ||| ||| ||||||||| |||||| |||||| | |||||||||| | || ||||||||||| || | ||||||||||| ||||    
T  8211196 tgtgagtttgttcgtagattcacgctttacgtttttagcgatgtttgtatctaatgtactctatcgaattgattgaatgaatattgttt 8211108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 9341875 - 9341963
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 93  Q
    ||||||||||||||||||| | |||||||||||||||  |||||||||   |  ||||| ||| ||| |||||||||| ||||| ||||    
T  9341875 ttttatcatattatttgtaggtattttgttgttgtatactattaacttgaatattgtgagtttattcttagattcaccttttacgtttt 9341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 111 - 155
Target Start/End: Complemental strand, 12147758 - 12147714
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||||||| |||| |||||||||||||||| |||||||||    
T  12147758 gatatactctatcaatttgaatgaatgaatatcgtctatttttat 12147714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 143
Target Start/End: Complemental strand, 19596405 - 19596265
Alignment:
Q  3 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 102  Q
    ||||||||||||||||||||| ||||||||  ||| |||| |||||||||   ||||  || ||| |||  ||||||||| ||||| |||||| | || |    
T  19596405 ggttttatcatattatttgtaggcattttgccgttttatgctattaacttggatgctacgagtttgttcgcagattcaccttttacgtttttagcgatat 19596306  T
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    || ||| | || || ||||| ||||| |||||| |||||||    
T  19596305 ttctatctaatgtaatctattgatttgaatgaacgaatatc 19596265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 155
Target Start/End: Complemental strand, 25032795 - 25032755
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||| |||| ||||||||||||||||||||||||||    
T  25032795 tactctatcaatttgaatgaatgaatatcgtttatttttat 25032755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Complemental strand, 34659347 - 34659295
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatat 167  Q
    ||||||||| |||| |||||||||||||| ||||||||| | |||||||||||    
T  34659347 tactctatcaatttgaatgaatgaatatcatttatttttgtaagaaaaaatat 34659295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 49648818 - 49648774
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 49  Q
    |||||| ||||||||||||| ||||||||| ||||||||||||||    
T  49648818 ttttattatattatttgtaaacattttgttattgtatgttattaa 49648774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 153
Target Start/End: Original strand, 1141110 - 1141145
Alignment:
Q  118 tctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||||| |||||||||||||||||||||    
T  1141110 tctatcgatttaaaagaatgaatatcgtttattttt 1141145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 154
Target Start/End: Complemental strand, 33703216 - 33703177
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttta 154  Q
    ||||||||| ||||||| ||||||||||||||||||||||    
T  33703216 tactctatcaatttaaacgaatgaatatcgtttattttta 33703177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 4882069 - 4882031
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  4882069 tactctatcaatttgaatgaatgaatatcgtttattttt 4882031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 12872035 - 12872073
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  12872035 tactctatcaatttgaatgaatgaatatcgtttattttt 12872073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 13152856 - 13152894
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  13152856 tactctatcaatttgaatgaatgaatatcgtttattttt 13152894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 17348004 - 17348042
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  17348004 tactctatcaatttaaatgagtgaatatcgtttattttt 17348042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 29205697 - 29205735
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  29205697 tactctatcaatttgaatgaatgaatatcgtttattttt 29205735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 52
Target Start/End: Complemental strand, 30712239 - 30712197
Alignment:
Q  10 tcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||| ||||||||||||| |||| |||||||||    
T  30712239 tcatattatttgtaggcattttgttgttctatgctattaactt 30712197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Complemental strand, 36775649 - 36775563
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||   || ||||| ||| |||  ||||||||||| ||| ||||||    
T  36775649 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgttgtgagtttgttcgcagattcaccctatacgttttta 36775563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 44517577 - 44517615
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  44517577 tactctatcaatttgaatgaatgaatatcgtttattttt 44517615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 48750338 - 48750424
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  | ||||||||| ||| ||||||    
T  48750338 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgttgtgagtttgttcgcatattcaccctatacgttttta 48750424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 50377472 - 50377614
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||| | |||| |||||||   || |||||||||||||||  |||||| || ||| |||  |  |||| ||||||| |||||| | ||||||    
T  50377472 ttttatcatattgtctgtaggcatttttccgtcgtatgttattaacttgggtgctgagagtttgttcgcaatttcatcctttacgtttttagcgatgttt 50377571  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
     ||| |||| ||   |||| |||| ||||||||||||||||||    
T  50377572 atatctgatgtatcttatcaatttgaatgaatgaatatcgttt 50377614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 51418413 - 51418451
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  51418413 tactctatcaatttaaatgaatgaatatcgtttactttt 51418451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 118 - 155
Target Start/End: Original strand, 3233203 - 3233240
Alignment:
Q  118 tctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    |||||| |||| ||||||||||||||||||||||||||    
T  3233203 tctatcaatttgaatgaatgaatatcgtttatttttat 3233240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 110 - 147
Target Start/End: Original strand, 5984070 - 5984107
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||||| ||||||||||| ||||||||||||||||||    
T  5984070 tgatatattctatcgatttgaatgaatgaatatcgttt 5984107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 115 - 152
Target Start/End: Original strand, 8758070 - 8758107
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    ||||||||| ||||||||||||||||||||| ||||||    
T  8758070 tactctatcaatttaaatgaatgaatatcgtatatttt 8758107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 28053660 - 28053623
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatg 42  Q
    ||||||||||||||||||| ||||||| ||||||||||    
T  28053660 ttttatcatattatttgtaggcattttattgttgtatg 28053623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 31317886 - 31317975
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||||| ||||||| | |||| ||  |||||||||  ||| ||||| ||| |||  | ||||||||||||| ||||||    
T  31317886 tttatcatattatttgtaggcattttatcgttgcatcctattaacttgggtgatgtgagtttgttcgcaaattcaccctttacgttttta 31317975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 112 - 148
Target Start/End: Original strand, 171531 - 171567
Alignment:
Q  112 atatactctatcgatttaaatgaatgaatatcgttta 148  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  171531 atatactctatcaatttaaatgaatgaatatcattta 171567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Original strand, 19061061 - 19061105
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||||| ||||||||  |||||||| |||||||||    
T  19061061 tatcatattatttgtaggcattttgccgttgtatgctattaactt 19061105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 143
Target Start/End: Original strand, 45659422 - 45659450
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatc 143  Q
    |||||||||||||||||||||||||||||    
T  45659422 tactctatcgatttaaatgaatgaatatc 45659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 155
Target Start/End: Original strand, 49652243 - 49652283
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttat 155  Q
    ||||||||| |||| |||||||||||||| |||||||||||    
T  49652243 tactctatcaatttgaatgaatgaatatcatttatttttat 49652283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 80; Significance: 1e-37; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 67945 - 67802
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||||| || ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| |||||||    
T  67945 gttttatcatattatttataggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcaatgtt 67846  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| ||||||||||||||||||| |||||||||||| |||||    
T  67845 tgtatctgatatactctatcgatttgaatgaatgaataccgttt 67802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 12170611 - 12170757
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||| ||||||||||||||| |||||||| ||||||||| |||||||||  ||||||||| |||  ||  | |||||||||||||||||||| | ||    
T  12170611 taggtttgatcatattatttgtaggcattttgctgttgtatgctattaacttgggtgctgtgagtttgctcgcatattcaccctttacatttttagcgat 12170710  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  12170711 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 12170757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 9341595 - 9341452
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||| |||||| ||||||||| |||||||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| |||||||    
T  9341595 gttttatcatattgtttgtaggcattttgtcgttgtatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgtttttagcaatgtt 9341496  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| |||||||||||||| ||||||||| ||||||||    
T  9341495 tgtatctgatgtactctatcgatttgaatgaatgagtatcgttt 9341452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 143
Target Start/End: Original strand, 606350 - 606489
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||   ||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| |||||| | |||||    
T  606350 gttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttaacgatgtt 606449  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||||| |||| |||||||||||||| ||||||||||||||    
T  606450 tgtatctgatgtactctatcgatttgaatgaatgaatatc 606489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 33053112 - 33052969
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||  | ||||||||||||| |||||| |||||||    
T  33053112 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcatattcaccctttacgtttttagcaatgtt 33053013  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| ||||||||| |||| ||||||||||||||||||    
T  33053012 tgtatttgatgtactctatcaatttgaatgaatgaatatcgttt 33052969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 3913521 - 3913375
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||   ||||||| |||||||||  ||| ||||| ||| |||  |||| |||||||||| |||||| | ||    
T  3913521 taggttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgttgtgagtttgttcgcagatgcaccctttacgtttttagcgat 3913422  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  3913421 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 3913375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 4 - 142
Target Start/End: Original strand, 23128764 - 23128902
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||| ||  ||||||||| ||| |||  |||||||||||||||||||||| | |||||    
T  23128764 gttttatcatattatttgtaggcattttgccgttgtatgctattaatttgggtgctgtgagtttgttcgcagattcaccctttacatttttagcgatgtt 23128863  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatat 142  Q
    ||||| |||| |||||| || |||| |||||||||||||    
T  23128864 tgtatctgatgtactctgtctatttgaatgaatgaatat 23128902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 32327164 - 32327021
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||   ||| |||||||||  ||||||||| ||| |||  | ||||||||||||| |||||| | ||    
T  32327164 taggttttatcatattatttgtaggcattttgccgt---atgctattaacttgggtgctgtgagtttgttcgcatattcaccctttacgtttttagcgat 32327068  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||| |||| |||||||||||||| ||||||||||||||||||    
T  32327067 gtttgtatctgatgtactctatcgatttgaatgaatgaatatcgttt 32327021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 12 - 145
Target Start/End: Complemental strand, 21426622 - 21426489
Alignment:
Q  12 atattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatg 111  Q
    ||||||||||||  |||||||  |||||||| |||||||||  ||||||||| ||| |||  | ||||||| ||||| |||||| | |||||||||| ||    
T  21426622 atattatttgtagacattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcatattcaccgtttacgtttttagcgatgtttgtatctg 21426523  T
Q  112 atatactctatcgatttaaatgaatgaatatcgt 145  Q
    || |||||||||||||| ||||||||||||||||    
T  21426522 atgtactctatcgatttgaatgaatgaatatcgt 21426489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 30894742 - 30894905
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    |||||||||||||||||||||||  ||||||| ||||||||| ||| |||||   |||||||| ||| ||   ||||||| ||||||| |||||| | ||    
T  30894742 taggttttatcatattatttgtagtcattttgctgttgtatgctatcaacttggatgctgtgagtttattgc-agattcatcctttacgtttttagcgat 30894840  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcg-tttatttttatgagaaaaaa 164  Q
    |||||||| |||| || || |||||||| ||||||||||||||| ||||||||||| | ||||||    
T  30894841 gtttgtatctgatgtattccatcgatttgaatgaatgaatatcgttttatttttataaaaaaaaa 30894905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 14175015 - 14174872
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| |||||||   ||| |||| | |||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||| |||||||    
T  14175015 gttttatcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcagattcaccttttacgtttttagcaatgtt 14174916  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| || | ||||||||| ||||||||||||||||||    
T  14174915 tgtatctgatgtaatatatcgatttgaatgaatgaatatcgttt 14174872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 14179551 - 14179408
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| |||||||   ||| |||| | |||||||  ||| ||||| ||| |||  ||||||||| ||||| |||||| |||||||    
T  14179551 gttttatcatattatttgtaggcatttttccgttttatgctgttaacttgagtgatgtgagtttgttcgcagattcaccttttacgtttttagcaatgtt 14179452  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| |||| || | ||||||||| ||||||||||||||||||    
T  14179451 tgtatctgatgtaatatatcgatttgaatgaatgaatatcgttt 14179408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 5 - 144
Target Start/End: Complemental strand, 29255389 - 29255250
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||   ||||||||| |||||||||  ||| ||||| ||| |||| |||||||||| |||| |||||| | ||||||    
T  29255389 ttttatcatattatttgtaggcatttcactgttgtatgctattaacttgggtgttgtgagtttgttcacagattcacccattacgtttttagcgatgttt 29255290  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcg 144  Q
    |||| |||| ||||| ||| |||| | |||||||||||||    
T  29255289 gtatttgatgtactccatcaatttgactgaatgaatatcg 29255250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 4 - 147
Target Start/End: Original strand, 34018706 - 34018849
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| |||||||  |||||||| |||||| |||  ||| ||||| ||| |    ||||| ||| ||||| |||||| | |||||    
T  34018706 gttttatcatattatttgtaggcattttactgttgtatattattatcttgggtgttgtgagtttgtctgcagatttaccatttacgtttttagcgatgtt 34018805  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    ||||| | |||||||||||| |||||||||||||||||||||||    
T  34018806 tgtatctaatatactctatcaatttaaatgaatgaatatcgttt 34018849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 147
Target Start/End: Complemental strand, 7515149 - 7515004
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| |||||||  || |||||| |||||||||   | |||||| ||| |||  | ||||||||||||| |||||| | ||    
T  7515149 taggttttatcatattatttgtaggcatttttctgctgtatgctattaacttggtttctgtgagtttgttcgcaaattcaccctttacgtttttagcgat 7515050  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
     ||| ||| ||||  ||||||||||||| ||||||||||||||||||    
T  7515049 -tttatatctgatgcactctatcgatttgaatgaatgaatatcgttt 7515004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 34185636 - 34185499
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| | ||||||| ||| | |  ||| |||||  ||| ||||||||| ||| |||||||||| ||||| |||||| | ||| ||    
T  34185636 ttttatcatattatttgtaggtattttgtcgttatgtactatcaacttgggtgatgtgactttattcgtagattcaccttttacttttttagcgatg-tt 34185538  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    | || |||||||||||||| |||| ||||||||||||||    
T  34185537 gaatctgatatactctatcaatttgaatgaatgaatatc 34185499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 29319822 - 29319682
Alignment:
Q  4 gttttatcatattattt-gtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 102  Q
    ||||||||||||||||| |||||||||||   |||||||| |||||||||   || | ||| ||| |||  ||||||||| ||||| |||||| | ||||    
T  29319822 gttttatcatattattttgtaagcattttaccgttgtatgctattaacttggttgttatgagtttgttcgcagattcaccttttacgtttttagcgatgt 29319723  T
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||||| ||||||||| |||  |||| ||||||||||||||    
T  29319722 ttgtatctgatatactttattaatttgaatgaatgaatatc 29319682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 5 - 152
Target Start/End: Complemental strand, 30608458 - 30608311
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| |||||||   |||||||| |||||||||   || |||||  || ||   | ||||| ||||||| |||||| | ||||||    
T  30608458 ttttatcatattatttgtaggcattttaccgttgtatgctattaacttggatgttgtgagattgtttgcaaattcatcctttacgtttttaacgatgttt 30608359  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgtttatttt 152  Q
    |||| |||| ||||||||| |||| ||||||||||| |||||| ||||    
T  30608358 gtatctgatttactctatcaatttgaatgaatgaatgtcgtttgtttt 30608311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 28981324 - 28981414
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||  ||||| | |||||||||||||||| |||||||||| ||| ||||| ||| |||| | ||||||||||||| ||||||    
T  28981324 ttttatcatattgcttgtaggaattttgttgttgtatgctattaactttggtgttgtgagtttgttcacatattcaccctttacgttttta 28981414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 30493679 - 30493821
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||| || |||||| ||||||||  |||||||| ||||||| |  ||| ||||| ||| |||  ||||||||||||||| |||||| | |||||     
T  30493679 ttttatcatgttgtttgtaggcattttgccgttgtatgctattaacctgggtgttgtgaatttgttcgcagattcaccctttacgtttttagcgatgtta 30493778  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |  | ||||||| |||||| |||| |||||||||||| |||||    
T  30493779 gattctgatatattctatctatttgaatgaatgaataacgttt 30493821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 679256 - 679353
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||| | || |||||||  |||||||| |||||||||  ||| ||||| ||| ||| |||||||||||||||| |||||| |||||||    
T  679256 ttttatcatattattcgcaaacattttgc-gttgtatgctattaacttaggtgttgtgagtttgttcgtagattcaccctttacgtttttagcaatgtt 679353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 103
Target Start/End: Original strand, 9380170 - 9380268
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    ||||||||||||||||||| ||||||||| |||||||  ||||| |||   || ||||| ||| |||  | ||||||| ||||||||||||||||||||    
T  9380170 ttttatcatattatttgtatgcattttgtcgttgtattctattatcttggatgttgtgagtttgttcgcatattcaccatttacatttttatcaatgtt 9380268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 153
Target Start/End: Complemental strand, 7976130 - 7975983
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||   |||||| ||||||||  |||||||| |||||||||  ||| ||||| ||| |||  | ||||| ||||||  |||||| |||||||     
T  7976130 ttttatcataccgtttgtaggcattttgccgttgtatgctattaacttaggtgttgtgagtttgttcgcatattcatcctttatgtttttagcaatgttg 7976031  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
     | | |||| || |||||| ||||||||||||||||||||||| |||||    
T  7976030 at-tctgatgtattctatcaatttaaatgaatgaatatcgtttgttttt 7975983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 14846168 - 14846117
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    ||||||||||||||||||||||| |||||||| |||| |||| |||||||||    
T  14846168 taggttttatcatattatttgtaggcattttgctgttttatgctattaactt 14846117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 147
Target Start/End: Original strand, 32060030 - 32060165
Alignment:
Q  12 atattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtatatg 111  Q
    |||||||||||| |||||||||  || |||| |||||| ||   || ||| | ||| |||  ||||| |||||||||||||||| | | |||||||| ||    
T  32060030 atattatttgtaggcattttgtcattttatgctattaaattggatgttgtaagtttgttcgcagatttaccctttacatttttagcgaagtttgtatctg 32060129  T
Q  112 atatactctatcgatttaaatgaatgaatatcgttt 147  Q
    || || | |||| |||| ||||||||||||||||||    
T  32060130 atgtaatatatcaatttgaatgaatgaatatcgttt 32060165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 95
Target Start/End: Original strand, 546182 - 546268
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||| ||| ||| ||||||    
T  546182 atcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcgcagattcatcctatacgttttta 546268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 8102873 - 8102963
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||||| ||||||||  || | |||||||||||||  ||||||||| ||| ||   ||||||||| ||||| ||||||    
T  8102873 ttttatcatattatttgtaggcattttgccgtggaatgttattaacttgggtgctgtgagtttgtttgcagattcaccttttacgttttta 8102963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 20225999 - 20226045
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||    
T  20225999 tttatcatattatttgtaggcattttgtcgttgtatgctattaactt 20226045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 22119983 - 22120029
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaactt 52  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||    
T  22119983 tttatcatattatttgtaggcattttgtcgttgtatgctattaactt 22120029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 95
Target Start/End: Original strand, 30776810 - 30776900
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    ||||||||||||||||||| ||||||||  || | ||| |||||||||  ||| ||||| ||| |||  ||||||||||||||| ||||||    
T  30776810 ttttatcatattatttgtaggcattttgccgtggaatgctattaacttgggtgttgtgagtttgttcgcagattcaccctttacgttttta 30776900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 31705594 - 31705632
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  31705594 tactctatcaatttaaatgaatgaatatcgtttattttt 31705632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 127816 - 127954
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||  ||||  || |||||||||   |||||||| ||| |||| | ||||||| ||||| ||||||   ||||||    
T  127816 ttttatcatattatttgtaggcattttgccgttg--tgctattaacttggttgctgtgagtttgttcacatattcaccttttacgttttta--gatgttt 127911  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
      || |||| ||||||||| |||| ||||||  ||||||||||    
T  127912 acatctgatgtactctatcaatttgaatgaacaaatatcgttt 127954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 151
Target Start/End: Complemental strand, 4921600 - 4921564
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattt 151  Q
    ||||||||| |||||||||||||||||||||||||||    
T  4921600 tactctatcaatttaaatgaatgaatatcgtttattt 4921564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 110 - 169
Target Start/End: Original strand, 31984394 - 31984453
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatatat 169  Q
    |||| ||||||||| |||| ||||||| |||||| | |||||||||| ||||||||||||    
T  31984394 tgatgtactctatcaatttgaatgaataaatatcatatatttttatgtgaaaaaatatat 31984453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 2304530 - 2304492
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||||||||||||||||| ||||    
T  2304530 tactctatcaatttaaatgaatgaatatcgtttactttt 2304492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 4085105 - 4085143
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    |||||||||||||| | ||||||||||||||||||||||    
T  4085105 tactctatcgatttgactgaatgaatatcgtttattttt 4085143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 4660857 - 4660895
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  4660857 tactctatcaatttgaatgaatgaatatcgtttattttt 4660895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 5146355 - 5146393
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  5146355 tactctatcaatttgaatgaatgaatatcgtttattttt 5146393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 12654010 - 12653972
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  12654010 tactctatcaatttgaatgaatgaatatcgtttattttt 12653972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 15589817 - 15589779
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  15589817 tactctatcaatttgaatgaatgaatatcgtttattttt 15589779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Complemental strand, 19402544 - 19402506
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  19402544 tactctatcaatttgaatgaatgaatatcgtttattttt 19402506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 23654678 - 23654716
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  23654678 tactctatcaatttgaatgaatgaatatcgtttattttt 23654716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 30813486 - 30813524
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  30813486 tactctatcaatttgaatgaatgaatatcgtttattttt 30813524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 147
Target Start/End: Original strand, 31296967 - 31297108
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||| |||||| ||||||||| |||||||| |||||| ||   || | ||| ||| |||  |  |||||||||||| |||||| | ||| ||    
T  31296967 ttttatcatattgtttgtaggcattttgtcgttgtatgctattaatttggatgatttgagtttgttcgcattttcaccctttacgtttttagcgatg-tt 31297065  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |  | |||| || |||||| |||| ||||||||||||||||||    
T  31297066 gattctgatgtattctatcaatttgaatgaatgaatatcgttt 31297108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 31804622 - 31804660
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||||||||||| ||||||||||||||||    
T  31804622 tactctatcaatttaaatgaataaatatcgtttattttt 31804660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 42
Target Start/End: Complemental strand, 35086281 - 35086247
Alignment:
Q  8 tatcatattatttgtaagcattttgttgttgtatg 42  Q
    |||||||||||||||| ||||||||||||||||||    
T  35086281 tatcatattatttgtaggcattttgttgttgtatg 35086247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 13546643 - 13546554
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||||| | ||||||| |||||||| |||||| ||  ||  || || ||| |||| ||| ||||||||||| ||||||    
T  13546643 tttatcatattatttgtaggtattttgtcgttgtatgctattaatttaagtattgcgagtttattcacagaatcaccctttacgttttta 13546554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 528293 - 528249
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 49  Q
    ||||||||||||||||||| | ||||||| |||||||| ||||||    
T  528293 ttttatcatattatttgtaggtattttgtcgttgtatgctattaa 528249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 81
Target Start/End: Original strand, 14801978 - 14802050
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcac 81  Q
    ||||||||||||||| ||||||||  |||||||| |||||||||   |||||||| ||| |||  ||||||||    
T  14801978 atcatattatttgtaggcattttgccgttgtatgctattaacttggatgctgtgagtttgttcgcagattcac 14802050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 31852136 - 31852092
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaa 49  Q
    |||||||||||||||| ||  ||||||||||||||||| ||||||    
T  31852136 ttttatcatattatttatagacattttgttgttgtatgctattaa 31852092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 32802693 - 32802781
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 93  Q
    ||||||||||||||||||| | ||||| | |||||||| |||||| ||  ||||||||| |||  ||  | ||||||||||||| ||||    
T  32802693 ttttatcatattatttgtaggtattttatcgttgtatgatattaaattgggtgctgtgagtttgatcgcatattcaccctttacgtttt 32802781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 147
Target Start/End: Complemental strand, 65986 - 65843
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||| |||||||| |||||||||  ||| | ||| ||| |||  |||||||||||||||||||||| | |||||    
T  65986 gttttatcatattatttgtaggcattttgtcgttgtatgctattaacttgagtgttatgagtttgttcgcagattcaccctttacatttttaccgatgtt 65887  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||||| |||| | || |||| ||||||||||||| ||||    
T  65886 tgtatatgatgtactttttcaatttcaatgaatgaatattgttt 65843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0884 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0884
Description:

Target: scaffold0884; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 1 - 143
Target Start/End: Complemental strand, 1920 - 1778
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| |||||||| |||||||||||||||||||  ||| | ||| ||| |||  ||||||||||||||| |||||| | ||    
T  1920 taggttttatcatattatttgtaggcattttgctgttgtatgttattaacttgggtgttatgagtttgttcgcagattcaccctttacgtttttagcgat 1821  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||||||  ||||  | ||||||||||| ||||||||||||||    
T  1820 gtttgtacctgatgcattctatcgatttgaatgaatgaatatc 1778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 61; Significance: 2e-26; HSPs: 2)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 3 - 147
Target Start/End: Complemental strand, 9987 - 9843
Alignment:
Q  3 ggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgt 102  Q
    ||||||||||||||||||||| |||||||   ||| |||| |||| ||||  ||||||||| ||| |||  ||||||||||||||| |||||| | ||||    
T  9987 ggttttatcatattatttgtaggcatttttccgttttatgctattgacttgggtgctgtgagtttgttcgcagattcaccctttacgtttttagcgatgt 9888  T
Q  103 ttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||| || | |||||||||||||| ||||||||||||| ||||    
T  9887 ttgtatctggtgtactctatcgatttgaatgaatgaatattgttt 9843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 42
Target Start/End: Complemental strand, 34705 - 34668
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatg 42  Q
    ||||||||||||||||||| ||||||||||||||||||    
T  34705 ttttatcatattatttgtaggcattttgttgttgtatg 34668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 60; Significance: 1e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 4 - 143
Target Start/End: Complemental strand, 71814 - 71675
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtt 103  Q
    |||||||||||||||||||| ||||||||  |||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||| ||| || | |||||    
T  71814 gttttatcatattatttgtaggcattttgccgttgtatgctattaacttgggtgctgtgagtttgttcggagattcaccctttacgtttctagcgatgtt 71715  T
Q  104 tgtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    ||||| |||| ||||||||| |||| ||||| ||| ||||    
T  71714 tgtatctgatgtactctatcaatttgaatgactgagtatc 71675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0127 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 1 - 147
Target Start/End: Original strand, 15634 - 15780
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||  ||||||||| ||| |||  |||||||| |||||  |||||| | ||    
T  15634 taggttttatcatattatttgtaggcattttgccgttatatgctattaacttgggtgctgtgagtttgttcgcagattcactctttatgtttttagcgat 15733  T
Q  101 gtttgtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||||||  |||| ||||| |||||||| || |||| ||||||||||    
T  15734 gtttgtaactgatgtactcaatcgatttgaaggaataaatatcgttt 15780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 5 - 133
Target Start/End: Complemental strand, 32690 - 32562
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    ||||||||||||||||||| ||||||||| | |||||  |||||||||  ||| ||||| ||| |||  ||||||||||||||| |||||| | ||||||    
T  32690 ttttatcatattatttgtaggcattttgtcgctgtatactattaacttgagtgttgtgagtttgttcccagattcaccctttacgtttttagccatgttt 32591  T
Q  105 gtatatgatatactctatcgatttaaatg 133  Q
    |||| |||| |||||||||| ||| ||||    
T  32590 gtatctgatgtactctatcgttttgaatg 32562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0219 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0219
Description:

Target: scaffold0219; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 140
Target Start/End: Complemental strand, 14813 - 14679
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttg 105  Q
    |||||||||||||||||| |||||||| | || |||| |||||||||  ||||||||| ||| |||  | ||||| |||||| |||||||   |||||||    
T  14813 tttatcatattatttgtatgcattttgctattatatgctattaacttgggtgctgtgagtttgttcgcaaattcatcctttatatttttagtgatgtttg 14714  T
Q  106 tatatgatatactctatcgatttaaatgaatgaat 140  Q
    |||||||| |||| |||| |||| |||||||||||    
T  14713 tatatgatgtactttatcaatttgaatgaatgaat 14679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 5 - 147
Target Start/End: Complemental strand, 31217 - 31075
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||||||||||||| || ||||||||| ||||  || ||||| |||  ||||||||| ||| ||| | |||||| ||||||| |||| | | ||||||    
T  31217 ttttatcatattatttataggcattttgtcgttgcttgctattagcttgggtgctgtgagtttgttcgttgattcatcctttacgttttaagcgatgttt 31118  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
    |||| |||| |||| |||| |||| ||||||||||||||||||    
T  31117 gtatctgatgtactatatcaatttgaatgaatgaatatcgttt 31075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0445 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 1486 - 1613
Alignment:
Q  1 taggttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaat 100  Q
    ||||||||||||||||||||||| ||||||||  ||| |||| |||||||||   || ||||| ||| ||   ||||||||||||||| |||||| | ||    
T  1486 taggttttatcatattatttgtaggcattttgccgttttatgctattaacttggatgttgtgagtttgtttgcagattcaccctttacgtttttagcgat 1585  T
Q  101 gtttgtatatgatatactctatcgattt 128  Q
    |||||||| |||| ||||||||| ||||    
T  1586 gtttgtatctgatgtactctatcaattt 1613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 4 - 95
Target Start/End: Original strand, 50921 - 51012
Alignment:
Q  4 gttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacattttta 95  Q
    |||||||||||||||||||| ||||||||   ||||||| |||||||||  ||||||||| ||| |||  ||||||||||||||||||||||    
T  50921 gttttatcatattatttgtaggcattttgccattgtatgctattaacttgggtgctgtgagtttgttcgcagattcaccctttacattttta 51012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 5 - 143
Target Start/End: Complemental strand, 71243 - 71105
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgttt 104  Q
    |||||| |||||||||||| |||||||||||||||||| |||||||||  ||| ||| | ||| ||  |||||| | ||||||| |||||| | ||||||    
T  71243 ttttattatattatttgtaggcattttgttgttgtatgctattaacttgggtgttgtaagtttgtttgtagattaatcctttacgtttttagcgatgttt 71144  T
Q  105 gtatatgatatactctatcgatttaaatgaatgaatatc 143  Q
    |||| | ||  |||||||| | || ||||||||||||||    
T  71143 gtatttaattgactctatcaaattgaatgaatgaatatc 71105  T

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Target: scaffold0042 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 92439 - 92357
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 87  Q
    |||||||||||| |||||| |||||||||||||| ||  |||||||||  ||| ||||| ||| |||| ||||||||||||||    
T  92439 ttttatcatattgtttgtaggcattttgttgttgcatactattaacttaagtgatgtgagtttgttcaaagattcacccttta 92357  T

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Target: scaffold0603 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 153
Target Start/End: Original strand, 7862 - 8021
Alignment:
Q  6 tttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctt-tacatttttatcaatgt-- 102  Q
    |||||||||||||||||| | |||||| | |||||||||||||||||  ||| ||||| ||| |||  | |||||||||| ||| |||||| ||||||      
T  7862 tttatcatattatttgtagggattttgctattgtatgttattaacttgggtgttgtgagtttgttcgcatattcacccttgtacgtttttagcaatgtta 7961  T
Q  103 ---------ttgtatatgatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
             |||||| |||| ||||||||| |||| |||||||||||||||||| |||||    
T  7962 aacaagttattgtatttgatgtactctatcaatttgaatgaatgaatatcgttttttttt 8021  T

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Target: scaffold0039 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 5 - 93
Target Start/End: Original strand, 93253 - 93341
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 93  Q
    |||||||||||| |||||| ||||||||||||||| || |||||||||  ||||| |||  || |||| ||||||||| ||||| ||||    
T  93253 ttttatcatattgtttgtaggcattttgttgttgtgtgctattaacttgggtgctatgaacttgttcacagattcaccatttacgtttt 93341  T

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Target: scaffold0009 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 9 - 147
Target Start/End: Complemental strand, 58027 - 57890
Alignment:
Q  9 atcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttttatcaatgtttgtat 108  Q
    |||||||| |||||| ||||||||  ||| |||| |||||||||   |||||||| ||| |||  ||||| | ||||||| |||||| | |||||  | |    
T  58027 atcatattttttgtaggcattttgccgttatatgctattaacttggatgctgtgagtttgttcgcagatttatcctttacgtttttagcgatgttaat-t 57929  T
Q  109 atgatatactctatcgatttaaatgaatgaatatcgttt 147  Q
     |||| || |||||| |||||||||||||||||||||||    
T  57928 ctgatgtattctatcaatttaaatgaatgaatatcgttt 57890  T

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Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 19025 - 18938
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 93  Q
    ||||||||||||||||||| ||||||||  |||||||  |||||| ||| ||||| ||| ||| ||| || |||||||||||| |||||    
T  19025 ttttatcatattatttgtatgcattttgccgttgtatactattaa-tttggtgctatgaatttattcgtaaattcaccctttagatttt 18938  T

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Target: scaffold0056 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 115 - 167
Target Start/End: Original strand, 74593 - 74645
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttatttttatgagaaaaaatat 167  Q
    ||||||||| |||||||| |||||||||||||||||||| | | |||||||||    
T  74593 tactctatcaatttaaataaatgaatatcgtttatttttgtcaaaaaaaatat 74645  T

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Target: scaffold0536 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0536
Description:

Target: scaffold0536; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 3324 - 3362
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  3324 tactctatcaatttgaatgaatgaatatcgtttattttt 3362  T

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Target: scaffold0157 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 87
Target Start/End: Complemental strand, 27018 - 26936
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcacccttta 87  Q
    |||| ||||||||||||||  ||||||||| || |||| |||||||||  ||||||||| ||| ||| || ||||| ||||||    
T  27018 ttttctcatattatttgtagccattttgttattatatgctattaacttgcgtgctgtgagtttgttcgtatattcatccttta 26936  T

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Target: scaffold0155 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 153
Target Start/End: Original strand, 35504 - 35542
Alignment:
Q  115 tactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||| |||| ||||||||||||||||||||||||    
T  35504 tactctatcaatttgaatgaatgaatatcgtttattttt 35542  T

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Target: scaffold0090 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 111 - 153
Target Start/End: Complemental strand, 11264 - 11222
Alignment:
Q  111 gatatactctatcgatttaaatgaatgaatatcgtttattttt 153  Q
    ||||||||||||| |||||||||||| |||||| |||||||||    
T  11264 gatatactctatcaatttaaatgaattaatatcatttattttt 11222  T

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Target: scaffold0888 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0888
Description:

Target: scaffold0888; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 93
Target Start/End: Complemental strand, 1621 - 1533
Alignment:
Q  5 ttttatcatattatttgtaagcattttgttgttgtatgttattaacttttgtgctgtgacttttttcatagattcaccctttacatttt 93  Q
    ||||||||||||||||||| ||||||| | ||| |||| |||||| |||  || ||||| ||| |||  ||||||||||| ||| ||||    
T  1621 ttttatcatattatttgtaggcattttatcgttatatgctattaattttgatgatgtgagtttgttcgcagattcaccctatacgtttt 1533  T

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Target: scaffold0007 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 154
Target Start/End: Complemental strand, 201774 - 201730
Alignment:
Q  110 tgatatactctatcgatttaaatgaatgaatatcgtttattttta 154  Q
    |||| ||||||||| ||||||||||||| ||||| ||||||||||    
T  201774 tgatttactctatcaatttaaatgaatgtatatcatttattttta 201730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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