View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7721_low_19 (Length: 515)
Name: NF7721_low_19
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7721_low_19 |
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Alignment Details
Target: chr7 (Bit Score: 337; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 2 - 506
Target Start/End: Complemental strand, 7753930 - 7753457
Alignment:
| Q |
2 |
tagaagtgaacattttctaacacacacttgctatgccacgaaagattataagcatttgaaattggaataaccggcataatcatttttaagatttttaatc |
101 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
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| T |
7753930 |
tagaagtgaacattttctaacacacacttgctataccacgaaagattataagcatttgaaattggaataaccggcataatcatttt-aagatttttaatc |
7753832 |
T |
|
| Q |
102 |
ttgagagtaagttgtgttcaacgatggattaattttatatttatttgtgtttatataagtggagagtaaaaa-tgtataagctgaaattgacttctactt |
200 |
Q |
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||||||||||||||||||||| | | |||||||||||||| |||| ||||||||||| |||||||| |||||||||||||||||| |
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| T |
7753831 |
ttgagagtaagttgtgttcaaggtttgattaattttatat----------------aagtagagagtaaaaaatgtataagttgaaattgacttctactt |
7753748 |
T |
|
| Q |
201 |
ggtggttatctcatcgttacctttaaaatcacttatttcacctttaaaatgtataggcattgtttcaaacataagggtaactcggtgttacttacacaac |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
7753747 |
ggtggttatctcatcgttacctttaaaatcacttatttcacctttaaaatgtatagacattgtttcaaacgtaagggtaactcggtgttacttacacaac |
7753648 |
T |
|
| Q |
301 |
tatagtacattgacataattaacatcaataatctcaaatccattcaaatcagaaagttgtaatccattcacaaccaactcatttccttatttcagttttt |
400 |
Q |
| |
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||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
7753647 |
tatagtacattgacataattaacatcaataatctcaaatccatacaaatcagaaagtcgtaatccattcacaaccaactcatttccttatttcagttttt |
7753548 |
T |
|
| Q |
401 |
gcaaaatcaaataaccaagctaattgcccctctctaatcaagtgcaagctggtaatggtagaccacataaacacgtattgttagaaaactttgttggact |
500 |
Q |
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|| |||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
7753547 |
gc-aaatcaaataacca----aat----------taatcaagtgcaagctggtaatggtagaccacataaacacgtattgttagaaaactttgttggact |
7753463 |
T |
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