View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7721_low_24 (Length: 489)

Name: NF7721_low_24
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7721_low_24
NF7721_low_24
[»] chr7 (42 HSPs)
chr7 (9-472)||(32811698-32812155)
chr7 (310-449)||(41850593-41850733)
chr7 (312-449)||(28677328-28677466)
chr7 (312-425)||(36245412-36245525)
chr7 (328-425)||(8566117-8566214)
chr7 (309-425)||(2610183-2610299)
chr7 (313-425)||(10462377-10462489)
chr7 (311-425)||(2523806-2523920)
chr7 (311-425)||(30823707-30823821)
chr7 (312-449)||(32811389-32811526)
chr7 (310-410)||(29365672-29365772)
chr7 (346-425)||(48838345-48838424)
chr7 (309-449)||(39153298-39153437)
chr7 (328-425)||(30869222-30869319)
chr7 (312-425)||(10007612-10007725)
chr7 (312-425)||(40142809-40142922)
chr7 (312-424)||(9979838-9979949)
chr7 (312-372)||(13807241-13807301)
chr7 (330-418)||(28752118-28752206)
chr7 (310-381)||(32811375-32811446)
chr7 (330-425)||(45533247-45533342)
chr7 (328-425)||(6838392-6838487)
chr7 (328-449)||(11668026-11668148)
chr7 (311-425)||(44682564-44682678)
chr7 (21-98)||(32829599-32829676)
chr7 (308-368)||(3411425-3411485)
chr7 (312-372)||(27231922-27231982)
chr7 (329-425)||(45441472-45441568)
chr7 (311-369)||(23870977-23871035)
chr7 (328-449)||(31227508-31227629)
chr7 (351-425)||(47987188-47987262)
chr7 (348-425)||(2399988-2400065)
chr7 (311-372)||(4826760-4826821)
chr7 (308-381)||(4826841-4826914)
chr7 (311-368)||(12426528-12426585)
chr7 (328-372)||(4925906-4925950)
chr7 (243-287)||(7249065-7249109)
chr7 (240-280)||(16577875-16577915)
chr7 (240-280)||(16587747-16587787)
chr7 (310-425)||(24163265-24163381)
chr7 (331-419)||(34117981-34118069)
chr7 (240-280)||(34773237-34773277)
[»] chr8 (40 HSPs)
chr8 (309-449)||(7693044-7693185)
chr8 (328-449)||(10839778-10839899)
chr8 (328-449)||(16448800-16448922)
chr8 (310-425)||(10184587-10184702)
chr8 (328-425)||(15720214-15720311)
chr8 (312-450)||(5031463-5031602)
chr8 (320-410)||(15726810-15726900)
chr8 (328-425)||(8793734-8793831)
chr8 (328-425)||(34711096-34711193)
chr8 (308-368)||(39149626-39149686)
chr8 (318-425)||(8453631-8453737)
chr8 (312-425)||(3236331-3236442)
chr8 (312-449)||(35149679-35149817)
chr8 (308-424)||(1223118-1223234)
chr8 (337-425)||(42123002-42123090)
chr8 (307-449)||(36366036-36366178)
chr8 (307-361)||(35011206-35011260)
chr8 (346-419)||(13964457-13964530)
chr8 (312-425)||(24618994-24619106)
chr8 (328-425)||(32597534-32597631)
chr8 (328-410)||(883669-883751)
chr8 (323-369)||(6354739-6354785)
chr8 (310-376)||(43332557-43332623)
chr8 (319-372)||(12958782-12958835)
chr8 (350-410)||(36191798-36191856)
chr8 (328-425)||(40483319-40483416)
chr8 (308-372)||(6899415-6899479)
chr8 (347-419)||(27789313-27789385)
chr8 (311-449)||(8803226-8803365)
chr8 (238-293)||(37141350-37141405)
chr8 (319-449)||(44796348-44796478)
chr8 (240-290)||(10225321-10225371)
chr8 (311-361)||(24177970-24178020)
chr8 (308-362)||(24822822-24822876)
chr8 (310-368)||(40465235-40465293)
chr8 (312-357)||(22429534-22429579)
chr8 (319-372)||(24915258-24915311)
chr8 (309-381)||(12958855-12958927)
chr8 (328-372)||(42786379-42786423)
chr8 (309-369)||(43932141-43932201)
[»] chr2 (61 HSPs)
chr2 (328-449)||(11030203-11030325)
chr2 (311-425)||(41153147-41153261)
chr2 (337-449)||(11182176-11182289)
chr2 (328-449)||(12962720-12962842)
chr2 (318-435)||(20555263-20555380)
chr2 (308-425)||(33274006-33274123)
chr2 (311-442)||(12873721-12873853)
chr2 (306-425)||(5109356-5109475)
chr2 (306-449)||(11794443-11794586)
chr2 (318-449)||(38554469-38554601)
chr2 (311-425)||(9152415-9152529)
chr2 (306-425)||(7943475-7943595)
chr2 (311-425)||(22333561-22333675)
chr2 (312-410)||(34447554-34447652)
chr2 (328-449)||(38983010-38983132)
chr2 (328-425)||(29988907-29989004)
chr2 (328-425)||(32457249-32457346)
chr2 (328-421)||(33824365-33824458)
chr2 (348-424)||(10204961-10205037)
chr2 (308-426)||(4410812-4410931)
chr2 (312-372)||(42698153-42698213)
chr2 (312-372)||(45571029-45571089)
chr2 (312-372)||(45574696-45574756)
chr2 (312-372)||(45578363-45578423)
chr2 (312-372)||(45582030-45582090)
chr2 (312-372)||(45585697-45585757)
chr2 (312-372)||(45589364-45589424)
chr2 (312-372)||(45593031-45593091)
chr2 (312-372)||(45596698-45596758)
chr2 (312-372)||(45600365-45600425)
chr2 (312-372)||(45604032-45604092)
chr2 (312-372)||(45607699-45607759)
chr2 (312-372)||(45611366-45611426)
chr2 (312-372)||(45615033-45615093)
chr2 (347-425)||(3837446-3837524)
chr2 (319-425)||(5281214-5281319)
chr2 (310-372)||(45034395-45034457)
chr2 (328-425)||(28248969-28249066)
chr2 (328-425)||(29169872-29169968)
chr2 (328-425)||(30758756-30758852)
chr2 (348-425)||(39118049-39118126)
chr2 (312-425)||(43714010-43714122)
chr2 (328-372)||(4063287-4063331)
chr2 (328-372)||(5559378-5559422)
chr2 (304-368)||(42263461-42263525)
chr2 (331-390)||(7833300-7833359)
chr2 (311-449)||(2936289-2936430)
chr2 (240-290)||(10735846-10735896)
chr2 (311-381)||(12486072-12486142)
chr2 (240-290)||(24592861-24592911)
chr2 (240-290)||(26999106-26999156)
chr2 (327-372)||(15384441-15384486)
chr2 (348-425)||(35728501-35728578)
chr2 (312-369)||(36881532-36881589)
chr2 (322-371)||(43135041-43135089)
chr2 (338-418)||(2544372-2544452)
chr2 (239-283)||(8920491-8920535)
chr2 (328-376)||(9121275-9121323)
chr2 (238-290)||(22523025-22523077)
chr2 (312-372)||(39444994-39445054)
chr2 (311-363)||(43713972-43714024)
[»] chr5 (36 HSPs)
chr5 (312-449)||(38394427-38394565)
chr5 (310-430)||(14913137-14913257)
chr5 (311-419)||(29299355-29299463)
chr5 (312-425)||(11931968-11932082)
chr5 (328-425)||(36434714-36434811)
chr5 (349-425)||(919678-919754)
chr5 (328-411)||(8235427-8235510)
chr5 (311-449)||(13789743-13789882)
chr5 (311-449)||(33478103-33478244)
chr5 (312-425)||(21488319-21488432)
chr5 (328-425)||(22101923-22102020)
chr5 (317-449)||(27488351-27488483)
chr5 (318-449)||(5002151-5002283)
chr5 (315-449)||(18473477-18473612)
chr5 (311-425)||(34297210-34297327)
chr5 (312-449)||(15968310-15968447)
chr5 (311-361)||(22731358-22731408)
chr5 (346-443)||(24089055-24089153)
chr5 (308-361)||(1015255-1015308)
chr5 (312-361)||(1138317-1138366)
chr5 (312-361)||(29031136-29031185)
chr5 (305-376)||(14723375-14723449)
chr5 (311-363)||(28499776-28499828)
chr5 (324-372)||(35349502-35349550)
chr5 (311-410)||(3814022-3814121)
chr5 (313-372)||(11142452-11142511)
chr5 (239-290)||(21636338-21636389)
chr5 (239-290)||(21644585-21644636)
chr5 (328-419)||(35922055-35922145)
chr5 (328-426)||(32902803-32902901)
chr5 (307-368)||(21610295-21610356)
chr5 (348-425)||(36286095-36286172)
chr5 (309-381)||(7945833-7945905)
chr5 (330-425)||(19295993-19296089)
chr5 (309-372)||(26327531-26327595)
chr5 (312-372)||(38978831-38978891)
[»] chr4 (53 HSPs)
chr4 (308-449)||(48361047-48361189)
chr4 (311-435)||(53225669-53225794)
chr4 (315-425)||(45828451-45828561)
chr4 (328-425)||(30191911-30192008)
chr4 (328-425)||(43117890-43117987)
chr4 (312-425)||(8347644-8347757)
chr4 (323-447)||(21554122-21554246)
chr4 (314-442)||(47943728-47943857)
chr4 (311-410)||(14859703-14859802)
chr4 (311-449)||(48195888-48196027)
chr4 (328-410)||(16412249-16412331)
chr4 (312-449)||(44111756-44111894)
chr4 (317-425)||(41116566-41116673)
chr4 (311-449)||(25477556-25477695)
chr4 (310-425)||(42169079-42169194)
chr4 (319-449)||(42670770-42670901)
chr4 (311-442)||(3162893-3163025)
chr4 (321-425)||(33010682-33010786)
chr4 (328-425)||(36132671-36132768)
chr4 (311-449)||(55190678-55190816)
chr4 (311-425)||(4386134-4386248)
chr4 (310-372)||(20745420-20745482)
chr4 (303-369)||(24100749-24100815)
chr4 (310-372)||(47866033-47866095)
chr4 (328-425)||(3043807-3043903)
chr4 (311-372)||(20459329-20459390)
chr4 (328-410)||(31977795-31977879)
chr4 (308-369)||(36196457-36196518)
chr4 (311-372)||(42804254-42804315)
chr4 (312-376)||(8826775-8826839)
chr4 (378-449)||(19150788-19150860)
chr4 (240-288)||(21623434-21623482)
chr4 (348-431)||(42183186-42183270)
chr4 (316-372)||(43020759-43020815)
chr4 (312-368)||(52535950-52536006)
chr4 (346-425)||(9044423-9044502)
chr4 (315-425)||(696386-696496)
chr4 (315-425)||(764684-764794)
chr4 (312-421)||(2583122-2583231)
chr4 (240-289)||(4485848-4485897)
chr4 (348-432)||(17659489-17659574)
chr4 (312-369)||(19150657-19150714)
chr4 (311-368)||(19485665-19485722)
chr4 (348-425)||(25700488-25700565)
chr4 (311-435)||(29686425-29686550)
chr4 (328-425)||(53658400-53658497)
chr4 (310-362)||(1205181-1205233)
chr4 (238-290)||(3251340-3251392)
chr4 (312-372)||(4418186-4418246)
chr4 (242-290)||(8494983-8495031)
chr4 (242-290)||(10082398-10082446)
chr4 (328-404)||(23226965-23227041)
chr4 (312-372)||(52136698-52136758)
[»] chr3 (39 HSPs)
chr3 (312-425)||(43448957-43449070)
chr3 (309-425)||(21662882-21662998)
chr3 (310-425)||(12747733-12747848)
chr3 (311-425)||(51723376-51723490)
chr3 (311-425)||(44518034-44518148)
chr3 (312-449)||(53441918-53442056)
chr3 (329-435)||(12064934-12065041)
chr3 (311-425)||(45010786-45010900)
chr3 (328-425)||(23222994-23223090)
chr3 (318-425)||(9236091-9236199)
chr3 (313-425)||(19649615-19649727)
chr3 (310-425)||(54537440-54537555)
chr3 (328-425)||(52864966-52865063)
chr3 (328-411)||(40460360-40460444)
chr3 (312-372)||(49885378-49885438)
chr3 (312-449)||(51516957-51517094)
chr3 (343-449)||(8266263-8266368)
chr3 (312-368)||(42225561-42225617)
chr3 (317-372)||(5177854-5177909)
chr3 (307-366)||(50561048-50561107)
chr3 (328-442)||(20028489-20028602)
chr3 (328-410)||(28043417-28043499)
chr3 (312-425)||(36985155-36985268)
chr3 (312-425)||(37010594-37010707)
chr3 (238-289)||(1744003-1744054)
chr3 (310-369)||(48593234-48593293)
chr3 (331-425)||(27707192-27707286)
chr3 (319-425)||(35099091-35099197)
chr3 (240-290)||(35863828-35863878)
chr3 (339-425)||(40326470-40326556)
chr3 (311-369)||(50354266-50354323)
chr3 (328-425)||(8987744-8987841)
chr3 (319-368)||(23920630-23920679)
chr3 (240-281)||(27185482-27185523)
chr3 (237-281)||(759606-759650)
chr3 (238-290)||(10926465-10926517)
chr3 (337-425)||(25954058-25954146)
chr3 (309-369)||(28406463-28406523)
chr3 (312-372)||(33371860-33371920)
[»] chr1 (44 HSPs)
chr1 (309-449)||(26760184-26760325)
chr1 (310-425)||(50155334-50155449)
chr1 (328-449)||(38737942-38738064)
chr1 (319-425)||(49944839-49944945)
chr1 (309-449)||(26924209-26924350)
chr1 (312-425)||(29256635-29256747)
chr1 (337-425)||(38590102-38590190)
chr1 (311-449)||(44939077-44939216)
chr1 (329-449)||(11386170-11386291)
chr1 (319-449)||(519844-519975)
chr1 (312-449)||(34332475-34332613)
chr1 (328-430)||(23923565-23923668)
chr1 (312-449)||(38040287-38040425)
chr1 (312-435)||(26070823-26070947)
chr1 (311-425)||(640520-640633)
chr1 (328-410)||(24305716-24305798)
chr1 (333-425)||(15342957-15343049)
chr1 (322-425)||(34146841-34146943)
chr1 (347-425)||(6661548-6661626)
chr1 (328-406)||(7375524-7375602)
chr1 (328-369)||(8971243-8971284)
chr1 (312-381)||(29892210-29892279)
chr1 (308-369)||(37515182-37515243)
chr1 (311-372)||(43929434-43929495)
chr1 (328-435)||(6793609-6793717)
chr1 (309-369)||(34890274-34890334)
chr1 (341-425)||(37178938-37179022)
chr1 (312-376)||(47844618-47844682)
chr1 (328-435)||(47883978-47884085)
chr1 (312-362)||(2351132-2351182)
chr1 (311-369)||(5368862-5368920)
chr1 (240-290)||(8269383-8269433)
chr1 (328-425)||(27819347-27819445)
chr1 (237-283)||(32075256-32075302)
chr1 (238-288)||(45190282-45190332)
chr1 (307-403)||(5891784-5891883)
chr1 (311-368)||(10065253-10065310)
chr1 (311-372)||(47678344-47678405)
chr1 (242-290)||(4302448-4302496)
chr1 (309-369)||(15699460-15699520)
chr1 (309-381)||(26924293-26924365)
chr1 (238-290)||(27533239-27533291)
chr1 (311-409)||(28038819-28038919)
chr1 (312-372)||(34662681-34662741)
[»] chr6 (25 HSPs)
chr6 (318-425)||(10283330-10283437)
chr6 (328-435)||(30627838-30627946)
chr6 (311-449)||(3064881-3065020)
chr6 (310-425)||(12999791-12999907)
chr6 (311-410)||(2230400-2230499)
chr6 (328-449)||(17265732-17265854)
chr6 (314-449)||(28630754-28630890)
chr6 (310-425)||(2972161-2972276)
chr6 (328-419)||(7649814-7649905)
chr6 (309-372)||(8646767-8646830)
chr6 (307-372)||(2810073-2810138)
chr6 (330-423)||(28863337-28863430)
chr6 (312-372)||(1837048-1837108)
chr6 (241-281)||(14917791-14917831)
chr6 (311-419)||(16121003-16121111)
chr6 (328-449)||(33119915-33120035)
chr6 (311-425)||(30895182-30895296)
chr6 (240-290)||(34701143-34701193)
chr6 (240-281)||(8637452-8637493)
chr6 (240-281)||(21847199-21847240)
chr6 (310-362)||(4143772-4143824)
chr6 (238-290)||(5655320-5655372)
chr6 (328-425)||(7649835-7649934)
chr6 (308-368)||(24949626-24949686)
chr6 (337-377)||(25538006-25538046)
[»] scaffold0110 (1 HSPs)
scaffold0110 (308-372)||(1621-1685)
[»] scaffold0070 (1 HSPs)
scaffold0070 (308-425)||(40140-40258)
[»] scaffold0001 (1 HSPs)
scaffold0001 (310-449)||(156779-156919)
[»] scaffold0028 (2 HSPs)
scaffold0028 (311-425)||(71885-72000)
scaffold0028 (312-362)||(71848-71898)
[»] scaffold0136 (1 HSPs)
scaffold0136 (328-425)||(16544-16641)
[»] scaffold0123 (1 HSPs)
scaffold0123 (312-421)||(28129-28238)
[»] scaffold0236 (1 HSPs)
scaffold0236 (310-425)||(16687-16799)
[»] scaffold0002 (1 HSPs)
scaffold0002 (304-368)||(492296-492360)
[»] scaffold1266 (1 HSPs)
scaffold1266 (348-425)||(162-239)
[»] scaffold0263 (1 HSPs)
scaffold0263 (348-425)||(19824-19901)
[»] scaffold0242 (1 HSPs)
scaffold0242 (311-372)||(16505-16566)


Alignment Details
Target: chr7 (Bit Score: 282; Significance: 1e-158; HSPs: 42)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 9 - 472
Target Start/End: Complemental strand, 32812155 - 32811698
Alignment:
Q  9 tgtcgaagaatattttgaggctatgcccatcaatggctgcatggcttcttgtgatgccaaatgcgaaaccaccacacttgaaggatgttacctatcaaag 108  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32812155 tgtctaagaatattttgaggctatgcccatcaatggctgcatggcttcttgtgatgccaaatgcgaaaccaccacacttgaaggatgttacctatcaaag 32812056  T
Q  109 caaatcagtaataacattagtttctagtgtataactaatgttaatttgaatcaattaatacattattgaatatattttcgtttcaaccagggaatttaat 208  Q
    |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||   |||||||||||||||||||||||| |||| ||    
T  32812055 caaatcagtaataacattagtttctagtatataactaaagttaatttgaatcaattaatacatta---aatatattttcgtttcaaccaggg-attttat 32811960  T
Q  209 atctatcta---nnnnnnnggtagccgg-gtttgaacc-ttgcatatactatgtatcgtccctaccaactgaactaagtttacgagggcatcaacattag 303  Q
    |||||||||          ||||| ||| ||||||||| |||||||       ||||||| ||||||||||| ||||| ||||||||||||||| | |||    
T  32811959 atctatctattttttttgtggtagtcggagtttgaacctttgcata-------tatcgtcactaccaactgagctaagcttacgagggcatcaataatag 32811867  T
Q  304 taatataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacat 403  Q
    |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| |||||||||||    
T  32811866 taatataatactcccttcggtccaatttataagaaaaaattaattttttagattcattgagtaattgatttatatggtatagaatatggaccaaatacat 32811767  T
Q  404 catttatagaatgaatcaaaaagtaaaatgttgtttatatataggagggagtaatagtactaacatatt 472  Q
    ||||||| |||| ||| ||||||| |||| ||| ||||||||||||||||||| |||||||||||||||    
T  32811766 catttatggaattaataaaaaagtcaaatattgcttatatataggagggagtactagtactaacatatt 32811698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 310 - 449
Target Start/End: Original strand, 41850593 - 41850733
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    |||||||||| || ||  |||||||||||||| ||||||||||||||||||||| ||||| || ||| |||||||||||||  | |||||||||||||||    
T  41850593 aatactccctacggtcttatttataagaaaaagttaattttttagattcattgaataattaatgtatttggtataaaatatagagcaaatacatcattta 41850692  T
Q  410 tagaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
    |  |||||||| |||||||||||||||  ||||| ||||||    
T  41850693 tgcaatgaatcaaaaaagtaaaatgtttcttataaatagga 41850733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 312 - 449
Target Start/End: Complemental strand, 28677466 - 28677328
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||| |||||||||||||| ||| | || || |||||  ||||||||||||||||||     
T  28677466 tactccctccgatcctatttataagaaaaaattgactttttagatttattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatg 28677367  T
Q  412 gaatgaatca-aaaagtaaaatgttgtttatatatagga 449  Q
     ||||||||| |||||| |||||||  ||||| ||||||    
T  28677366 caatgaatcaaaaaagtcaaatgtttcttataaatagga 28677328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 312 - 425
Target Start/End: Complemental strand, 36245525 - 36245412
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||  ||| ||||||||||||||||| | ||||||||||||||||||||||||| ||| | || || |||||  ||||||||||||||||||     
T  36245525 tactccctcctgtcctatttataagaaaaaattgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatg 36245426  T
Q  412 gaatgaatcaaaaa 425  Q
     |||||||||||||    
T  36245425 caatgaatcaaaaa 36245412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 8566214 - 8566117
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| || ||||||||||||||||||||||||||| ||| | || || |||||  ||||||||||||||||||  |||||||||||||    
T  8566214 atttataagaaaaatttgattttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaa 8566117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 309 - 425
Target Start/End: Original strand, 2610183 - 2610299
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    ||||| || ||||| ||| |||||||||||||| || |||||||| |||||||||||||||||| ||| |||| || |||||  || |||||||||||||    
T  2610183 taatattctctccggtccgatttataagaaaaatttgattttttaaattcattgagtaattgatgtatttggtctagaatatagactaaatacatcattt 2610282  T
Q  409 atagaatgaatcaaaaa 425  Q
    ||  ||||||| |||||    
T  2610283 atgcaatgaattaaaaa 2610299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 313 - 425
Target Start/End: Original strand, 10462377 - 10462489
Alignment:
Q  313 actccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatag 412  Q
    |||||||||||||  ||||||||||||||  | | |||||||||||||||||| |||||| ||| | || ||||||||  ||||||||||||||||||      
T  10462377 actccctccgatcttatttataagaaaaatgtgactttttagattcattgagtgattgatgtatcttgtctaaaatatataccaaatacatcatttatgc 10462476  T
Q  413 aatgaatcaaaaa 425  Q
    ||||||| |||||    
T  10462477 aatgaataaaaaa 10462489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 2523920 - 2523806
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||| ||| |||||||||||||| || | |||||||||||||||||||||| || ||  ||| ||| |||||  |||| ||||||| |||||    
T  2523920 atactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggcatagaatatagaccagatacatcgtttat 2523821  T
Q  411 agaatgaatcaaaaa 425  Q
      |||||||||||||    
T  2523820 gcaatgaatcaaaaa 2523806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 425
Target Start/End: Original strand, 30823707 - 30823821
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||| |||||| | |||||||||||||  || | ||||||||||||||||| |||| || ||| ||||||| |||||  ||||||||||| ||||||    
T  30823707 atactccatccgattctatttataagaaaattttgactttttagattcattgagaaattaatgtatttggtatagaatatagaccaaatacattatttat 30823806  T
Q  411 agaatgaatcaaaaa 425  Q
    | ||||||| |||||    
T  30823807 ataatgaataaaaaa 30823821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 449
Target Start/End: Complemental strand, 32811526 - 32811389
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||| |||||||||||||| ||||||||||||||||||| |||||||||| ||  | |  || || ||  ||||||||||||| ||||     
T  32811526 tactccctccggtcctatttataagaaaaagttaattttttagattcattcagtaattgatgtacctagcctagaa-atagaccaaatacatcaattatt 32811428  T
Q  412 gaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
     |||||||| |||||||||| ||||  ||||||||||||    
T  32811427 caatgaatcaaaaaagtaaattgtttcttatatatagga 32811389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 310 - 410
Target Start/End: Complemental strand, 29365772 - 29365672
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    |||||||||||   ||| || |||||||||||||| | |||||||||||||||||||||| || ||| ||||||| |||||  | |||||||||||||||    
T  29365772 aatactccctctagtcctatatataagaaaaaattgactttttagattcattgagtaattaatgtatttggtatagaatatagatcaaatacatcattta 29365673  T
Q  410 t 410  Q
    |    
T  29365672 t 29365672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 346 - 425
Target Start/End: Original strand, 48838345 - 48838424
Alignment:
Q  346 attttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||||||||||||| |||| || ||| |||||||||||||  ||||||||||||||||||  ||||||| |||||    
T  48838345 attttttagattcattgagcaattaatgtatttggtataaaatatagaccaaatacatcatttatgtaatgaattaaaaa 48838424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 309 - 449
Target Start/End: Complemental strand, 39153437 - 39153298
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    ||||||||||| || ||  ||||||||  ||||||| | ||||||| ||||||||||||||||| ||| |||| || |||||  || |||||||||||||    
T  39153437 taatactcccttcggtcttatttataa--aaaaattgactttttagcttcattgagtaattgatgtatttggtctataatatagactaaatacatcattt 39153340  T
Q  409 atagaatgaatca-aaaagtaaaatgttgtttatatatagga 449  Q
    ||  ||||||||| |||||| |||||||  ||||| ||||||    
T  39153339 atgcaatgaatcaaaaaagtcaaatgtttcttataaatagga 39153298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 30869319 - 30869222
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||  || | ||||||||||||||||||||||||| ||| | || || |||||  ||||||||||| ||||||| ||| |||||||||    
T  30869319 atttataagaaaattttgactttttagattcattgagtaattgatgtatcttgtctagaatatagaccaaatacattatttatacaataaatcaaaaa 30869222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 425
Target Start/End: Complemental strand, 10007725 - 10007612
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||| |||||||||||||| || | |||||||||||||||  ||||| || ||| | || || |||||  ||||||||||| ||||||     
T  10007725 tactccctccggtcctatttataagaaaaagttgactttttagattcattgtataattaatgtatcttgtgtagaatatagaccaaatacataatttatg 10007626  T
Q  412 gaatgaatcaaaaa 425  Q
     ||||||| |||||    
T  10007625 aaatgaataaaaaa 10007612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 425
Target Start/End: Complemental strand, 40142922 - 40142809
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||| || |||||||||||||| |||||||||||| ||||  ||||| || ||| | || ||  ||||  ||||||||||| ||||||     
T  40142922 tactccctccggtcctatgtataagaaaaaattgattttttagatttattgtataattaatgtatcttgtttaggatatagaccaaatacattatttatg 40142823  T
Q  412 gaatgaatcaaaaa 425  Q
     |||||||||||||    
T  40142822 caatgaatcaaaaa 40142809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 424
Target Start/End: Complemental strand, 9979949 - 9979838
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||||||||||| |  |||||||||||||| || | |||||||||| ||||||||||| || ||| | || || |||||  || |||||||||||||||     
T  9979949 tactccctccgaacttatttataagaaaaatttgactttttagatttattgagtaattcatgtatcttgtctagaatattgactaaatacatcatttat- 9979851  T
Q  412 gaatgaatcaaaa 424  Q
    |||| ||||||||    
T  9979850 gaataaatcaaaa 9979838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 13807241 - 13807301
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||||||||| ||  |||||||||||||| || | |||||||||||||||||||||||||    
T  13807241 tactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgat 13807301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 330 - 418
Target Start/End: Complemental strand, 28752206 - 28752118
Alignment:
Q  330 ttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaa 418  Q
    ||||||| |||||||||||||||| ||||||| | ||| |||||||| ||||  | |||||  |||||||||||||||||  |||||||    
T  28752206 ttataagcaaaaattaattttttacattcattcattaaatgatatatttggtcaataatatagaccaaatacatcatttaatgaatgaa 28752118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 381
Target Start/End: Original strand, 32811375 - 32811446
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggt 381  Q
    ||||||||||||||||| || ||||||||| |||| | ||||| |||||||||| |||||||| ||| ||||    
T  32811375 aatactccctccgatcctatatataagaaacaatttacttttttgattcattgaataattgatgtatttggt 32811446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 330 - 425
Target Start/End: Original strand, 45533247 - 45533342
Alignment:
Q  330 ttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||||||||| | ||||||||||||||  |||||| || ||| | || || |||||  ||||||||||| ||||||| ||||||| |||||    
T  45533247 ttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctagaatatagaccaaatacattatttatacaatgaattaaaaa 45533342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 6838392 - 6838487
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| ||  |||||  |||||||||||||||| || ||| | || || |||||  ||||||||||||||||||  |||||||||||||    
T  6838392 atttataagaaaaatttggttttt--gattcattgagtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaa 6838487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 449
Target Start/End: Complemental strand, 11668148 - 11668026
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaag 426  Q
    |||||||||||||| || | |||||| ||||||||| |||||||| ||| | || || |||||  | |||||| |||||||||  ||||||||| |||||    
T  11668148 atttataagaaaaatttgactttttacattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatgcaatgaatcaaaaaag 11668049  T
Q  427 taaaatgttgtttatatatagga 449  Q
    | |||||||  ||||| ||||||    
T  11668048 tcaaatgtttcttataaatagga 11668026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 425
Target Start/End: Original strand, 44682564 - 44682678
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||| ||||| ||| |||||||||||||| || | |||| ||||||||| ||||| |||| ||| | || || | |||  |||||||| |||||||||    
T  44682564 atactctctccggtcctatttataagaaaaatttgacttttgagattcattaagtaactgatgtattttgtctagattatagaccaaatatatcatttat 44682663  T
Q  411 agaatgaatcaaaaa 425  Q
      |||||||||||||    
T  44682664 gcaatgaatcaaaaa 44682678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 21 - 98
Target Start/End: Complemental strand, 32829676 - 32829599
Alignment:
Q  21 ttttgaggctatgcccatcaatggctgcatggcttcttgtgatgccaaatgcgaaaccaccacacttgaaggatgtta 98  Q
    |||||| |||| | ||||||| || | |||||||| |||||| ||| |  ||||||||||||||||||||||||||||    
T  32829676 ttttgaagctaagtccatcaaaggttacatggcttgttgtgaagcctatagcgaaaccaccacacttgaaggatgtta 32829599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 3411485 - 3411425
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    ||||||||||||||||||| |||||||||| ||| || | ||||||||| |||||| ||||    
T  3411485 ataatactccctccgatcctatttataagagaaatttgactttttagatacattgaataat 3411425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 27231982 - 27231922
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| |||||||||||||| |||| |||||||||||||| | ||||||||    
T  27231982 tactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgat 27231922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 329 - 425
Target Start/End: Complemental strand, 45441568 - 45441472
Alignment:
Q  329 tttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||| |||||||||| |||||||||||| ||| |||||| | ||| | || || |||||  | |||||||||||| |||| ||| |||||||||    
T  45441568 tttataaaaaaaaattaactttttagattcaatgaataattggtgtatcttgtctagaatatagatcaaatacatcatctatacaataaatcaaaaa 45441472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 23870977 - 23871035
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    |||||||||||||||  |||||||||||||| || ||||||| ||| |||||| |||||    
T  23870977 atactccctccgatcttatttataagaaaaatttgattttttcgatacattgaataatt 23871035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 449
Target Start/End: Original strand, 31227508 - 31227629
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatc-aaaaag 426  Q
    |||||||||||||| ||||||||||||||||||| | || ||||| ||| | |  || || ||  |||||||||||||  |||  |||||||| ||||||    
T  31227508 atttataagaaaaagttaattttttagattcattcaatagttgatgtatttagcctagaa-atagaccaaatacatcaactattcaatgaatcaaaaaag 31227606  T
Q  427 taaaatgttgtttatatatagga 449  Q
    |||| ||||  ||||||||||||    
T  31227607 taaattgtttcttatatatagga 31227629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 351 - 425
Target Start/End: Original strand, 47987188 - 47987262
Alignment:
Q  351 ttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||| ||||| |||||||||||| | || || | ||| |||||||||||||||||||  ||||||| |||||    
T  47987188 ttagattaattgaataattgatatatcttgtttagagtataaaccaaatacatcatttatgcaatgaattaaaaa 47987262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 2400065 - 2399988
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||| ||| |||| |||||||| ||| | || ||||||||  |  |||||||||||||||| |||||||||||||    
T  2400065 tttttaggttcgttgaataattgatgtatctagtctaaaatatagattaaatacatcatttatacaatgaatcaaaaa 2399988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 372
Target Start/End: Original strand, 4826760 - 4826821
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||| |||||  ||| |||||||||||||| |||| |||||||||||||| | ||||||||    
T  4826760 atactacctccagtcctatttataagaaaaagttaactttttagattcattcaataattgat 4826821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 308 - 381
Target Start/End: Complemental strand, 4826914 - 4826841
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggt 381  Q
    ||||||||||||||| ||| || ||||||||| |||| | ||||| |||||||||| || ||||| ||| ||||    
T  4826914 ataatactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggt 4826841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 12426528 - 12426585
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    |||||||||||| ||  |||||||||| ||| |||||||||||||| |||||| ||||    
T  12426528 atactccctccggtcttatttataagagaaagttaattttttagatacattgaataat 12426585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 4925906 - 4925950
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||||||||| || | |||||||||||||| ||||||||||    
T  4925906 atttataagaaaaatttgactttttagattcattaagtaattgat 4925950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 243 - 287
Target Start/End: Original strand, 7249065 - 7249109
Alignment:
Q  243 ttgcatatactatgtatcgtccctaccaactgaactaagtttacg 287  Q
    ||||||||| ||||||| |||| |||||||||| |||||||||||    
T  7249065 ttgcatatattatgtattgtccttaccaactgatctaagtttacg 7249109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 280
Target Start/End: Original strand, 16577875 - 16577915
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaa 280  Q
    |||||||||||| ||||||| ||||||||||||||| ||||    
T  16577875 accttgcatatattatgtattgtccctaccaactgagctaa 16577915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 16587787 - 16587747
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaa 280  Q
    |||||||||||| ||||||| ||||||||||||||| ||||    
T  16587787 accttgcatatattatgtattgtccctaccaactgagctaa 16587747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 425
Target Start/End: Original strand, 24163265 - 24163381
Alignment:
Q  310 aatactccctccgatccaatttataag-aaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    ||||||||||||| ||| ||||||| | |||||||| | |||||||||||||||  ||||| || ||| | |  || |||||  |||| |||||||||||    
T  24163265 aatactccctccggtcctatttataggaaaaaaatttactttttagattcattgtataattaatgtatcttgcgtagaatatagaccatatacatcattt 24163364  T
Q  409 atagaatgaatcaaaaa 425  Q
    ||  ||||||| |||||    
T  24163365 atgcaatgaattaaaaa 24163381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 331 - 419
Target Start/End: Complemental strand, 34118069 - 34117981
Alignment:
Q  331 tataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaat 419  Q
    ||||||||||| || | |||||| |||||||| |||||| || ||| | || || |||||  ||||||||||||||||||  |||||||    
T  34118069 tataagaaaaagttgactttttaaattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaat 34117981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 240 - 280
Target Start/End: Complemental strand, 34773277 - 34773237
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaa 280  Q
    |||||||||||| |||| || ||||||||||||||||||||    
T  34773277 accttgcatatattatgcattgtccctaccaactgaactaa 34773237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 309 - 449
Target Start/End: Complemental strand, 7693185 - 7693044
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    ||||||||| |||| ||| ||||||||||||||||| | |||||||||||||||||||||| || ||| |||||||||||||  || |||||||||||||    
T  7693185 taatactccttccggtcctatttataagaaaaaattgactttttagattcattgagtaattaatgtatttggtataaaatatagactaaatacatcattt 7693086  T
Q  409 atagaatgaatca-aaaagtaaaatgttgtttatatatagga 449  Q
    ||  ||||||||| ||||||||||||||  ||||| ||||||    
T  7693085 atgcaatgaatcaaaaaagtaaaatgtttcttataaatagga 7693044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 449
Target Start/End: Original strand, 10839778 - 10839899
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaagt 427  Q
    ||||||||||||||||| | |||||||||||||||| ||||| || ||  ||||||| |||||  ||||||||||||||||||  |||||||||||||||    
T  10839778 atttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatatagaccaaatacatcatttatgcaatgaatcaaaaagt 10839877  T
Q  428 aaaatgttgtttatatatagga 449  Q
     |||||||  ||||| ||||||    
T  10839878 taaatgtttcttataaatagga 10839899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 449
Target Start/End: Complemental strand, 16448922 - 16448800
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaag 426  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||| |  |||| ||||| ||||||||| |||||||||  ||||||||| |||||    
T  16448922 atttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatatagaatataaaccaaatatatcatttatgcaatgaatcaaaaaag 16448823  T
Q  427 taaaatgttgtttatatatagga 449  Q
    | |||||||  ||||| ||||||    
T  16448822 tcaaatgtttcttataaatagga 16448800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 310 - 425
Target Start/End: Complemental strand, 10184702 - 10184587
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    |||||| |||||||||  ||||||||||||||||  | |||||||||||||||| |||||||| |||||| |  | |||||  |||||||||||||||||    
T  10184702 aatacttcctccgatcatatttataagaaaaaatcgactttttagattcattgaataattgatgtatatgatccagaatatagaccaaatacatcattta 10184603  T
Q  410 tagaatgaatcaaaaa 425  Q
    || ||||||| |||||    
T  10184602 tacaatgaataaaaaa 10184587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 15720214 - 15720311
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||||||||||||| |||||||| | || ||||||||||| ||| || ||||||||||  | ||||||||| |||||| ||||||||||||||    
T  15720214 atttataagaaaaaattaactttttagacttatagagtaattgatgtatttgttataaaatatagatcaaatacattatttatggaatgaatcaaaaa 15720311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 312 - 450
Target Start/End: Original strand, 5031463 - 5031602
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||| |||||| ||| |||||||||||||| |||| |||||| ||||||| |||||||||| ||| | || || |||||  || |||||||||||||||     
T  5031463 tacttcctccggtcctatttataagaaaaatttaactttttaaattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatg 5031562  T
Q  412 gaatgaatc-aaaaagtaaaatgttgtttatatataggag 450  Q
     |||||||| ||||||| |||||||  ||||| |||||||    
T  5031563 caatgaatcaaaaaagtcaaatgtttcttataaataggag 5031602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 410
Target Start/End: Complemental strand, 15726900 - 15726810
Alignment:
Q  320 ccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||| ||||||||||||||||| | ||||||||||||||||||||||||  ||| | || ||||||||  || |||||||||||||||    
T  15726900 ccgatcctatttataagaaaaaattgactttttagattcattgagtaattgacttatcttgtttaaaatatatacaaaatacatcatttat 15726810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 8793734 - 8793831
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||| |||| || || |||||||||||||||||||||||| ||| |||| || |||||  || |||||||||||||||  |||||||||||||    
T  8793734 atttataagtaaaagttgatattttagattcattgagtaattgatgtatttggtctataatatagactaaatacatcatttatgcaatgaatcaaaaa 8793831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 34711096 - 34711193
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||| |||||||| | ||||||||||||||||||||||||| ||| | || |||||||| ||| |||||||||||| ||  ||| |||||||||    
T  34711096 atttataaaaaaaaattgactttttagattcattgagtaattgatgtattttgtctaaaatataaactaaatacatcattaatgcaataaatcaaaaa 34711193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 39149626 - 39149686
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    ||||||||||||||||| | |||||||| ||||||||||||||||||||||||| ||||||    
T  39149626 ataatactccctccgattctatttataaaaaaaaattaattttttagattcattcagtaat 39149686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 318 - 425
Target Start/End: Complemental strand, 8453737 - 8453631
Alignment:
Q  318 ctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatga 417  Q
    ||||||||| |||||||||||||| || ||||||||||| ||||||||||||||||||| | || || ||||| |   |||||||| ||||||  |||||    
T  8453737 ctccgatcctatttataagaaaaatttgattttttagatacattgagtaattgatatatcttgtctagaatat-agataaatacattatttatgtaatga 8453639  T
Q  418 atcaaaaa 425  Q
    ||||||||    
T  8453638 atcaaaaa 8453631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 3236331 - 3236442
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||||||  ||||||  ||||||||| | |||||| ||||||||| |||||||| ||| | || |||||| |  |||||||||||||||||||    
T  3236331 tactccctccgatcttatttat--gaaaaaattgactttttaaattcattgaataattgatgtatctagtttaaaatttagaccaaatacatcatttata 3236428  T
Q  412 gaatgaatcaaaaa 425  Q
     ||||||| |||||    
T  3236429 caatgaattaaaaa 3236442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 449
Target Start/End: Complemental strand, 35149817 - 35149679
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||||||| || ||| |||||||||||||| || |||||||||||| |||| |||||| || ||| | || || |||||  ||||||||||||||||||     
T  35149817 tactcccttcggtcctatttataagaaaaagttgattttttagatttattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatg 35149718  T
Q  412 gaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
     ||| |||| ||||||| |||||||  ||||| ||||||    
T  35149717 caattaatcaaaaaagtcaaatgtttcttataaatagga 35149679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 308 - 424
Target Start/End: Original strand, 1223118 - 1223234
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatt 407  Q
    ||||||||||||||| ||  ||||||||||||||| | | ||||||||||||||| |||||| || ||| | ||  |||||||  ||||||||||| |||    
T  1223118 ataatactccctccggtcatatttataagaaaaaagtgactttttagattcattgtgtaattaatgtatcttgtcaaaaatatagaccaaatacataatt 1223217  T
Q  408 tatagaatgaatcaaaa 424  Q
    |||  ||||||| ||||    
T  1223218 tatgcaatgaattaaaa 1223234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 337 - 425
Target Start/End: Complemental strand, 42123090 - 42123002
Alignment:
Q  337 aaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||| | |||||||||||||||||||||| || ||| | || || |||||  ||||||||||||||||||  |||||||||||||    
T  42123090 aaaaaattgactttttagattcattgagtaattaatgtatcttgtctagaatatataccaaatacatcatttatgcaatgaatcaaaaa 42123002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 307 - 449
Target Start/End: Complemental strand, 36366178 - 36366036
Alignment:
Q  307 tataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcat 406  Q
    |||| |||| |||||| ||| |||||||||||||| ||||||||||||||||||| | |||||||| ||  | |  || || ||  |||||||||||||     
T  36366178 tatactactacctccggtcctatttataagaaaaagttaattttttagattcattcaataattgatgtacctagcctagaa-atagaccaaatacatcaa 36366080  T
Q  407 ttatagaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
     ||| ||||||||| |||||||||| ||||  ||||||||||||    
T  36366079 ctattgaatgaatcaaaaaagtaaattgtttcttatatatagga 36366036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 307 - 361
Target Start/End: Original strand, 35011206 - 35011260
Alignment:
Q  307 tataatactccctccgatccaatttataagaaaaaattaattttttagattcatt 361  Q
    ||||||||| |||||| ||| |||||||||||||| |||||||||||||||||||    
T  35011206 tataatactacctccggtcctatttataagaaaaagttaattttttagattcatt 35011260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 346 - 419
Target Start/End: Complemental strand, 13964530 - 13964457
Alignment:
Q  346 attttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaat 419  Q
    |||||||||||||||||||||| |||| || ||||| || |||||  |||| ||||||||||||| ||||||||    
T  13964530 attttttagattcattgagtaaatgatgtacatggtctataatatagaccacatacatcatttattgaatgaat 13964457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 425
Target Start/End: Complemental strand, 24619106 - 24618994
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||  ||||||||||| || || | |||| ||||||||||||||||| || ||  || |||| |||||  ||||||||||||||||||     
T  24619106 tactccctccggtcatatttataagaacaagttgactttt-agattcattgagtaattaatgtacttgttatagaatatagaccaaatacatcatttatg 24619008  T
Q  412 gaatgaatcaaaaa 425  Q
     |||||||||||||    
T  24619007 caatgaatcaaaaa 24618994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 32597631 - 32597534
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| |||| |||| | ||||||||||||||| || ||  |||||||||||||  || ||||||||| ||||   |||||||||||||    
T  32597631 atttataagaaaaagttaacttttaaaattcattgagtaattaatgtacgtggtataaaatatagacaaaatacatcgtttacgcaatgaatcaaaaa 32597534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 883751 - 883669
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||||| || | |||||||||| |||| |||||| |||||| | || |||||||| || |||||| |||||||||    
T  883751 atttataagaaaaagttgactttttagattgattgtgtaattaatatattttgtctaaaatataaatcaaatatatcatttat 883669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 369
Target Start/End: Complemental strand, 6354785 - 6354739
Alignment:
Q  323 atccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    |||| |||||||||||| ||||||||||||||||||||||| |||||    
T  6354785 atcctatttataagaaataattaattttttagattcattgaataatt 6354739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 376
Target Start/End: Original strand, 43332557 - 43332623
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatat 376  Q
    |||||||| |||| ||| |||||||||||||  || | |||||||||||||||||||||| ||||||    
T  43332557 aatactccatccggtcctatttataagaaaattttgactttttagattcattgagtaattaatatat 43332623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 319 - 372
Target Start/End: Original strand, 12958782 - 12958835
Alignment:
Q  319 tccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||| |||||||||||||| |||| |||||||||||||| | ||||||||    
T  12958782 tccgatcctatttataagaaaaagttaactttttagattcattcaataattgat 12958835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 350 - 410
Target Start/End: Complemental strand, 36191856 - 36191798
Alignment:
Q  350 tttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||||| |||||||| ||| | |||||||||||  ||||||||||||||||||    
T  36191856 tttagattcattgaataattgatgtatcttgtataaaatat--accaaatacatcatttat 36191798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 40483416 - 40483319
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||| ||||||| || | |||||  ||| |||||||||||||||||| |  | || |||||| ||||||||||||||||||  ||||||| |||||    
T  40483416 atttattagaaaaatttgactttttcaatttattgagtaattgatatatcttatctagaatatggaccaaatacatcatttatgcaatgaattaaaaa 40483319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 308 - 372
Target Start/End: Original strand, 6899415 - 6899479
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||| |||||| ||| |||||||||||||| |||| |||| ||||||||| | ||||||||    
T  6899415 ataatactacctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgat 6899479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 347 - 419
Target Start/End: Original strand, 27789313 - 27789385
Alignment:
Q  347 ttttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaat 419  Q
    |||||| |||||||||| |||||||| ||| ||||||| |||||  ||||||||||||| ||||  |||||||    
T  27789313 tttttttgattcattgaataattgatgtatctggtatataatattgaccaaatacatcagttattcaatgaat 27789385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 449
Target Start/End: Original strand, 8803226 - 8803365
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||| |||| ||  ||||| |||||||| |||| |||||| ||| |||  |||||| || ||| | || || |||||  ||||||||||||||||||    
T  8803226 atactccatccggtcatatttacaagaaaaagttaactttttatatttattatgtaattaatgtatcttgtctagaatatagaccaaatacatcatttat 8803325  T
Q  411 agaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
      |||||||| ||||||| |||| || |||||| ||||||    
T  8803326 gtaatgaatcaaaaaagttaaatattttttataaatagga 8803365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 293
Target Start/End: Complemental strand, 37141405 - 37141350
Alignment:
Q  238 gaaccttgcatatactatgtatcgtccctaccaactgaactaagtttacgagggca 293  Q
    |||||||||||||| |||| || |||| ||||||||||| |||||||| |||||||    
T  37141405 gaaccttgcatatattatgcattgtccataccaactgaattaagtttatgagggca 37141350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 44796348 - 44796478
Alignment:
Q  319 tccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaa 418  Q
    |||| ||| |||||||||||||| |||| |||||||||||||| | |||||||| || || |  || || ||  |||||||||||||  |||  ||||||    
T  44796348 tccggtcctatttataagaaaaagttaactttttagattcattcaataattgatgtacatagcctagaa-atagaccaaatacatcaactattcaatgaa 44796446  T
Q  419 tc-aaaaagtaaaatgttgtttatatatagga 449  Q
    || |||||||||| ||||  ||||||||||||    
T  44796447 tcaaaaaagtaaattgtttcttatatatagga 44796478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 10225371 - 10225321
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    ||||||||||| ||||| || ||||| ||||||||| ||||||||||||||    
T  10225371 accttgcatattctatgcattgtcccaaccaactgagctaagtttacgagg 10225321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 361
Target Start/End: Original strand, 24177970 - 24178020
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcatt 361  Q
    ||||| |||||| ||| |||||||||||||| |||| ||||||||||||||    
T  24177970 atactacctccggtcctatttataagaaaaagttaactttttagattcatt 24178020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 24822876 - 24822822
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattg 362  Q
    |||||| |||||||| ||| ||||||||||||||||| | |||||||||| ||||    
T  24822876 ataatattccctccggtcctatttataagaaaaaattgactttttagatttattg 24822822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 310 - 368
Target Start/End: Original strand, 40465235 - 40465293
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    ||||||||||||||||| ||||| |||| |||||| | ||||||||| |||||| ||||    
T  40465235 aatactccctccgatcctatttacaagagaaaattgactttttagatacattgaataat 40465293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 357
Target Start/End: Original strand, 22429534 - 22429579
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagatt 357  Q
    |||| |||||| ||| |||||||||||||| |||||||||||||||    
T  22429534 tactacctccggtcctatttataagaaaaagttaattttttagatt 22429579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 372
Target Start/End: Complemental strand, 24915311 - 24915258
Alignment:
Q  319 tccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| ||| ||||||| ||||||||||| |||||||||||||| | ||||||||    
T  24915311 tccggtcctatttatatgaaaaaattaactttttagattcattaaataattgat 24915258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 12958927 - 12958855
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggt 381  Q
    |||||||||||||| ||| || ||||||||| |||| | ||||| |||||||||| || ||||| ||| ||||    
T  12958927 taatactccctccggtcctatatataagaaacaatttacttttttgattcattgaatagttgatgtatttggt 12958855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 42786379 - 42786423
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||||||||| |||| |||||||||||||| | ||||||||    
T  42786379 atttataagaaaaagttaactttttagattcattcaataattgat 42786423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 43932201 - 43932141
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    |||||||||||||| |||   |||||||||| |||| | |||||||||||||||| |||||    
T  43932201 taatactccctccggtccttattataagaaacaattgactttttagattcattgaataatt 43932141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 67; Significance: 1e-29; HSPs: 61)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 328 - 449
Target Start/End: Complemental strand, 11030325 - 11030203
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaag 426  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| ||| || |||| |||||  ||||||||||||||||||  ||||||||| |||||    
T  11030325 atttataagaaaaaattaactttttagattcattgagtaattgatgtatctgatatagaatatagaccaaatacatcatttatgtaatgaatcaaaaaag 11030226  T
Q  427 taaaatgttgtttatatatagga 449  Q
    | |||||||  ||||||||||||    
T  11030225 tcaaatgtttcttatatatagga 11030203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 41153261 - 41153147
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||||||| |||||||||||||| || | ||||||||||||||||||||||||| ||| |||| || |||||  ||||||||||||||||||    
T  41153261 atactccctccgatcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtttataatatagaccaaatacatcatttat 41153162  T
Q  411 agaatgaatcaaaaa 425  Q
      |||||||||||||    
T  41153161 gcaatgaatcaaaaa 41153147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 337 - 449
Target Start/End: Complemental strand, 11182289 - 11182176
Alignment:
Q  337 aaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaagtaaaatgtt 435  Q
    |||||||||| |||||| ||| |||||||||||||| |||||| |||| |||||||| |||||||||||||||| |||||||||| |||||| |||||||    
T  11182289 aaaaaattaactttttaaatttattgagtaattgatgtatatgatatagaatatgaatcaaatacatcatttatggaatgaatcaaaaaagtcaaatgtt 11182190  T
Q  436 gtttatatatagga 449  Q
    | ||||||||||||    
T  11182189 gcttatatatagga 11182176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 449
Target Start/End: Original strand, 12962720 - 12962842
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatc-aaaaag 426  Q
    |||||||||||||| || | |||||||||||||||||||||| || ||  |||||||||||||  ||||||||||||||||||  |||||||| ||||||    
T  12962720 atttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtataaaatatagaccaaatacatcatttatgcaatgaatcaaaaaag 12962819  T
Q  427 taaaatgttgtttatatatagga 449  Q
    | |||||||  ||||| ||||||    
T  12962820 tcaaatgtttcttataaatagga 12962842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 318 - 435
Target Start/End: Original strand, 20555263 - 20555380
Alignment:
Q  318 ctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatga 417  Q
    ||||| ||| ||||||||||||||||||||||||||||| |||||| |||||||| ||| | || || |||||  ||||||||||| ||||||  |||||    
T  20555263 ctccggtcctatttataagaaaaaattaattttttagatacattgaataattgatgtatcttgtctagaatatagaccaaatacattatttatgtaatga 20555362  T
Q  418 atcaaaaagtaaaatgtt 435  Q
    || ||||||| |||||||    
T  20555363 ataaaaaagttaaatgtt 20555380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 308 - 425
Target Start/End: Complemental strand, 33274123 - 33274006
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatt 407  Q
    ||||||||||||||| |||||||||||| | ||  || | |||||||||||||| |||||||||| ||| | || |||||||| | ||||||| ||||||    
T  33274123 ataatactccctccggtccaatttataaaagaacttttactttttagattcattaagtaattgatgtatgttgtctaaaatataagccaaatatatcatt 33274024  T
Q  408 tatagaatgaatcaaaaa 425  Q
    |||| |||||||||||||    
T  33274023 tatacaatgaatcaaaaa 33274006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 12873721 - 12873853
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||||||||||||  ||||||||||||| || | |||||||||||||| ||||||| || ||| ||||||| |||||  || |||||||||||||||    
T  12873721 atactccctccgatcctttttataagaaaaagttgactttttagattcattaagtaattaatgtatttggtatagaatatagactaaatacatcatttat 12873820  T
Q  411 agaatgaatcaa-aaagtaaaatgttgtttata 442  Q
      |||||||||| ||||| |||| || ||||||    
T  12873821 gcaatgaatcaataaagtcaaatattttttata 12873853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 306 - 425
Target Start/End: Original strand, 5109356 - 5109475
Alignment:
Q  306 atataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatca 405  Q
    ||||||||||| ||||| ||| |||||||||||||| |||| |||||||||||||||||||||| || ||| ||||||| |||||   | |||||||| |    
T  5109356 atataatactctctccggtcctatttataagaaaaagttaactttttagattcattgagtaattaatgtatttggtatagaatataggctaaatacataa 5109455  T
Q  406 tttatagaatgaatcaaaaa 425  Q
    ||||||   |||||||||||    
T  5109456 tttatactttgaatcaaaaa 5109475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 306 - 449
Target Start/End: Original strand, 11794443 - 11794586
Alignment:
Q  306 atataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatca 405  Q
    |||||||||||||||||| || ||||||||||||||||| |||||||||||| ||||| ||||| || ||  ||||||| ||| |  | |||||||||||    
T  11794443 atataatactccctccga-cctatttataagaaaaaattgattttttagatttattgaataattaatgtacttggtatagaatgtagatcaaatacatca 11794541  T
Q  406 tttatagaatgaatcaaaaa-gtaaaatgttgtttatatatagga 449  Q
    |||||   ||||| |||||| ||||||||||  ||||| ||||||    
T  11794542 tttatgccatgaaacaaaaatgtaaaatgtttcttataaatagga 11794586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 38554601 - 38554469
Alignment:
Q  318 ctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatga 417  Q
    ||||| ||| |||||||||||||| |||| |||||| ||||||||||||||| || ||  ||||||| |||||  ||||||||||| ||||||  |||||    
T  38554601 ctccggtcctatttataagaaaaagttaactttttaaattcattgagtaattaatgtacttggtatagaatatagaccaaatacattatttatgtaatga 38554502  T
Q  418 atcaaaa-agtaaaatgttgtttatatatagga 449  Q
    ||||||| ||| |||||||  ||||| ||||||    
T  38554501 atcaaaatagtcaaatgtttcttataaatagga 38554469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 9152529 - 9152415
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||| ||  ||||| |||||| |||| | ||||||||||||||||||||||||| ||| | || ||||||||  ||||||||||||| ||||    
T  9152529 atactccctccggtcttatttacaagaaacaattgactttttagattcattgagtaattgatgtatctagtctaaaatatagaccaaatacatcaattat 9152430  T
Q  411 agaatgaatcaaaaa 425  Q
      ||||| |||||||    
T  9152429 ttaatgactcaaaaa 9152415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 425
Target Start/End: Complemental strand, 7943595 - 7943475
Alignment:
Q  306 atataatactccctccgatccaatttataagaaaaaa-ttaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatc 404  Q
    ||||| ||||||||||| ||| ||||||||||||||| || | |||||||||||||||| |||||||| ||| | || || |||||  |||||||| |||    
T  7943595 atatagtactccctccggtcctatttataagaaaaaaattgactttttagattcattgaataattgatgtatcttgtctacaatatagaccaaatatatc 7943496  T
Q  405 atttatagaatgaatcaaaaa 425  Q
    ||||||  ||||||| |||||    
T  7943495 atttatgcaatgaataaaaaa 7943475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 22333675 - 22333561
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||| | ||| | |||| |||||||||| | |||||||||||||||||||||| |||||  || |||| |||||  | ||||||||| ||||||    
T  22333675 atactccctctggtcctagttattagaaaaaattgactttttagattcattgagtaattaatatacttgatatataatatagatcaaatacattatttat 22333576  T
Q  411 agaatgaatcaaaaa 425  Q
      |||||||||||||    
T  22333575 gcaatgaatcaaaaa 22333561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 410
Target Start/End: Complemental strand, 34447652 - 34447554
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||||| | ||| |||||||||||||| || ||||||||||||||||| |||||  || ||| | || |||||||| |||||||||||| ||||||    
T  34447652 tactccctctggtcctatttataagaaaaagttgattttttagattcattgtgtaatcaatgtatcttgtctaaaatataaaccaaatacattatttat 34447554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 328 - 449
Target Start/End: Complemental strand, 38983132 - 38983010
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaag 426  Q
    |||||||| ||||| || ||||||||||||||||| ||||||||| ||| | || || |||||  || |||||||||||||||  ||||||||| |||||    
T  38983132 atttataaaaaaaagttgattttttagattcattgtgtaattgatgtatcttgtctagaatatagacaaaatacatcatttatgcaatgaatcaaaaaag 38983033  T
Q  427 taaaatgttgtttatatatagga 449  Q
    | |||| || |||||| ||||||    
T  38983032 tcaaatattttttataaatagga 38983010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 29988907 - 29989004
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||| |||||||| |||||||| |||||||| |||||| |||||| | || || |||||  | ||||||||||||||||  |||||||||||||    
T  29988907 atttataaaaaaaaattgattttttatattcattgtgtaattaatatattttgtctagaatatagatcaaatacatcatttatgcaatgaatcaaaaa 29989004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 32457346 - 32457249
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| || | |||||||||||||| |||||||||| ||| | || || |||||  || |||||||||||||||  |||||||||||||    
T  32457346 atttataagaaaaatttgactttttagattcattaagtaattgatgtatcttgtctagaatatagactaaatacatcatttatgcaatgaatcaaaaa 32457249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 421
Target Start/End: Original strand, 33824365 - 33824458
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca 421  Q
    |||||||||||||| || | |||||| |||||||||||||||||||||| | || ||||||||  |  ||||| |||||||||| |||||||||    
T  33824365 atttataagaaaaatttgactttttaaattcattgagtaattgatatatcttgtctaaaatatatattaaatatatcatttatacaatgaatca 33824458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 348 - 424
Target Start/End: Original strand, 10204961 - 10205037
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaa 424  Q
    ||||||||||||||||| ||||||| ||| | || ||||||||  || |||||||||||||||| ||||||||||||    
T  10204961 tttttagattcattgagcaattgatgtatcttgtctaaaatatagactaaatacatcatttatacaatgaatcaaaa 10205037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 308 - 426
Target Start/End: Complemental strand, 4410931 - 4410812
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaa-ttaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcat 406  Q
    |||||||||| |||  ||| ||||||||||||||| || | ||||||||||||||| |||||| || ||| | || ||||||||  | ||||||||||||    
T  4410931 ataatactccatcccgtcctatttataagaaaaaagttgactttttagattcattgtgtaattaatgtatcttgtttaaaatatagatcaaatacatcat 4410832  T
Q  407 ttatagaatgaatcaaaaag 426  Q
    ||||  ||| ||||||||||    
T  4410831 ttatgcaataaatcaaaaag 4410812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 42698213 - 42698153
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||||||||||||  |||||||| ||||| || | |||||||||||||||||||||||||    
T  42698213 tactccctccgatcatatttataaaaaaaatttgactttttagattcattgagtaattgat 42698153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45571029 - 45571089
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45571029 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45571089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45574696 - 45574756
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45574696 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45574756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45578363 - 45578423
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45578363 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45578423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45582030 - 45582090
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45582030 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45582090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45585697 - 45585757
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45585697 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45585757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45589364 - 45589424
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45589364 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45589424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45593031 - 45593091
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45593031 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45593091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45596698 - 45596758
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45596698 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45596758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45600365 - 45600425
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45600365 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45600425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45604032 - 45604092
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45604032 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45604092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45607699 - 45607759
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45607699 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45607759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45611366 - 45611426
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45611366 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45611426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 45615033 - 45615093
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  45615033 tactacctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 45615093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 425
Target Start/End: Complemental strand, 3837524 - 3837446
Alignment:
Q  347 ttttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||| ||| ||||||||||||||| ||| | || ||||||||  ||||||||||| ||||||  |||||||||||||    
T  3837524 ttttttcgatgcattgagtaattgatctatcttgtttaaaatatagaccaaatacattatttatgcaatgaatcaaaaa 3837446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 5281319 - 5281214
Alignment:
Q  319 tccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaa 418  Q
    |||||||  |||||||||||||| || | |||||| ||| |||  |||||| || ||| |||||||||||||  | ||||||||||||||||  ||||||    
T  5281319 tccgatcatatttataagaaaaagttgactttttatatt-attttgtaattaatgtatttggtataaaatatagatcaaatacatcatttatgcaatgaa 5281221  T
Q  419 tcaaaaa 425  Q
    |||||||    
T  5281220 tcaaaaa 5281214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 372
Target Start/End: Original strand, 45034395 - 45034457
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||| |||||| ||| |||||||||||||| |||| |||||||||||||| | ||||||||    
T  45034395 aatactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgat 45034457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 28249066 - 28248969
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| || | |||||||||||||| | ||||| || ||| ||||||| |||||  || |||||||| ||||||  ||| |||||||||    
T  28249066 atttataagaaaaagttgactttttagattcattaaataattaatgtatttggtatagaatatagactaaatacattatttatgcaattaatcaaaaa 28248969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 29169968 - 29169872
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| || | |||||| ||| |||||||||||||||||| | || || |||||  | ||||||||||||||| | ||||||| |||||    
T  29169968 atttataagaaaaatttgactttttaaatttattgagtaattgatatat-ttgtttagaatatagatcaaatacatcatttagacaatgaattaaaaa 29169872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 30758852 - 30758756
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| || | |||||||||| |||||||||||||| ||| | || |||| |||  |||||||||| |||||||  ||||||| |||||    
T  30758852 atttataagaaaaatttgactttttagatt-attgagtaattgatgtatcttgtctaaagtatagaccaaatacaccatttatgcaatgaataaaaaa 30758756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 39118049 - 39118126
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||| ||||||||||||||||||| |  | || |||||  ||||||||||| ||||||| ||| |||||||||    
T  39118049 tttttagatccattgagtaattgatatatcttatctagaatatagaccaaatacataatttatacaataaatcaaaaa 39118126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 425
Target Start/End: Complemental strand, 43714122 - 43714010
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||| ||||||||||||   || | |||||||||| | |||||||||||| ||| | || |||| |||  ||||||||||| ||||||     
T  43714122 tactccctccggtcctatttataagaaatttttgactttttagatttactgagtaattgatgtatcttgtctaaa-tatagaccaaatacataatttatt 43714024  T
Q  412 gaatgaatcaaaaa 425  Q
     |||||||||||||    
T  43714023 caatgaatcaaaaa 43714010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 4063287 - 4063331
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||||||||| ||||||||||||||||||| | ||||||||    
T  4063287 atttataagaaaaagttaattttttagattcattcaataattgat 4063331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 372
Target Start/End: Original strand, 5559378 - 5559422
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||||||||| || | |||||||||||||||||||||||||    
T  5559378 atttataagaaaaatttgactttttagattcattgagtaattgat 5559422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 42263461 - 42263525
Alignment:
Q  304 taatataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    |||||| |||||||||||| ||| |||||||||| ||| || ||||||||||| |||||| ||||    
T  42263461 taatatcatactccctccggtcctatttataagagaaagttgattttttagatacattgaataat 42263525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 331 - 390
Target Start/End: Original strand, 7833300 - 7833359
Alignment:
Q  331 tataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatat 390  Q
    ||||||||| ||| ||||||||||||||||||| |||||||| ||| || | ||||||||    
T  7833300 tataagaaacaatcaattttttagattcattgaataattgatgtatctgatttaaaatat 7833359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 449
Target Start/End: Original strand, 2936289 - 2936430
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaat--tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    |||||||||| | ||| |||||||| |||||| || |  |||| ||||||||||||||||| || ||  ||||||| |||||  || ||||| ||||| |    
T  2936289 atactccctctggtcctatttataaaaaaaaaatattggttttgagattcattgagtaattaatgtacttggtatagaatatagactaaatatatcatct 2936388  T
Q  409 atagaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
    ||  |||||||| ||||||| |||||||  ||||| ||||||    
T  2936389 atccaatgaatcaaaaaagtcaaatgtttcttataaatagga 2936430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 10735846 - 10735896
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||| |||| |||||||||||||||||| ||||| | ||||||    
T  10735846 accttgcatatattatgcatcgtccctaccaactgagctaagctcacgagg 10735896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 381
Target Start/End: Complemental strand, 12486142 - 12486072
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggt 381  Q
    |||||||||| | ||| ||||| |||||| |||| | |||||||||||||||| |||||||| ||| ||||    
T  12486142 atactccctctggtcctatttacaagaaacaattgactttttagattcattgaataattgatgtatttggt 12486072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 24592861 - 24592911
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||| |||| || ||||||||||||||| ||||||| ||||||    
T  24592861 accttgcatatattatgcattgtccctaccaactgagctaagttcacgagg 24592911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 26999156 - 26999106
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||| |||| || ||| ||||||||||||||||||| ||||||    
T  26999156 accttgcatatattatgcattgtctctaccaactgaactaagttcacgagg 26999106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 327 - 372
Target Start/End: Original strand, 15384441 - 15384486
Alignment:
Q  327 aatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||||||||||||||| |||||||||| ||| | ||||||||    
T  15384441 aatttataagaaaaaattaactttttagatttatttaataattgat 15384486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 35728578 - 35728501
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||| ||||||||| |||||||| ||| | || || |||||  |||||||| |||||||||  |||||||||||||    
T  35728578 tttttaaattcattgaataattgatgtatcttgtttagaatatagaccaaatatatcatttatgcaatgaatcaaaaa 35728501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 36881532 - 36881589
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    ||||||||||| | | |||||||||||||| || | ||||||||| ||||||||||||    
T  36881532 tactccctccggttctatttataagaaaaatttgactttttagatacattgagtaatt 36881589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 322 - 371
Target Start/End: Original strand, 43135041 - 43135089
Alignment:
Q  322 gatccaatttataagaaaaaattaattttttagattcattgagtaattga 371  Q
    ||||| ||||||||||||| |||||||||||||||||||| | |||||||    
T  43135041 gatcctatttataagaaaa-attaattttttagattcattaaataattga 43135089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 338 - 418
Target Start/End: Original strand, 2544372 - 2544452
Alignment:
Q  338 aaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaa 418  Q
    |||||||||||||||||||||||| | ||| |||  ||| ||||  | |||||  |||||||||||||||||  |||||||    
T  2544372 aaaaattaattttttagattcattcattaaatgacttatttggtcaataatatagaccaaatacatcatttaatgaatgaa 2544452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 239 - 283
Target Start/End: Complemental strand, 8920535 - 8920491
Alignment:
Q  239 aaccttgcatatactatgtatcgtccctaccaactgaactaagtt 283  Q
    ||||||||||||| ||||||  ||||||||||||||| |||||||    
T  8920535 aaccttgcatatattatgtactgtccctaccaactgacctaagtt 8920491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 376
Target Start/End: Complemental strand, 9121323 - 9121275
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatat 376  Q
    |||||||| ||| ||||||||||||||||||||  | ||||||||||||    
T  9121323 atttataataaacaattaattttttagattcataaaataattgatatat 9121275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 22523025 - 22523077
Alignment:
Q  238 gaaccttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||||| ||||||| |||| |||||||||| ||||| | ||||||    
T  22523025 gaaccttgcatatattatgtattgtccataccaactgagctaagctcacgagg 22523077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 39444994 - 39445054
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||||||||  ||| || ||||||||||| || | |||| ||||||||||||||||||||    
T  39444994 tactccctcctgtcctatatataagaaaaatttgacttttaagattcattgagtaattgat 39445054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 43713972 - 43714024
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattga 363  Q
    |||||||||||| ||  |||||||||||| |||| ||||||| ||||||||||    
T  43713972 atactccctccgctcttatttataagaaacaattgatttttttgattcattga 43714024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 3e-27; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 312 - 449
Target Start/End: Original strand, 38394427 - 38394565
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||||||| ||||||||||||||||| | |||||||||||||||| ||||| || ||  ||||||| ||| |  ||||||||||||||||||     
T  38394427 tactccctccgatcctatttataagaaaaaattgactttttagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttatg 38394526  T
Q  412 gaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
     |||||||| |||||||||||||||  ||||| ||||||    
T  38394527 caatgaatcaaaaaagtaaaatgtttcttataaatagga 38394565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 310 - 430
Target Start/End: Complemental strand, 14913257 - 14913137
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    |||||||| |||||||| |||||||||||||| || |||||||| ||||||||||||||| |||||| || ||||||||||  ||||||||||| ||| |    
T  14913257 aatactccttccgatcctatttataagaaaaatttgattttttaaattcattgagtaattaatatatttgatataaaatatagaccaaatacattattca 14913158  T
Q  410 tagaatgaatcaaaaagtaaa 430  Q
       ||||||||||||| ||||    
T  14913157 ggcaatgaatcaaaaaataaa 14913137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 311 - 419
Target Start/End: Original strand, 29299355 - 29299463
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||| ||| |||||||||||||| || |||||||||||||||||||| |||||| ||| | || ||||||||  ||| ||||||||||||||    
T  29299355 atactccctccggtcctatttataagaaaaatttgattttttagattcattgagtgattgatgtattttgtctaaaatatagaccgaatacatcatttat 29299454  T
Q  411 agaatgaat 419  Q
    | |||||||    
T  29299455 acaatgaat 29299463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 11931968 - 11932082
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaa-ttaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||||||| ||| ||||||||||||||| || | ||||||||||||||| |||||| || ||| | || ||||||||  ||||||||||||||||||    
T  11931968 tactccctccggtcctatttataagaaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctaaaatatagaccaaatacatcatttat 11932067  T
Q  411 agaatgaatcaaaaa 425  Q
    | ||| |||||||||    
T  11932068 ataataaatcaaaaa 11932082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 36434811 - 36434714
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| |||| |||||||||||||| |||||||||| ||| | || |||||||| ||||||||| |||||||||  ||||||| |||||    
T  36434811 atttataagaaaaatttaactttttagattcattaagtaattgatgtatcttgtctaaaatataaaccaaatatatcatttatgtaatgaataaaaaa 36434714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 349 - 425
Target Start/End: Complemental strand, 919754 - 919678
Alignment:
Q  349 ttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||||||||||||| ||| | ||||| |||||  |||||||||||||||||| ||||||||||||||    
T  919754 ttttagattcattgagtaattgatgtatctagtatagaatatagaccaaatacatcatttattgaatgaatcaaaaa 919678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 328 - 411
Target Start/End: Complemental strand, 8235510 - 8235427
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||||||||| |||||||||||| ||||| ||||| |||||| |||| || ||||| || |||||||||||||||||    
T  8235510 atttataagaaaaaattgattttttagatttattgaataattaatatatttggtctataatataaatcaaatacatcatttata 8235427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 449
Target Start/End: Complemental strand, 13789882 - 13789743
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||| | | |||||||||||||| || | |||| ||||||||||| ||||| || ||  ||||||| ||| |  ||||||||||||||||||    
T  13789882 atactccctccggttctatttataagaaaaagttgacttttcagattcattgaataattaatgtacttggtatagaatgtagaccaaatacatcatttat 13789783  T
Q  411 agaatgaatca-aaaagtaaaatgttgtttatatatagga 449  Q
      ||||||||| ||||||||||||||  ||||| ||||||    
T  13789782 gcaatgaatcaaaaaagtaaaatgtttcttataaatagga 13789743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 311 - 449
Target Start/End: Original strand, 33478103 - 33478244
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaa--ttaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    |||||||||| | |||  ||||||||||||||  || | ||||||||||||||||||||||||| ||| | || || |||||   |||||||||||||||    
T  33478103 atactccctctggtcctttttataagaaaaaaatttgaatttttagattcattgagtaattgatgtatctcgtctagaatataggccaaatacatcattt 33478202  T
Q  409 atagaatgaatcaaaaa-gtaaaatgttgtttatatatagga 449  Q
    ||  ||||||||||||| || |||||||  ||||| ||||||    
T  33478203 atgcaatgaatcaaaaatgtcaaatgtttcttataaatagga 33478244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 312 - 425
Target Start/End: Complemental strand, 21488432 - 21488319
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||||||| |||||||||||||| ||||||||||| | |||||  |||||| || ||| | || || |||||  ||||||||||| ||||||     
T  21488432 tactccctccgatcctatttataagaaaaagttaattttttaaactcattatgtaattaatgtattttgtctagaatatagaccaaatacattatttatg 21488333  T
Q  412 gaatgaatcaaaaa 425  Q
     ||||||| |||||    
T  21488332 caatgaattaaaaa 21488319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 22101923 - 22102020
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| || ||||||||||||||||| |||||| || ||| | || ||||||||  | ||||||||| ||||||| ||| |||||||||    
T  22101923 atttataagaaaaatttgattttttagattcattgtgtaattaatgtatcttgtctaaaatatagatcaaatacattatttatacaataaatcaaaaa 22102020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 449
Target Start/End: Original strand, 27488351 - 27488483
Alignment:
Q  317 cctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatg 416  Q
    |||||| ||| |||||||||||||||||||||||||||||||||| | |||||||| ||| | |  || || ||  |||||||| ||||  ||| |||||    
T  27488351 cctccggtcctatttataagaaaaaattaattttttagattcattcaataattgatgtatctagcctagaa-atagaccaaatatatcaactattgaatg 27488449  T
Q  417 aatc-aaaaagtaaaatgttgtttatatatagga 449  Q
    |||| |||||||||| ||||  ||||||||||||    
T  27488450 aatcaaaaaagtaaattgtttcttatatatagga 27488483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 318 - 449
Target Start/End: Complemental strand, 5002283 - 5002151
Alignment:
Q  318 ctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatga 417  Q
    ||||| ||| |||||||||||||  || | |||||||||| |||||||||||||| ||| | || ||||||||  | ||||||||||||||||  ||| |    
T  5002283 ctccgctcctatttataagaaaatttttactttttagatttattgagtaattgatgtatcttgtctaaaatatagatcaaatacatcatttatgcaatta 5002184  T
Q  418 atc-aaaaagtaaaatgttgtttatatatagga 449  Q
    ||| ||||||| |||||||  ||||| ||||||    
T  5002183 atcaaaaaagtcaaatgtttcttataaatagga 5002151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 315 - 449
Target Start/End: Original strand, 18473477 - 18473612
Alignment:
Q  315 tccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaa 414  Q
    |||||||  ||| |||||| ||| ||| || | ||||||||||||||||||||||||| ||| | || || |||||  | ||||| ||||||||||| ||    
T  18473477 tccctccattcctatttatgagagaaatttgactttttagattcattgagtaattgatgtatcttgtctagaatatagatcaaatgcatcatttatacaa 18473576  T
Q  415 tgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
    |||||| ||||||| |||||||  ||||| ||||||    
T  18473577 tgaatcaaaaaagtcaaatgtttcttataaatagga 18473612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 34297327 - 34297210
Alignment:
Q  311 atactccctccgatccaatttataagaaaaa---attaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatt 407  Q
    |||||||||||||||| |||||||| |||||   ||| | |||||||||||||| |||||||||| | | | || ||||||||  | ||| |||||||||    
T  34297327 atactccctccgatcctatttataaaaaaaataaattgactttttagattcattaagtaattgatgtgtcttgtctaaaatatagatcaattacatcatt 34297228  T
Q  408 tatagaatgaatcaaaaa 425  Q
    |||  ||||||| |||||    
T  34297227 tatgcaatgaattaaaaa 34297210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 312 - 449
Target Start/End: Original strand, 15968310 - 15968447
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||| |||||| ||| |||||||||||||| ||||||||||||||||||| | ||||| || ||| | |  || || ||  |||||||||||||  |||     
T  15968310 tactacctccggtcctatttataagaaaaagttaattttttagattcattcaataattaatgtatctagcctagaa-atagaccaaatacatcaactatt 15968408  T
Q  412 gaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
     |||||||| |||||||||| ||||  ||||||||||||    
T  15968409 caatgaatcaaaaaagtaaattgtttcttatatatagga 15968447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 361
Target Start/End: Complemental strand, 22731408 - 22731358
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcatt 361  Q
    ||||| |||||| ||| |||||||||||||| |||||||||||||||||||    
T  22731408 atactacctccggtcctatttataagaaaaagttaattttttagattcatt 22731358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 346 - 443
Target Start/End: Complemental strand, 24089153 - 24089055
Alignment:
Q  346 attttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatc-aaaaagtaaaatgttgtttatat 443  Q
    ||||||||| |||||| | ||| ||||  || |||| || |||||| |||| ||||||||||||| ||||||| | ||||||||||| |||||||||||    
T  24089153 attttttaggttcattcaataaatgatgaatgtggtctataatatggaccacatacatcatttattgaatgaacctaaaaagtaaaaagttgtttatat 24089055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 361
Target Start/End: Complemental strand, 1015308 - 1015255
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcatt 361  Q
    ||||||||||||||| | | |||||||||||||| |||| ||||||||||||||    
T  1015308 ataatactccctccggttctatttataagaaaaagttaactttttagattcatt 1015255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 1138366 - 1138317
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcatt 361  Q
    ||||||||||||||  ||||||||||||||||| |||||||| |||||||    
T  1138366 tactccctccgatcatatttataagaaaaaattgattttttaaattcatt 1138317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 361
Target Start/End: Complemental strand, 29031185 - 29031136
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcatt 361  Q
    ||||||||||| ||| |||||||||||||| |||| ||||||||||||||    
T  29031185 tactccctccggtcctatttataagaaaaagttaactttttagattcatt 29031136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 305 - 376
Target Start/End: Original strand, 14723375 - 14723449
Alignment:
Q  305 aatataatactccctccgatccaatttataagaaaaaa---ttaattttttagattcattgagtaattgatatat 376  Q
    ||||| |||||||||||| ||  |||||||| ||||||   |||| |||||| ||||||||||||||||||||||    
T  14723375 aatatcatactccctccggtcatatttataaaaaaaaaaaattaactttttaaattcattgagtaattgatatat 14723449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 363
Target Start/End: Original strand, 28499776 - 28499828
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattga 363  Q
    |||||||||||| ||  ||||||||| ||||| ||||||||||||||||||||    
T  28499776 atactccctccggtcacatttataagcaaaaaataattttttagattcattga 28499828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 324 - 372
Target Start/End: Complemental strand, 35349550 - 35349502
Alignment:
Q  324 tccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||||||| ||| |||| | |||||||||||||||||||||||||    
T  35349550 tccaatttataaaaaataattgactttttagattcattgagtaattgat 35349502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 3814121 - 3814022
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||| ||   |||||||||||||||| | ||||||||||| |||| ||||| || ||  ||||||| |||||  || |||||||| ||||||    
T  3814121 atactccctccggtcttgtttataagaaaaaattgactttttagattcgttgaataattaatgtacttggtatagaatatagactaaatacattatttat 3814022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 313 - 372
Target Start/End: Complemental strand, 11142511 - 11142452
Alignment:
Q  313 actccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||||||||||   |||||||||||| |||| ||||||| |||||||||| ||||||||    
T  11142511 actccctccgattatatttataagaaacaattcatttttttgattcattgaataattgat 11142452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 21636338 - 21636389
Alignment:
Q  239 aaccttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||||  ||| || |||||||| |||||||||||||||||||||    
T  21636338 aaccttgcatatatcatgcattgtccctacgaactgaactaagtttacgagg 21636389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 290
Target Start/End: Original strand, 21644585 - 21644636
Alignment:
Q  239 aaccttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||||  ||| || |||||||| |||||||||||||||||||||    
T  21644585 aaccttgcatatatcatgcattgtccctacgaactgaactaagtttacgagg 21644636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 35922055 - 35922145
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaat 419  Q
    ||||| || ||| ||||||||||||||||||||| | ||||| ||||||  |||||| |||||  ||||||||||||| ||||  |||||||    
T  35922055 atttacaataaacaattaattttttagattcattaaataatttatatat-cggtatagaatatagaccaaatacatcaattatttaatgaat 35922145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 426
Target Start/End: Complemental strand, 32902901 - 32902803
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaag 426  Q
    |||||||||||||||||   |||||| ||||||||| ||||| ||||||  | |||| |||||  || ||||| || ||||||| ||| ||||||||||    
T  32902901 atttataagaaaaaattgtctttttaaattcattgaataattaatatattcgatatataatatagactaaatatattatttatacaattaatcaaaaag 32902803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 368
Target Start/End: Original strand, 21610295 - 21610356
Alignment:
Q  307 tataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    ||||||||||| |||||||| ||||| |||| ||| |||| ||||||||| |||||| ||||    
T  21610295 tataatactccttccgatcctatttacaagataaagttaactttttagatacattgaataat 21610356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 36286172 - 36286095
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||| |||||||||||||| |||   || || |||||  ||||| ||||||||||||  |||||||||||||    
T  36286172 tttttagattaattgagtaattgatgtatcatgtctagaatatagaccaactacatcatttatgcaatgaatcaaaaa 36286095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 381
Target Start/End: Original strand, 7945833 - 7945905
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggt 381  Q
    |||||||||||||| ||| ||||| |||||| |||| | ||||||||| |||| | ||||| |||||| ||||    
T  7945833 taatactccctccggtcctatttacaagaaacaatttactttttagatacattaaataatttatatatttggt 7945905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 330 - 425
Target Start/End: Complemental strand, 19296089 - 19295993
Alignment:
Q  330 ttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaat-acatcatttatagaatgaatcaaaaa 425  Q
    |||||| ||||| || | |||||||||||||||||||| | || ||  ||||||| || ||  ||||||| |||||||||||  |||||||||||||    
T  19296089 ttataaaaaaaagttgactttttagattcattgagtaactaatgtacttggtatagaagatataccaaataacatcatttatccaatgaatcaaaaa 19295993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 372
Target Start/End: Original strand, 26327531 - 26327595
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaa-ttaattttttagattcattgagtaattgat 372  Q
    ||||||| |||||| ||  ||||||||||||||| |||| |||||||||||||| | ||||||||    
T  26327531 taatactacctccggtcttatttataagaaaaaaattaactttttagattcattcaataattgat 26327595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 38978891 - 38978831
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||||||||||   |||||||||| |||||||||||| | ||||||| |||| ||||    
T  38978891 tactccctccgatccttattataagaaacaattaatttttttggttcattgtgtaagtgat 38978831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 63; Significance: 3e-27; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 308 - 449
Target Start/End: Original strand, 48361047 - 48361189
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatt 407  Q
    ||||||||||||||| ||| |||||||||||||| || | ||||||||||||||||||||||||| ||| | || || |||||  |||||||||||||||    
T  48361047 ataatactccctccggtcctatttataagaaaaatttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatt 48361146  T
Q  408 tatagaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
    |||  |||||||| ||||||| |||||||  ||||| ||||||    
T  48361147 tatgcaatgaatcaaaaaagtcaaatgtttcttataaatagga 48361189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 53225794 - 53225669
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||| ||| ||||||||||||||||| | |||||||||||||||| ||||| || ||| ||||||| ||| |  ||||||||||||||||||    
T  53225794 atactccctccggtcctatttataagaaaaaattgactttttagattcattgaataattaatgtatttggtatagaatgtagaccaaatacatcatttat 53225695  T
Q  411 agaatgaatca-aaaagtaaaatgtt 435  Q
      ||||||||| ||||||||||||||    
T  53225694 gcaatgaatcaaaaaagtaaaatgtt 53225669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 315 - 425
Target Start/End: Complemental strand, 45828561 - 45828451
Alignment:
Q  315 tccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaa 414  Q
    ||||| || ||| ||||||||||||||||| |||||||||||||||||||||||| || ||| |||| || ||||| |||||||||||||||||||  ||    
T  45828561 tcccttcggtcctatttataagaaaaaattgattttttagattcattgagtaattaatgtatttggtctataatataaaccaaatacatcatttatgtaa 45828462  T
Q  415 tgaatcaaaaa 425  Q
     ||||||||||    
T  45828461 agaatcaaaaa 45828451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 30191911 - 30192008
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||||||||||| ||||||||||||||||||||||||||| ||| | || || |||||  ||||||||||||||||||  |||||||||||||    
T  30191911 atttataagaaaaaattgattttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaa 30192008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 43117987 - 43117890
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||||||||||| |||||||| ||||||||| |||||||| ||| |||||||||||||  ||||||||||||||||||  ||| |||||||||    
T  43117987 atttataagaaaaaattgattttttacattcattgaataattgatgtatttggtataaaatatagaccaaatacatcatttatgcaataaatcaaaaa 43117890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 8347644 - 8347757
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||||| |||| ||| |||||||||||||| || | |||||||||||||||||| |||||| ||| | |||||||||||  ||| |||||||||||||||    
T  8347644 tactccatccgctcctatttataagaaaaatttgactttttagattcattgagtgattgatgtattttgtataaaatatagaccgaatacatcatttata 8347743  T
Q  412 gaatgaatcaaaaa 425  Q
     ||||||| |||||    
T  8347744 caatgaataaaaaa 8347757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 447
Target Start/End: Complemental strand, 21554246 - 21554122
Alignment:
Q  323 atccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatc-a 421  Q
    |||| |||||||||||||| || |||||||||||||||||||||||| || ||| || |||| |||||  ||||||||||||||||||  |||||||| |    
T  21554246 atcctatttataagaaaaagttgattttttagattcattgagtaattaatgtat-tgatatagaatatagaccaaatacatcatttatgcaatgaatcga 21554148  T
Q  422 aaaagtaaaatgttgtttatatatag 447  Q
    |||||| |||| || |||||| ||||    
T  21554147 aaaagtcaaatattttttataaatag 21554122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 314 - 442
Target Start/End: Original strand, 47943728 - 47943857
Alignment:
Q  314 ctccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttataga 413  Q
    |||||| || ||| ||||||| ||||||||| | |||||||||| ||||||||||| || ||  |||||||||||||  || |||||||||||||||  |    
T  47943728 ctcccttcggtcctatttatatgaaaaaattgactttttagattaattgagtaattaatgtacttggtataaaatatagactaaatacatcatttatgca 47943827  T
Q  414 atgaatcaaaaa-gtaaaatgttgtttata 442  Q
    |||||||||||| || ||||||| ||||||    
T  47943828 atgaatcaaaaatgtcaaatgttatttata 47943857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 410
Target Start/End: Original strand, 14859703 - 14859802
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||||||||||||||||||||| ||||| || || |||||||||||||||| ||||||| ||| | || || |||||  || |||||||||||||||    
T  14859703 atactccctccgatccaatttataataaaaatttgatattttagattcattgagaaattgatgtatcttgtctacaatatatactaaatacatcatttat 14859802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 449
Target Start/End: Original strand, 48195888 - 48196027
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||| | ||| ||||||||||||||| ||| |||||| |||||||||||||||||  ||| | || || |||||  ||||||||||||||||||    
T  48195888 atactccctctggtcctatttataagaaaaaactaactttttaaattcattgagtaattgacgtatcttgtctagaatatagaccaaatacatcatttat 48195987  T
Q  411 agaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
      |||||| | ||||||| |||||||  ||||| ||||||    
T  48195988 gcaatgaaccaaaaaagtcaaatgtttcttataaatagga 48196027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 328 - 410
Target Start/End: Original strand, 16412249 - 16412331
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||||||||||||| | |||||||||||||||| |||||||||||| |||| || |||||  ||||||||||| ||||||    
T  16412249 atttataagaaaaaattgactttttagattcattgaataattgatatatttggtctagaatatagaccaaatacattatttat 16412331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 449
Target Start/End: Complemental strand, 44111894 - 44111756
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||  |||||||||||||| || | ||||||||||||||||||||||||| ||| |  | || |||||  ||||||||||||||||||     
T  44111894 tactccctccggtcttatttataagaaaaagttgactttttagattcattgagtaattgatgtatcttctttagaatatagaccaaatacatcatttatg 44111795  T
Q  412 gaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
     ||| |||| ||||||| |||||||  ||||| ||||||    
T  44111794 taattaatcaaaaaagtcaaatgtttcttataaatagga 44111756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 317 - 425
Target Start/End: Original strand, 41116566 - 41116673
Alignment:
Q  317 cctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatg 416  Q
    |||||| ||| |||||||||||||| |||| ||||||||||||||||||||||||| ||| |  | ||||||||  ||||||||||| ||||||| |||     
T  41116566 cctccggtcctatttataagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagaccaaatacat-atttatacaata 41116664  T
Q  417 aatcaaaaa 425  Q
    ||| |||||    
T  41116665 aataaaaaa 41116673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 311 - 449
Target Start/End: Complemental strand, 25477695 - 25477556
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||||||||| |  |||||||||||||  || | |||||| |||||||||||||||||| ||| | || || |||||  | ||||||||||||||||    
T  25477695 atactccctccgaccatatttataagaaaattttgactttttaaattcattgagtaattgatgtattttgtgtagaatatagatcaaatacatcatttat 25477596  T
Q  411 agaatgaatca-aaaagtaaaatgttgtttatatatagga 449  Q
      ||||||||| |||||| |||| || |||||| ||||||    
T  25477595 gcaatgaatcaaaaaagtcaaatattttttataaatagga 25477556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 425
Target Start/End: Complemental strand, 42169194 - 42169079
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    ||||| ||||| | ||| |||||||||||||| || | |||||||||| ||||| |||||||| ||| | || |  |||||| |||||||||||||||||    
T  42169194 aatacgccctctggtcctatttataagaaaaatttgactttttagatttattgaataattgatgtattttgtcttgaatatggaccaaatacatcattta 42169095  T
Q  410 tagaatgaatcaaaaa 425  Q
    |  |||||||||||||    
T  42169094 tgtaatgaatcaaaaa 42169079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 319 - 449
Target Start/End: Original strand, 42670770 - 42670901
Alignment:
Q  319 tccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaa 418  Q
    |||||||| |||||||||||||| |||| ||||| ||||||||| |||||| || ||| | || || |||||  |||||||| |||||||||  ||||||    
T  42670770 tccgatcctatttataagaaaaagttaacttttttgattcattgtgtaattaatgtatctcgtttagaatatagaccaaatatatcatttatgcaatgaa 42670869  T
Q  419 tc-aaaaagtaaaatgttgtttatatatagga 449  Q
    || ||||||| |||||||  ||||| ||||||    
T  42670870 tctaaaaagtcaaatgtttcttataaatagga 42670901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 311 - 442
Target Start/End: Original strand, 3162893 - 3163025
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||| ||||| ||  ||||||||||||||||| | |||||| |||||||| |||||| |||||| | || || |||||  ||  ||||||||||||||    
T  3162893 atactcactccggtcttatttataagaaaaaattgactttttaaattcattgtgtaattaatatatcttgtctagaatatagactcaatacatcatttat 3162992  T
Q  411 agaatgaatc-aaaaagtaaaatgttgtttata 442  Q
      |||||||| ||||||| ||||||| ||||||    
T  3162993 gcaatgaatcaaaaaagtcaaatgttttttata 3163025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 321 - 425
Target Start/End: Original strand, 33010682 - 33010786
Alignment:
Q  321 cgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatc 420  Q
    |||||| ||||||||||||||||| |||||||||||| |||| |||||| |||||| | || || |||||  |  |||||||||||||||| ||  ||||    
T  33010682 cgatcctatttataagaaaaaattgattttttagattaattgtgtaattaatatattttgtttagaatatatattaaatacatcatttataaaaaaaatc 33010781  T
Q  421 aaaaa 425  Q
    |||||    
T  33010782 aaaaa 33010786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 36132768 - 36132671
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||||||||||| | |||| |||| ||||||||| ||||| ||| | || |  |||||  || |||||||||||||||| |||||||||||||    
T  36132768 atttataagaaaaaattgacttttaagatacattgagtagttgatgtatcttgtcttgaatatagactaaatacatcatttatacaatgaatcaaaaa 36132671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 311 - 449
Target Start/End: Complemental strand, 55190816 - 55190678
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||| |||||| ||| ||||||||||||||||| |||||||| ||||||| | |||||||| ||| | |  || || ||  ||||||||||||| ||||    
T  55190816 atactacctccggtcctatttataagaaaaaattgattttttatattcattcaataattgatgtatctagcctagaa-atagaccaaatacatcaattat 55190718  T
Q  411 agaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
      | |||||| |||||||||| ||||  ||||||||||||    
T  55190717 ccactgaatcaaaaaagtaaattgtttcttatatatagga 55190678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 311 - 425
Target Start/End: Original strand, 4386134 - 4386248
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||| |||| |||  |||||||||||||| || | |||||| ||||||| |||||||||| ||| |  | || |||||  || |||||||||||||||    
T  4386134 atactctctccaatcttatttataagaaaaatttgactttttaaattcattaagtaattgatgtattttatctacaatatagactaaatacatcatttat 4386233  T
Q  411 agaatgaatcaaaaa 425  Q
      |||||||||||||    
T  4386234 gtaatgaatcaaaaa 4386248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 372
Target Start/End: Complemental strand, 20745482 - 20745420
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||| | |||| ||| |||||||||||||| ||||||||||||||||||| | ||||||||    
T  20745482 aatactacatccggtcctatttataagaaaaagttaattttttagattcattcaataattgat 20745420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 303 - 369
Target Start/End: Original strand, 24100749 - 24100815
Alignment:
Q  303 gtaatataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    |||| ||| |||||||||||||||   |||||||||| |||||| |||||||||||||||| |||||    
T  24100749 gtaaaatattactccctccgatccttattataagaaataattaactttttagattcattgaataatt 24100815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 372
Target Start/End: Original strand, 47866033 - 47866095
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||| |||||| ||| |||||||||||||| |||| |||||||||||||| | ||||||||    
T  47866033 aatactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgat 47866095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 3043807 - 3043903
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| ||||||||||||||||||| | |||||||| ||  | || ||||| ||  |||||||||||||  |||  |||||||||||||    
T  3043807 atttataagaaaaagttaattttttagattcattcaataattgatgtacctagtctaaaa-atagaccaaatacatcaactattcaatgaatcaaaaa 3043903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 372
Target Start/End: Complemental strand, 20459390 - 20459329
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||| |||||| ||| |||||||||||||| |||| |||||||||||||| | ||||||||    
T  20459390 atactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgat 20459329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 31977879 - 31977795
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgata--tatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||||||||||||    ||||||||||||||||||||||||||  |||| ||| || |||||  |||||||| |||||||||    
T  31977879 atttataagaaaaaatcggctttttagattcattgagtaattgatatgtatagggtttagaatatagaccaaatatatcatttat 31977795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 369
Target Start/End: Complemental strand, 36196518 - 36196457
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    ||||||||||||||| |||   ||||||||||||||| ||||||||||||||| || |||||    
T  36196518 ataatactccctccggtccttattataagaaaaaattgattttttagattcatagaataatt 36196457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 372
Target Start/End: Original strand, 42804254 - 42804315
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||| |||||| ||| |||||||||||||| |||| |||||||||||||| | ||||||||    
T  42804254 atactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgat 42804315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 8826839 - 8826775
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatat 376  Q
    |||| |||||| ||| |||| || ||||||||| | |||||||||||||||| ||||||||||||    
T  8826839 tacttcctccggtcctatttgtatgaaaaaatttactttttagattcattgaataattgatatat 8826775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 378 - 449
Target Start/End: Original strand, 19150788 - 19150860
Alignment:
Q  378 tggtataaaatatgaaccaaatacatcatttatagaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
    ||||||| |||||  ||||||||||||||||||  |||||||| |||||||||||||||  ||||| ||||||    
T  19150788 tggtatagaatatagaccaaatacatcatttatgcaatgaatcgaaaaagtaaaatgtttcttataaatagga 19150860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 240 - 288
Target Start/End: Original strand, 21623434 - 21623482
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaagtttacga 288  Q
    |||||||||||| |||| || ||||||||||||||||||||||| ||||    
T  21623434 accttgcatatattatgcattgtccctaccaactgaactaagttcacga 21623482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 348 - 431
Target Start/End: Complemental strand, 42183270 - 42183186
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaa-tcaaaaagtaaaa 431  Q
    |||||||||||||| | ||| |||||||| ||||| | |||||||||||  ||||| |||||| ||||||| | |||||||||||    
T  42183270 tttttagattcattcaataactgatatatgtggtaaataatatgaaccacgtacattatttattgaatgaacttaaaaagtaaaa 42183186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 316 - 372
Target Start/End: Original strand, 43020759 - 43020815
Alignment:
Q  316 ccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||||| ||| |||||||||||||| |||| |||||||||||||| | ||||||||    
T  43020759 ccctccggtcctatttataagaaaaagttaactttttagattcattcaataattgat 43020815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 52535950 - 52536006
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    ||||||||||||||  |||||||||||||| |||| ||||||||| |||||| ||||    
T  52535950 tactccctccgatcttatttataagaaaaagttaactttttagatacattgaataat 52536006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 346 - 425
Target Start/End: Complemental strand, 9044502 - 9044423
Alignment:
Q  346 attttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||| |||| |||||||||||||| ||| | || || |||||   ||||| |||||||||||| |||||||||||||    
T  9044502 attttttggatttattgagtaattgatgtattttgtctagaatataggccaaagacatcatttatacaatgaatcaaaaa 9044423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 425
Target Start/End: Complemental strand, 696496 - 696386
Alignment:
Q  315 tccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaa 414  Q
    |||||||| ||| |||||||||||||| ||||||||| ||||| |||   ||||| || ||| | || || |||||  || |||| ||||||||||  ||    
T  696496 tccctccggtcctatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaa 696397  T
Q  415 tgaatcaaaaa 425  Q
    |||||||||||    
T  696396 tgaatcaaaaa 696386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 425
Target Start/End: Complemental strand, 764794 - 764684
Alignment:
Q  315 tccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaa 414  Q
    |||||||| ||| |||||||||||||| ||||||||| ||||| |||   ||||| || ||| | || || |||||  || |||| ||||||||||  ||    
T  764794 tccctccggtcctatttataagaaaaagttaatttttaagatttattatataattaatgtatcttgtttagaatatagactaaatccatcatttatgcaa 764695  T
Q  415 tgaatcaaaaa 425  Q
    |||||||||||    
T  764694 tgaatcaaaaa 764684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 421
Target Start/End: Complemental strand, 2583231 - 2583122
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||||||||  |||| ||||||||| ||||  | | ||||||||||||||| ||||||  ||||| | || || |||||  |||||||| |||||||||     
T  2583231 tactccctctcatcctatttataaggaaaagattactttttagattcattgtgtaattattatattttgtctataatatagaccaaatatatcatttatg 2583132  T
Q  412 gaatgaatca 421  Q
     |||||||||    
T  2583131 caatgaatca 2583122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 289
Target Start/End: Original strand, 4485848 - 4485897
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaagtttacgag 289  Q
    |||||||||||||||||||| |||| || ||| ||||||||||| |||||    
T  4485848 accttgcatatactatgtattgtccttatcaattgaactaagttcacgag 4485897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 432
Target Start/End: Complemental strand, 17659574 - 17659489
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatc-aaaaagtaaaat 432  Q
    |||||||||||||| | | | |||||||| ||||  |||||||| |||| |||||||||| || ||||||| | ||||||||||||    
T  17659574 tttttagattcattcaattaatgatatatgtggttcaaaatatggaccacatacatcattaattgaatgaacctaaaaagtaaaat 17659489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 369
Target Start/End: Original strand, 19150657 - 19150714
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    |||||||| || ||| |||||||||||||| || | |||||||||| |||||||||||    
T  19150657 tactccctacggtcctatttataagaaaaagttgactttttagatttattgagtaatt 19150714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 368
Target Start/End: Complemental strand, 19485722 - 19485665
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    |||||||||||| ||| ||||| |||| |||||| ||||||||||| |||||| ||||    
T  19485722 atactccctccggtcctatttacaagagaaaattgattttttagatacattgaataat 19485665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 25700488 - 25700565
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| ||||| |||| ||| || | || |||||  |||| ||||||||||||| ||||||||| ||||    
T  25700488 tttttagattcattcagtaaatgatgtatgtgatctacaatatagaccacatacatcatttattgaatgaatctaaaa 25700565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 435
Target Start/End: Complemental strand, 29686550 - 29686425
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||| |||   |||||||||| ||||||||||||| ||||||||  ||||| || ||||| ||   ||||||  || | ||||||||||||     
T  29686550 atactccctccggtccttattataagaaacaattaattttttaaattcattgtataattaatgtatattgttataaatatagactagatacatcatttac 29686451  T
Q  411 agaatgaatc-aaaaagtaaaatgtt 435  Q
    | |||||| | ||||||| |||||||    
T  29686450 acaatgaacctaaaaagtcaaatgtt 29686425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 53658497 - 53658400
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| ||||||||||||||| ||||  ||| | || ||| | || || |||||  ||||||||||| ||| ||| ||||||| |||||    
T  53658497 atttataagaaaaagttaattttttagatttattgtataactaatgtattttgtctagaatatagaccaaatacattattcatacaatgaataaaaaa 53658400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Complemental strand, 1205233 - 1205181
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattg 362  Q
    ||||||||||||||||    ||||||||||||||| |||||||| ||||||||    
T  1205233 aatactccctccgatctttattataagaaaaaattgattttttatattcattg 1205181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 3251340 - 3251392
Alignment:
Q  238 gaaccttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||| ||| ||||||| || | ||||||||||| |||||||||||||    
T  3251340 gaaccttgcaaatattatgtattgttcttaccaactgaattaagtttacgagg 3251392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 4418246 - 4418186
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||||||||| |||   ||||||||||||||| ||||||||| ||||||| |||| ||||    
T  4418246 tactccctccggtccttattataagaaaaaattgattttttaggttcattgtgtaagtgat 4418186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 8495031 - 8494983
Alignment:
Q  242 cttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||| |||| || ||||||||||||||| ||||||| ||||||    
T  8495031 cttgcatatattatgcattgtccctaccaactgagctaagttcacgagg 8494983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 10082446 - 10082398
Alignment:
Q  242 cttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||| ||||| ||||||| ||||||||||||||| ||||||| ||||||    
T  10082446 cttgtatatattatgtattgtccctaccaactgagctaagttcacgagg 10082398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 404
Target Start/End: Original strand, 23226965 - 23227041
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatc 404  Q
    ||||||||||||||||| | ||||||||||||||  |||||| || ||| | || ||||| ||  ||||||||||||    
T  23226965 atttataagaaaaaattgactttttagattcattatgtaattaatgtatcttgtctaaaaaatagaccaaatacatc 23227041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 52136698 - 52136758
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||||||||| |||   ||||||||||||||||| ||||||| ||||||| |||| ||||    
T  52136698 tactccctccggtccttattataagaaaaaattaactttttaggttcattgtgtaagtgat 52136758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 62; Significance: 1e-26; HSPs: 39)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 43448957 - 43449070
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||||| || ||||| |||||||||||||| || ||||||||||||||||||||||||||||||| | || ||  |||| ||||||||||||||||||||    
T  43448957 tactccttctgatcctatttataagaaaaagttgattttttagattcattgagtaattgatatatcttgtctatgatataaaccaaatacatcatttata 43449056  T
Q  412 gaatgaatcaaaaa 425  Q
     |||||| ||||||    
T  43449057 caatgaaccaaaaa 43449070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 309 - 425
Target Start/End: Original strand, 21662882 - 21662998
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    |||||||||||||| ||| |||||||||||||| || | |||||||||||||||||||||| || ||  ||||||| | |||  ||||||||||||||||    
T  21662882 taatactccctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtacttggtatagattatagaccaaatacatcattt 21662981  T
Q  409 atagaatgaatcaaaaa 425  Q
    ||  |||||||||||||    
T  21662982 atgcaatgaatcaaaaa 21662998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 425
Target Start/End: Complemental strand, 12747848 - 12747733
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    ||||||| ||||| ||| ||||||||||||||||| ||||||||||||||| ||||||||||| ||| |||| || |||||  ||||||||||  |||||    
T  12747848 aatactctctccggtcctatttataagaaaaaattgattttttagattcatcgagtaattgatgtatttggtctagaatatacaccaaatacacaattta 12747749  T
Q  410 tagaatgaatcaaaaa 425  Q
    |  |||||||||||||    
T  12747748 tgcaatgaatcaaaaa 12747733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 311 - 425
Target Start/End: Original strand, 51723376 - 51723490
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||| | |||||| |||||||||||||| || |||||||||||||||||||||||| || ||| || |||| |||||  || ||||| |||||||||    
T  51723376 atactccattcgatcctatttataagaaaaagttgattttttagattcattgagtaattaatgtatttgatatagaatatagactaaatatatcatttat 51723475  T
Q  411 agaatgaatcaaaaa 425  Q
    | |||||||||||||    
T  51723476 acaatgaatcaaaaa 51723490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 311 - 425
Target Start/End: Original strand, 44518034 - 44518148
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||| || |||||| |||||||||||||  || | |||||||||||||||||||||| || ||| | || ||||||||  |||||||||||||||||     
T  44518034 atactctcttcgatcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctaaaatatagaccaaatacatcatttag 44518133  T
Q  411 agaatgaatcaaaaa 425  Q
    | |||||||||||||    
T  44518134 acaatgaatcaaaaa 44518148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 312 - 449
Target Start/End: Complemental strand, 53442056 - 53441918
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||| |||||||||||||| || | |||||| ||||||||| ||||| || ||  ||||||| ||| |  ||||||||||||||||||     
T  53442056 tactccctccggtcctatttataagaaaaagttgactttttaaattcattgaataattaatgtacttggtatagaatgtataccaaatacatcatttatg 53441957  T
Q  412 gaatgaatca-aaaagtaaaatgttgtttatatatagga 449  Q
     ||||||||| ||||||||||||||  ||||| ||||||    
T  53441956 caatgaatcaaaaaagtaaaatgtttcttataaatagga 53441918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 329 - 435
Target Start/End: Complemental strand, 12065041 - 12064934
Alignment:
Q  329 tttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaagt 427  Q
    |||||||||||||||| | |||||| ||||||| ||||||| |||||| | ||||| |||||  ||||||||||||||| ||  ||||||||| ||||||    
T  12065041 tttataagaaaaaattgactttttaaattcattaagtaattaatatatttagtatagaatatagaccaaatacatcattaatgcaatgaatcaaaaaagt 12064942  T
Q  428 aaaatgtt 435  Q
    ||||||||    
T  12064941 aaaatgtt 12064934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 45010900 - 45010786
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||| ||||| ||| |||||||||| ||||||||||||||||||| ||||| |||||||| ||| | || || |||||  |||| | |||||||||||    
T  45010900 atactctctccggtcctatttataagagaaaattaattttttagatttattgaataattgatgtatctagtttagaatatagaccacaaacatcatttat 45010801  T
Q  411 agaatgaatcaaaaa 425  Q
    | ||| |||||||||    
T  45010800 acaataaatcaaaaa 45010786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 23223090 - 23222994
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||||||||||| |||||| ||||||||||||||| |||| ||| | || ||||||||  ||||||||||||||||||| ||| ||| |||||    
T  23223090 atttataagaaaaaattgattttt-agattcattgagtaactgatgtatcttgtctaaaatatagaccaaatacatcatttatataataaattaaaaa 23222994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 318 - 425
Target Start/End: Original strand, 9236091 - 9236199
Alignment:
Q  318 ctccgatccaatttataagaaaaaa-ttaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatg 416  Q
    ||||||||| | ||||||||||||| |||| ||||| ||||||||||||||||||| ||| || |||| |||||  || ||||| |||||||||  ||||    
T  9236091 ctccgatcctacttataagaaaaaagttaacttttttgattcattgagtaattgatgtatctgatatagaatatagactaaatatatcatttatgtaatg 9236190  T
Q  417 aatcaaaaa 425  Q
    |||||||||    
T  9236191 aatcaaaaa 9236199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 313 - 425
Target Start/End: Complemental strand, 19649727 - 19649615
Alignment:
Q  313 actccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatag 412  Q
    |||||||| | ||| ||||| |||||| | || ||||||||||||||||||||||||||| |||  ||| ||||||||  || |||||||||| ||||      
T  19649727 actccctctggtcctatttacaagaaacatttgattttttagattcattgagtaattgatgtattcggtctaaaatatagactaaatacatcaattattc 19649628  T
Q  413 aatgaatcaaaaa 425  Q
    |||||||||||||    
T  19649627 aatgaatcaaaaa 19649615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 310 - 425
Target Start/End: Original strand, 54537440 - 54537555
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    |||||||||| |||||| |||||||||||||| || | |||| |||||||||||||||||||| ||| | || || |||||  | ||||||||  |||||    
T  54537440 aatactcccttcgatcctatttataagaaaaatttgacttttaagattcattgagtaattgatgtatctagtctagaatatagatcaaatacacaattta 54537539  T
Q  410 tagaatgaatcaaaaa 425  Q
    |  |||||||||||||    
T  54537540 tgcaatgaatcaaaaa 54537555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 52864966 - 52865063
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||| ||| |  | ||||||||  || ||||| |||||||||  |||||||||||||    
T  52864966 atttatgagaaaaatttaactttttagattcattgagtaattgatgtatcttatctaaaatatagactaaatatatcatttatgcaatgaatcaaaaa 52865063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 328 - 411
Target Start/End: Original strand, 40460360 - 40460444
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaatt-gatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||||||||||| ||||||||||||||| ||||||  || ||| | || ||||||||  |||||||||||||||||||    
T  40460360 atttataagaaaaaattaactttttagattcattgtgtaattaaatgtatcttgtttaaaatatagaccaaatacatcatttata 40460444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 49885378 - 49885438
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||||| | |||||||||||||||||||||||||||||||||| | ||||||||    
T  49885378 tactacctccgattctatttataagaaaaaattaattttttagattcattcaataattgat 49885438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 312 - 449
Target Start/End: Original strand, 51516957 - 51517094
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||| |||||||||||||| || | |||||||||| || |||||||| || ||  ||| ||| |||||  ||||||||||||||||||     
T  51516957 tactccctccggtcctatttataagaaaaagttgactttttagatt-atggagtaattaatgtacttggcatagaatatagaccaaatacatcatttatg 51517055  T
Q  412 gaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
     |||||| | ||||||| |||||||  ||||| ||||||    
T  51517056 caatgaaccaaaaaagtcaaatgtttcttataaatagga 51517094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 343 - 449
Target Start/End: Original strand, 8266263 - 8266368
Alignment:
Q  343 ttaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatc-aaaaagtaaaatgttgtttat 441  Q
    |||| ||||||||||||||||||||||||| ||| |  | ||||||||  |||||| |||| ||||||| |||||||| ||||||| |||||||  ||||    
T  8266263 ttaactttttagattcattgagtaattgatgtattttatctaaaatat--accaaacacattatttatacaatgaatcaaaaaagtcaaatgtttcttat 8266360  T
Q  442 atatagga 449  Q
    | ||||||    
T  8266361 aaatagga 8266368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 312 - 368
Target Start/End: Original strand, 42225561 - 42225617
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    ||||||||||| ||| ||||| ||||||||||||||||||||||| |||||| ||||    
T  42225561 tactccctccggtcccatttacaagaaaaaattaattttttagatacattgaataat 42225617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 317 - 372
Target Start/End: Complemental strand, 5177909 - 5177854
Alignment:
Q  317 cctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||| ||| ||||||||||||||||||| |||||||||||||| | ||||||||    
T  5177909 cctccggtcctatttataagaaaaaattaactttttagattcattcaataattgat 5177854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 307 - 366
Target Start/End: Original strand, 50561048 - 50561107
Alignment:
Q  307 tataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagta 366  Q
    |||| ||||| ||||||||  ||||||||| ||||| |||||||||||||||||||||||    
T  50561048 tatattactctctccgatcatatttataagcaaaaaataattttttagattcattgagta 50561107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 442
Target Start/End: Complemental strand, 20028602 - 20028489
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaagt 427  Q
    ||||||||||||||  ||| |||| ||||||||||| ||||| |||||  ||| ||| |||||  | ||||||||||||||||  ||||||| |||||||    
T  20028602 atttataagaaaaagctaactttt-agattcattgaataattaatatacttgggatagaatatagatcaaatacatcatttatgaaatgaataaaaaagt 20028504  T
Q  428 aaaatgttgtttata 442  Q
     |||| || ||||||    
T  20028503 caaatattttttata 20028489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 28043499 - 28043417
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||||||||  ||| ||| |||||||||||||| ||||| || |||||||| ||||||||  ||||||||| ||| ||||    
T  28043499 atttataagaaactattgattatttagattcattgaataattaatgtatatggtttaaaatatataccaaatacgtcaattat 28043417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 36985155 - 36985268
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||| |||||||||||||  ||||||||| ||||| ||||  ||||| || ||| | || || |||||  || |||||||| ||||||     
T  36985155 tactccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatg 36985254  T
Q  412 gaatgaatcaaaaa 425  Q
     |||||||||||||    
T  36985255 caatgaatcaaaaa 36985268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 425
Target Start/End: Original strand, 37010594 - 37010707
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||| |||||||||||||  ||||||||| ||||| ||||  ||||| || ||| | || || |||||  || |||||||| ||||||     
T  37010594 tactccctccggtcctatttataagaaaatgttaatttttaagatttattgtataattaatgtatcttgtttagaatatagactaaatacattatttatg 37010693  T
Q  412 gaatgaatcaaaaa 425  Q
     |||||||||||||    
T  37010694 caatgaatcaaaaa 37010707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 238 - 289
Target Start/End: Original strand, 1744003 - 1744054
Alignment:
Q  238 gaaccttgcatatactatgtatcgtccctaccaactgaactaagtttacgag 289  Q
    |||||||||||||| ||||||| |||| ||||||||||| |||||| |||||    
T  1744003 gaaccttgcatatattatgtattgtccataccaactgaattaagttcacgag 1744054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 310 - 369
Target Start/End: Complemental strand, 48593293 - 48593234
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    ||||||||||||| ||| || || |||||| || |||||||||||||||||||| |||||    
T  48593293 aatactccctccggtcctatatacaagaaacaagtaattttttagattcattgaataatt 48593234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 331 - 425
Target Start/End: Original strand, 27707192 - 27707286
Alignment:
Q  331 tataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||| ||||||| || ||||| ||||||| | ||| |||||||||| || || ||||   |||| ||||||||||||| ||||||||| ||||    
T  27707192 tataagcaaaaattcatattttaaattcattcaataaatgatatatattgtctacaataaagaccacatacatcatttattgaatgaatctaaaa 27707286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 35099197 - 35099091
Alignment:
Q  319 tccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaa 418  Q
    |||| ||| |||||||||||||| || |  ||||| ||| |||| |||||| |||||| | || || |||||  ||||||||||||||||||| ||| ||    
T  35099197 tccggtcctatttataagaaaaagttgaccttttaaatttattgtgtaattaatatatcttgtctagaatatagaccaaatacatcatttatacaataaa 35099098  T
Q  419 tcaaaaa 425  Q
    | |||||    
T  35099097 ttaaaaa 35099091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 35863828 - 35863878
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||| ||||||| |||| |||||||||| ||||| ||||||||    
T  35863828 accttgcatatattatgtattgtccttaccaactgagctaagcttacgagg 35863878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 339 - 425
Target Start/End: Complemental strand, 40326556 - 40326470
Alignment:
Q  339 aaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||| | ||||||| |||||| | | | |||| ||| |||| || ||||||||||| |||||||||| || ||||||||||||||    
T  40326556 aaaattgactttttaggttcattcaattaatgatgtatgtggtttataatatgaaccacatacatcattaattgaatgaatcaaaaa 40326470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 369
Target Start/End: Original strand, 50354266 - 50354323
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    ||||||| |||| ||| |||||||||||||||||||   ||||||||||||||||||||    
T  50354266 atactccatccggtcctatttataagaaaaaattaa-catttagattcattgagtaatt 50354323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 8987744 - 8987841
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||| ||| |||||||||||||||| |||||| ||| | || ||| |||| || ||| | |||||||||||| | |||| ||||| ||| ||||    
T  8987744 atttataataaataattaattttttagatgcattgaataacttatgtatttggtctagaatttaaaccaaatacataaattattgaatgtatctaaaa 8987841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 319 - 368
Target Start/End: Original strand, 23920630 - 23920679
Alignment:
Q  319 tccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    |||||||  ||||||||||||||||| |||| ||| ||||||||||||||    
T  23920630 tccgatcttatttataagaaaaaattgatttattaaattcattgagtaat 23920679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 27185523 - 27185482
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaag 281  Q
    |||||||||||| ||||||| ||||||||||||||| |||||    
T  27185523 accttgcatatattatgtattgtccctaccaactgagctaag 27185482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 237 - 281
Target Start/End: Original strand, 759606 - 759650
Alignment:
Q  237 tgaaccttgcatatactatgtatcgtccctaccaactgaactaag 281  Q
    ||||| ||||||||| |||| || |||||||||||||||||||||    
T  759606 tgaactttgcatatattatgcattgtccctaccaactgaactaag 759650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 10926517 - 10926465
Alignment:
Q  238 gaaccttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||||| |||| || |||| |||||||||| ||||| ||||||||    
T  10926517 gaaccttgcatatattatgcattgtccttaccaactgagctaagcttacgagg 10926465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 425
Target Start/End: Complemental strand, 25954146 - 25954058
Alignment:
Q  337 aaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||| | |||||||| ||||||||||||||| || ||| | || || |||||  | |||||| |||||||||| ||||||| |||||    
T  25954146 aaaaaaatgattttttaaattcattgagtaattaatgtatcttgtctagaatatagatcaaatatatcatttatataatgaattaaaaa 25954058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 28406463 - 28406523
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    |||||||||||||| ||| ||||| |||||| |||| | ||||||||||| |||| |||||    
T  28406463 taatactccctccggtcctatttacaagaaacaattgactttttagattcgttgaataatt 28406523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 33371860 - 33371920
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||||||  |||||||||||||| ||||||||||| ||| ||| | ||||||||    
T  33371860 tactacctccgatcatatttataagaaaaagttaattttttaaatttattcaataattgat 33371920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 62; Significance: 1e-26; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 309 - 449
Target Start/End: Complemental strand, 26760325 - 26760184
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    |||||||||||||| ||| ||||||||||||||||| |||||||| ||||||||||| ||| || ||  ||||||| |||||  ||||||||||||||||    
T  26760325 taatactccctccggtcctatttataagaaaaaattgattttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcattt 26760226  T
Q  409 atagaatgaatca-aaaagtaaaatgttgtttatatatagga 449  Q
    ||  ||||||||| |||||| |||||||  ||||| ||||||    
T  26760225 attcaatgaatcaaaaaagtcaaatgtttcttataaatagga 26760184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 310 - 425
Target Start/End: Complemental strand, 50155449 - 50155334
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    |||||| |||||| ||| |||||||||||||| || | ||||||||||||||||||||||||| ||| |||| || |||||  |||||||||||||||||    
T  50155449 aatacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattgatgtatttggtctataatatagaccaaatacatcattta 50155350  T
Q  410 tagaatgaatcaaaaa 425  Q
    |  ||||||| |||||    
T  50155349 tgcaatgaattaaaaa 50155334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 328 - 449
Target Start/End: Complemental strand, 38738064 - 38737942
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaag 426  Q
    |||||||||||||| |||| ||||||||||||||||||||||||| ||| | || || ||||| ||||||||||||| |||||  ||||||||| |||||    
T  38738064 atttataagaaaaatttaactttttagattcattgagtaattgatgtatcttgtctagaatataaaccaaatacatcctttatgcaatgaatcaaaaaag 38737965  T
Q  427 taaaatgttgtttatatatagga 449  Q
    | |||||||  ||||| ||||||    
T  38737964 tcaaatgtttcttataaatagga 38737942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 319 - 425
Target Start/End: Original strand, 49944839 - 49944945
Alignment:
Q  319 tccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaa 418  Q
    |||| ||| |||||||||||||| |||| |||||||||||||||| |||||||| ||| | || || |||||  ||||||||||||||||||| ||||||    
T  49944839 tccggtcctatttataagaaaaatttaactttttagattcattgaataattgatgtatcttgtctagaatatagaccaaatacatcatttatacaatgaa 49944938  T
Q  419 tcaaaaa 425  Q
    |||||||    
T  49944939 tcaaaaa 49944945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 309 - 449
Target Start/End: Original strand, 26924209 - 26924350
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    |||||||||||||| ||| |||||||||||||| || | |||||| ||||||||||| ||| || ||  ||||||| |||||  ||||||||||||||||    
T  26924209 taatactccctccggtcctatttataagaaaaagttgactttttaaattcattgagtcattaatgtacttggtatagaatatagaccaaatacatcattt 26924308  T
Q  409 atagaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
    ||  |||||||| ||||||| |||||||  ||||| ||||||    
T  26924309 attcaatgaatcaaaaaagtcaaatgtttcttataaatagga 26924350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 312 - 425
Target Start/End: Complemental strand, 29256747 - 29256635
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||| |||||| ||| |||||||||||||| || | |||||||||||||||||||||| || | | |||||||||||| | ||||||||||||||||||     
T  29256747 tacttcctccggtcctatttataagaaaaagttgactttttagattcattgagtaattaatgtttttggtataaaataag-accaaatacatcatttatg 29256649  T
Q  412 gaatgaatcaaaaa 425  Q
     |||||||||||||    
T  29256648 caatgaatcaaaaa 29256635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 337 - 425
Target Start/End: Complemental strand, 38590190 - 38590102
Alignment:
Q  337 aaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||| ||||||||||||||||||||||||| ||| ||||||| |||||  ||||||||||| ||||||  |||||||||||||    
T  38590190 aaaaaattaactttttagattcattgagtaattgatgtatctggtatagaatatagaccaaatacattatttatgaaatgaatcaaaaa 38590102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 311 - 449
Target Start/End: Complemental strand, 44939216 - 44939077
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||| ||| |||||  |||||||||| |||||| ||||||||||||||||||||||||||| ||| |  | || |||||  ||||||||||||||||||    
T  44939216 atacttccttcgatcatatttataagagaaaattgattttttagattcattgagtaattgatgtatctaatctagaatatagaccaaatacatcatttat 44939117  T
Q  411 agaatgaat-caaaaagtaaaatgttgtttatatatagga 449  Q
    | |||||||  ||||||| |||||||  ||||| ||||||    
T  44939116 acaatgaataaaaaaagtcaaatgtttcttataaatagga 44939077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 329 - 449
Target Start/End: Original strand, 11386170 - 11386291
Alignment:
Q  329 tttataagaaaaaattaatttt-ttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaagt 427  Q
    |||||||||||||||| ||||| ||||||||||||| |||||||| | | |||| || |||||  || |||||||||||||||  |||||||||||||||    
T  11386170 tttataagaaaaaattgatttttttagattcattgaataattgatgtttctggtctagaatatagacgaaatacatcatttatgcaatgaatcaaaaagt 11386269  T
Q  428 aaaatgttgtttatatatagga 449  Q
     |||||||  ||||| ||||||    
T  11386270 caaatgtttcttataaatagga 11386291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 319 - 449
Target Start/End: Complemental strand, 519975 - 519844
Alignment:
Q  319 tccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaa 418  Q
    |||||||| |||||||||||||  |||| ||||||||||||||||||||||||| ||| |  | || |||||  | ||||||||||||||||| ||| ||    
T  519975 tccgatcctatttataagaaaattttaactttttagattcattgagtaattgatgtatcttatctagaatatagatcaaatacatcatttatacaataaa 519876  T
Q  419 tc-aaaaagtaaaatgttgtttatatatagga 449  Q
    || ||||||| |||||||  ||||| ||||||    
T  519875 tcaaaaaagtcaaatgtttattataaatagga 519844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 312 - 449
Target Start/End: Original strand, 34332475 - 34332613
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||||||||| |||  || ||||||||||  || | ||||||||||||||||||||||||| ||| | || || |||||  ||||||||||||||||||     
T  34332475 tactccctccaatcttatatataagaaaactttgactttttagattcattgagtaattgatgtattttgtctagaatatagaccaaatacatcatttatc 34332574  T
Q  412 gaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
     |||||||| ||||||| |||||||  ||||| ||||||    
T  34332575 caatgaatcaaaaaagtcaaatgtttcttataaatagga 34332613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 328 - 430
Target Start/End: Original strand, 23923565 - 23923668
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaag 426  Q
    |||||||||||||| || | |||||||||||||||||||||| || ||||| || || |||||  ||||||| ||||||||||  ||||||||| |||||    
T  23923565 atttataagaaaaatttgaatttttagattcattgagtaattaatgtatattgtctagaatatagaccaaatgcatcatttatgcaatgaatcagaaaag 23923664  T
Q  427 taaa 430  Q
    ||||    
T  23923665 taaa 23923668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 312 - 449
Target Start/End: Complemental strand, 38040425 - 38040287
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    |||| |||||| ||| |||||||||||||| || | |||||||||||||||| |||||||| ||| | || || |||||  | |||||| |||||||||     
T  38040425 tacttcctccggtcctatttataagaaaaatttgactttttagattcattgattaattgatgtatcttgtctagaatatagatcaaatatatcatttatg 38040326  T
Q  412 gaatgaatca-aaaagtaaaatgttgtttatatatagga 449  Q
     ||||||||| |||||| |||||||  ||||| ||||||    
T  38040325 caatgaatcaaaaaagtcaaatgtttcttataaatagga 38040287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 312 - 435
Target Start/End: Original strand, 26070823 - 26070947
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||  |||||||||  ||| || | ||||||||||||||||||||||||| ||| |  | || |||||  ||||||||||| ||||||     
T  26070823 tactccctccggtcttatttataagtgaaatttgactttttagattcattgagtaattgatgtatcttatctagaatatagaccaaatacattatttatg 26070922  T
Q  412 gaatgaatc-aaaaagtaaaatgtt 435  Q
     |||||||| |||||||||||||||    
T  26070923 caatgaatcaaaaaagtaaaatgtt 26070947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 311 - 425
Target Start/End: Original strand, 640520 - 640633
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||| |||||||   ||||||||||||||||| | |||||||||||| |||||||||||| ||| |  | ||||||||  || |||||||| ||||||    
T  640520 atactctctccgattttatttataagaaaaaattgactttttagattca-tgagtaattgatgtatcttatctaaaatatagactaaatacataatttat 640618  T
Q  411 agaatgaatcaaaaa 425  Q
    | ||||||| |||||    
T  640619 acaatgaatgaaaaa 640633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 410
Target Start/End: Complemental strand, 24305798 - 24305716
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||| |||||||| ||||||||||| ||| |||||||||||||| ||| | ||||| ||||| ||||  |||||||||||||    
T  24305798 atttagaagaaaaatttaattttttaaatttattgagtaattgatgtatcttgtatagaatataaaccttatacatcatttat 24305716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 333 - 425
Target Start/End: Original strand, 15342957 - 15343049
Alignment:
Q  333 taagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||| || | ||||||||||||||| |||||| || ||| | || || |||||  ||||||||||||||||||  |||||||||||||    
T  15342957 taagaaaaagttgaatttttagattcattgtgtaattaatgtatcttgtctagaatatagaccaaatacatcatttatgcaatgaatcaaaaa 15343049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 322 - 425
Target Start/End: Complemental strand, 34146943 - 34146841
Alignment:
Q  322 gatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca 421  Q
    ||||| ||||||||||||||||| ||||||| |||||||||| ||||| || ||| || | || |||||  | |||||||||||||| |  |||||||||    
T  34146943 gatcctatttataagaaaaaattgatttttttgattcattgaataattaatgtatttgatctagaatatatatcaaatacatcattt-tgtaatgaatca 34146845  T
Q  422 aaaa 425  Q
    ||||    
T  34146844 aaaa 34146841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 347 - 425
Target Start/End: Original strand, 6661548 - 6661626
Alignment:
Q  347 ttttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||||||||| ||||||| || ||| | ||||| |||||  ||||||||||||||||||  ||| |||||||||    
T  6661548 ttttttagattcatttagtaattaatgtatcttgtatagaatatagaccaaatacatcatttatgcaattaatcaaaaa 6661626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 406
Target Start/End: Complemental strand, 7375602 - 7375524
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcat 406  Q
    ||||||||||||||||| | ||||||||||||||| |||||| || ||| | || || ||||| |||||||||| ||||    
T  7375602 atttataagaaaaaattgactttttagattcattgtgtaattaatgtatcttgtctagaatataaaccaaatacttcat 7375524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 328 - 369
Target Start/End: Original strand, 8971243 - 8971284
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    ||||||||||||||||||| || |||||||||||||||||||    
T  8971243 atttataagaaaaaattaagttgttagattcattgagtaatt 8971284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 312 - 381
Target Start/End: Complemental strand, 29892279 - 29892210
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggt 381  Q
    ||||||||||| ||| ||||||| |||| |||| | |||||||||||||| | |||||||||||| ||||    
T  29892279 tactccctccggtcctatttataggaaacaattgactttttagattcattcaataattgatatatctggt 29892210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 308 - 369
Target Start/End: Complemental strand, 37515243 - 37515182
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    |||||||||| | || ||| |||||||||||||| |||| |||||||||||||| |||||||    
T  37515243 ataatactcctttcggtcctatttataagaaaaatttaactttttagattcattaagtaatt 37515182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 311 - 372
Target Start/End: Complemental strand, 43929495 - 43929434
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||| |||||| ||| |||||||||||||| |||| |||||||||||||| | ||||||||    
T  43929495 atactacctccggtcctatttataagaaaaagttaactttttagattcattcaataattgat 43929434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 328 - 435
Target Start/End: Original strand, 6793609 - 6793717
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaag 426  Q
    |||||||||||||| ||||||||||| ||||||||| ||||| || ||  | ||||| | |||    ||||||||||||||||  ||||||||| |||||    
T  6793609 atttataagaaaaagttaattttttaaattcattgaataattaatgtacttagtatatattataggtcaaatacatcatttatgcaatgaatcataaaag 6793708  T
Q  427 taaaatgtt 435  Q
    | |||||||    
T  6793709 ttaaatgtt 6793717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 309 - 369
Target Start/End: Complemental strand, 34890334 - 34890274
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    ||||||||||||||||   ||||||||||||||| || | ||||||||||||||| |||||    
T  34890334 taatactccctccgattacatttataagaaaaaaatactattttagattcattgaataatt 34890274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 341 - 425
Target Start/End: Original strand, 37178938 - 37179022
Alignment:
Q  341 aattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    ||||||||| ||| |||||||| |||||| || ||| | || ||||||||  || |||||||||||||||| ||| |||||||||    
T  37178938 aattaatttattaaattcattgtgtaattaatgtatcttgtctaaaatatagactaaatacatcatttatacaataaatcaaaaa 37179022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 376
Target Start/End: Complemental strand, 47844682 - 47844618
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatat 376  Q
    ||||||||||||||| || ||||||||| |||| | ||||| |||||||||| || |||||||||    
T  47844682 tactccctccgatcctatatataagaaacaatttacttttttgattcattgaatagttgatatat 47844618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 435
Target Start/End: Original strand, 47883978 - 47884085
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaagt 427  Q
    ||||||||||||||||| | |||||| ||| ||| |||||||||| ||| |  | ||| ||||  || ||||| || ||||||| ||| || ||||||||    
T  47883978 atttataagaaaaaattgactttttaaattaatttagtaattgatgtatcttatttaagatatagacaaaataaattatttatacaattaaccaaaaagt 47884077  T
Q  428 aaaatgtt 435  Q
    ||||||||    
T  47884078 aaaatgtt 47884085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 2351132 - 2351182
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattg 362  Q
    ||||||||||||||| |||||||||||| | |||| ||||| |||||||||    
T  2351132 tactccctccgatcctatttataagaaacatttaacttttttgattcattg 2351182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 369
Target Start/End: Complemental strand, 5368920 - 5368862
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    |||||||||||| ||  ||||||||| ||||||||| ||||||||| |||||| |||||    
T  5368920 atactccctccggtcatatttataagcaaaaattaactttttagatgcattgaataatt 5368862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Original strand, 8269383 - 8269433
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||| ||||||| |||| |||||||||| ||||||| ||||||    
T  8269383 accttgcatatattatgtattgtccttaccaactgagctaagttcacgagg 8269433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 27819445 - 27819347
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaat-acatcatttatagaatgaatcaaaaa 425  Q
    ||||| |||||||| |||| |||||||||||||||| || ||| | ||| | || |||||||| || ||||| | |||||||||  |||||||||||||    
T  27819445 atttacaagaaaaatttaactttttagattcattgaatatttggtgtattttgtctaaaatataaatcaaataatatcatttatgaaatgaatcaaaaa 27819347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 237 - 283
Target Start/End: Original strand, 32075256 - 32075302
Alignment:
Q  237 tgaaccttgcatatactatgtatcgtccctaccaactgaactaagtt 283  Q
    ||||||||||||||||||||||| |||| || ||||||| |||||||    
T  32075256 tgaaccttgcatatactatgtattgtccttatcaactgagctaagtt 32075302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 238 - 288
Target Start/End: Original strand, 45190282 - 45190332
Alignment:
Q  238 gaaccttgcatatactatgtatcgtccctaccaactgaactaagtttacga 288  Q
    |||||||||||||| |||| || |||| |||||||||||||||||| ||||    
T  45190282 gaaccttgcatatattatgcattgtccataccaactgaactaagttcacga 45190332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 307 - 403
Target Start/End: Complemental strand, 5891883 - 5891784
Alignment:
Q  307 tataatactccctccgatccaatttataagaaaaaa---ttaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacat 403  Q
    |||||||| || | |||||| |||||||| ||||||   | | ||||||| ||||||||| ||||| |||||| ||||||  ||||| ||||||||||||    
T  5891883 tataatacaccattcgatcctatttataaaaaaaaaagttgatttttttatattcattgattaattaatatatttggtattgaatataaaccaaatacat 5891784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 368
Target Start/End: Original strand, 10065253 - 10065310
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    |||||||||||| ||| ||||| |||| |||||| ||||||||||| |||||| ||||    
T  10065253 atactccctccggtcctatttacaagagaaaattgattttttagatacattgaataat 10065310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 372
Target Start/End: Complemental strand, 47678405 - 47678344
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||| |||||| ||| |||||||||||||| |||| |||| ||||||||| | ||||||||    
T  47678405 atactacctccggtcctatttataagaaaaatttaacttttgagattcattcaataattgat 47678344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 242 - 290
Target Start/End: Complemental strand, 4302496 - 4302448
Alignment:
Q  242 cttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||| |||| || |||| |||||||| ||||||||||||||||    
T  4302496 cttgcatatattatgcattgtccataccaactaaactaagtttacgagg 4302448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 369
Target Start/End: Original strand, 15699460 - 15699520
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaatt 369  Q
    |||||||||||||| |||   ||||||||||   || ||||||||||||||||||||||||    
T  15699460 taatactccctccggtccttattataagaaacttttgattttttagattcattgagtaatt 15699520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 309 - 381
Target Start/End: Complemental strand, 26924365 - 26924293
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggt 381  Q
    |||||||||||||| ||| |||||||||||| | || | ||||| |||||||||| ||| |||| ||| ||||    
T  26924365 taatactccctccggtcctatttataagaaacatttgacttttttgattcattgaataaatgatgtatttggt 26924293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Complemental strand, 27533291 - 27533239
Alignment:
Q  238 gaaccttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||||| |||| || ||||||||||||||| ||||| | ||||||    
T  27533291 gaaccttgcatatattatgcattgtccctaccaactgatctaagctcacgagg 27533239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 311 - 409
Target Start/End: Original strand, 28038819 - 28038919
Alignment:
Q  311 atactccctccgatc-caat-ttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    ||||||||||||||| || | ||||||| ||||||||| |||||||||||||| | ||| || | ||| ||||  | ||||| ||| |||||||||||||    
T  28038819 atactccctccgatcacagtattataagcaaaaattaactttttagattcattcattaaatgttgtatttggtcaataatataaactaaatacatcattt 28038918  T
Q  409 a 409  Q
    |    
T  28038919 a 28038919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 312 - 372
Target Start/End: Original strand, 34662681 - 34662741
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||||| | |||||||| ||||| |||| |||||||||||||| | ||||||||    
T  34662681 tactacctccgattctatttataaaaaaaagttaactttttagattcattcaataattgat 34662741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 1e-20; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 318 - 425
Target Start/End: Complemental strand, 10283437 - 10283330
Alignment:
Q  318 ctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatga 417  Q
    ||||| ||| ||||||||| |||||||||||||||| ||| |||||||||||||| ||||  || ||||||||  | |||||||||||||||||  ||||    
T  10283437 ctccggtcctatttataagcaaaaattaattttttaaatttattgagtaattgatgtatactgtctaaaatatatatcaaatacatcatttataccatga 10283338  T
Q  418 atcaaaaa 425  Q
    ||||||||    
T  10283337 atcaaaaa 10283330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 328 - 435
Target Start/End: Original strand, 30627838 - 30627946
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaag 426  Q
    |||||||||||||| || |||||||| ||| |||||||||||||| ||| | || ||||||||  ||||||||||||||||||  ||||||||| |||||    
T  30627838 atttataagaaaaatttgattttttatatttattgagtaattgatgtatcttgtctaaaatatagaccaaatacatcatttatgcaatgaatcagaaaag 30627937  T
Q  427 taaaatgtt 435  Q
    | |||||||    
T  30627938 tcaaatgtt 30627946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 311 - 449
Target Start/End: Original strand, 3064881 - 3065020
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||| ||||| | | ||||||||||||||||||  |||||||||||||||  ||||| || ||| | |||||||||||  |||||||||| |||||||    
T  3064881 atactctctccggttctatttataagaaaaaattatctttttagattcattgtataattaatgtatcttgtataaaatatagaccaaatacaccatttat 3064980  T
Q  411 agaatgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
      |||||||| |||||||||||| ||  ||||| ||||||    
T  3064981 gcaatgaatcaaaaaagtaaaatatttcttataaatagga 3065020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 425
Target Start/End: Complemental strand, 12999907 - 12999791
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaatttttt-agattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattt 408  Q
    ||||||||||||||||  ||||||||| |||| || | ||||| ||||||||||||||||| || ||  ||||||| |||||  | |||||||||| |||    
T  12999907 aatactccctccgatcttatttataagtaaaagttgactttttcagattcattgagtaattaatgtacttggtatagaatatagatcaaatacatctttt 12999808  T
Q  409 atagaatgaatcaaaaa 425  Q
    ||  |||||||||||||    
T  12999807 atgcaatgaatcaaaaa 12999791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 410
Target Start/End: Complemental strand, 2230499 - 2230400
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||| ||| |||||||||||||  || | |||||||||||||||||||||| || ||| | || || |||||  ||||| ||||||||||||    
T  2230499 atactccctccggtcctatttataagaaaactttgactttttagattcattgagtaattaatgtatcttgtctagaatatagaccaagtacatcatttat 2230400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 328 - 449
Target Start/End: Complemental strand, 17265854 - 17265732
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatca-aaaag 426  Q
    |||||||||||||| || |||||||| |||||| ||||||||||| ||| | || || |||||  || |||||| ||||||||  ||||||||| |||||    
T  17265854 atttataagaaaaatttgattttttaaattcatcgagtaattgatgtatcttgtctagaatatagactaaatacgtcatttatgcaatgaatcaaaaaag 17265755  T
Q  427 taaaatgttgtttatatatagga 449  Q
    | |||||||  ||||| ||||||    
T  17265754 tcaaatgtttcttataaatagga 17265732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 314 - 449
Target Start/End: Original strand, 28630754 - 28630890
Alignment:
Q  314 ctccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttataga 413  Q
    |||| |||| ||| |||||||||||||| || | |||||  |||||||||||||||||| ||| | || || |||||  ||||||||||| ||||||  |    
T  28630754 ctccttccggtcctatttataagaaaaatttgactttttttattcattgagtaattgatgtatcttgtctataatatagaccaaatacataatttatgca 28630853  T
Q  414 atgaatc-aaaaagtaaaatgttgtttatatatagga 449  Q
    ||||||| ||||||| || ||||  ||||| ||||||    
T  28630854 atgaatctaaaaagtcaattgtttcttataaatagga 28630890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 310 - 425
Target Start/End: Original strand, 2972161 - 2972276
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    |||||||| |||| ||  |||||||||| ||| || | |||||||||| |||||||||||| | ||| |  | ||||||||  || ||||||||||||||    
T  2972161 aatactccatccggtcttatttataagagaaatttgactttttagatttattgagtaattggtgtatcttatctaaaatatagacaaaatacatcattta 2972260  T
Q  410 tagaatgaatcaaaaa 425  Q
    |  |||||||||||||    
T  2972261 tgcaatgaatcaaaaa 2972276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 328 - 419
Target Start/End: Original strand, 7649814 - 7649905
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaat 419  Q
    |||||||| ||| |||||  |||||||||||||||| |||||||| ||| |||| ||||||||  |||||||| |||| ||||  |||||||    
T  7649814 atttataataaataattatctttttagattcattgaataattgatgtatttggtctaaaatatataccaaataaatcaattattcaatgaat 7649905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 309 - 372
Target Start/End: Complemental strand, 8646830 - 8646767
Alignment:
Q  309 taatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||||||||||||||||| |||||||||||||| |||  |||||||||| ||| | ||||||||    
T  8646830 taatactccctccgatcctatttataagaaaaagttatctttttagatttatttaataattgat 8646767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 372
Target Start/End: Original strand, 2810073 - 2810138
Alignment:
Q  307 tataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| |||||||| || ||| |||||||| ||||| ||||||||||||||||||| | ||||||||    
T  2810073 tatagtactcccttcggtcctatttataaaaaaaagttaattttttagattcattcaataattgat 2810138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 330 - 423
Target Start/End: Original strand, 28863337 - 28863430
Alignment:
Q  330 ttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaa 423  Q
    |||||||| |||||| ||||||||| |||||||  ||||| || ||| | || || ||||| |||||||||||||||||||  ||| |||||||    
T  28863337 ttataagataaaattgattttttagtttcattgtataatttatgtatcttgtctagaatataaaccaaatacatcatttatgcaataaatcaaa 28863430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 312 - 372
Target Start/End: Complemental strand, 1837108 - 1837048
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    |||| ||||||| || |||||||||||||| ||||||||||||||| ||| | ||||||||    
T  1837108 tactacctccgaccctatttataagaaaaagttaattttttagatttattcaataattgat 1837048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 241 - 281
Target Start/End: Original strand, 14917791 - 14917831
Alignment:
Q  241 ccttgcatatactatgtatcgtccctaccaactgaactaag 281  Q
    ||||||||||| ||||||||||||||||||||||| |||||    
T  14917791 ccttgcatatattatgtatcgtccctaccaactgagctaag 14917831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 311 - 419
Target Start/End: Complemental strand, 16121111 - 16121003
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    |||||||||||||||    ||||||| |||||| || |||||||||||||| | ||| |||| ||| ||||  | |||||  ||||| ||||||||||||    
T  16121111 atactccctccgatcactattataagcaaaaatcaactttttagattcattaaataaatgatgtatttggtcaataatatagaccaagtacatcatttat 16121012  T
Q  411 agaatgaat 419  Q
     ||||||||    
T  16121011 tgaatgaat 16121003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 328 - 449
Target Start/End: Complemental strand, 33120035 - 33119915
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaa-aag 426  Q
    |||||||||||||  || | |||||||||||||||| |||| ||| ||| | ||   ||||||  |||||||||| |||||||| ||||||||||| |||    
T  33120035 atttataagaaaattttgactttttagattcattgaataatcgatgtatcttgtc--aaatatagaccaaatacaacatttatacaatgaatcaaagaag 33119938  T
Q  427 taaaatgttgtttatatatagga 449  Q
    | |||||||  ||||| ||||||    
T  33119937 tcaaatgtttcttataaatagga 33119915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 311 - 425
Target Start/End: Original strand, 30895182 - 30895296
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttat 410  Q
    ||||||| | |||||  |||||||||||||| || | |||||| ||||||||   |||| || ||  ||||||| |||||  |||||||| |||||||||    
T  30895182 atactccattcgatcatatttataagaaaaagttgaatttttaaattcattggacaattaatgtacttggtatagaatatagaccaaatatatcatttat 30895281  T
Q  411 agaatgaatcaaaaa 425  Q
      |||||||||||||    
T  30895282 gcaatgaatcaaaaa 30895296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 240 - 290
Target Start/End: Complemental strand, 34701193 - 34701143
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    |||||||||||| |||| || || |||||||||||||||||||| ||||||    
T  34701193 accttgcatatattatgcattgttcctaccaactgaactaagttcacgagg 34701143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 281
Target Start/End: Original strand, 8637452 - 8637493
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaag 281  Q
    |||||||||||| |||| || |||||||||||||||||||||    
T  8637452 accttgcatatattatgcattgtccctaccaactgaactaag 8637493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 240 - 281
Target Start/End: Complemental strand, 21847240 - 21847199
Alignment:
Q  240 accttgcatatactatgtatcgtccctaccaactgaactaag 281  Q
    |||||||||||| ||||||| ||||||||||||||| |||||    
T  21847240 accttgcatatattatgtattgtccctaccaactgagctaag 21847199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 4143772 - 4143824
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattg 362  Q
    ||||||||||||||||  ||||||||| ||||| ||| |||||||||| ||||    
T  4143772 aatactccctccgatcacatttataagcaaaaaataaatttttagatttattg 4143824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 238 - 290
Target Start/End: Original strand, 5655320 - 5655372
Alignment:
Q  238 gaaccttgcatatactatgtatcgtccctaccaactgaactaagtttacgagg 290  Q
    ||||| |||||||| ||||||| ||||||||||||||| ||||| | ||||||    
T  5655320 gaaccgtgcatatattatgtattgtccctaccaactgagctaagctcacgagg 5655372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 328 - 425
Target Start/End: Complemental strand, 7649934 - 7649835
Alignment:
Q  328 atttataagaaaaaattaatttttt--agattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||| ||||||| ||||||||||||  | ||||||||| |||||||| ||| ||||||| | | |  ||||||||||||| ||||  |||||||| ||||    
T  7649934 atttctaagaaataattaattttttttaaattcattgaataattgatttatttggtatatattttagaccaaatacatcaattattcaatgaatctaaaa 7649835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 308 - 368
Target Start/End: Original strand, 24949626 - 24949686
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    ||||||||||||||| ||| ||||| |||| |||||| | ||||||||| |||||| ||||    
T  24949626 ataatactccctccggtcctatttacaagagaaaattgactttttagatacattgaataat 24949686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 337 - 377
Target Start/End: Original strand, 25538006 - 25538046
Alignment:
Q  337 aaaaaattaattttttagattcattgagtaattgatatata 377  Q
    |||||||| | ||||||||||||||||||||||||| ||||    
T  25538006 aaaaaattgactttttagattcattgagtaattgatgtata 25538046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 49; Significance: 8e-19; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 308 - 372
Target Start/End: Complemental strand, 1685 - 1621
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||||||||||||| ||  |||||||||||||||||||||||||||||||||||| ||||||||    
T  1685 ataatactccctccggtcttatttataagaaaaaattaattttttagattcattgaataattgat 1621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 308 - 425
Target Start/End: Original strand, 40140 - 40258
Alignment:
Q  308 ataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatca-t 406  Q
    ||||||||| ||||| | | ||||||||| ||||||||| | ||||||||||||  ||||||||| ||| || ||||||||||  ||||||||||||| |    
T  40140 ataatactctctccggttctatttataaggaaaaattaactctttagattcattatgtaattgatgtatctgatataaaatatagaccaaatacatcatt 40239  T
Q  407 ttatagaatgaatcaaaaa 425  Q
    |||| |||||||| |||||    
T  40240 ttatggaatgaattaaaaa 40258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 310 - 449
Target Start/End: Complemental strand, 156919 - 156779
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    ||||||| || || ||| ||||||||||||||||  ||||||||| |||||||||||||| || ||  ||||||| |||||  |||||||| ||| ||||    
T  156919 aatactcactgcggtcctatttataagaaaaaatagattttttagtttcattgagtaattaatgtacttggtatagaatatagaccaaatatatcgttta 156820  T
Q  410 tagaatgaa-tcaaaaagtaaaatgttgtttatatatagga 449  Q
    |  |||||| | ||||||| |||||||  ||||| ||||||    
T  156819 tgcaatgaattaaaaaagttaaatgtttcttataaatagga 156779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 311 - 425
Target Start/End: Complemental strand, 72000 - 71885
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaa-ttaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    ||||| |||||||||| |||||| | |||||| || |||| ||| |||||||| |||||| || ||| | |||||||||||  || |||||||| |||||    
T  72000 atacttcctccgatcctatttattaaaaaaaagttgatttattaaattcattgtgtaattaatgtattttgtataaaatatagactaaatacataattta 71901  T
Q  410 tagaatgaatcaaaaa 425  Q
    || |||||||||||||    
T  71900 tacaatgaatcaaaaa 71885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 312 - 362
Target Start/End: Original strand, 71848 - 71898
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattg 362  Q
    |||||||| |||||| |||||||||||||  |||||||||| |||||||||    
T  71848 tactcccttcgatcctatttataagaaaattttaatttttttgattcattg 71898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 328 - 425
Target Start/End: Original strand, 16544 - 16641
Alignment:
Q  328 atttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| |||| |||||  ||||||||||||||||||  || | |  || |||||  ||||||||||| ||||||| |||||||||||||    
T  16544 atttataagaaaaatttaacttttttaattcattgagtaattgatgcatcttgactagaatatagaccaaatacattatttatacaatgaatcaaaaa 16641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 312 - 421
Target Start/End: Complemental strand, 28238 - 28129
Alignment:
Q  312 tactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttata 411  Q
    ||||||||||| ||| || ||||||||||| || | |||| | ||| ||||| |||||||||||| | || ||||||||  | ||||||||||||||||     
T  28238 tactccctccggtcctatatataagaaaaatttgacttttaaaatttattgaataattgatatatcttgtctaaaatatagatcaaatacatcatttatg 28139  T
Q  412 gaatgaatca 421  Q
     |||||||||    
T  28138 caatgaatca 28129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 310 - 425
Target Start/End: Complemental strand, 16799 - 16687
Alignment:
Q  310 aatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcattta 409  Q
    ||||||||||||| ||| |||||||||||||| | | |||   | |||||||||||||||||| ||| | || || |||||  |||||||||||  ||||    
T  16799 aatactccctccggtcctatttataagaaaaattgacttt---aaattcattgagtaattgatgtatcttgtctagaatatagaccaaatacatatttta 16703  T
Q  410 tagaatgaatcaaaaa 425  Q
    |  |||||||||||||    
T  16702 tgcaatgaatcaaaaa 16687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 368
Target Start/End: Original strand, 492296 - 492360
Alignment:
Q  304 taatataatactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaat 368  Q
    |||||| |||||||||||| ||| |||||||||| ||| || ||||||||||| |||||| ||||    
T  492296 taatatcatactccctccggtcctatttataagagaaagttgattttttagatacattgaataat 492360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1266 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1266
Description:

Target: scaffold1266; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 425
Target Start/End: Complemental strand, 239 - 162
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| | ||| |||| ||| |||| || ||||||||||| |||||| ||||||  |||||||| ||||    
T  239 tttttagattcattcaataaatgatgtatgtggtctataatatgaaccacatacataatttattaaatgaatctaaaa 162  T

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Target: scaffold0263 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 348 - 425
Target Start/End: Original strand, 19824 - 19901
Alignment:
Q  348 tttttagattcattgagtaattgatatatatggtataaaatatgaaccaaatacatcatttatagaatgaatcaaaaa 425  Q
    |||||||||||||| | ||| |||| ||| |||| || ||||||||||| |||||| ||||||  |||||||| ||||    
T  19824 tttttagattcattaaataaatgatgtatgtggtctataatatgaaccacatacataatttattaaatgaatctaaaa 19901  T

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Target: scaffold0242 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 372
Target Start/End: Original strand, 16505 - 16566
Alignment:
Q  311 atactccctccgatccaatttataagaaaaaattaattttttagattcattgagtaattgat 372  Q
    ||||| |||||  ||| ||||| |||||||| ||||||||||||||||||| | ||||||||    
T  16505 atactacctccagtcctatttacaagaaaaagttaattttttagattcattcaataattgat 16566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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