View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7721_low_39 (Length: 418)

Name: NF7721_low_39
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7721_low_39
NF7721_low_39
[»] chr5 (39 HSPs)
chr5 (1-418)||(10298256-10298654)
chr5 (165-240)||(9747143-9747218)
chr5 (298-391)||(8419992-8420085)
chr5 (318-391)||(21351906-21351979)
chr5 (319-403)||(31084309-31084393)
chr5 (204-266)||(10290202-10290264)
chr5 (83-155)||(9747249-9747320)
chr5 (326-391)||(42893353-42893418)
chr5 (320-391)||(6247609-6247680)
chr5 (317-391)||(21191057-21191131)
chr5 (317-386)||(14674253-14674322)
chr5 (328-385)||(15405062-15405119)
chr5 (317-385)||(39698525-39698593)
chr5 (317-391)||(13287400-13287474)
chr5 (319-377)||(41995457-41995515)
chr5 (334-391)||(21576746-21576803)
chr5 (326-391)||(33178018-33178083)
chr5 (326-398)||(41633728-41633800)
chr5 (328-402)||(5894823-5894897)
chr5 (1-63)||(10290138-10290200)
chr5 (317-391)||(21522734-21522808)
chr5 (317-391)||(21533300-21533374)
chr5 (326-391)||(30135306-30135372)
chr5 (330-391)||(7677702-7677763)
chr5 (306-375)||(17925189-17925258)
chr5 (331-391)||(21542028-21542088)
chr5 (304-391)||(3966474-3966561)
chr5 (317-384)||(4105241-4105310)
chr5 (332-386)||(12159951-12160005)
chr5 (328-366)||(18316951-18316989)
chr5 (317-391)||(19579685-19579759)
chr5 (320-386)||(24906307-24906373)
chr5 (317-391)||(37328845-37328919)
chr5 (317-386)||(17177029-17177098)
chr5 (308-377)||(30098301-30098370)
chr5 (317-365)||(6770527-6770575)
chr5 (317-365)||(19552570-19552618)
chr5 (331-391)||(30183547-30183607)
chr5 (340-384)||(43001807-43001851)
[»] chr6 (34 HSPs)
chr6 (298-391)||(7801157-7801250)
chr6 (284-403)||(12696277-12696394)
chr6 (284-391)||(28715243-28715353)
chr6 (320-386)||(1681745-1681811)
chr6 (317-391)||(9107371-9107445)
chr6 (317-391)||(15489733-15489807)
chr6 (317-391)||(34595118-34595192)
chr6 (318-391)||(10770675-10770748)
chr6 (318-391)||(16766682-16766755)
chr6 (284-384)||(8776981-8777086)
chr6 (319-386)||(16833294-16833361)
chr6 (317-391)||(426515-426589)
chr6 (317-391)||(8365520-8365594)
chr6 (320-391)||(17302543-17302615)
chr6 (317-383)||(17841598-17841664)
chr6 (317-391)||(28152083-28152156)
chr6 (320-386)||(31959146-31959212)
chr6 (326-391)||(853860-853925)
chr6 (326-391)||(7977831-7977896)
chr6 (336-385)||(31384923-31384972)
chr6 (326-418)||(2117069-2117160)
chr6 (331-386)||(1191706-1191761)
chr6 (326-391)||(4877935-4878001)
chr6 (298-391)||(7027206-7027300)
chr6 (318-392)||(7938101-7938175)
chr6 (341-384)||(4118341-4118384)
chr6 (298-377)||(34225824-34225906)
chr6 (317-391)||(3398603-3398676)
chr6 (317-391)||(7930289-7930363)
chr6 (340-386)||(9522898-9522944)
chr6 (326-391)||(33001290-33001355)
chr6 (332-380)||(5970120-5970168)
chr6 (333-377)||(24115862-24115906)
chr6 (326-386)||(30866150-30866210)
[»] chr7 (35 HSPs)
chr7 (306-398)||(9408328-9408420)
chr7 (320-385)||(35861951-35862016)
chr7 (327-391)||(3991318-3991382)
chr7 (317-391)||(11061077-11061151)
chr7 (317-391)||(18215187-18215261)
chr7 (284-386)||(24105631-24105731)
chr7 (317-402)||(13770675-13770760)
chr7 (326-391)||(24339635-24339700)
chr7 (331-391)||(7438704-7438764)
chr7 (298-402)||(9778462-9778569)
chr7 (326-384)||(25481895-25481953)
chr7 (317-391)||(27945025-27945099)
chr7 (318-403)||(5409825-5409910)
chr7 (326-383)||(8234139-8234196)
chr7 (320-403)||(32094009-32094093)
chr7 (284-391)||(43027470-43027576)
chr7 (304-391)||(11665441-11665528)
chr7 (320-391)||(33994199-33994270)
chr7 (304-382)||(11831404-11831481)
chr7 (340-386)||(26033467-26033513)
chr7 (326-391)||(7197298-7197363)
chr7 (319-391)||(6630913-6630985)
chr7 (326-398)||(25822648-25822720)
chr7 (331-391)||(11272587-11272649)
chr7 (319-365)||(29763201-29763247)
chr7 (317-387)||(43249977-43250047)
chr7 (169-219)||(48522878-48522928)
chr7 (319-364)||(21826259-21826304)
chr7 (336-384)||(7058429-7058477)
chr7 (317-365)||(10042921-10042969)
chr7 (319-398)||(21560484-21560568)
chr7 (317-377)||(29787384-29787444)
chr7 (326-386)||(40287363-40287422)
chr7 (167-219)||(46392597-46392649)
chr7 (347-391)||(48438560-48438604)
[»] chr1 (49 HSPs)
chr1 (311-385)||(32434723-32434798)
chr1 (284-391)||(38078662-38078769)
chr1 (304-391)||(37598803-37598889)
chr1 (319-391)||(22881617-22881689)
chr1 (308-391)||(31672896-31672979)
chr1 (328-391)||(40258934-40258997)
chr1 (317-391)||(1704993-1705067)
chr1 (333-391)||(24577187-24577245)
chr1 (333-397)||(28273083-28273147)
chr1 (317-392)||(1815241-1815316)
chr1 (304-391)||(46348384-46348470)
chr1 (326-384)||(113292-113350)
chr1 (333-403)||(1486698-1486768)
chr1 (304-382)||(18556466-18556543)
chr1 (326-384)||(32461471-32461529)
chr1 (317-391)||(42359450-42359524)
chr1 (284-377)||(398780-398878)
chr1 (299-391)||(24334706-24334799)
chr1 (326-386)||(21378571-21378631)
chr1 (319-391)||(47989484-47989555)
chr1 (328-391)||(6332666-6332728)
chr1 (333-391)||(18190109-18190167)
chr1 (333-391)||(22515888-22515946)
chr1 (342-391)||(18337338-18337387)
chr1 (317-398)||(38503304-38503385)
chr1 (317-386)||(48450593-48450662)
chr1 (331-391)||(51410022-51410083)
chr1 (334-386)||(31015044-31015096)
chr1 (317-377)||(34298420-34298480)
chr1 (331-385)||(6427459-6427516)
chr1 (326-385)||(14359529-14359587)
chr1 (319-386)||(30359374-30359441)
chr1 (168-219)||(36033560-36033611)
chr1 (319-377)||(2288182-2288240)
chr1 (317-391)||(5376501-5376575)
chr1 (341-391)||(6612172-6612222)
chr1 (284-387)||(3490395-3490497)
chr1 (340-385)||(5927347-5927392)
chr1 (307-376)||(9828019-9828087)
chr1 (50-99)||(16119091-16119140)
chr1 (326-391)||(19058857-19058922)
chr1 (49-138)||(21623678-21623767)
chr1 (304-403)||(35919265-35919370)
chr1 (298-391)||(36878427-36878519)
chr1 (336-384)||(2283669-2283717)
chr1 (317-377)||(6427334-6427394)
chr1 (317-365)||(9103624-9103672)
chr1 (317-365)||(16812527-16812575)
chr1 (333-391)||(17778549-17778604)
[»] scaffold0011 (1 HSPs)
scaffold0011 (306-392)||(17749-17835)
[»] chr2 (32 HSPs)
chr2 (284-385)||(21374706-21374807)
chr2 (304-391)||(37558949-37559035)
chr2 (317-391)||(15657848-15657922)
chr2 (317-418)||(19536376-19536473)
chr2 (317-391)||(30717531-30717605)
chr2 (317-391)||(15972857-15972931)
chr2 (34-104)||(16021964-16022034)
chr2 (317-391)||(18421947-18422021)
chr2 (317-391)||(30335401-30335475)
chr2 (317-386)||(6940239-6940308)
chr2 (318-391)||(18841014-18841087)
chr2 (317-386)||(23718010-23718079)
chr2 (317-386)||(24105682-24105751)
chr2 (317-386)||(30404856-30404925)
chr2 (331-391)||(20473320-20473380)
chr2 (332-391)||(974746-974805)
chr2 (304-383)||(37419714-37419793)
chr2 (333-391)||(2438720-2438778)
chr2 (317-391)||(20539675-20539749)
chr2 (298-391)||(26769471-26769569)
chr2 (326-391)||(12668424-12668489)
chr2 (333-386)||(12940941-12940994)
chr2 (319-384)||(38117167-38117232)
chr2 (319-391)||(36756345-36756417)
chr2 (331-391)||(5040730-5040792)
chr2 (76-158)||(14117731-14117814)
chr2 (284-402)||(14996213-14996330)
chr2 (317-391)||(23058443-23058518)
chr2 (333-391)||(11223864-11223922)
chr2 (319-384)||(29176501-29176566)
chr2 (317-385)||(21091707-21091775)
chr2 (165-217)||(33599016-33599068)
[»] chr8 (34 HSPs)
chr8 (317-391)||(22651960-22652034)
chr8 (304-384)||(36450762-36450841)
chr8 (312-383)||(30271300-30271371)
chr8 (317-391)||(15816130-15816204)
chr8 (322-391)||(4298887-4298956)
chr8 (284-391)||(25566789-25566899)
chr8 (332-391)||(29447111-29447170)
chr8 (317-391)||(18170483-18170557)
chr8 (317-391)||(18634051-18634125)
chr8 (319-385)||(22197749-22197815)
chr8 (321-391)||(24613509-24613578)
chr8 (338-391)||(4948657-4948710)
chr8 (318-391)||(13436965-13437038)
chr8 (317-386)||(25192353-25192422)
chr8 (317-386)||(29510310-29510379)
chr8 (332-391)||(2572057-2572116)
chr8 (328-391)||(8342967-8343030)
chr8 (326-385)||(8343309-8343368)
chr8 (317-391)||(5813576-5813650)
chr8 (317-391)||(20873053-20873127)
chr8 (309-384)||(21465391-21465463)
chr8 (320-384)||(22595981-22596045)
chr8 (331-387)||(41831945-41832001)
chr8 (331-386)||(18407717-18407772)
chr8 (340-391)||(28745505-28745556)
chr8 (321-391)||(31556985-31557054)
chr8 (340-385)||(30077394-30077439)
chr8 (42-90)||(9706796-9706844)
chr8 (332-384)||(17468516-17468568)
chr8 (317-361)||(24196628-24196672)
chr8 (326-386)||(31236583-31236643)
chr8 (317-377)||(36934654-36934714)
chr8 (342-386)||(40332200-40332244)
chr8 (319-387)||(44067502-44067570)
[»] chr3 (44 HSPs)
chr3 (304-398)||(34910289-34910382)
chr3 (320-391)||(10954939-10955010)
chr3 (317-391)||(10335287-10335361)
chr3 (317-391)||(55401059-55401133)
chr3 (320-384)||(4987299-4987363)
chr3 (326-385)||(14209106-14209165)
chr3 (319-386)||(20503451-20503518)
chr3 (317-391)||(8587022-8587096)
chr3 (306-391)||(25775481-25775567)
chr3 (317-391)||(28917985-28918059)
chr3 (284-385)||(14216845-14216944)
chr3 (284-385)||(14222974-14223073)
chr3 (299-391)||(21479079-21479176)
chr3 (333-386)||(26508110-26508163)
chr3 (326-391)||(28812508-28812573)
chr3 (284-391)||(39756188-39756294)
chr3 (331-400)||(49651778-49651847)
chr3 (306-362)||(10318064-10318119)
chr3 (284-381)||(14747513-14747610)
chr3 (319-391)||(14829676-14829747)
chr3 (319-391)||(16000017-16000089)
chr3 (306-377)||(21305218-21305290)
chr3 (340-416)||(25948863-25948939)
chr3 (331-387)||(35994743-35994798)
chr3 (328-391)||(1509534-1509597)
chr3 (318-385)||(10268493-10268560)
chr3 (326-385)||(14832092-14832151)
chr3 (328-391)||(51206354-51206417)
chr3 (308-365)||(8412972-8413029)
chr3 (333-386)||(21256992-21257045)
chr3 (299-385)||(32400715-32400798)
chr3 (319-391)||(41961651-41961723)
chr3 (332-391)||(750619-750678)
chr3 (328-391)||(7928445-7928508)
chr3 (317-391)||(15796295-15796369)
chr3 (317-387)||(24205046-24205116)
chr3 (317-391)||(26492206-26492280)
chr3 (319-365)||(40052318-40052364)
chr3 (331-376)||(14979179-14979224)
chr3 (326-391)||(34185124-34185189)
chr3 (332-384)||(3164033-3164085)
chr3 (318-386)||(17005625-17005693)
chr3 (331-391)||(27505244-27505304)
chr3 (326-386)||(29508437-29508497)
[»] scaffold0103 (1 HSPs)
scaffold0103 (317-384)||(51795-51862)
[»] chr4 (40 HSPs)
chr4 (317-418)||(30298930-30299033)
chr4 (317-418)||(30327798-30327901)
chr4 (326-403)||(12895105-12895182)
chr4 (332-391)||(24613702-24613761)
chr4 (306-384)||(11596360-11596438)
chr4 (317-391)||(12797339-12797412)
chr4 (317-391)||(23292987-23293061)
chr4 (309-386)||(24543957-24544035)
chr4 (333-391)||(54580024-54580082)
chr4 (319-384)||(19482654-19482719)
chr4 (319-384)||(40481623-40481687)
chr4 (331-403)||(3947755-3947827)
chr4 (331-391)||(21945501-21945561)
chr4 (41-127)||(51978594-51978683)
chr4 (323-384)||(715615-715677)
chr4 (323-384)||(752941-753003)
chr4 (298-391)||(4157112-4157207)
chr4 (319-385)||(14126118-14126184)
chr4 (340-386)||(29205451-29205497)
chr4 (317-391)||(35157986-35158060)
chr4 (326-391)||(2361976-2362041)
chr4 (334-379)||(14465088-14465133)
chr4 (340-385)||(28964255-28964300)
chr4 (284-365)||(32273553-32273633)
chr4 (317-385)||(4383352-4383419)
chr4 (306-366)||(11110708-11110768)
chr4 (311-391)||(16073373-16073452)
chr4 (317-387)||(20633469-20633536)
chr4 (326-385)||(28084514-28084574)
chr4 (326-386)||(31800484-31800544)
chr4 (331-391)||(34306805-34306864)
chr4 (326-385)||(38847019-38847078)
chr4 (317-391)||(49431009-49431084)
chr4 (318-384)||(27706185-27706251)
chr4 (341-386)||(6485617-6485662)
chr4 (326-391)||(12895275-12895340)
chr4 (305-384)||(37203239-37203315)
chr4 (40-99)||(3929573-3929630)
chr4 (317-377)||(36635308-36635368)
chr4 (328-384)||(51701253-51701309)
[»] scaffold0361 (1 HSPs)
scaffold0361 (326-383)||(14523-14580)
[»] scaffold0018 (1 HSPs)
scaffold0018 (317-385)||(178825-178894)
[»] scaffold0223 (1 HSPs)
scaffold0223 (317-385)||(20156-20224)
[»] scaffold0306 (1 HSPs)
scaffold0306 (317-391)||(13384-13458)
[»] scaffold0152 (1 HSPs)
scaffold0152 (317-391)||(21869-21943)
[»] scaffold0007 (1 HSPs)
scaffold0007 (317-387)||(225273-225343)
[»] scaffold0246 (1 HSPs)
scaffold0246 (319-384)||(19562-19626)
[»] scaffold0122 (1 HSPs)
scaffold0122 (326-391)||(8003-8067)
[»] scaffold0025 (1 HSPs)
scaffold0025 (304-391)||(23740-23828)
[»] scaffold0027 (1 HSPs)
scaffold0027 (284-391)||(46628-46740)
[»] scaffold0793 (1 HSPs)
scaffold0793 (323-384)||(4891-4953)
[»] scaffold0652 (1 HSPs)
scaffold0652 (317-391)||(463-537)
[»] scaffold0053 (1 HSPs)
scaffold0053 (317-391)||(8782-8856)
[»] scaffold0311 (1 HSPs)
scaffold0311 (317-354)||(10509-10546)
[»] scaffold0004 (1 HSPs)
scaffold0004 (317-385)||(92791-92859)
[»] scaffold0171 (1 HSPs)
scaffold0171 (284-403)||(23373-23490)
[»] scaffold0021 (1 HSPs)
scaffold0021 (331-386)||(130480-130535)
[»] scaffold0227 (1 HSPs)
scaffold0227 (326-384)||(7319-7377)
[»] scaffold0066 (1 HSPs)
scaffold0066 (326-380)||(33375-33429)
[»] scaffold0003 (1 HSPs)
scaffold0003 (317-391)||(241578-241652)
[»] scaffold0187 (1 HSPs)
scaffold0187 (166-219)||(4567-4620)
[»] scaffold0450 (1 HSPs)
scaffold0450 (331-391)||(8636-8696)
[»] scaffold0136 (1 HSPs)
scaffold0136 (341-385)||(3856-3900)
[»] scaffold0062 (1 HSPs)
scaffold0062 (165-205)||(332-372)
[»] scaffold0020 (1 HSPs)
scaffold0020 (319-391)||(135313-135385)


Alignment Details
Target: chr5 (Bit Score: 316; Significance: 1e-178; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 1 - 418
Target Start/End: Original strand, 10298256 - 10298654
Alignment:
Q  1 caacaggtaaaaatattccgtccgttccttcttattgtcgttttaagattatttacacataataagaaaactagtaaatttcgttacttttgatgaaatc 100  Q
    ||||||||||||||| |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10298256 caacaggtaaaaatactccgtccgttccttcttattgttgttttaatattatttacacataataagaaaactagtaaatttcgttacttttgatgaaatc 10298355  T
Q  101 atttctttttctattatacccttaactttttattatcttgttctatctacttatctctttgcaatattgacaaaataatagttaatgttgcattaaaatt 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  10298356 atttctttttctattatacccttaactttttattatcttgttctatctacttatccctttgcaatattgacaaaataatagttaatgttgcattaaaatt 10298455  T
Q  201 taaaaacaacaaataaatatgaaagaattcttgtgcagaagcgacacttaaaaaggaatgaggatttgagagggagtatgaccatgaagcacggatgcgg 300  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||       
T  10298456 taaaaacaacaaataaatatgaaagaattcttctgcagaagcgacacttaaaaaggaatgaggattggagagggagtatgaccatgaagcacggatg--- 10298552  T
Q  301 atgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggac 400  Q
                    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||    
T  10298553 ----------------cggacactaacacgccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcggtgtcgtatcggac 10298636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 165 - 240
Target Start/End: Complemental strand, 9747218 - 9747143
Alignment:
Q  165 tattgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaatatgaaagaattcttgtgcagaa 240  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |||||||| |||||||    
T  9747218 tattgacaaaataatagttaatgttgcattaaaatttaaaaacgacaaataagtatgaacgaattcttctgcagaa 9747143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 8419992 - 8420085
Alignment:
Q  298 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| ||||||||||||||||||| | |||| |||||| | |||||||||||||||| | ||||||| |||||||||||||||||||| ||||    
T  8419992 cggatacggacacggacaccggacaatgacacgccgacatagctaataatttgaaaaaataacataattcaatgtaattacaagtgtcggtgtc 8420085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 318 - 391
Target Start/End: Complemental strand, 21351979 - 21351906
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||| ||||||||||||||||||||||| |||||||||||||||| || ||||||||||||||||| ||||    
T  21351979 ggacactgacacaccgacacaactaataattggaaaaagtcacataattcagtgtaattacaagtgtcggtgtc 21351906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 319 - 403
Target Start/End: Original strand, 31084309 - 31084393
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 403  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||||| |||||||||||||||||||| |||| | |||||||||    
T  31084309 gacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagtgtcgatgtcgtgtcggacacg 31084393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 204 - 266
Target Start/End: Original strand, 10290202 - 10290264
Alignment:
Q  204 aaacaacaaataaatatgaaagaattcttgtgcagaagcgacacttaaaaaggaatgaggatt 266  Q
    |||||||||||||||||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  10290202 aaacaacaaataaatatgaacgaattcttatgcagaagcgacatttaaaaaggaatgaggatt 10290264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 83 - 155
Target Start/End: Complemental strand, 9747320 - 9747249
Alignment:
Q  83 gttacttttgatgaaatcatttctttttctattatacccttaactttttattatcttgttctatctacttatc 155  Q
    ||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||    
T  9747320 gttacttttgatgaaattatttctttttctataatacccttaa-tttttattatcttgttccatctatttatc 9747249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 42893353 - 42893418
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  42893353 acacaccgacacagctaataatttgaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 42893418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 6247609 - 6247680
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  6247609 acactgacacgccgacacatctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 6247680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 21191131 - 21191057
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||  |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  21191131 cggacactgacatgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 21191057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 14674253 - 14674322
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| |||| |||||||| |||||||||||||||| |||||||||  | |||||||||||||||||    
T  14674253 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 14674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 328 - 385
Target Start/End: Complemental strand, 15405119 - 15405062
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||| ||||||||||||||||||||||| ||| ||||| |||||||||||||||||||    
T  15405119 acactgacacaactaataatttgaaaaaatcatataattcaatgtaattacaagtgtc 15405062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 39698525 - 39698593
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||| |||| | |||||| |||||||||||||||| ||||||||| || ||||||||||||||||    
T  39698525 cggacactgacacgctgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 39698593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 13287474 - 13287400
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||||  |||||||  ||||||||||||||| ||||||||| || ||||| ||||||||||| ||||    
T  13287474 cggacactaacacgtcgacacagataataatttgaaaaaatcacataattcagtgtaactacaagtgtcggtgtc 13287400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 377
Target Start/End: Original strand, 41995457 - 41995515
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    |||||| |||| |||||||||||||||||| |||||| ||||||||| |||||||||||    
T  41995457 gacactgacacgccgacacaactaataattcgaaaaaatcacataattcaatgtaatta 41995515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 334 - 391
Target Start/End: Complemental strand, 21576803 - 21576746
Alignment:
Q  334 acacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  21576803 acacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 21576746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 33178018 - 33178083
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||||||||||||||||||| ||||| |||||||||  | ||||||||||||||||| ||||    
T  33178018 acacgccgacacaactaataatttaaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 33178083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 398
Target Start/End: Original strand, 41633728 - 41633800
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 398  Q
    |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||| ||||| |||| ||||||    
T  41633728 acactccgacacagctaataatttgaaaaatttacataattcagtgtaattacaaatgtcggtgtcgtatcgg 41633800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 328 - 402
Target Start/End: Complemental strand, 5894897 - 5894823
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacac 402  Q
    |||| ||||||||||||||||||||||| ||| |||||  ||| ||| ||||||||||| |||| | ||||||||    
T  5894897 acacggacacaactaataatttgaaaaaatcatataatttaatctaactacaagtgtcggtgtcgtgtcggacac 5894823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Original strand, 10290138 - 10290200
Alignment:
Q  1 caacaggtaaaaatattccgtccgttccttcttattgtcgttttaagattatttacacataat 63  Q
    ||||||| ||||||| | ||| |||||||| ||||| ||||||||| ||||||||||||||||    
T  10290138 caacaggcaaaaatagtacgttcgttcctttttattttcgttttaaaattatttacacataat 10290200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 21522734 - 21522808
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||||| |||||||||| ||||| | ||||||| || ||||||||||| ||||| ||||    
T  21522734 cggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21522808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 21533300 - 21533374
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||||| |||||||||| ||||| | ||||||| || ||||||||||| ||||| ||||    
T  21533300 cggacactgacacgccgacacagctaataattttaaaaaataacataattcagtgtaattacaattgtcggtgtc 21533374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 30135306 - 30135372
Alignment:
Q  326 acacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||||||||||||||| ||||| ||||||||  || ||||||||||||||||| ||||    
T  30135306 acacgccgacacaactaataatttgaaaaaaatcacataactcattgtaattacaagtgtcggtgtc 30135372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 330 - 391
Target Start/End: Original strand, 7677702 - 7677763
Alignment:
Q  330 accgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||| |||||||||||||||| ||||||||| || || ||||| |||||||| ||||    
T  7677702 accgacacagctaataatttgaaaaaatcacataattcagtgcaattagaagtgtcggtgtc 7677763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 375
Target Start/End: Complemental strand, 17925258 - 17925189
Alignment:
Q  306 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaat 375  Q
    ||||||||||||||||||| ||| ||||||  || ||||||||| | ||| ||||||||| |||||||||    
T  17925258 gacacggacaccggacactgacataccgacctaaataataatttaagaaaatcacataattcaatgtaat 17925189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 21542028 - 21542088
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||||||||| ||||  | ||||||| || ||||||||||||||||| ||||    
T  21542028 ccgacacaactaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 21542088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 3966474 - 3966561
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||| ||||||| |||  |||||||  |||||||||||| ||| ||||| ||| || |||||||| | |||||| ||||    
T  3966474 cggacacggacactggacactgacatgccgacaccgctaataatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtc 3966561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 4105241 - 4105310
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaa--gtcacataatacaatgtaattacaagtgt 384  Q
    |||| ||| |||| |||||| ||||||||||||||||||   ||||||||| || |||||||||||||||    
T  4105241 cggatactgacacgccgacataactaataatttgaaaaaagatcacataattcagtgtaattacaagtgt 4105310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 332 - 386
Target Start/End: Original strand, 12159951 - 12160005
Alignment:
Q  332 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||||||||||||| |||||  ||||||||  ||||||||||||| |||||    
T  12159951 cgacacaactaataatttaaaaaaaacacataatttaatgtaattacaaatgtcg 12160005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 328 - 366
Target Start/End: Complemental strand, 18316989 - 18316951
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataata 366  Q
    |||||||||||||||||||||| ||||| ||||||||||    
T  18316989 acaccgacacaactaataattttaaaaaatcacataata 18316951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 19579685 - 19579759
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| | || |||||||| |||||||||||| ||| |||||||||  | || |||||||||||||| ||||    
T  19579685 cggacactgatacgccgacacagctaataatttgagaaaatcacataatttagtgcaattacaagtgtcggtgtc 19579759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 320 - 386
Target Start/End: Complemental strand, 24906373 - 24906307
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||| |||| || |||||  ||||||||||||||| | ||||||| || |||||||||||||||||    
T  24906373 acactgacacgccaacacagataataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 24906307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 37328919 - 37328845
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| | ||||||||||| | ||||||||| |||| ||||| ||| || |||||||||| |||||| ||||    
T  37328919 cggacactgatacaccgacacagcaaataatttgtaaaaatcacaaaattcagtgtaattacatgtgtcggtgtc 37328845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 17177098 - 17177029
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| | || || ||||| |||||||||||||||| ||| | ||| || |||||||||||||||||    
T  17177098 cggacactgatacgccaacacagctaataatttgaaaaaatcaaaaaattcattgtaattacaagtgtcg 17177029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 377
Target Start/End: Original strand, 30098301 - 30098370
Alignment:
Q  308 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    ||||||||||||||||| ||||  ||| ||   ||||||||||| ||| ||||||||| |||||||||||    
T  30098301 cacggacaccggacactgacacgacgaaaccgttaataatttgagaaaatcacataattcaatgtaatta 30098370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 6770527 - 6770575
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 365  Q
    |||||||| |||||| ||||||||||||||||| | ||| |||||||||    
T  6770527 cggacactgacacactgacacaactaataatttaagaaaatcacataat 6770575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 365
Target Start/End: Complemental strand, 19552618 - 19552570
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 365  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||    
T  19552618 cggacactgacacgccgacacagttaataatttgaaaaaatcacataat 19552570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 30183547 - 30183607
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||||||||||||||  |||||| || |  | ||||||||||||||| ||||    
T  30183547 ccgacacaactaataatttgaaaatatcacattattcggtttaattacaagtgtcggtgtc 30183607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 340 - 384
Target Start/End: Original strand, 43001807 - 43001851
Alignment:
Q  340 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||||||||||||| | ||||||| || |||||||||||||||    
T  43001807 ctaataatttgaaaaaattacataattcagtgtaattacaagtgt 43001851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 58; Significance: 3e-24; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 298 - 391
Target Start/End: Complemental strand, 7801250 - 7801157
Alignment:
Q  298 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||||||||| |||| |||||||||| ||||||||||||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  7801250 cggatacggacacggataccgaacactaacacgccgacacaactaataatttgaaaaaatcacataattcagcgtaattacaagtgtcggtgtc 7801157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 12696277 - 12696394
Alignment:
Q  284 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    ||||||||||||| ||||  |||||||| |||| ||||||| |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||||||    
T  12696277 atgaagcacggatacggacacggacacg-acac-ggacactgacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtg 12696374  T
Q  384 tcgttgtcctatcggacacg 403  Q
    ||  |||| | |||||||||    
T  12696375 tcagtgtcgtgtcggacacg 12696394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 28715243 - 28715353
Alignment:
Q  284 atgaagcacggatgcggatgcggacacggacaccggacacta-ac--acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 380  Q
    ||||||||||||| ||||| |||||||||||||||||||| | ||  |||| |||||  |||||||||||||||| | ||||||| || |||||||||||    
T  28715243 atgaagcacggatacggatacggacacggacaccggacacgatacggacactgacacggctaataatttgaaaaaatgacataattcagtgtaattacaa 28715342  T
Q  381 gtgtcgttgtc 391  Q
    |||||| ||||    
T  28715343 gtgtcggtgtc 28715353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 320 - 386
Target Start/End: Original strand, 1681745 - 1681811
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||| || |||||||||||||||||    
T  1681745 acactaacacgccgacacaactaataatttgaaaaaatcacgtaattcagtgtaattacaagtgtcg 1681811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 9107445 - 9107371
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||| |||||||| |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  9107445 cggacactaacacgccgacacagctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 9107371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 15489807 - 15489733
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||||  |||||||||||||||||||||||| | ||| ||| |||||||||||||||||||| ||||    
T  15489807 cggacactaacacgtcgacacaactaataatttgaaaaaattacacaattcaatgtaattacaagtgtcggtgtc 15489733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 34595118 - 34595192
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| | |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  34595118 cggacaatgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 34595192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 391
Target Start/End: Complemental strand, 10770748 - 10770675
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||| |||| || |||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  10770748 ggacactgacacgccaacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 10770675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 318 - 391
Target Start/End: Original strand, 16766682 - 16766755
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||| |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  16766682 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 16766755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 284 - 384
Target Start/End: Complemental strand, 8777086 - 8776981
Alignment:
Q  284 atgaagcacggatgcggatgcggaca-cggacac----cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattac 378  Q
    ||||||||||||| ||||  |||||| |||||||    |||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||||    
T  8777086 atgaagcacggatacggacacggacaacggacacgacacggacactgacacgccgacacaactaataatttgaaaaaatcacaaaattcagtgtaattac 8776987  T
Q  379 aagtgt 384  Q
    ||||||    
T  8776986 aagtgt 8776981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 16833294 - 16833361
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||| |||| ||||||||||||||||||||||||| ||||||| | || |||||||||||||||||    
T  16833294 gacactgacacgccgacacaactaataatttgaaaaaatcacatacttcagtgtaattacaagtgtcg 16833361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 426589 - 426515
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  426589 cggacactgacacgccgacacagttaataatttgaaaaaatcacataattaaatgtaattacaagtgtcggtgtc 426515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 8365594 - 8365520
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||||||||||||||||||  ||||||||| |  ||||||||||||||||| ||||    
T  8365594 cggacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgtcggtgtc 8365520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 17302543 - 17302615
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||| | |||||||||||||||||||||||  ||||||||| ||||||||||||||||||| |||||    
T  17302543 acactgacacgctgacacaactaataatttgaaaaaaatcacataattcaatgtaattacaagtgtcattgtc 17302615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 383
Target Start/End: Complemental strand, 17841664 - 17841598
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    |||||||| |||| |||||||| |||||||||||||||| |||||||||  | ||||||||||||||    
T  17841664 cggacactgacacgccgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtg 17841598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 28152083 - 28152156
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  28152083 cggacactgacacgccgacaaagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtc 28152156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 320 - 386
Target Start/End: Original strand, 31959146 - 31959212
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||| |||| ||| |||| |||||||||||||||| ||||||||| || |||||||||||||||||    
T  31959146 acactgacacgccgtcacagctaataatttgaaaaaatcacataatgcagtgtaattacaagtgtcg 31959212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 853925 - 853860
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||||||||||||||||||||||||| |||||||||  | || |||||||||||||| ||||    
T  853925 acacgccgacacaactaataatttgaaaaaatcacataattaagtgcaattacaagtgtcggtgtc 853860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 7977896 - 7977831
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  7977896 acacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 7977831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 336 - 385
Target Start/End: Original strand, 31384923 - 31384972
Alignment:
Q  336 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||||||||||||||| ||||||||| || ||||||||||||||||    
T  31384923 acaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 31384972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 418
Target Start/End: Original strand, 2117069 - 2117160
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgaggagt 418  Q
    |||| |||||||  |||||||||||||||| ||||||||| ||||| ||||| |||||||| |||| | ||||||| | |||||| |||||||    
T  2117069 acactccgacacctctaataatttgaaaaaatcacataattcaatgcaattataagtgtcg-tgtcgtgtcggacatgcctaatcggaggagt 2117160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 331 - 386
Target Start/End: Complemental strand, 1191761 - 1191706
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| |||||||||||||||| ||||| ||| || |||||||||||||||||    
T  1191761 ccgacacagctaataatttgaaaaattcacaaaattcagtgtaattacaagtgtcg 1191706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 4877935 - 4878001
Alignment:
Q  326 acacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||| ||||||||||| |||||||||||||||  | | ||||||||||||||| ||||    
T  4877935 acacaccgacacagctaataatttgaaaaaagtcacataattaagtataattacaagtgtcggtgtc 4878001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 7027206 - 7027300
Alignment:
Q  298 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||||||||||| |||||||||| || |||||||  || |||||||| ||||| ||||||||| || |||||||| | |||||| ||||    
T  7027206 cggatacggacacggacatcggacactaatacgccgacacccctgataatttgaaaaaaatcacataattcagtgtaattatatgtgtcggtgtc 7027300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 392
Target Start/End: Original strand, 7938101 - 7938175
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 392  Q
    ||||||| |||| |||||||| |||||||||||||||| ||| |||||  | |||||||| |||||||| |||||    
T  7938101 ggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattataagtgtcggtgtcc 7938175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 341 - 384
Target Start/End: Complemental strand, 4118384 - 4118341
Alignment:
Q  341 taataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    ||||||||||||||| |||||||||  |||||||||||||||||    
T  4118384 taataatttgaaaaaatcacataattaaatgtaattacaagtgt 4118341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 298 - 377
Target Start/End: Complemental strand, 34225906 - 34225824
Alignment:
Q  298 cggatgcggacacggacaccggacac--taac-acaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    ||||| ||||||||||||| ||||||  |||  |||| ||||||||||||||||||||||| || |||||| || ||||||||    
T  34225906 cggatacggacacggacactggacacgataaggacactgacacaactaataatttgaaaaaatcgcataattcagtgtaatta 34225824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 3398603 - 3398676
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||||| |||||||||||||||| ||| ||||| || |||||||| |||| ||| ||||    
T  3398603 cggacactgacacgccgacacagctaataatttgaaaaa-tcatataattcagtgtaattataagtatcggtgtc 3398676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 7930289 - 7930363
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||  ||||||||| ||||||||||||||| |||||||||  | || |||| ||||||||| ||||    
T  7930289 cggacactgacatgccgacacaattaataatttgaaaaaatcacataatttagtgaaatttcaagtgtcggtgtc 7930363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 340 - 386
Target Start/End: Original strand, 9522898 - 9522944
Alignment:
Q  340 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||||| ||||| ||||||||| || |||||||||||||||||    
T  9522898 ctaataatttaaaaaaatcacataattcagtgtaattacaagtgtcg 9522944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 33001355 - 33001290
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||  |||||||||||||||| |||||||||  |||||||||| | |||||| ||||    
T  33001355 acacgccgacactgctaataatttgaaaaaatcacataattaaatgtaattatatgtgtcggtgtc 33001290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 380
Target Start/End: Complemental strand, 5970168 - 5970120
Alignment:
Q  332 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 380  Q
    |||||||  ||||||||||||||| ||||||||| || |||||||||||    
T  5970168 cgacacagttaataatttgaaaaaatcacataattcagtgtaattacaa 5970120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 377
Target Start/End: Complemental strand, 24115906 - 24115862
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    ||||||||||||||||| ||||| ||||||||| |||| ||||||    
T  24115906 gacacaactaataatttcaaaaaatcacataattcaatataatta 24115862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 30866210 - 30866150
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||||| ||||  |||||||||||| ||| ||||||||| ||||||||||| | ||||||    
T  30866210 acacaccaacaccgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 30866150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 1e-23; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 306 - 398
Target Start/End: Complemental strand, 9408420 - 9408328
Alignment:
Q  306 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 398  Q
    |||||||||||| |||||| |||||||||||||| ||||||||||||||| |||||||||  | ||||||||||||||||| |||| ||||||    
T  9408420 gacacggacaccagacactgacacaccgacacaattaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcgtatcgg 9408328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 320 - 385
Target Start/End: Original strand, 35861951 - 35862016
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||| ||||||||||  |||||||    
T  35861951 acactaacacgccgacacaactaataatttgaaaaaatcacataattcaatgtaattgtaagtgtc 35862016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 327 - 391
Target Start/End: Original strand, 3991318 - 3991382
Alignment:
Q  327 cacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||||||||||||||||||| ||||||||| || | ||||||||||||||| ||||    
T  3991318 cacaccgacacaactaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc 3991382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 11061151 - 11061077
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||||||  | | ||||||||||||||| ||||    
T  11061151 cggacactgacacaccgacacagctaataatttgaaaaaatcacataatttagtataattacaagtgtcggtgtc 11061077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 18215261 - 18215187
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||| ||||| || |||||||||||||||| ||||||||| || |||| |||||||||||| ||||    
T  18215261 cggacactaacacgccgacgcagctaataatttgaaaaaatcacataatgcagtgtagttacaagtgtcggtgtc 18215187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 284 - 386
Target Start/End: Original strand, 24105631 - 24105731
Alignment:
Q  284 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    ||||||||||||| ||||| |||||||| |||| ||||||| |||| |||||||| |||||||||||||||| |  ||| || || ||||||||||||||    
T  24105631 atgaagcacggatacggatacggacacg-acac-ggacactgacacgccgacacagctaataatttgaaaaaattgcatgattcagtgtaattacaagtg 24105728  T
Q  384 tcg 386  Q
    |||    
T  24105729 tcg 24105731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 402
Target Start/End: Original strand, 13770675 - 13770760
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacac 402  Q
    |||||||| | || |||||||| |||||||||| ||||| | ||||||| || |||||||||||||||||||||| | ||||||||    
T  13770675 cggacactgatacgccgacacagctaataatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcggacac 13770760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 24339635 - 24339700
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  24339635 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24339700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 7438704 - 7438764
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||  ||||||||||||||| ||||||||| |||||||||||||||||||| ||||    
T  7438704 ccgacacagttaataatttgaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 7438764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 298 - 402
Target Start/End: Original strand, 9778462 - 9778569
Alignment:
Q  298 cggatgcggacacggacaccggacacta-ac--acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtccta 394  Q
    ||||| |||||||||||||||||||| | ||  |||| |||||| || ||||||||||||| ||||||||| || | ||||||||||||||| |||| |     
T  9778462 cggatacggacacggacaccggacacgacacggacactgacacagctgataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtg 9778561  T
Q  395 tcggacac 402  Q
    ||||||||    
T  9778562 tcggacac 9778569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 25481895 - 25481953
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  25481895 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 25481953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 27945025 - 27945099
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||| ||||||||||||| ||| | ||||||| || ||||||||||||||||| ||||    
T  27945025 cggacactgacacgccgacaccactaataatttgagaaaattacataattcagtgtaattacaagtgtcggtgtc 27945099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 403
Target Start/End: Complemental strand, 5409910 - 5409825
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 403  Q
    ||||||| |||| | || ||| |||||||||||||||| ||||||||| || || |||||||||||||| |||| | |||||||||    
T  5409910 ggacactgacacgctgatacagctaataatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacg 5409825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 8234139 - 8234196
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    |||||||||||||||||||||||||||||| | ||||||| || |||| |||||||||    
T  8234139 acacaccgacacaactaataatttgaaaaaataacataattcagtgtagttacaagtg 8234196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 320 - 403
Target Start/End: Complemental strand, 32094093 - 32094009
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 403  Q
    |||||||||  || ||||||||||||||||||||||  ||||||||| || ||||||||||| ||||| |||| | |||||||||    
T  32094093 acactaacatgccaacacaactaataatttgaaaaaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacg 32094009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 43027576 - 43027470
Alignment:
Q  284 atgaagcacggatgcggatgc-ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 382  Q
    ||||||||||||||||||  | |||||| |||| |||||||| ||||  |||| || |||||||||||||||| ||||||||| || ||||| |||||||    
T  43027576 atgaagcacggatgcggacactggacac-gaca-cggacactgacacggcgacccagctaataatttgaaaaaatcacataatgcagtgtaaatacaagt 43027479  T
Q  383 gtcgttgtc 391  Q
    |||| ||||    
T  43027478 gtcggtgtc 43027470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 391
Target Start/End: Complemental strand, 11665528 - 11665441
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||| ||| | | |||| | ||||||||||||||||||||||| ||||||||| || | |||||| |||||||| ||||    
T  11665528 cggatacggacactggatattgacacgctgacacaactaataatttgaaaaaatcacataattcagtctaattataagtgtcgatgtc 11665441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 33994199 - 33994270
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||| ||||| |||||| ||||||||||| |||||||||| || || |||||||||||||| ||||    
T  33994199 acactgacacgccgacgcaactactaatttgaaaaggtcacataattcagtgcaattacaagtgtcggtgtc 33994270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 11831404 - 11831481
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 382  Q
    |||| |||||||| |||||| | |||| |||||||||||||||||||||||| ||| |||||  | |||||||||||||    
T  11831404 cggatacggacactggacacga-cacatcgacacaactaataatttgaaaaaatcatataatttagtgtaattacaagt 11831481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 386
Target Start/End: Complemental strand, 26033513 - 26033467
Alignment:
Q  340 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||    
T  26033513 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26033467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 7197363 - 7197298
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||| |||||||||| ||||| |||  |||| |||||||||||||||||||| ||||    
T  7197363 acacgccgacacagctaataatttaaaaaaatcatttaattcaatgtaattacaagtgtcggtgtc 7197298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 6630985 - 6630913
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||| ||||||| ||||||||||||| |||||||| |||| || |||||||| | |||||| ||||    
T  6630985 gacactgacacgccgacaccactaataatttgagaaagtcacttaattcagtgtaattatatgtgtcgatgtc 6630913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 398
Target Start/End: Original strand, 25822648 - 25822720
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 398  Q
    |||| |||||||||||||||||||||||||    || ||| || ||||||||||||||||| |||| ||||||    
T  25822648 acacgccgacacaactaataatttgaaaaaaaatcacaattcagtgtaattacaagtgtcggtgtcgtatcgg 25822720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 11272649 - 11272587
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcac--ataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||| ||||||||||||| ||||  ||||| || ||||||||||||||||| ||||    
T  11272649 ccgacacaactgataatttgaaaaaatcacatataattcagtgtaattacaagtgtcggtgtc 11272587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 365
Target Start/End: Complemental strand, 29763247 - 29763201
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataat 365  Q
    |||||| ||||||| |||||||| ||||||||||||| |||||||||    
T  29763247 gacactgacacaccaacacaacttataatttgaaaaaatcacataat 29763201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 43249977 - 43250047
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 387  Q
    |||||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  43249977 cggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 43250047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 169 - 219
Target Start/End: Complemental strand, 48522928 - 48522878
Alignment:
Q  169 gacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaata 219  Q
    |||||||||||| |||||||||||||||| ||||||||  | |||||||||    
T  48522928 gacaaaataataattaatgttgcattaaactttaaaaatgataaataaata 48522878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 21826259 - 21826304
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataa 364  Q
    ||||||||||| ||||||| ||||||||||| ||||| ||||||||    
T  21826259 gacactaacacgccgacacgactaataatttaaaaaaatcacataa 21826304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 7058429 - 7058477
Alignment:
Q  336 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||||||||||||||||| |||  |||| || |||||||||||||||    
T  7058429 acaactaataatttgaaaaaatcatgtaattcagtgtaattacaagtgt 7058477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 10042921 - 10042969
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 365  Q
    |||||||| |||| ||||||| ||||||||||||| ||| |||||||||    
T  10042921 cggacacttacacgccgacaccactaataatttgataaattcacataat 10042969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 398
Target Start/End: Original strand, 21560484 - 21560568
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaa-----aaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 398  Q
    |||||| |||| |||| ||| |||||||||||||     ||| ||||||||| || ||||||||||||||||| |||| ||||||    
T  21560484 gacactgacacgccgatacagctaataatttgaagaaaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtatcgg 21560568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 377
Target Start/End: Complemental strand, 29787444 - 29787384
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    |||||| |||||| |||||||  |||||||||||| ||| ||||||||| || ||||||||    
T  29787444 cggacattaacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaatta 29787384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 40287422 - 40287363
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||| |||||||||| |||||||||||||| ||| || || || |||||||||||||||||    
T  40287422 acacgccgacacaacgaataatttgaaaaaatcatat-attcagtgtaattacaagtgtcg 40287363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 167 - 219
Target Start/End: Original strand, 46392597 - 46392649
Alignment:
Q  167 ttgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaata 219  Q
    ||||||||||  |||||||||||||||| || ||| ||||| |||||||||||    
T  46392597 ttgacaaaatcctagttaatgttgcattgaactttgaaaacgacaaataaata 46392649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 347 - 391
Target Start/End: Original strand, 48438560 - 48438604
Alignment:
Q  347 tttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||| ||||||||| ||||||||||||| |||||| ||||    
T  48438560 tttgaaaaaatcacataattcaatgtaattacacgtgtcggtgtc 48438604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 4e-23; HSPs: 49)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 311 - 385
Target Start/End: Complemental strand, 32434798 - 32434723
Alignment:
Q  311 ggacaccggacactaacac-accgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||||||||| |||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  32434798 ggacaccggacactgacaccaccgacacaactaataatttgaaaaagtcacataattcattgtaattacaagtgtc 32434723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 7e-19
Query Start/End: Original strand, 284 - 391
Target Start/End: Complemental strand, 38078769 - 38078662
Alignment:
Q  284 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 382  Q
    ||||||||||||| ||||  ||||||| |||||| | ||||| ||||  ||||||| |||||||||||||||| ||||||||| ||||||||||||||||    
T  38078769 atgaagcacggatacggacacggacaccggacac-gaacactgacacgtcgacacagctaataatttgaaaaaatcacataattcaatgtaattacaagt 38078671  T
Q  383 gtcgttgtc 391  Q
    |||| ||||    
T  38078670 gtcggtgtc 38078662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 37598803 - 37598889
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||| |||||||| ||||    
T  37598803 cggacacagacaccggacactgacacgccgacacaactaataatttgaaaaaatcaca-aattcagtgtaattataagtgtcggtgtc 37598889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 22881689 - 22881617
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||| ||||||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  22881689 gacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22881617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 308 - 391
Target Start/End: Complemental strand, 31672979 - 31672896
Alignment:
Q  308 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| || ||||||| ||||||||||||| |||||||||||||||| |||| |||| || ||||||||||||| ||| ||||    
T  31672979 cacggatacgggacactgacacaccgacacagctaataatttgaaaaaatcacttaattcagtgtaattacaagtctcggtgtc 31672896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 328 - 391
Target Start/End: Complemental strand, 40258997 - 40258934
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||| ||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  40258997 acaccgacacaattaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 40258934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 1705067 - 1704993
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||  ||||||||||||| |||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  1705067 cggacaccgacacaccgacacatctaataatttgaaaaaatcacataattcagggtaattacaagtgtcggtgtc 1704993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 24577245 - 24577187
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  24577245 gacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 24577187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 333 - 397
Target Start/End: Complemental strand, 28273147 - 28273083
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg 397  Q
    |||||||||||| |||||||||| ||| ||||| || ||||||||||||||||| ||||||||||    
T  28273147 gacacaactaatcatttgaaaaaatcatataattcagtgtaattacaagtgtcggtgtcctatcg 28273083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 317 - 392
Target Start/End: Original strand, 1815241 - 1815316
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 392  Q
    |||||||| |||| ||||||||| |||| |||| ||||| ||||||||| || ||||||||||||||||| |||||    
T  1815241 cggacactgacacgccgacacaaataattattttaaaaaatcacataattcagtgtaattacaagtgtcggtgtcc 1815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 304 - 391
Target Start/End: Complemental strand, 46348470 - 46348384
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||| ||||||| |||| |||||||| |||||||||||||||| ||| |||||  | ||||||||||||||||| ||||    
T  46348470 cggatacggacac-ggacactgacacgccgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 46348384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 384
Target Start/End: Original strand, 113292 - 113350
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  113292 acacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 113350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 403
Target Start/End: Complemental strand, 1486768 - 1486698
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 403  Q
    |||||| |||||||||||||||| ||||||||| || |||||||| |||||||| |||| | |||||||||    
T  1486768 gacacagctaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacg 1486698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 382
Target Start/End: Complemental strand, 18556543 - 18556466
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 382  Q
    |||| |||||||| ||||||| |||| |||||||| |||||||||||||||  |||||||||  |||||||||||||||    
T  18556543 cggatacggacac-ggacactgacacgccgacacagctaataatttgaaaatatcacataatttaatgtaattacaagt 18556466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 32461529 - 32461471
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||| ||| ||||||||||||||||||||| |||||||||  |||||||||||||||||    
T  32461529 acacgccggcacaactaataatttgaaaaaatcacataatttaatgtaattacaagtgt 32461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 42359524 - 42359450
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| | |||||| |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  42359524 cggacactgacacgctgacacatctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 42359450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 377
Target Start/End: Complemental strand, 398878 - 398780
Alignment:
Q  284 atgaagcacggatgcggatgcggacac-ggacac----cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    ||||||||||||| |||| |||||||| ||||||    |||||||| |||| |||||||  |||||||||||||||| ||||||||| || ||||||||    
T  398878 atgaagcacggatacggacgcggacaccggacacgacacggacactgacacgccgacaccgctaataatttgaaaaaatcacataattcagtgtaatta 398780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 391
Target Start/End: Complemental strand, 24334799 - 24334706
Alignment:
Q  299 ggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtca-cataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||||||||||||||||||||  ||||||||||||| ||||| ||||||||||     |||||| || ||||||||||||||||| ||||    
T  24334799 ggatacggacacggacaccggacacggacacaccgacacagctaatcatttgaaaaaaaatgcataattcagtgtaattacaagtgtcggtgtc 24334706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 21378571 - 21378631
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||||||||||| ||||||| |||||||| | ||||||| || |||||||||||||||||    
T  21378571 acacaccgacacagctaataaattgaaaaaattacataattcagtgtaattacaagtgtcg 21378631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 47989484 - 47989555
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||| ||||||||| ||||||||| ||||| ||||||||| || ||||||||||||||||| ||||    
T  47989484 gacactgacacgccgacacaa-taataatttaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 47989555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 6332666 - 6332728
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||||||||||||||||||||||| ||||||||| || ||||||||||||| ||| ||||    
T  6332666 acacggacacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtatcggtgtc 6332728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 18190167 - 18190109
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  18190167 gacacacctaataatttgaaaaaattacataattcagtgtaattacaagtgtcgatgtc 18190109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 22515946 - 22515888
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  22515946 gacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 22515888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 342 - 391
Target Start/End: Original strand, 18337338 - 18337387
Alignment:
Q  342 aataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  18337338 aataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 18337387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 398
Target Start/End: Original strand, 38503304 - 38503385
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 398  Q
    |||||||||||||||||||||  |||||||||||| ||| ||| ||| | || |||||||| | |||||| |||||| ||||    
T  38503304 cggacactaacacaccgacaccgctaataatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcgg 38503385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 48450662 - 48450593
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| |||| || ||||| |||||||||||||||| | |||||||  | |||||||||||||||||    
T  48450662 cggacactgacacgccaacacagctaataatttgaaaaaataacataatttagtgtaattacaagtgtcg 48450593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 51410022 - 51410083
Alignment:
Q  331 ccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| ||||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  51410022 ccgacacatctaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 51410083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 334 - 386
Target Start/End: Original strand, 31015044 - 31015096
Alignment:
Q  334 acacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||| |||||||||||| ||| ||||||||| || |||||||||||||||||    
T  31015044 acacagctaataatttgagaaaatcacataattcagtgtaattacaagtgtcg 31015096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 34298420 - 34298480
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    |||| ||| |||||||||||| ||||||||||||| ||| ||||||||| || ||||||||    
T  34298420 cggaaactgacacaccgacaccactaataatttgagaaaatcacataattcagtgtaatta 34298480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 385
Target Start/End: Original strand, 6427459 - 6427516
Alignment:
Q  331 ccgacacaactaataatttg---aaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    ||||||||||||||||||||   ||||| ||||||||| |||||||| ||||||||||    
T  6427459 ccgacacaactaataatttgaaaaaaaaatcacataattcaatgtaactacaagtgtc 6427516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 14359587 - 14359529
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||| |||||||| |||||||||||||||| |||||||||  | ||||||||||||||||    
T  14359587 acacgccgacacagctaataatttgaaaaa-tcacataatttagtgtaattacaagtgtc 14359529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 30359374 - 30359441
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||| |||||||| ||||||| ||||||||||||| |||||||||  | ||||| | |||||||||    
T  30359374 gacactgacacaccggcacaactgataatttgaaaaaatcacataatttagtgtaactgcaagtgtcg 30359441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 168 - 219
Target Start/End: Complemental strand, 36033611 - 36033560
Alignment:
Q  168 tgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaata 219  Q
    ||||||||||||||||||| ||| |||||| || |||||||| |||||||||    
T  36033611 tgacaaaataatagttaatattgaattaaatttaaaaaacaataaataaata 36033560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 377
Target Start/End: Complemental strand, 2288240 - 2288182
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    ||||||||||||||||||  | ||||||||| | ||| ||||||||| |||||||||||    
T  2288240 gacactaacacaccgacaacaataataatttaagaaaatcacataattcaatgtaatta 2288182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 5376575 - 5376501
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||| |||||||  |||||||||| | ||| | ||||||| || |||||||| |||||||| ||||    
T  5376575 cggacactaacacgccgacaccgctaataatttaagaaaataacataattcagtgtaattaaaagtgtcggtgtc 5376501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 341 - 391
Target Start/End: Complemental strand, 6612222 - 6612172
Alignment:
Q  341 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  6612222 taataatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtc 6612172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 387
Target Start/End: Complemental strand, 3490497 - 3490395
Alignment:
Q  284 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 382  Q
    ||||||||||||| ||||| | ||||| ||||||  |||||| |||| |||||||  |||||||||||| |||   |||| || || |||||||||||||    
T  3490497 atgaagcacggatacggatacagacaccggacac--gacactgacacgccgacactgctaataatttgagaaaactacattattcagtgtaattacaagt 3490400  T
Q  383 gtcgt 387  Q
    |||||    
T  3490399 gtcgt 3490395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 5927392 - 5927347
Alignment:
Q  340 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||||||||||| ||| |||||  ||||||||||||||||||    
T  5927392 ctaataatttgaaaaaatcatataatttaatgtaattacaagtgtc 5927347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 376
Target Start/End: Original strand, 9828019 - 9828087
Alignment:
Q  307 acacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatt 376  Q
    |||| |||||||||||| | ||| ||||||| ||||||||||||| ||| ||||||||| || |||||||    
T  9828019 acacagacaccggacacga-cacgccgacaccactaataatttgataaaatcacataattcagtgtaatt 9828087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 16119140 - 16119091
Alignment:
Q  50 tatttacacataataagaaaactagtaaatttcgttacttttgatgaaat 99  Q
    ||||||||||||| |||||||  | ||||||| |||||||||||||||||    
T  16119140 tatttacacataacaagaaaaacattaaattttgttacttttgatgaaat 16119091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 19058922 - 19058857
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||| |||||||||| ||||  | ||||||| || ||||||||||||||||| ||||    
T  19058922 acacgccgacacagctaataatttaaaaagataacataattcagtgtaattacaagtgtcggtgtc 19058857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 49 - 138
Target Start/End: Complemental strand, 21623767 - 21623678
Alignment:
Q  49 ttatttacacataataagaaaactagtaaatttcgttacttttgatgaaatcatttctttttctattatacccttaactttttattatct 138  Q
    ||||||||||| |  ||||||||   ||||||| ||||||||||||||||   | ||||||||| | |||||||||| | ||||||||||    
T  21623767 ttatttacacaaaccaagaaaaccgataaattttgttacttttgatgaaagtgtgtctttttctttaatacccttaaatatttattatct 21623678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 403
Target Start/End: Complemental strand, 35919370 - 35919265
Alignment:
Q  304 cggacacggacac-cggacactaacacaccgacacaactaataatttg-----aaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcg 397  Q
    ||||||| ||||| ||||||| ||||| |||||||| |||||||||||     ||||| ||||||||| || |||||||| |||||||  |||| | |||    
T  35919370 cggacactgacacacggacaccaacactccgacacatctaataatttgaagaaaaaaaatcacataattcagtgtaattataagtgtccgtgtcgtgtcg 35919271  T
Q  398 gacacg 403  Q
    ||||||    
T  35919270 gacacg 35919265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 36878427 - 36878519
Alignment:
Q  298 cggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| ||||||||||||  | ||||| |||| |||||||  |||||||||||| ||| ||||||||| || |||||||| | |||||| ||||    
T  36878427 cggatacggacacggacatag-acactgacacgccgacaccgctaataatttgagaaaatcacataattcagtgtaattataggtgtcggtgtc 36878519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 336 - 384
Target Start/End: Original strand, 2283669 - 2283717
Alignment:
Q  336 acaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||| ||||||||||||| |||||| || ||||||||||| ||||||    
T  2283669 acaacttataatttgaaaaaatcacatgattcaatgtaattataagtgt 2283717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 6427334 - 6427394
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    |||||||| |||| || ||||  |||||||||||| ||| ||||||||| |||||||||||    
T  6427334 cggacactgacacgccaacaccgctaataatttgagaaaatcacataattcaatgtaatta 6427394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 9103624 - 9103672
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 365  Q
    |||||||| |||| ||||||||  ||||||||||||||| |||||||||    
T  9103624 cggacactgacacgccgacacagttaataatttgaaaaaatcacataat 9103672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 365
Target Start/End: Original strand, 16812527 - 16812575
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataat 365  Q
    |||||||| |||||||||||| | ||||||||||| ||| |||||||||    
T  16812527 cggacactgacacaccgacaccaataataatttgacaaaatcacataat 16812575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 333 - 391
Target Start/End: Original strand, 17778549 - 17778604
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||||||||||||||| ||||   ||||| ||||||||||||||||| ||||    
T  17778549 gacacagctaataatttgaaaaaatcac---atacagtgtaattacaagtgtcggtgtc 17778604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 51; Significance: 4e-20; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 306 - 392
Target Start/End: Complemental strand, 17835 - 17749
Alignment:
Q  306 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcc 392  Q
    |||||||||| |||||| |||||| | ||||||||||||||||||||||| |||||||||  | ||||||||||||||||| |||||    
T  17835 gacacggacatcggacaataacacgctgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtcc 17749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 51; Significance: 4e-20; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 284 - 385
Target Start/End: Complemental strand, 21374807 - 21374706
Alignment:
Q  284 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 382  Q
    ||||||||||||| ||||  ||||||| |||||| |||||||||||| |||||||| |||||||||||||||| | ||||||| || |||||||||||||    
T  21374807 atgaagcacggatacggacacggacaccggacac-ggacactaacacgccgacacagctaataatttgaaaaaattacataattcagtgtaattacaagt 21374709  T
Q  383 gtc 385  Q
    |||    
T  21374708 gtc 21374706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 37558949 - 37559035
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||| ||||||| |||| |||||||| ||||||||||| |||| ||||||||| |||||||||||||||||||| ||||    
T  37558949 cggatacggacac-ggacactgacacgccgacacagctaataatttgtaaaaatcacataattcaatgtaattacaagtgtcggtgtc 37559035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 15657848 - 15657922
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||| ||||| |||||||||||||| |||| ||||||||| || ||||||||||| ||||| ||||    
T  15657848 cggacactaacacgccgactcaactaataatttgtaaaaatcacataattcagtgtaattacaaatgtcggtgtc 15657922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 418
Target Start/End: Complemental strand, 19536473 - 19536376
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttga-aaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagg 415  Q
    |||||| | |||| ||||||||||||||||||||| |||| ||||||||| || ||||||||||||||||| ||     ||||||||| |||||||||||    
T  19536473 cggacaatgacacgccgacacaactaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtg-----tcggacacgcctaatccgagg 19536379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 30717605 - 30717531
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| ||| ||||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  30717605 cggacactgacaaaccgacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcgatgtc 30717531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 15972857 - 15972931
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||| ||||||||||||||| | ||| ||| || ||||||||||||||||| ||||    
T  15972857 cggacactgacacgccgacacaattaataatttgaaaaaattacacaattcagtgtaattacaagtgtcggtgtc 15972931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 34 - 104
Target Start/End: Complemental strand, 16022034 - 16021964
Alignment:
Q  34 attgtcgttttaagattatttacacataataagaaaactagtaaatttcgttacttttgatgaaatcattt 104  Q
    |||||||||||||||||||||||||||| | ||||||| | ||||||| ||||||||| ||| ||| ||||    
T  16022034 attgtcgttttaagattatttacacatactgagaaaaccaataaattttgttactttttatggaattattt 16021964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 18421947 - 18422021
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||| ||||||||| ||||  ||||||||| || ||||||||||||||||| ||||    
T  18421947 cggacactgacacgccgacacaattaataatttaaaaatatcacataattcagtgtaattacaagtgtcggtgtc 18422021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 30335401 - 30335475
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||| ||| ||||||||||||||||||||||||| | |||||||  | ||||||||||| ||||| ||||    
T  30335401 cggacactagcacgccgacacaactaataatttgaaaaaatgacataatttagtgtaattacaaatgtcggtgtc 30335475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 6940239 - 6940308
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| |||| |||||||| |||||||||| ||||||| |||||||  | |||||||||||||||||    
T  6940239 cggacactgacacgccgacacagctaataattttaaaaagttacataattaagtgtaattacaagtgtcg 6940308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 391
Target Start/End: Complemental strand, 18841087 - 18841014
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||| |||| | ||||||||||||||||||||||| | |||||||  | ||||||||||||||||| ||||    
T  18841087 ggacactgacacgctgacacaactaataatttgaaaaaattacataattaagtgtaattacaagtgtcggtgtc 18841014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 23718010 - 23718079
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||||||| || |||||||| | ||||||    
T  23718010 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 23718079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Original strand, 24105682 - 24105751
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| ||||||||||||  |||||||||||| ||||||||||||| || |||||||| | ||||||    
T  24105682 cggacactgacacaccgacaccgctaataatttgagaaagtcacataattcagtgtaattatatgtgtcg 24105751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 30404925 - 30404856
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| |||| |||||||   ||||||||||||||| ||||||||| || |||||||||||||||||    
T  30404925 cggacactgacacgccgacacggttaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 30404856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 20473320 - 20473380
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||||||||| ||||| ||| ||||| || ||||||||||||||||| ||||    
T  20473320 ccgacacaactaataatttaaaaaactcatataattcagtgtaattacaagtgtcgatgtc 20473380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 391
Target Start/End: Original strand, 974746 - 974805
Alignment:
Q  332 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||||||||||||||  |||||| || || ||||||||||||||||| ||||    
T  974746 cgacacaactaataatttgaaaagatcacattattcagtgtaattacaagtgtcggtgtc 974805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 383
Target Start/End: Original strand, 37419714 - 37419793
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    |||| |||||||||||||||| |||| ||||||   | |||||||||||||| ||||| ||| || ||||||||||||||    
T  37419714 cggatacggacaccggacactgacacgccgacatggcaaataatttgaaaaaatcacaaaattcagtgtaattacaagtg 37419793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 2438778 - 2438720
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||||||||| ||||| ||||||||| || ||||||||||||||||| ||||    
T  2438778 gacacagctaataatttcaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 2438720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 20539749 - 20539675
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| ||||  ||||||| |||||||||||||||| ||| |||||  | ||||||||||||||||| ||||    
T  20539749 cggacactgacacgtcgacacagctaataatttgaaaaaatcatataatttagtgtaattacaagtgtcggtgtc 20539675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 26769471 - 26769569
Alignment:
Q  298 cggatgcggacacggacaccggacacta-----acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||||||||||||||||||| |     |||| ||||||||||||||||||||||||  |||||| ||    ||||||||||||||||| ||||    
T  26769471 cggatacggacacggacaccggacacgacacagacacgccgacacaactaataatttgaaaatatcacattatctggtgtaattacaagtgtcggtgtc 26769569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 12668489 - 12668424
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||| |||||||||||||||||| | ||||||| || |||||||| |||||||| ||||    
T  12668489 acacgccgacataactaataatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtc 12668424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 12940994 - 12940941
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||||||||||||||||||||| ||| ||||| || ||||||||||| |||||    
T  12940994 gacacaactaataatttgaaaaaatcatataattcagtgtaattacaaatgtcg 12940941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 38117232 - 38117167
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||| | |  |||||||||||||||    
T  38117232 gacactgacacgccgacacagctaataatttgaaaaaatcacatacttcggtgtaattacaagtgt 38117167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 36756417 - 36756345
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| ||||  ||||||||||||||||||||| || | ||||||| || |||||||| |||||||| ||||    
T  36756417 gacactgacacgtcgacacaactaataatttgaagaaataacataattcagtgtaattataagtgtcggtgtc 36756345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 5040730 - 5040792
Alignment:
Q  331 ccgacacaactaataatttgaaaaag--tcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||| ||||||||||||||||   ||||||||| |||||||||||||||||||| ||||    
T  5040730 ccgatacagctaataatttgaaaaaaaatcacataattcaatgtaattacaagtgtcggtgtc 5040792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 76 - 158
Target Start/End: Complemental strand, 14117814 - 14117731
Alignment:
Q  76 aaatttcgttacttttgatgaaatcatttcttttt-ctattatacccttaactttttattatcttgttctatctacttatctct 158  Q
    |||||| ||||||||||||||||| || ||||||| |||| |||| ||||| | ||||||||||| ||  ||||| ||||||||    
T  14117814 aaattttgttacttttgatgaaattatgtctttttcctataatactcttaagtatttattatcttatttcatctatttatctct 14117731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 402
Target Start/End: Complemental strand, 14996330 - 14996213
Alignment:
Q  284 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttga-aaaagtcacataatacaatgtaattacaagt 382  Q
    ||||||||||||| |||| || |||| | |||| ||||||| |||  |||||||| |||||||||||| |||| ||| |||||  | |||||||||||||    
T  14996330 atgaagcacggatacggacgcagacatg-acac-ggacactgacaagccgacacagctaataatttgaaaaaaatcatataatttagtgtaattacaagt 14996233  T
Q  383 gtcgttgtcctatcggacac 402  Q
    |||| |||| | ||||||||    
T  14996232 gtcggtgtcttgtcggacac 14996213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 23058518 - 23058443
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| | |||| || |||||| |||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  23058518 cggacagtgacacgcccacacaattaataatttgaaaaaaatcacataatccagtgtaattacaagtgtcggtgtc 23058443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 11223922 - 11223864
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||||| ||||||||| | ||||||| || ||||||||||||||||| ||||    
T  11223922 gacacagctaatattttgaaaaaataacataattcagtgtaattacaagtgtcggtgtc 11223864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 384
Target Start/End: Complemental strand, 29176566 - 29176501
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||| |||| | ||||||  |||||||||||||| |||||||||| || |||||||| ||||||    
T  29176566 gacacttacacgcagacacagttaataatttgaaaaggtcacataattcagtgtaattataagtgt 29176501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 21091707 - 21091775
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||| ||||||||||||  |||||||||| | ||| | ||||| | || ||||||||||||||||    
T  21091707 cggacactgacacaccgacaccgctaataatttaagaaaataacatacttcagtgtaattacaagtgtc 21091775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 217
Target Start/End: Original strand, 33599016 - 33599068
Alignment:
Q  165 tattgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaa 217  Q
    ||||||||||||||  ||||||||||||||||| ||| |||| || |||||||    
T  33599016 tattgacaaaataacggttaatgttgcattaaactttgaaaataataaataaa 33599068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 47; Significance: 1e-17; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 22651960 - 22652034
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||||||| |||| ||||||||||||||| ||||    
T  22651960 cggacactgacacgccgacacagctaataatttgaaaaaatcacataattcaatataattacaagtgtcggtgtc 22652034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 304 - 384
Target Start/End: Complemental strand, 36450841 - 36450762
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||| |||||||| ||||||| |||| ||||||||||||||||||||||||| ||||| ||| || |||||||||||||||    
T  36450841 cggatacggacac-ggacactgacacgccgacacaactaataatttgaaaaaatcacagaattcagtgtaattacaagtgt 36450762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 312 - 383
Target Start/End: Complemental strand, 30271371 - 30271300
Alignment:
Q  312 gacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    ||||||||||||| |||| |||||||| ||||| |||||||||| ||||||||| || ||||||||||||||    
T  30271371 gacaccggacactgacacgccgacacagctaatcatttgaaaaaatcacataatgcagtgtaattacaagtg 30271300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 15816204 - 15816130
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||||||||||||||||||| |||||||||  | |||||||| |||||||| ||||    
T  15816204 cggacactgacacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattataagtgtcggtgtc 15816130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 322 - 391
Target Start/End: Complemental strand, 4298956 - 4298887
Alignment:
Q  322 actaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| ||||||||  ||||||||||||||| |||||||||  ||||||||||||||||||| ||||    
T  4298956 actaacacgccgacacagttaataatttgaaaaaatcacataatttaatgtaattacaagtgtcggtgtc 4298887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 25566789 - 25566899
Alignment:
Q  284 atgaagcacggatgcggatgcggacacggacaccggacacta---acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 380  Q
    ||||||||||||| |||||   ||||| |||||||||||  |   | |||| |||||| |||||||||||||||| ||||||||| || |||||||||||    
T  25566789 atgaagcacggatacggatatagacacagacaccggacatgacacagacactgacacagctaataatttgaaaaaatcacataattcagtgtaattacaa 25566888  T
Q  381 gtgtcgttgtc 391  Q
    |||||| ||||    
T  25566889 gtgtcggtgtc 25566899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 391
Target Start/End: Complemental strand, 29447170 - 29447111
Alignment:
Q  332 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||    
T  29447170 cgacacaactaataatttgagaaaatcacataattcaatgtaactacaagtgtcggtgtc 29447111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 18170557 - 18170483
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| ||||| ||||    
T  18170557 cggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18170483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 18634125 - 18634051
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||| ||| ||||||||||| | ||||||| |||||||||||||| ||||| ||||    
T  18634125 cggacactgacacgccgacacaattaaaaatttgaaaaaattacataattcaatgtaattacaaatgtcggtgtc 18634051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 22197815 - 22197749
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    ||||||||||| || ||||| |||||||||||||||| |||||||||  | ||||||||||||||||    
T  22197815 gacactaacacgccaacacagctaataatttgaaaaattcacataatttagtgtaattacaagtgtc 22197749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 24613509 - 24613578
Alignment:
Q  321 cactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||||||||||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  24613509 cactgacacaccgacacagctaataatttgaaaaa-tcacataattaagtgtaattacaagtgtcggtgtc 24613578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 338 - 391
Target Start/End: Original strand, 4948657 - 4948710
Alignment:
Q  338 aactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  4948657 aactaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 4948710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 391
Target Start/End: Complemental strand, 13437038 - 13436965
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||| |||| |||||||| |||||||||||||||| ||||||||| ||  ||||| |||||||||| ||||    
T  13437038 ggacactgacacgccgacacagctaataatttgaaaaaatcacataattcatggtaataacaagtgtcggtgtc 13436965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 25192422 - 25192353
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| |||| |||||||| |||||||||||||||||| ||||||| || | |||||| ||||||||    
T  25192422 cggacactgacacgccgacacagctaataatttgaaaaagtgacataattcagtataattataagtgtcg 25192353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 317 - 386
Target Start/End: Complemental strand, 29510379 - 29510310
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||| ||| || | |||||||||||||||    
T  29510379 cggacactgacacgccgacacagctaataatttgaaaaaatcacaaaattcagtataattacaagtgtcg 29510310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 332 - 391
Target Start/End: Complemental strand, 2572116 - 2572057
Alignment:
Q  332 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  2572116 cgacacacctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 2572057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 8342967 - 8343030
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||| | |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  8342967 acaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 8343030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 8343309 - 8343368
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    ||||||||||| | |||||||||||||||| |||||||||  | ||||||||||||||||    
T  8343309 acacaccgacatagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 8343368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 5813576 - 5813650
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||  |||| |||||||| |||||||||||||||||||||||| |  | ||||| ||||||||||| ||||    
T  5813576 cggacacggacacgccgacacagctaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 5813650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 20873053 - 20873127
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||| |  ||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  20873053 cggacactgacacgccgacatagataataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 20873127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 309 - 384
Target Start/End: Original strand, 21465391 - 21465463
Alignment:
Q  309 acggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    ||||||||||||||| |   ||| |||||| |||||||||||||||| ||| ||||| | ||||||||||||||||    
T  21465391 acggacaccggacacga---cacggacacagctaataatttgaaaaaatcatataattcgatgtaattacaagtgt 21465463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 384
Target Start/End: Original strand, 22595981 - 22596045
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    ||||| |||| |||||||| |||||||||| ||||| | ||||||| || |||||||||||||||    
T  22595981 acactgacacgccgacacagctaataatttaaaaaaataacataattcagtgtaattacaagtgt 22596045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 387
Target Start/End: Complemental strand, 41832001 - 41831945
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 387  Q
    ||||||||  ||||||||||||||| ||||||||| || ||||| ||||||||||||    
T  41832001 ccgacacagttaataatttgaaaaaatcacataattcagtgtaactacaagtgtcgt 41831945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 18407717 - 18407772
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||| |||||||||  ||||| ||||||||| || |||||||||||||||||    
T  18407717 ccgacacagctaataattcaaaaaaatcacataattcagtgtaattacaagtgtcg 18407772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 340 - 391
Target Start/End: Original strand, 28745505 - 28745556
Alignment:
Q  340 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||||||| ||||||||| |||||||| ||||| ||||| ||||    
T  28745505 ctaataatttgaaaaattcacataattcaatgtaactacaaatgtcgatgtc 28745556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 321 - 391
Target Start/End: Original strand, 31556985 - 31557054
Alignment:
Q  321 cactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||| ||||||||  ||||||||||||||| ||||||||| || ||||||||||||| ||| ||||    
T  31556985 cactgacacgccgacacagttaataatttgaaaaa-tcacataattcagtgtaattacaagtttcggtgtc 31557054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 30077439 - 30077394
Alignment:
Q  340 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||||||||||  ||||||||| || ||||||||||||||||    
T  30077439 ctaataatttgaaaacatcacataattcagtgtaattacaagtgtc 30077394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 9706844 - 9706796
Alignment:
Q  42 tttaagattatttacacataataagaaaactagtaaatttcgttacttt 90  Q
    |||||| |||||||||||||  |||||||| | ||||||||||||||||    
T  9706844 tttaaggttatttacacataccaagaaaaccaataaatttcgttacttt 9706796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 17468568 - 17468516
Alignment:
Q  332 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    ||||||||| ||||||||| |||| ||||||||| |  |||||||||||||||    
T  17468568 cgacacaacaaataatttgtaaaaatcacataatgcggtgtaattacaagtgt 17468516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 361
Target Start/End: Complemental strand, 24196672 - 24196628
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcaca 361  Q
    |||||||  |||| ||||||||||||||||||||||||| |||||    
T  24196672 cggacaccgacacgccgacacaactaataatttgaaaaaatcaca 24196628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 31236643 - 31236583
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||| |||||||  |||||||||||| ||| ||||||||| ||||||||||| | ||||||    
T  31236643 acacgccgacactgctaataatttgagaaaatcacataattcaatgtaattatatgtgtcg 31236583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 36934654 - 36934714
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    |||||||||||||  ||||||  ||||||||| |||||| ||||||||| || ||||||||    
T  36934654 cggacactaacacgtcgacaccgctaataattcgaaaaaatcacataattcattgtaatta 36934714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 342 - 386
Target Start/End: Original strand, 40332200 - 40332244
Alignment:
Q  342 aataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||||| ||| ||||||||| || |||||||||||||||||    
T  40332200 aataatttgagaaaatcacataattcagtgtaattacaagtgtcg 40332244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 387
Target Start/End: Original strand, 44067502 - 44067570
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 387  Q
    |||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  44067502 gacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 44067570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 1e-17; HSPs: 44)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 398
Target Start/End: Original strand, 34910289 - 34910382
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcgg 398  Q
    |||| ||||||||| ||||| | ||| ||||||||||||||||||||||||| ||||||||| || |||||||||||| |||| |||| ||||||    
T  34910289 cggatacggacaccagacacga-cacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagagtcggtgtcgtatcgg 34910382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 320 - 391
Target Start/End: Original strand, 10954939 - 10955010
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||| ||||||||||||||||||||||||| ||||||||| || |||||| |||||||||| ||||    
T  10954939 acactgacacgccgacacaactaataatttgaaaaaatcacataattcagtgtaatcacaagtgtcggtgtc 10955010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 10335361 - 10335287
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||||||||||||||||||||||||||| |  | ||||| ||||||||||| ||||    
T  10335361 cggacactgacacgccgacacaactaataatttgaaaaagtcacatattttagtgtaaatacaagtgtcggtgtc 10335287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 55401059 - 55401133
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| | || ||||||||||||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  55401059 cggacactgatacgccgacacaactaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 55401133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 320 - 384
Target Start/End: Complemental strand, 4987363 - 4987299
Alignment:
Q  320 acactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    ||||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  4987363 acactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 4987299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 14209106 - 14209165
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||| ||||||||||||||||||| ||||| ||||||||| || ||||||||||||||||    
T  14209106 acacgccgacacaactaataattttaaaaaatcacataattcagtgtaattacaagtgtc 14209165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 319 - 386
Target Start/End: Original strand, 20503451 - 20503518
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||| |||| |||||||||| |||||||||||||| | ||||||| || |||||||||||||||||    
T  20503451 gacactgacacgccgacacaacaaataatttgaaaaaatgacataattcagtgtaattacaagtgtcg 20503518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 8587096 - 8587022
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||||| ||| |||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  8587096 cggacactgacacgccgacacatctagtaatttgaaaaaatcacataattaagtgtaattacaagtgtcggtgtc 8587022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 391
Target Start/End: Original strand, 25775481 - 25775567
Alignment:
Q  306 gacacggacaccggacactaacacaccgacacaactaataatttgaaaa-agtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||| ||||||| |||| || |||||  |||||||||||||| | ||||||||| || ||||||||||||||||| ||||    
T  25775481 gacacggacactggacactgacacgccaacacatttaataatttgaaaataatcacataattcagtgtaattacaagtgtcggtgtc 25775567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 28917985 - 28918059
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||| |||| |||||| | |||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  28917985 cggaaactgacacgccgacatagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 28918059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 385
Target Start/End: Original strand, 14216845 - 14216944
Alignment:
Q  284 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    ||||||||||||||||||  | |||||| |||| ||||||| ||||  |||||||||||||||||| ||||  ||| ||||| || ||||||||||||||    
T  14216845 atgaagcacggatgcggacacagacacg-acac-ggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtg 14216942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 385
Target Start/End: Original strand, 14222974 - 14223073
Alignment:
Q  284 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    ||||||||||||||||||  | |||||| |||| ||||||| ||||  |||||||||||||||||| ||||  ||| ||||| || ||||||||||||||    
T  14222974 atgaagcacggatgcggacacagacacg-acac-ggacactgacacgtcgacacaactaataattttaaaatatcatataattcagtgtaattacaagtg 14223071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 299 - 391
Target Start/End: Original strand, 21479079 - 21479176
Alignment:
Q  299 ggatgcggacacggacaccggacacta-----acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||||||||||||||| |     |||| |||||||| |||||||||||||||| ||||| ||| || ||||||||| ||||||| ||||    
T  21479079 ggatacggacacggacaccggacacgacactgacacgccgacacagctaataatttgaaaaaatcacacaattcagtgtaattactagtgtcggtgtc 21479176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 333 - 386
Target Start/End: Original strand, 26508110 - 26508163
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||| |||||||||||||||| ||||||||| || |||||||||||||||||    
T  26508110 gacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 26508163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 28812508 - 28812573
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||||||||||||||||| || ||||||||| || |||| |||||||||||| ||||    
T  28812508 acacgccgacacaactaataatttgaagaaatcacataattcagtgtagttacaagtgtcggtgtc 28812573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 39756188 - 39756294
Alignment:
Q  284 atgaagcacggatgcggatgcggaca-cggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagt 382  Q
    |||||||||||||  |||| |||||| |||||||  |||||| |||| |||||| || ||||||||| ||||| |||||||||  ||| |||||||||||    
T  39756188 atgaagcacggatatggatacggacatcggacac--gacactgacacgccgacaaaattaataatttaaaaaaatcacataatttaatataattacaagt 39756285  T
Q  383 gtcgttgtc 391  Q
    |||| ||||    
T  39756286 gtcggtgtc 39756294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 331 - 400
Target Start/End: Complemental strand, 49651847 - 49651778
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggac 400  Q
    |||||||  |||||||||||||||| ||||||||| || ||||||||||||||||| |||| | ||||||    
T  49651847 ccgacacggctaataatttgaaaaaatcacataattcactgtaattacaagtgtcggtgtcgtgtcggac 49651778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 362
Target Start/End: Complemental strand, 10318119 - 10318064
Alignment:
Q  306 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacat 362  Q
    ||||||||||| ||||||| |||| |||||||| |||||||||||||||||||||||    
T  10318119 gacacggacac-ggacactgacacgccgacacagctaataatttgaaaaagtcacat 10318064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 284 - 381
Target Start/End: Original strand, 14747513 - 14747610
Alignment:
Q  284 atgaagcacggatgcggatgcggacac-ggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaag 381  Q
    ||||||||||||| ||||| ||||||| ||||||  |||||| |||| |||||||| ||||||||||| ||||| |||||||||  | ||||||||||||    
T  14747513 atgaagcacggatacggatacggacaccggacac--gacactgacacgccgacacagctaataatttgaaaaaaatcacataatttagtgtaattacaag 14747610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 391
Target Start/End: Original strand, 14829676 - 14829747
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||| |||||||| |||||||||||||||| ||||||||| ||  |||||||||||||||| ||||    
T  14829676 gacactgacacgccgacacagctaataatttgaaaaa-tcacataattcatggtaattacaagtgtcggtgtc 14829747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 16000089 - 16000017
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||| ||||||||||||||||||| ||||| | ||||||| || ||||| ||||||||||| ||||    
T  16000089 gacactgacacgccgacacaactaataatttaaaaaaataacataattcagtgtaactacaagtgtcggtgtc 16000017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 21305218 - 21305290
Alignment:
Q  306 gacacggacaccggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaatta 377  Q
    |||||||||||| ||||||||||| |||||||  ||||||||||| ||||| |||||||||  ||||||||||    
T  21305218 gacacggacaccagacactaacacgccgacacctctaataatttgaaaaaaatcacataattaaatgtaatta 21305290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 340 - 416
Target Start/End: Complemental strand, 25948939 - 25948863
Alignment:
Q  340 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacgtctaatccgagga 416  Q
    |||||||||||||||| ||||||||| || |||||||| |||||| | |||| | |||||||||| |||||| ||||    
T  25948939 ctaataatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggacacgtgtaatccaagga 25948863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 387
Target Start/End: Complemental strand, 35994798 - 35994743
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 387  Q
    |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||||    
T  35994798 ccgacacagctaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcgt 35994743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 1509534 - 1509597
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||| |||||||||||||||| |||||||||  | ||||||||||||||||| ||||    
T  1509534 acactgacacagctaataatttgaaaaaatcacataatttagtgtaattacaagtgtcggtgtc 1509597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 385
Target Start/End: Complemental strand, 10268560 - 10268493
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    ||||||| |||| ||||||||  ||||||||||||||| |||||||||  | ||||||||||||||||    
T  10268560 ggacactgacacgccgacacagttaataatttgaaaaaatcacataatttagtgtaattacaagtgtc 10268493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 14832092 - 14832151
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||| |||| ||| |||||||||||||||| ||||||||  |||||||||||||||||||    
T  14832092 acacgccgatacagctaataatttgaaaaaatcacataactcaatgtaattacaagtgtc 14832151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 328 - 391
Target Start/End: Complemental strand, 51206417 - 51206354
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||| |||||||||||||||| ||||||||| || ||||| ||||||||||| ||||    
T  51206417 acactgacacagctaataatttgaaaaaatcacataattcagtgtaaatacaagtgtcggtgtc 51206354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 365
Target Start/End: Complemental strand, 8413029 - 8412972
Alignment:
Q  308 cacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataat 365  Q
    ||||||||||||||| | ||| |||||||||||||||||||||| |||  ||||||||    
T  8413029 cacggacaccggacattgacagaccgacacaactaataatttgagaaaaacacataat 8412972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 333 - 386
Target Start/End: Complemental strand, 21257045 - 21256992
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||| |||||||||||||||| ||||||||| || | |||||||||||||||    
T  21257045 gacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcg 21256992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 299 - 385
Target Start/End: Complemental strand, 32400798 - 32400715
Alignment:
Q  299 ggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||| |||||||| |||||||||||| ||||  ||||||| |||||||||||||||  | |||||||    ||||||||||||||||    
T  32400798 ggatacggacacgaacaccggacactgacacggcgacacagctaataatttgaaaagattacataat---ttgtaattacaagtgtc 32400715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 41961723 - 41961651
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||| ||| ||||||||||||||||||||  |||||| || |  ||||||||||||||||| ||||    
T  41961723 gacactgacacgccgtcacaactaataatttgaaaatatcacattattcggtgtaattacaagtgtcggtgtc 41961651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 332 - 391
Target Start/End: Complemental strand, 750678 - 750619
Alignment:
Q  332 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||||||||||||||  ||||||||| |  || |||||||||||||| ||||    
T  750678 cgacacaactaataatttgaaaatatcacataattcgctgcaattacaagtgtcggtgtc 750619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 391
Target Start/End: Original strand, 7928445 - 7928508
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||  |||||||||||||||| ||||||||| || |||||||| | |||||| ||||    
T  7928445 acaccgacaccgctaataatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgtc 7928508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 15796369 - 15796295
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| | |||| ||||||||  ||||||||||||||| ||| ||||| || ||||||||||| ||||| ||||    
T  15796369 cggacaatgacacgccgacacagttaataatttgaaaaaatcatataattcagtgtaattacaattgtcggtgtc 15796295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 24205116 - 24205046
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 387  Q
    |||||||| |||| |||||||   ||||||||||| ||| | |||||||||| |||||||| |||||||||    
T  24205116 cggacactgacacgccgacacggataataatttgagaaaatgacataatacagtgtaattataagtgtcgt 24205046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 26492280 - 26492206
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||| | |||||||||||||||| ||| | ||| || ||||||||||||| ||| ||||    
T  26492280 cggacactgacacgccgacagagctaataatttgaaaaaatcatacaattcagtgtaattacaagtatcggtgtc 26492206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 40052318 - 40052364
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataat 365  Q
    |||||| |||| |||||||| |||||||||||||||| |||||||||    
T  40052318 gacactgacacgccgacacagctaataatttgaaaaaatcacataat 40052364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 376
Target Start/End: Original strand, 14979179 - 14979224
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaatt 376  Q
    |||||||| |||||||||||||||| ||||||||| || |||||||    
T  14979179 ccgacacagctaataatttgaaaaaatcacataattcagtgtaatt 14979224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 34185189 - 34185124
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| |||||||  |||||||||| ||||| ||||| ||| || ||||||||||||||||| ||||    
T  34185189 acacgccgacacggctaataatttcaaaaaatcacacaattcagtgtaattacaagtgtcggtgtc 34185124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 332 - 384
Target Start/End: Complemental strand, 3164085 - 3164033
Alignment:
Q  332 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    ||||||| |||||||||||||||| ||||||||| || |||||  ||||||||    
T  3164085 cgacacagctaataatttgaaaaaatcacataattcagtgtaagaacaagtgt 3164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 318 - 386
Target Start/End: Complemental strand, 17005693 - 17005625
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||||| || |||| |||| ||||||||||||| ||| ||| ||||| || |||||||| ||||||||    
T  17005693 ggacactgactcaccaacaccactaataatttgataaaatcatataattcagtgtaattataagtgtcg 17005625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 27505244 - 27505304
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| ||||||||||  |||| |||||||||  | ||||||||||||||||| ||||    
T  27505244 ccgacacagctaataatttttaaaaatcacataattaagtgtaattacaagtgtcggtgtc 27505304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 326 - 386
Target Start/End: Original strand, 29508437 - 29508497
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||||||| || ||||||||||||||||| ||| ||||| || |||||||| | ||||||    
T  29508437 acacaccgataccactaataatttgaaaaaatcatataattcagtgtaattatatgtgtcg 29508497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 317 - 384
Target Start/End: Original strand, 51795 - 51862
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||||| |||| |||||||| |||||||||||||||| ||||||||| || |||||||||||||||    
T  51795 cggacactgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 51862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 6e-16; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 317 - 418
Target Start/End: Original strand, 30298930 - 30299033
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatc-ggacacgtctaatccgag 414  Q
    |||||||| |||| |||||||| ||||||||||| ||||| | ||||||| || ||||||||||||||||| |||| |  | ||||||||||||||||||    
T  30298930 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30299029  T
Q  415 gagt 418  Q
    ||||    
T  30299030 gagt 30299033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 317 - 418
Target Start/End: Original strand, 30327798 - 30327901
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatc-ggacacgtctaatccgag 414  Q
    |||||||| |||| |||||||| ||||||||||| ||||| | ||||||| || ||||||||||||||||| |||| |  | ||||||||||||||||||    
T  30327798 cggacactgacacgccgacacagctaataatttgaaaaaaatgacataattcagtgtaattacaagtgtcggtgtcgtgccgggacacgtctaatccgag 30327897  T
Q  415 gagt 418  Q
    ||||    
T  30327898 gagt 30327901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 403
Target Start/End: Complemental strand, 12895182 - 12895105
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 403  Q
    |||| |||| ||| |||||||||||||||| ||||||||| ||| |||||||||||||||| |||| | |||||||||    
T  12895182 acacgccgaaacagctaataatttgaaaaaatcacataattcaaagtaattacaagtgtcggtgtcgtgtcggacacg 12895105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 332 - 391
Target Start/End: Complemental strand, 24613761 - 24613702
Alignment:
Q  332 cgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||||||||||||||| ||| ||||||||| |||||||| ||||||||||| ||||    
T  24613761 cgacacaactaataatttgagaaaatcacataattcaatgtaagtacaagtgtcggtgtc 24613702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 384
Target Start/End: Complemental strand, 11596438 - 11596360
Alignment:
Q  306 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||||||||| |||||| | || || ||| | |||||||||||||||| ||||||||| || |||||||||||||||    
T  11596438 gacacggacaccagacactgatacgccaacaaagctaataatttgaaaaaatcacataattcagtgtaattacaagtgt 11596360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 12797412 - 12797339
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||| || |||||||||||||||||| ||||||||| || ||||||||||||||||| ||||    
T  12797412 cggacactgacacgccggcaaaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgtcggtgtc 12797339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 23293061 - 23292987
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| | |||| |||||||| |||||||||||||||| ||||||||| || | ||||||||||||||| ||||    
T  23293061 cggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtataattacaagtgtcggtgtc 23292987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 309 - 386
Target Start/End: Original strand, 24543957 - 24544035
Alignment:
Q  309 acggacaccggacactaacacaccgacacaactaataatttgaaaaagt-cacataatacaatgtaattacaagtgtcg 386  Q
    ||||||||| |||||| |||| ||||||||||||||||||| ||||| | ||| |||| || |||||||||||||||||    
T  24543957 acggacaccagacactgacacgccgacacaactaataatttaaaaaaatacacttaatgcattgtaattacaagtgtcg 24544035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 333 - 391
Target Start/End: Complemental strand, 54580082 - 54580024
Alignment:
Q  333 gacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||||||||||||| ||||||||| || |||||||| |||||||| ||||    
T  54580082 gacacaactaataatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtc 54580024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 19482654 - 19482719
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||| |||| ||||||||||||||||||||||||  ||||||||| |  |||||||||||||||    
T  19482654 gacactgacacgccgacacaactaataatttgaaaatatcacataattcggtgtaattacaagtgt 19482719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 40481623 - 40481687
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||||    
T  40481623 gacactgacacgccgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 40481687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 403
Target Start/End: Complemental strand, 3947827 - 3947755
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtcctatcggacacg 403  Q
    |||||||| |||||||||||||||| || |||||| || ||||||||||||||||  |||| | |||||||||    
T  3947827 ccgacacagctaataatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacg 3947755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 391
Target Start/End: Original strand, 21945501 - 21945561
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||||||||||||||| | ||||||| || ||||||||||||||||| ||||    
T  21945501 ccgacacagctaataatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgtc 21945561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 41 - 127
Target Start/End: Original strand, 51978594 - 51978683
Alignment:
Q  41 ttttaagattatttacacataataagaaaactagtaaatttcgttacttttgatgaaatcattt---ctttttctattatacccttaact 127  Q
    ||||||||||||| ||||||| | ||||||||| ||||||| |||||||||||||  || ||||    ||||||||| ||||||||||||    
T  51978594 ttttaagattattgacacatacttagaaaactaataaattttgttacttttgatggtattatttgtcatttttctataatacccttaact 51978683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 384
Target Start/End: Complemental strand, 715677 - 715615
Alignment:
Q  323 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  715677 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 715615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 384
Target Start/End: Complemental strand, 753003 - 752941
Alignment:
Q  323 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  753003 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 752941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 298 - 391
Target Start/End: Original strand, 4157112 - 4157207
Alignment:
Q  298 cggatgcggacacggacaccggacacta---acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||||||||||||| ||||| |   | |||| ||||||||||||||||||||||| |||||||||  | || |||||||||||||| ||||    
T  4157112 cggatacggacacggacaccagacacgacacagacactgacacaactaataatttgaaaaa-tcacataatttagtgcaattacaagtgtcggtgtc 4157207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 319 - 385
Target Start/End: Complemental strand, 14126184 - 14126118
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    ||||||||||| |||||||   ||||||||||| ||||||||||||| || |||||||| |||||||    
T  14126184 gacactaacacgccgacactgttaataatttgataaagtcacataattcagtgtaattataagtgtc 14126118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 340 - 386
Target Start/End: Original strand, 29205451 - 29205497
Alignment:
Q  340 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    |||||||||||||||| ||||||||| || |||||||||||||||||    
T  29205451 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtcg 29205497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 35158060 - 35157986
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||| |||||||||||||| |||| |||||||||  | |||||||| |||||||| ||||    
T  35158060 cggacactgacacgccgacgcaactaataatttggaaaaatcacataatttagtgtaattataagtgtcggtgtc 35157986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 2362041 - 2361976
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||| |||||||||||||||| | |||||||  | |||||||| |||||||| ||||    
T  2362041 acacaccgacacagctaataatttgaaaaaattacataatttagtgtaattaaaagtgtcggtgtc 2361976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 334 - 379
Target Start/End: Complemental strand, 14465133 - 14465088
Alignment:
Q  334 acacaactaataatttgaaaaagtcacataatacaatgtaattaca 379  Q
    ||||| |||||||||||||||| ||||||||| |||||||||||||    
T  14465133 acacacctaataatttgaaaaaatcacataattcaatgtaattaca 14465088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 385
Target Start/End: Complemental strand, 28964300 - 28964255
Alignment:
Q  340 ctaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||||||||||| ||||||||| || ||||||||||||||||    
T  28964300 ctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 28964255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 284 - 365
Target Start/End: Complemental strand, 32273633 - 32273553
Alignment:
Q  284 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataat 365  Q
    |||||||||| || |||||  |||||| ||||||||||| | |||| || |||||||||||||||||||||| | |||||||    
T  32273633 atgaagcacgaatacggatatggacacagacaccggaca-tgacacgccaacacaactaataatttgaaaaaataacataat 32273553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 4383352 - 4383419
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||| ||||  ||| |||||||||||||||||||| ||||||||| || ||||||||||| ||||    
T  4383352 cggacactgacacgtcgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaaatgtc 4383419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 366
Target Start/End: Complemental strand, 11110768 - 11110708
Alignment:
Q  306 gacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataata 366  Q
    ||||||||||||||||||  |||| |||||||||  |||||||||||||  ||||||||||    
T  11110768 gacacggacaccggacacagacacgccgacacaaggaataatttgaaaatatcacataata 11110708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 311 - 391
Target Start/End: Original strand, 16073373 - 16073452
Alignment:
Q  311 ggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| |||| || |||| || |||||| ||||||||||||||| || |||||| || ||||||||||||||||| ||||    
T  16073373 ggacactggactctgacacgccaacacaagtaataatttgaaaaa-tcgcataattcagtgtaattacaagtgtcggtgtc 16073452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 387
Target Start/End: Original strand, 20633469 - 20633536
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 387  Q
    |||||||| ||||  ||||||  ||||||||||||||||   ||||||| |||||||||||||||||||||    
T  20633469 cggacactgacacgtcgacaccgctaataatttgaaaaa---acataattcaatgtaattacaagtgtcgt 20633536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 385
Target Start/End: Original strand, 28084514 - 28084574
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtc 385  Q
    |||| |||||||| |||| |||||||||||  ||||||||| |||||||||||||||||||    
T  28084514 acacgccgacacagctaagaatttgaaaaaaatcacataattcaatgtaattacaagtgtc 28084574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 326 - 386
Target Start/End: Complemental strand, 31800544 - 31800484
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||||||||||| |||||||||| ||||| | | |||||  |||||||||||||||||||    
T  31800544 acacaccgacacagctaataattttaaaaaattaaataatttaatgtaattacaagtgtcg 31800484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 34306864 - 34306805
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||||||||||||||| ||| |||||  | ||||||||||||||||| ||||    
T  34306864 ccgacacaactaataatttgaaaaa-tcagataatgtagtgtaattacaagtgtcggtgtc 34306805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 326 - 385
Target Start/End: Complemental strand, 38847078 - 38847019
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||| |||||||| |||||||||||||||| ||| || || || ||||||||||||||||    
T  38847078 acactccgacacagctaataatttgaaaaaatcatattattcagtgtaattacaagtgtc 38847019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 49431009 - 49431084
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttg-aaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||| | |||| |||||||| ||||||||||| ||||| ||||||||| || |||||||| |||||||| ||||    
T  49431009 cggacagtgacacgccgacacagctaataatttgaaaaaaatcacataattcagtgtaattaaaagtgtcggtgtc 49431084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 318 - 384
Target Start/End: Complemental strand, 27706251 - 27706185
Alignment:
Q  318 ggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    ||||||| ||||  |||||||| ||||||||| ||||| |||||||||  | |||||||||||||||    
T  27706251 ggacactgacacgtcgacacaattaataatttaaaaaaatcacataatttagtgtaattacaagtgt 27706185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 341 - 386
Target Start/End: Complemental strand, 6485662 - 6485617
Alignment:
Q  341 taataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||||||||||||| |||||||||  | |||||||||||||||||    
T  6485662 taataatttgaaaaaatcacataatttagtgtaattacaagtgtcg 6485617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 391
Target Start/End: Complemental strand, 12895340 - 12895275
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||||||||| ||||||||||||||| |||||||||    |||||||| |||||||| ||||    
T  12895340 acacgccgacacaaataataatttgaaaaaatcacataattttgtgtaattataagtgtcggtgtc 12895275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 384
Target Start/End: Original strand, 37203239 - 37203315
Alignment:
Q  305 ggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    ||||||||||||||||||| |   ||| |||||  |||||||||||||||| | |||||||  | |||||||||||||||    
T  37203239 ggacacggacaccggacacga---cacagacacggctaataatttgaaaaaatgacataatttagtgtaattacaagtgt 37203315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 40 - 99
Target Start/End: Original strand, 3929573 - 3929630
Alignment:
Q  40 gttttaagattatttacacataataagaaaactagtaaatttcgttacttttgatgaaat 99  Q
    |||||||| ||||||||||||  ||||||||| | ||||||| |||| ||||||||||||    
T  3929573 gttttaagtttatttacacat--taagaaaaccaataaattttgttatttttgatgaaat 3929630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 317 - 377
Target Start/End: Original strand, 36635308 - 36635368
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaatta 377  Q
    |||||||| |||| || |||| ||||||||||||| ||| ||||||||| || ||||||||    
T  36635308 cggacactgacacgccaacaccactaataatttgagaaaatcacataattcagtgtaatta 36635368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 328 - 384
Target Start/End: Original strand, 51701253 - 51701309
Alignment:
Q  328 acaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||| |||||| |||||||||||||||| | |||||||  | |||||||||||||||    
T  51701253 acacggacacagctaataatttgaaaaaattacataattgagtgtaattacaagtgt 51701309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0361 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0361
Description:

Target: scaffold0361; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 326 - 383
Target Start/End: Original strand, 14523 - 14580
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    |||| ||||||||||||||||||||||||| ||||||||| || ||||||||||||||    
T  14523 acacgccgacacaactaataatttgaaaaaatcacataattcagtgtaattacaagtg 14580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 317 - 385
Target Start/End: Complemental strand, 178894 - 178825
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtca-cataatacaatgtaattacaagtgtc 385  Q
    |||||||| |||| ||||||||||||||||||||||||| ||| |||||| || ||||||||||||||||    
T  178894 cggacactgacacgccgacacaactaataatttgaaaaaatcatcataattcagtgtaattacaagtgtc 178825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 20156 - 20224
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||| | |||| |||||||| |||||||||||||||| ||||||||| || ||||||||||||||||    
T  20156 cggacaatgacacgccgacacagctaataatttgaaaaaatcacataattcagtgtaattacaagtgtc 20224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0306 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0306
Description:

Target: scaffold0306; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 13384 - 13458
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||| || || ||||||||| |||| ||||    
T  13384 cggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 13458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 21943 - 21869
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| ||||||||||||||||||||| ||| ||||||||| || || ||||||||| |||| ||||    
T  21943 cggacactgacacgccgacacaactaataatttgagaaaatcacataattcagtgcaattacaagggtcggtgtc 21869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 317 - 387
Target Start/End: Complemental strand, 225343 - 225273
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgt 387  Q
    |||||||| |||| ||||||||  ||||||||||| ||| | ||||||||||||||||||| |||||||||    
T  225343 cggacactgacacgccgacacagataataatttgagaaaatgacataatacaatgtaattataagtgtcgt 225273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 384
Target Start/End: Original strand, 19562 - 19626
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||| |||| |||| |||||||||||||||||||| ||||||||| || |||||||||||||||    
T  19562 gacactgacacgccgatacaactaataatttgaaaaa-tcacataattcagtgtaattacaagtgt 19626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 326 - 391
Target Start/End: Original strand, 8003 - 8067
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||||||||||||||||||||||||| ||| |||||||| |||||||| |||||||| ||||    
T  8003 acacgccgacacaactaataatttgaaaaaatcatataatacagtgtaatta-aagtgtcggtgtc 8067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 304 - 391
Target Start/End: Original strand, 23740 - 23828
Alignment:
Q  304 cggacacggacaccggacactaacacaccgacacaactaataatttgaaaaag-tcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||| ||| |||||||||||| |||||| | ||||  |||||||||||||||  ||||||||| || ||||||||||||||||| ||||    
T  23740 cggatacgaacaccggacactgacacactgtcacagttaataatttgaaaaaaatcacataattcagtgtaattacaagtgtcggtgtc 23828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 284 - 391
Target Start/End: Original strand, 46628 - 46740
Alignment:
Q  284 atgaagcacggatgcggatgcggaca-cggacac----cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattac 378  Q
    ||||||||||||| ||||  |||||| |||||||    |||||| | |||| ||||||||  ||||||||||||||| ||||||||| || |||||||||    
T  46628 atgaagcacggatacggacacggacatcggacacgacacggacaatgacacgccgacacagttaataatttgaaaaaatcacataattcagtgtaattac 46727  T
Q  379 aagtgtcgttgtc 391  Q
    || ||||| ||||    
T  46728 aaatgtcggtgtc 46740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0793 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0793
Description:

Target: scaffold0793; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 323 - 384
Target Start/End: Complemental strand, 4953 - 4891
Alignment:
Q  323 ctaacacaccgacacaactaataattt-gaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||||||||||||||| ||||||||||  ||||| ||||||||| || |||||||||||||||    
T  4953 ctaacacaccgacacagctaataatttaaaaaaaatcacataattcagtgtaattacaagtgt 4891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0652 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0652
Description:

Target: scaffold0652; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Complemental strand, 537 - 463
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| | || |||||||  |||||||||||||||| ||||| ||| || ||||||||||||||||| ||||    
T  537 cggacactgatacgccgacactgctaataatttgaaaaaatcacaaaattcagtgtaattacaagtgtcggtgtc 463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0053 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 8782 - 8856
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||||| |||||||||||||||| ||| || ||  | ||||||||||||||||| ||||    
T  8782 cggacactgacacgccgacacagctaataatttgaaaaaatcatattatttagtgtaattacaagtgtcggtgtc 8856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 317 - 354
Target Start/End: Complemental strand, 10546 - 10509
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaa 354  Q
    |||||||||||||||||||||| |||||||||||||||    
T  10546 cggacactaacacaccgacacagctaataatttgaaaa 10509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 385
Target Start/End: Original strand, 92791 - 92859
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    |||||||| |||| |||||||  |||||||||||| ||| | ||||||| || ||||||||||||||||    
T  92791 cggacactgacacgccgacaccgctaataatttgagaaaattacataattcagtgtaattacaagtgtc 92859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 284 - 403
Target Start/End: Original strand, 23373 - 23490
Alignment:
Q  284 atgaagcacggatgcggatgcggacacggacaccggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtg 383  Q
    ||||||||||||| ||||  ||||||| |||| | |||||| |||| ||||||||  |||||| |  ||||| ||||||||| || |||||||| |||||    
T  23373 atgaagcacggatacggacacggacac-gaca-cagacactgacacgccgacacagataataactcaaaaaaatcacataattcagtgtaattataagtg 23470  T
Q  384 tcgttgtcctatcggacacg 403  Q
    ||| |||| | |||||||||    
T  23471 tcggtgtcgtgtcggacacg 23490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 331 - 386
Target Start/End: Original strand, 130480 - 130535
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcg 386  Q
    ||||||||  ||||| ||||||||| ||||||||| || |||||||||||||||||    
T  130480 ccgacacagttaatagtttgaaaaaatcacataattcagtgtaattacaagtgtcg 130535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 384
Target Start/End: Complemental strand, 7377 - 7319
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgt 384  Q
    |||| |||||||||||||||||||| |||| |||||||||  | |||||||| ||||||    
T  7377 acacgccgacacaactaataatttggaaaaatcacataatttagtgtaattataagtgt 7319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 326 - 380
Target Start/End: Complemental strand, 33429 - 33375
Alignment:
Q  326 acacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaa 380  Q
    |||| |||||||| |||||||||||||||| | ||||||| || |||||||||||    
T  33429 acacgccgacacagctaataatttgaaaaaataacataattcagtgtaattacaa 33375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 317 - 391
Target Start/End: Original strand, 241578 - 241652
Alignment:
Q  317 cggacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    |||||||| |||| |||||||| ||||||||||| |||| |||||||||  | ||||||||  ||||||| ||||    
T  241578 cggacactgacacgccgacacagctaataatttggaaaaatcacataatttagtgtaattatgagtgtcggtgtc 241652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0187 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 4567 - 4620
Alignment:
Q  166 attgacaaaataatagttaatgttgcattaaaatttaaaaacaacaaataaata 219  Q
    |||| ||| ||||||||||||||| ||| ||| |||||||||||||| ||||||    
T  4567 attgtcaagataatagttaatgttacataaaactttaaaaacaacaattaaata 4620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0450 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0450
Description:

Target: scaffold0450; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 331 - 391
Target Start/End: Complemental strand, 8696 - 8636
Alignment:
Q  331 ccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||||||||||||||||||||||  ||||||||| |  | ||||||||| ||||| ||||    
T  8696 ccgacacaactaataatttgaaaatatcacataattcggtataattacaaatgtcggtgtc 8636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0136 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 341 - 385
Target Start/End: Complemental strand, 3900 - 3856
Alignment:
Q  341 taataatttgaaaaagtcacataatacaatgtaattacaagtgtc 385  Q
    ||||||||| ||||| ||||||||| || ||||||||||||||||    
T  3900 taataatttaaaaaaatcacataattcagtgtaattacaagtgtc 3856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 372 - 332
Alignment:
Q  165 tattgacaaaataatagttaatgttgcattaaaatttaaaa 205  Q
    ||||||||| | |||| ||||||||||||||||||||||||    
T  372 tattgacaagacaataattaatgttgcattaaaatttaaaa 332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 319 - 391
Target Start/End: Complemental strand, 135385 - 135313
Alignment:
Q  319 gacactaacacaccgacacaactaataatttgaaaaagtcacataatacaatgtaattacaagtgtcgttgtc 391  Q
    ||||| |||||||||||||  |||||||||||| ||| ||||||||| |  |||||||| | |||||| ||||    
T  135385 gacaccaacacaccgacactgctaataatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtc 135313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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