View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7721_low_52 (Length: 388)
Name: NF7721_low_52
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7721_low_52 |
 | |
|
| [»] scaffold1029 (1 HSPs) |
| | |
|
| [»] scaffold1033 (1 HSPs) |
| | |
|
| [»] scaffold0889 (1 HSPs) |
| | |
|
| [»] scaffold0870 (1 HSPs) |
| | |
|
Alignment Details
Target: scaffold1029 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: scaffold1029
Description:
Target: scaffold1029; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 79 - 374
Target Start/End: Complemental strand, 3328 - 3034
Alignment:
| Q |
79 |
aaagtagtgttcaatgccaaacctttggataatatcaatcaaataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaat |
178 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3328 |
aaagtagtgttcaatgccaaacctttggataatatcaatcaaataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaat |
3229 |
T |
|
| Q |
179 |
atcaaagcttgtttgacatatgtagcatcctgaaaatgtaaaagtgtagattgatcagtactttgaaattaaaatattttaaatttgaacagctgtatat |
278 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
3228 |
atcaaagcttgtttgacatatgtagcatcctgaaaatgtaaaagtgcagattgatcagtactttgaaa-taaaatattttaaatttgaacagctgtatat |
3130 |
T |
|
| Q |
279 |
atttgtacttcaattaaaatacttaccattctggaaattaatgctttgatagtaaattaaaacagacttgattcagtgtttatagctggggatatt |
374 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3129 |
atttgtacttcaattaaaatacttaccattctggaaattaatgctttgatagtaaattaaaacagacttgattcagtgtttatagctggggatatt |
3034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 255; Significance: 1e-142; HSPs: 6)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 255; E-Value: 1e-142
Query Start/End: Original strand, 20 - 374
Target Start/End: Original strand, 28580122 - 28580474
Alignment:
| Q |
20 |
ataggattggtgtttaatatcaaatgtagcttttcaagagccactttgatctcctcagcaaagtagtgttcaatgccaaacctttggataatatcaatca |
119 |
Q |
| |
|
||||||||| |||| |||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28580122 |
ataggattgttgttcaatatcaaatgtagtttttcaagagccactttgatctcctcggtaaagtagtgttcaatgccaaacctttggataatatcaatca |
28580221 |
T |
|
| Q |
120 |
aataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaaaatgtaa |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||||||||| |
|
|
| T |
28580222 |
aataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttgaatatcaaagcttgtttgacatatgtaacgtcctgaaaatgtaa |
28580321 |
T |
|
| Q |
220 |
aagtgtagattgatcagtactttgaaattaaa--atattttaaattt-gaacagctgtatatatttgtacttcaattaaaatacttaccattctggaaat |
316 |
Q |
| |
|
||||||||||||||||| || ||| ||| ||| ||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28580322 |
aagtgtagattgatcagaacattgcaataaaaagatattctaaatttagaacaattgtatatatttgtacttcaattaaaatacttaccattctggaaat |
28580421 |
T |
|
| Q |
317 |
taatgctttgatagtaaattaaaacagacttgattcagtgtttatagctggggatatt |
374 |
Q |
| |
|
|||||||||||| | ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
28580422 |
taatgctttgat-----aataaaacagacttgattcagtgtttatagctggggatatt |
28580474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 20 - 371
Target Start/End: Original strand, 28575069 - 28575422
Alignment:
| Q |
20 |
ataggattggtgtttaatatcaaatgtagcttttcaagagccactttgatctcctcagcaaagtagtgttcaatgccaaacctttggataatatcaatca |
119 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||| |
|
|
| T |
28575069 |
ataggattggtgttcaatatcaaatgtagcttttcaagagccactttgatctcctcagcaaaatagtgttcaatgccaaacctttggatgatatcgatca |
28575168 |
T |
|
| Q |
120 |
aataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaaaatgtaa |
219 |
Q |
| |
|
|||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||||||||||| || | |
|
|
| T |
28575169 |
aataaaaactctccatcgaatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgcttaacatatgtaacatcctgaaaaagtca |
28575268 |
T |
|
| Q |
220 |
aagtgtagattgatcagtactttgaaattaaaatattt------taaattt-gaacagctgtatatatttgtacttcaattaaaatacttaccattctgg |
312 |
Q |
| |
|
||||| ||||||||||| || ||||||| || ||| | ||| ||| ||| | |||||||||||||||||||| ||||||||||||||||||| | |
|
|
| T |
28575269 |
aagtgcagattgatcagaacattgaaataaagctatgttgtaactaagtttagaataactgtatatatttgtacttcagttaaaatacttaccattctag |
28575368 |
T |
|
| Q |
313 |
aaattaatgctttgatagtaaattaaaacagacttgattcagtgtttatagctggggat |
371 |
Q |
| |
|
|||||||||||||||| | ||||||||||||||||| |||||||||||||||||| |
|
|
| T |
28575369 |
aaattaatgctttgat-----aataaaacagacttgattcggtgtttatagctggggat |
28575422 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 25 - 367
Target Start/End: Original strand, 28586284 - 28586611
Alignment:
| Q |
25 |
attggtgtttaatatcaaatgtagcttttcaagagccactttgatctcctcagcaaagtagtgttcaatgccaaacctttggataatatcaatcaaataa |
124 |
Q |
| |
|
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||| |
|
|
| T |
28586284 |
attggtgttcaatgtcaaatgtagcttttcaagagccactttgatctcctcagcaaaatagtgttcaatgccaaacctttggataatatcgatcaaataa |
28586383 |
T |
|
| Q |
125 |
aaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaaaatgtaaaagtg |
224 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
28586384 |
aaactttccatcggatcttcaattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaaagtg |
28586483 |
T |
|
| Q |
225 |
tagattgatcagtactttgaaattaaaatattttaaatttgaacagctgtatatatttgtacttcaattaaaatacttaccattctggaaattaatgctt |
324 |
Q |
| |
|
||||||||||| | ||||||| |||||| || |||| ||| | |||||| |||||||| ||||||||||||||||||||||||||| |
|
|
| T |
28586484 |
cagattgatcagaatattgaaataaaaatacatt-tctttg---------atacaactgtactccaattaaattacttaccattctggaaattaatgctt |
28586573 |
T |
|
| Q |
325 |
tgatagtaaattaaaacagacttgattcagtgtttatagctgg |
367 |
Q |
| |
|
|||||| ||||||||||||||||||||||||||| |||| |
|
|
| T |
28586574 |
tgatag-----taaaacagacttgattcagtgtttataactgg |
28586611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 196; E-Value: 1e-106
Query Start/End: Original strand, 21 - 374
Target Start/End: Original strand, 26316128 - 26316478
Alignment:
| Q |
21 |
taggattggtgtttaatatcaaatgtagcttttcaagagccactttgatctcctcagcaaagtagtgttcaatgccaaacctttggataatatcaatcaa |
120 |
Q |
| |
|
||||||||||||| |||||| ||| |||||| |||||||||||||||||||| ||| ||||||||||||||||| || ||||||||| ||||| ||||| |
|
|
| T |
26316128 |
taggattggtgttcaatatcgaatatagcttctcaagagccactttgatctcttcaacaaagtagtgttcaatgttaagcctttggatgatatcgatcaa |
26316227 |
T |
|
| Q |
121 |
ataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaaaatgtaaa |
220 |
Q |
| |
|
||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
26316228 |
ataaaaactctccatcggatattcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtaacatcctgaaaatgtaaa |
26316327 |
T |
|
| Q |
221 |
agtgtagattgatcagtactttgaaattaaa-atattttaaat-ttgaacagctgtatatatttgtacttcaattaaaatacttaccattctggaaatta |
318 |
Q |
| |
|
|||| ||| |||| || || ||||||| ||| ||||| ||||| | ||||| || ||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
26316328 |
agtgcagaatgatgagaacattgaaataaaatatattgtaaatctagaacaactttatatatttgtacttcaattaaaatacttaccattctataaatta |
26316427 |
T |
|
| Q |
319 |
atgctttgatagtaaattaaaacagacttgattcagtgtttatagctggggatatt |
374 |
Q |
| |
|
||| |||||||| ||||||| |||||||||||||||||| | || ||||||| |
|
|
| T |
26316428 |
atgatttgatag-----taaaacaaacttgattcagtgtttatggttgaggatatt |
26316478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 13 - 346
Target Start/End: Original strand, 28568222 - 28568566
Alignment:
| Q |
13 |
atcaattataggattggtgtttaatatcaaatgtagcttttcaagagccactttgatctcctcagcaaagtagtgttcaatgccaaacctttggataata |
112 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || ||||||||||||||||| || ||||||||||| ||||| ||||| |||||||||||||||||| |
|
|
| T |
28568222 |
atcaattataggattggtgttcaatatcaaatgcagattttcaagagccacttttatttcctcagcaaaatagtgctcaataccaaacctttggataata |
28568321 |
T |
|
| Q |
113 |
tcaatcaaataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaa |
212 |
Q |
| |
|
|| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||| || |
|
|
| T |
28568322 |
tccatcaaataaaaactctccatcggatcttcgattttaacaagtttcttataaacttgcttaaatattaaagcttgtttgacatatacaacatcctaaa |
28568421 |
T |
|
| Q |
213 |
aatgtaaaagtgtagattgatcagtactttgaaattaaaatattt----------taaattt-gaacagctgtatatatttgtacttcaattaaaatact |
301 |
Q |
| |
|
| ||||| |||| ||||||||||| | ||||||| || ||| | ||||||| ||| ||||||||||||| ||||||||||||||||||| |
|
|
| T |
28568422 |
attgtaagagtgcagattgatcagaatattgaaataaagctatatatgttgtaactaaatttagaatagctgtatatattcgtacttcaattaaaatact |
28568521 |
T |
|
| Q |
302 |
taccattctggaaattaatgctttgatagtaaattaaaacagact |
346 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||| |
|
|
| T |
28568522 |
taccattctagaaattaatgctttgatagtaaattaaaacagact |
28568566 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 53 - 218
Target Start/End: Original strand, 20618506 - 20618671
Alignment:
| Q |
53 |
tcaagagccactttgatctcctcagcaaagtagtgttcaatgccaaacctttggataatatcaatcaaataaaaactttccatcggatcttcgattttaa |
152 |
Q |
| |
|
||||||||||||||||| |||||| |||||||||||||||| |||| ||||||||| || |||||||||| |||| | || | |||||||| | ||| |
|
|
| T |
20618506 |
tcaagagccactttgatttcctcaacaaagtagtgttcaataccaagcctttggatgatgtcaatcaaatgaaaattctcagttggatcttcactagtaa |
20618605 |
T |
|
| Q |
153 |
caagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaaaatgta |
218 |
Q |
| |
|
|||||||||| | |||||||||| | ||||||||||| |||||||| |||||||||||||||||| |
|
|
| T |
20618606 |
caagtttcttgtgaacttgcttacacatcaaagcttgcttgacataaatagcatcctgaaaatgta |
20618671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold1033 (Bit Score: 226; Significance: 1e-124; HSPs: 1)
Name: scaffold1033
Description:
Target: scaffold1033; HSP #1
Raw Score: 226; E-Value: 1e-124
Query Start/End: Original strand, 137 - 374
Target Start/End: Complemental strand, 3270 - 3034
Alignment:
| Q |
137 |
ggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaaaatgtaaaagtgtagattgatcag |
236 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
3270 |
ggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaaaatgtaaaagtgcagattgatcag |
3171 |
T |
|
| Q |
237 |
tactttgaaattaaaatattttaaatttgaacagctgtatatatttgtacttcaattaaaatacttaccattctggaaattaatgctttgatagtaaatt |
336 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3170 |
tactttgaaat-aaaatattttaaatttgaacagctgtatatatttgtacttcaattaaaatacttaccattctggaaattaatgctttgatagtaaatt |
3072 |
T |
|
| Q |
337 |
aaaacagacttgattcagtgtttatagctggggatatt |
374 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| |
|
|
| T |
3071 |
aaaacagacttgattcagtgtttatagctggggatatt |
3034 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 155; Significance: 3e-82; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 20 - 374
Target Start/End: Original strand, 24071750 - 24072094
Alignment:
| Q |
20 |
ataggattggtgtttaatatcaaatgtagcttttcaagagccactttgatctcctcagcaaagtagtgttcaatgccaaacctttggataatatcaatca |
119 |
Q |
| |
|
|||||||||||||| ||||||||||| | |||||||||||| |||||||||| ||| ||||||||||||||||| ||||| ||||||| ||||| |||| |
|
|
| T |
24071750 |
ataggattggtgttcaatatcaaatgcaagttttcaagagccgctttgatctcgtcaacaaagtagtgttcaatgtcaaacttttggatgatatcgatca |
24071849 |
T |
|
| Q |
120 |
aataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaaaatgtaa |
219 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| |
|
|
| T |
24071850 |
aataaaaacactccatcggatcttcgattttaacaagtttctcataaacttgcttaaatatcaaagcttgtttgacataagtaacatcctgaaaatgtaa |
24071949 |
T |
|
| Q |
220 |
aagtgtagattgatcagtactttgaaat-taaa---atattttaaatt-tgaacagctgtatatatttgtacttcaattaaaatacttaccattctggaa |
314 |
Q |
| |
|
||||| | ||||||||| || || |||| | || ||||| |||||| ||||| |||||| || |||||||||||||||||||||||| |
|
|
| T |
24071950 |
aagtgcatattgatcagaacattaaaatatgaatatatattgtaaattcagaacatatgtata----------tctattaaaatacttaccattctggaa |
24072039 |
T |
|
| Q |
315 |
attaatgctttgatagtaaattaaaacagacttgattcagtgtttatagctggggatatt |
374 |
Q |
| |
|
|||||||||||||||| |||||||||||||||||| ||||||||| ||| |||||| |
|
|
| T |
24072040 |
attaatgctttgatag-----taaaacagacttgattcaatgtttatagttggagatatt |
24072094 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0889 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0889
Description:
Target: scaffold0889; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 4663 - 4358
Alignment:
| Q |
13 |
atcaattataggattggtgtttaatatcaaatgtagcttttcaagagccactttgatctcctcagcaaagtagtgttcaatgccaaacctttggataata |
112 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || |||||||||||||| || || ||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
4663 |
atcaattataggattggtgttcaatatcaaatgcagattttcaagagccacatttatttcctcagcaaaatagtgttcaataccaaacctttggataata |
4564 |
T |
|
| Q |
113 |
tcaatcaaataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaa |
212 |
Q |
| |
|
|| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| || |
|
|
| T |
4563 |
tcgatcaaataaaaactctccatgggatcttcgattttaacaagtttcttataaactttcttaaatatcaaagcttgtttgacatataaaacatcctaaa |
4464 |
T |
|
| Q |
213 |
aatgtaaaagtgtagattgatcagtactttgaaatt---aaaatattt------taaattt-gaacagctgtatatatttgtacttcaattaaaatactt |
302 |
Q |
| |
|
|||||||||||| ||||||||| || |||||||| ||| ||| | ||||||| ||| | ||||||||||| ||| |||||||||||||||| |
|
|
| T |
4463 |
aatgtaaaagtg--cattgatcagaacattgaaattataaaactatgttgtaaataaatttagaataactgtatatattggtatttcaattaaaatactt |
4366 |
T |
|
| Q |
303 |
accattct |
310 |
Q |
| |
|
|||||||| |
|
|
| T |
4365 |
accattct |
4358 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0870 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0870
Description:
Target: scaffold0870; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 13 - 310
Target Start/End: Complemental strand, 4867 - 4562
Alignment:
| Q |
13 |
atcaattataggattggtgtttaatatcaaatgtagcttttcaagagccactttgatctcctcagcaaagtagtgttcaatgccaaacctttggataata |
112 |
Q |
| |
|
||||||||||||||||||||| ||||||||||| || |||||||||||||| || || ||||||||||| ||||||||||| |||||||||||||||||| |
|
|
| T |
4867 |
atcaattataggattggtgttcaatatcaaatgcagattttcaagagccacatttatttcctcagcaaaatagtgttcaataccaaacctttggataata |
4768 |
T |
|
| Q |
113 |
tcaatcaaataaaaactttccatcggatcttcgattttaacaagtttcttataaacttgcttaaatatcaaagcttgtttgacatatgtagcatcctgaa |
212 |
Q |
| |
|
|| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||| || |
|
|
| T |
4767 |
tcgatcaaataaaaactctccatgggatcttcgattttaacaagtttcttataaactttcttaaatatcaaagcttgtttgacatataaaacatcctaaa |
4668 |
T |
|
| Q |
213 |
aatgtaaaagtgtagattgatcagtactttgaaatt---aaaatattt------taaattt-gaacagctgtatatatttgtacttcaattaaaatactt |
302 |
Q |
| |
|
|||||||||||| ||||||||| || |||||||| ||| ||| | ||||||| ||| | ||||||||||| ||| |||||||||||||||| |
|
|
| T |
4667 |
aatgtaaaagtg--cattgatcagaacattgaaattataaaactatgttgtaaataaatttagaataactgtatatattggtatttcaattaaaatactt |
4570 |
T |
|
| Q |
303 |
accattct |
310 |
Q |
| |
|
|||||||| |
|
|
| T |
4569 |
accattct |
4562 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 141
Target Start/End: Complemental strand, 2600758 - 2600685
Alignment:
| Q |
68 |
atctcctcagcaaagtagtgttcaatgccaaacctttggataatatcaatcaaataaaaactttccatcggatc |
141 |
Q |
| |
|
|||||||||||||||| ||||||||||||| |||||||||||| ||||||| | ||||||| ||||||||| |
|
|
| T |
2600758 |
atctcctcagcaaagtgatgttcaatgccaagcctttggataatgtcaatcatgcacaaacttttcatcggatc |
2600685 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 298 - 374
Target Start/End: Complemental strand, 34812997 - 34812926
Alignment:
| Q |
298 |
tacttaccattctggaaattaatgctttgatagtaaattaaaacagacttgattcagtgtttatagctggggatatt |
374 |
Q |
| |
|
|||| ||||||||| |||||||||||||||| | ||||||||||||||||| |||||||||| ||| |||||| |
|
|
| T |
34812997 |
tactaaccattctgaaaattaatgctttgat-----aataaaacagacttgattcggtgtttataggtggagatatt |
34812926 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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