View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7721_low_67 (Length: 340)

Name: NF7721_low_67
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7721_low_67
NF7721_low_67
[»] chr5 (43 HSPs)
chr5 (1-326)||(36175174-36175499)
chr5 (4-201)||(24260560-24260757)
chr5 (1-217)||(26120905-26121120)
chr5 (1-256)||(22755562-22755821)
chr5 (99-256)||(20744469-20744630)
chr5 (1-256)||(24266758-24267013)
chr5 (1-256)||(24343389-24343644)
chr5 (1-146)||(17171467-17171611)
chr5 (98-256)||(24265271-24265436)
chr5 (98-256)||(24341902-24342067)
chr5 (1-253)||(18208054-18208307)
chr5 (1-254)||(34487678-34487930)
chr5 (97-217)||(26121165-26121286)
chr5 (1-61)||(24245542-24245602)
chr5 (103-256)||(17432025-17432183)
chr5 (1-217)||(15690818-15691034)
chr5 (30-256)||(17635349-17635575)
chr5 (99-181)||(16523680-16523764)
chr5 (102-181)||(17314990-17315070)
chr5 (99-181)||(20315307-20315390)
chr5 (104-181)||(24245421-24245499)
chr5 (74-244)||(24661989-24662161)
chr5 (101-181)||(28664902-28664983)
chr5 (99-181)||(20563969-20564053)
chr5 (4-157)||(18937791-18937945)
chr5 (1-60)||(20315429-20315488)
chr5 (3-61)||(19004224-19004282)
chr5 (77-167)||(19283748-19283837)
chr5 (99-212)||(17474493-17474605)
chr5 (7-60)||(39434509-39434562)
chr5 (1-61)||(15375880-15375940)
chr5 (1-61)||(20549702-20549762)
chr5 (102-173)||(20858814-20858886)
chr5 (1-61)||(23388836-23388896)
chr5 (1-60)||(24140483-24140542)
chr5 (102-175)||(24140577-24140651)
chr5 (4-58)||(24852173-24852227)
chr5 (1-59)||(25402337-25402395)
chr5 (1-59)||(25550504-25550562)
chr5 (131-181)||(34128807-34128857)
chr5 (102-256)||(24167386-24167541)
chr5 (110-201)||(24852030-24852121)
chr5 (1-61)||(28664815-28664875)
[»] scaffold0024 (1 HSPs)
scaffold0024 (74-254)||(39699-39882)
[»] chr6 (56 HSPs)
chr6 (1-212)||(23645614-23645825)
chr6 (74-256)||(8241389-8241571)
chr6 (1-256)||(28933458-28933718)
chr6 (1-158)||(24252131-24252287)
chr6 (1-256)||(15466410-15466664)
chr6 (1-256)||(4339776-4340033)
chr6 (1-205)||(25927159-25927361)
chr6 (1-256)||(27737488-27737747)
chr6 (74-256)||(19244687-19244875)
chr6 (4-256)||(21907476-21907734)
chr6 (1-201)||(22566019-22566220)
chr6 (4-256)||(22567884-22568137)
chr6 (108-183)||(1635110-1635185)
chr6 (97-252)||(9898766-9898922)
chr6 (4-201)||(12183188-12183386)
chr6 (100-174)||(22813605-22813680)
chr6 (99-201)||(24475194-24475298)
chr6 (92-254)||(6630492-6630659)
chr6 (1-61)||(9516826-9516886)
chr6 (99-256)||(24215615-24215773)
chr6 (102-181)||(27124372-27124452)
chr6 (21-167)||(8039028-8039177)
chr6 (1-60)||(17827091-17827150)
chr6 (74-256)||(9838470-9838654)
chr6 (1-58)||(9726063-9726120)
chr6 (99-256)||(21672234-21672394)
chr6 (99-256)||(21679650-21679810)
chr6 (5-61)||(23231981-23232037)
chr6 (99-193)||(23844330-23844425)
chr6 (103-181)||(24657346-24657425)
chr6 (99-256)||(14079256-14079419)
chr6 (1-61)||(23844463-23844523)
chr6 (103-210)||(2586861-2586967)
chr6 (1-52)||(17729193-17729244)
chr6 (1-60)||(22410326-22410385)
chr6 (99-157)||(25781916-25781975)
chr6 (1-87)||(17299804-17299889)
chr6 (1-59)||(21688795-21688853)
chr6 (1-59)||(23143763-23143821)
chr6 (99-183)||(5624779-5624864)
chr6 (99-181)||(11136034-11136119)
chr6 (106-166)||(17382214-17382275)
chr6 (135-180)||(18075289-18075334)
chr6 (161-209)||(7542807-7542854)
chr6 (1-141)||(11176991-11177131)
chr6 (1-60)||(21672434-21672493)
chr6 (1-60)||(21679850-21679909)
chr6 (193-253)||(21688654-21688715)
chr6 (22-61)||(25781852-25781891)
chr6 (99-180)||(17826974-17827056)
chr6 (99-180)||(22412940-22413022)
chr6 (6-64)||(27124487-27124545)
chr6 (222-262)||(14637120-14637160)
chr6 (120-175)||(17883725-17883781)
chr6 (99-181)||(20005795-20005879)
chr6 (99-146)||(21841612-21841660)
[»] chr7 (82 HSPs)
chr7 (1-256)||(3734637-3734895)
chr7 (1-206)||(18662482-18662685)
chr7 (1-214)||(31492971-31493179)
chr7 (97-257)||(7397278-7397441)
chr7 (1-287)||(6013634-6013921)
chr7 (1-286)||(17152920-17153212)
chr7 (1-257)||(7318314-7318574)
chr7 (74-232)||(8313217-8313377)
chr7 (77-255)||(17829686-17829866)
chr7 (74-266)||(9574521-9574715)
chr7 (20-256)||(8293842-8294079)
chr7 (1-111)||(17203064-17203174)
chr7 (1-181)||(18368856-18369038)
chr7 (105-255)||(4785985-4786140)
chr7 (20-152)||(10648638-10648770)
chr7 (4-158)||(14195873-14196028)
chr7 (97-245)||(10586834-10586986)
chr7 (1-256)||(16365746-16366007)
chr7 (99-183)||(1848103-1848188)
chr7 (92-256)||(3190860-3191026)
chr7 (97-201)||(140253-140357)
chr7 (97-250)||(6006076-6006228)
chr7 (102-255)||(5108706-5108864)
chr7 (1-161)||(7492160-7492321)
chr7 (1-60)||(9731626-9731685)
chr7 (99-181)||(13418660-13418743)
chr7 (97-253)||(1587819-1587975)
chr7 (1-173)||(3329542-3329716)
chr7 (78-252)||(16297644-16297815)
chr7 (1-61)||(11803121-11803181)
chr7 (1-61)||(13759858-13759918)
chr7 (99-181)||(20582394-20582477)
chr7 (108-256)||(21501413-21501562)
chr7 (194-253)||(1584435-1584496)
chr7 (1-83)||(9916607-9916689)
chr7 (1-83)||(9924519-9924601)
chr7 (1-58)||(2563858-2563915)
chr7 (1-173)||(11221051-11221222)
chr7 (1-285)||(39272945-39273233)
chr7 (74-158)||(1584346-1584428)
chr7 (99-181)||(8877559-8877643)
chr7 (1-80)||(9500485-9500563)
chr7 (99-181)||(13277630-13277713)
chr7 (1-43)||(5108606-5108648)
chr7 (1-256)||(8978804-8979064)
chr7 (1-67)||(9864318-9864384)
chr7 (185-256)||(4986818-4986893)
chr7 (185-256)||(4990916-4990991)
chr7 (106-181)||(8053940-8054016)
chr7 (1-61)||(17077169-17077229)
chr7 (1-244)||(4579138-4579383)
chr7 (125-255)||(4819004-4819141)
chr7 (1-60)||(12329723-12329782)
chr7 (1-60)||(13418575-13418634)
chr7 (99-157)||(19153434-19153493)
chr7 (99-157)||(20752833-20752892)
chr7 (4-58)||(22339312-22339366)
chr7 (4-61)||(1848225-1848282)
chr7 (165-241)||(4986736-4986816)
chr7 (165-241)||(4990834-4990914)
chr7 (99-212)||(6042589-6042703)
chr7 (97-256)||(15869732-15869895)
chr7 (99-167)||(17077254-17077323)
chr7 (6-67)||(18449288-18449349)
chr7 (3-59)||(1584586-1584642)
chr7 (102-158)||(2350647-2350703)
chr7 (2-58)||(6005878-6005934)
chr7 (1-61)||(8054487-8054547)
chr7 (1-61)||(16059019-16059079)
chr7 (1-60)||(6042501-6042560)
chr7 (99-181)||(9131049-9131132)
chr7 (162-205)||(10339544-10339587)
chr7 (99-254)||(2563956-2564116)
chr7 (217-255)||(8877684-8877722)
chr7 (1-43)||(23099968-23100010)
chr7 (163-212)||(19398658-19398707)
chr7 (169-256)||(2350510-2350601)
chr7 (11-59)||(3191059-3191107)
chr7 (2-58)||(9245223-9245279)
chr7 (1-61)||(13277544-13277604)
chr7 (217-257)||(13277755-13277795)
chr7 (218-266)||(13418786-13418834)
[»] chr4 (47 HSPs)
chr4 (4-301)||(25120984-25121281)
chr4 (74-312)||(19374558-19374797)
chr4 (1-151)||(21323784-21323933)
chr4 (74-257)||(19092409-19092595)
chr4 (1-177)||(17672043-17672219)
chr4 (28-256)||(5679273-5679505)
chr4 (4-210)||(26115755-26115959)
chr4 (74-252)||(14649008-14649190)
chr4 (1-213)||(13908895-13909110)
chr4 (1-146)||(12578179-12578324)
chr4 (74-166)||(17951189-17951281)
chr4 (2-158)||(15164809-15164964)
chr4 (1-256)||(7582338-7582598)
chr4 (1-256)||(17336933-17337193)
chr4 (74-163)||(17955044-17955133)
chr4 (1-61)||(16730397-16730457)
chr4 (1-61)||(19492698-19492758)
chr4 (106-181)||(12761390-12761465)
chr4 (1-60)||(13128873-13128932)
chr4 (1-123)||(11490573-11490694)
chr4 (99-167)||(17216958-17217027)
chr4 (1-58)||(19882681-19882738)
chr4 (131-243)||(22173367-22173482)
chr4 (99-256)||(11520995-11521153)
chr4 (99-256)||(19492510-19492673)
chr4 (74-256)||(19929473-19929660)
chr4 (92-286)||(22357301-22357499)
chr4 (106-212)||(24639306-24639415)
chr4 (1-58)||(20315041-20315098)
chr4 (1-61)||(13692667-13692727)
chr4 (216-256)||(17106852-17106892)
chr4 (1-61)||(17216858-17216918)
chr4 (99-181)||(25094692-25094776)
chr4 (99-181)||(25097959-25098043)
chr4 (1-84)||(9052714-9052796)
chr4 (103-181)||(17709896-17709975)
chr4 (125-217)||(23644939-23645034)
chr4 (161-211)||(23080530-23080579)
chr4 (98-181)||(19562052-19562137)
chr4 (3-59)||(11933461-11933517)
chr4 (160-216)||(30600037-30600093)
chr4 (161-212)||(9052875-9052926)
chr4 (1-56)||(13992879-13992934)
chr4 (21-59)||(8969722-8969760)
chr4 (1-59)||(19636586-19636644)
chr4 (10-60)||(40227825-40227875)
chr4 (99-181)||(17026221-17026305)
[»] chr2 (47 HSPs)
chr2 (74-257)||(32085577-32085762)
chr2 (5-256)||(17889981-17890235)
chr2 (98-217)||(23933388-23933506)
chr2 (1-256)||(20174438-20174693)
chr2 (4-256)||(25885261-25885515)
chr2 (1-212)||(45621729-45621939)
chr2 (99-255)||(27908918-27909079)
chr2 (1-253)||(17743278-17743534)
chr2 (99-205)||(45553268-45553372)
chr2 (99-212)||(26603205-26603320)
chr2 (1-256)||(29719031-29719289)
chr2 (74-254)||(29027610-29027794)
chr2 (99-256)||(25887702-25887864)
chr2 (99-181)||(29143088-29143171)
chr2 (99-181)||(28925660-28925743)
chr2 (1-59)||(17349397-17349455)
chr2 (1-212)||(21078473-21078684)
chr2 (99-166)||(25618694-25618762)
chr2 (99-256)||(17675427-17675589)
chr2 (99-181)||(25530574-25530657)
chr2 (99-254)||(30411805-30411965)
chr2 (99-212)||(11382600-11382713)
chr2 (75-167)||(23011655-23011746)
chr2 (1-61)||(25920307-25920367)
chr2 (1-60)||(9774334-9774393)
chr2 (1-60)||(12953293-12953352)
chr2 (99-254)||(17349486-17349648)
chr2 (1-60)||(25618597-25618656)
chr2 (4-58)||(5777260-5777314)
chr2 (99-168)||(9774151-9774221)
chr2 (1-55)||(15339279-15339333)
chr2 (103-175)||(25196153-25196226)
chr2 (99-146)||(17635687-17635735)
chr2 (3-59)||(19200135-19200191)
chr2 (1-61)||(24090924-24090984)
chr2 (1-61)||(25535315-25535375)
chr2 (99-181)||(25920391-25920475)
chr2 (4-84)||(25939201-25939280)
chr2 (1-61)||(30411719-30411779)
chr2 (1-60)||(25196051-25196110)
chr2 (99-256)||(31804705-31804860)
chr2 (1-59)||(28606178-28606236)
chr2 (3-59)||(13776381-13776437)
chr2 (1-61)||(26603348-26603408)
chr2 (1-61)||(26667359-26667419)
chr2 (1-61)||(27909117-27909177)
chr2 (1-61)||(29143002-29143062)
[»] chr1 (61 HSPs)
chr1 (74-256)||(18100813-18100998)
chr1 (74-256)||(15807820-15808005)
chr1 (74-256)||(28008219-28008404)
chr1 (75-256)||(12012614-12012797)
chr1 (1-181)||(22620303-22620484)
chr1 (74-256)||(17121302-17121486)
chr1 (24-255)||(16359934-16360168)
chr1 (74-256)||(33190791-33190975)
chr1 (74-256)||(24281391-24281573)
chr1 (21-181)||(32382886-32383047)
chr1 (98-257)||(22664345-22664508)
chr1 (129-256)||(25960966-25961094)
chr1 (1-256)||(9401546-9401806)
chr1 (99-183)||(29242645-29242730)
chr1 (99-256)||(31235847-31236010)
chr1 (99-256)||(17359299-17359462)
chr1 (99-181)||(18825782-18825865)
chr1 (102-253)||(21449218-21449375)
chr1 (1-283)||(17610027-17610314)
chr1 (127-256)||(24214705-24214832)
chr1 (1-152)||(16787634-16787784)
chr1 (103-180)||(16069440-16069518)
chr1 (4-61)||(25405628-25405685)
chr1 (1-155)||(51473780-51473934)
chr1 (1-61)||(12208642-12208702)
chr1 (1-256)||(13345136-13345394)
chr1 (193-254)||(21847814-21847877)
chr1 (1-61)||(29242560-29242620)
chr1 (99-198)||(34481108-34481207)
chr1 (1-60)||(21666607-21666666)
chr1 (105-193)||(12208746-12208835)
chr1 (3-60)||(17359205-17359262)
chr1 (1-122)||(21847674-21847795)
chr1 (1-61)||(16179048-16179108)
chr1 (1-61)||(21449130-21449190)
chr1 (130-248)||(15813350-15813471)
chr1 (1-60)||(16916932-16916991)
chr1 (103-181)||(21666486-21666565)
chr1 (92-181)||(9787756-9787846)
chr1 (99-201)||(15813012-15813116)
chr1 (222-256)||(16112086-16112120)
chr1 (102-167)||(18529083-18529149)
chr1 (101-199)||(21973065-21973164)
chr1 (1-58)||(3591654-3591711)
chr1 (1-58)||(17837558-17837615)
chr1 (105-181)||(21334595-21334672)
chr1 (99-175)||(22623029-22623106)
chr1 (1-61)||(14779606-14779666)
chr1 (99-173)||(16179144-16179220)
chr1 (99-181)||(16916823-16916907)
chr1 (5-61)||(18736238-18736294)
chr1 (3-59)||(23038012-23038068)
chr1 (1-60)||(15543965-15544024)
chr1 (1-60)||(15813523-15813582)
chr1 (99-180)||(21987872-21987955)
chr1 (6-59)||(15813155-15813208)
chr1 (99-158)||(14779704-14779764)
chr1 (99-181)||(15543844-15543928)
chr1 (21-61)||(21987980-21988020)
chr1 (220-256)||(22623157-22623193)
chr1 (3-39)||(44795411-44795447)
[»] scaffold0622 (1 HSPs)
scaffold0622 (1-266)||(769-1036)
[»] chr8 (36 HSPs)
chr8 (1-256)||(34497156-34497414)
chr8 (74-248)||(25182234-25182413)
chr8 (1-256)||(14528190-14528438)
chr8 (1-256)||(30121955-30122213)
chr8 (20-212)||(9641937-9642129)
chr8 (1-216)||(13697896-13698111)
chr8 (97-253)||(7983718-7983875)
chr8 (99-256)||(18448340-18448502)
chr8 (1-256)||(24644878-24645138)
chr8 (114-256)||(26394498-26394644)
chr8 (99-256)||(24114082-24114244)
chr8 (99-181)||(23893091-23893174)
chr8 (99-256)||(24269735-24269897)
chr8 (1-175)||(44010907-44011082)
chr8 (99-253)||(13314795-13314953)
chr8 (92-256)||(19786863-19787032)
chr8 (99-183)||(18569193-18569278)
chr8 (1-61)||(17101891-17101951)
chr8 (1-61)||(27659486-27659546)
chr8 (1-61)||(29382359-29382419)
chr8 (106-256)||(24110468-24110623)
chr8 (1-61)||(24114280-24114340)
chr8 (1-61)||(24269638-24269698)
chr8 (4-59)||(13314992-13315047)
chr8 (13-181)||(30806379-30806538)
chr8 (1-59)||(2637639-2637697)
chr8 (99-175)||(29382244-29382322)
chr8 (161-210)||(15238998-15239047)
chr8 (1-57)||(15238840-15238896)
chr8 (1-61)||(16403953-16404013)
chr8 (99-181)||(16404039-16404122)
chr8 (1-60)||(18448541-18448600)
chr8 (5-60)||(21314668-21314723)
chr8 (1-58)||(5850982-5851039)
chr8 (1-58)||(14075635-14075692)
chr8 (3-59)||(6885000-6885056)
[»] scaffold0043 (1 HSPs)
scaffold0043 (1-256)||(89655-89912)
[»] chr3 (54 HSPs)
chr3 (1-256)||(21825670-21825927)
chr3 (97-301)||(31285772-31285977)
chr3 (4-256)||(21325384-21325638)
chr3 (1-256)||(21303154-21303412)
chr3 (23-299)||(18736432-18736708)
chr3 (1-240)||(8445863-8446102)
chr3 (98-256)||(17155930-17156089)
chr3 (74-252)||(41508480-41508662)
chr3 (1-256)||(12805693-12805948)
chr3 (74-235)||(2723658-2723820)
chr3 (99-212)||(2167463-2167577)
chr3 (113-256)||(8143767-8143911)
chr3 (1-256)||(16245529-16245787)
chr3 (105-256)||(8267076-8267231)
chr3 (1-158)||(10744943-10745099)
chr3 (99-256)||(17438229-17438391)
chr3 (99-181)||(4650364-4650447)
chr3 (119-256)||(8319204-8319346)
chr3 (99-181)||(8765244-8765327)
chr3 (99-181)||(8770146-8770229)
chr3 (100-181)||(20023430-20023512)
chr3 (1-61)||(17438429-17438489)
chr3 (1-61)||(21301959-21302019)
chr3 (1-60)||(19925622-19925681)
chr3 (1-60)||(20429751-20429810)
chr3 (138-256)||(19171662-19171787)
chr3 (3-59)||(3116419-3116475)
chr3 (99-181)||(16229831-16229915)
chr3 (102-180)||(932884-932963)
chr3 (99-157)||(3116321-3116380)
chr3 (1-60)||(12411192-12411251)
chr3 (102-175)||(27413780-27413855)
chr3 (162-212)||(821361-821411)
chr3 (4-57)||(4650275-4650328)
chr3 (138-255)||(7494915-7495035)
chr3 (102-181)||(12754800-12754881)
chr3 (222-255)||(38083822-38083855)
chr3 (103-181)||(8170013-8170093)
chr3 (1-61)||(22349450-22349510)
chr3 (18-61)||(19171832-19171875)
chr3 (106-175)||(19925505-19925576)
chr3 (1-68)||(28728985-28729052)
chr3 (6-60)||(7478334-7478388)
chr3 (164-202)||(8556987-8557025)
chr3 (97-181)||(19908443-19908529)
chr3 (222-256)||(20429966-20430000)
chr3 (3-60)||(7495094-7495151)
chr3 (1-58)||(8557130-8557187)
chr3 (99-174)||(19576105-19576182)
chr3 (11-59)||(5508386-5508434)
chr3 (1-61)||(8889150-8889210)
chr3 (1-61)||(19167452-19167512)
chr3 (4-60)||(19908351-19908407)
chr3 (99-181)||(19909850-19909934)
[»] scaffold0427 (1 HSPs)
scaffold0427 (3-256)||(2618-2874)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-253)||(35578-35834)
[»] scaffold0638 (2 HSPs)
scaffold0638 (97-254)||(622-785)
scaffold0638 (1-60)||(822-881)
[»] scaffold0005 (1 HSPs)
scaffold0005 (74-252)||(168102-168284)
[»] scaffold0155 (2 HSPs)
scaffold0155 (99-243)||(35806-35954)
scaffold0155 (1-59)||(35995-36053)
[»] scaffold0062 (1 HSPs)
scaffold0062 (4-240)||(43042-43282)
[»] scaffold0671 (2 HSPs)
scaffold0671 (99-181)||(569-652)
scaffold0671 (1-61)||(483-543)
[»] scaffold0035 (2 HSPs)
scaffold0035 (4-61)||(69957-70014)
scaffold0035 (99-175)||(70050-70128)
[»] scaffold0957 (1 HSPs)
scaffold0957 (99-212)||(3283-3398)
[»] scaffold0238 (1 HSPs)
scaffold0238 (161-216)||(19311-19366)
[»] scaffold0351 (2 HSPs)
scaffold0351 (92-181)||(5641-5731)
scaffold0351 (92-181)||(151-241)
[»] scaffold0056 (2 HSPs)
scaffold0056 (99-175)||(25113-25190)
scaffold0056 (99-181)||(21403-21486)
[»] scaffold0008 (1 HSPs)
scaffold0008 (74-256)||(54975-55161)
[»] scaffold0263 (1 HSPs)
scaffold0263 (99-181)||(15785-15868)
[»] scaffold0006 (1 HSPs)
scaffold0006 (161-216)||(222876-222931)
[»] scaffold0650 (1 HSPs)
scaffold0650 (4-58)||(6331-6385)
[»] scaffold0048 (1 HSPs)
scaffold0048 (7-84)||(78641-78717)
[»] scaffold0016 (1 HSPs)
scaffold0016 (1-61)||(3572-3632)
[»] scaffold0002 (1 HSPs)
scaffold0002 (92-181)||(114620-114710)
[»] scaffold0653 (1 HSPs)
scaffold0653 (2-58)||(4484-4540)
[»] scaffold0386 (1 HSPs)
scaffold0386 (99-181)||(5982-6066)
[»] scaffold0034 (1 HSPs)
scaffold0034 (99-181)||(76542-76626)


Alignment Details
Target: chr5 (Bit Score: 294; Significance: 1e-165; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 1 - 326
Target Start/End: Original strand, 36175174 - 36175499
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||    
T  36175174 tagagtatcgtatccataaggattgtcgtttcgtccaaacaacatgcgttacttatttttgaacaattaaaataaataaaagagttgagggttagagatt 36175273  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36175274 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 36175373  T
Q  201 aattaaataacattcatcacatttagttatcttaagtagactatacaagtgatgagaacattgagatttatctaacctagtcggtttgttgagttgcacc 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36175374 aattaaataacattcatcacatttagttatcttaagtagactatacatgtgatgagaacattgagatttatctaacctagtcggtttgttgagttgcacc 36175473  T
Q  301 tactaatcgcactatgatcctgatgt 326  Q
    | ||||||||||||||||||| ||||    
T  36175474 tgctaatcgcactatgatccttatgt 36175499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 201
Target Start/End: Original strand, 24260560 - 24260757
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt-gc 102  Q
    ||||||||||||| |||||||||| ||||||||||| ||| ||||||||||||||||| ||||| |||| ||  ||||||||||||| |||| |||| ||    
T  24260560 agtatcgtatccacaaggattgtcatttcgtccaaaaaatccgcgttacttatttttggacaat-aaaataatcaaaagagttgagggttagagatttgc 24260658  T
Q  103 aatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgga 201  Q
    ||||||||||||||| ||||| |||||||||||| ||||||||| ||||| || || |||||||||||||| ||||||| |  ||||| ||||||||||    
T  24260659 aatttttatctgtttgcaacagagcaagttacctattttggttgcagaaatgttaggagcggttatgattccttgaatcccctctattcatttgttgga 24260757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26120905 - 26121120
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||||||| ||| || ||||||||||||||||||||||||||  || ||||||||||||||||||| |||  ||||||||||||||||| ||||  |||    
T  26120905 tagagtatcatattcaaaaggattgtcgtttcgtccaaacaattagcattacttatttttgaacaataaaataaaataaaagagttgagggttagatatt 26121004  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 200  Q
      ||||||||||||||| || || || ||| |||||||||| |||| ||||| ||||| || |||||  |||||| ||||| | |||||| |||||||||    
T  26121005 ttaatttttatctgtttgcagcatagaaagatacctgtttt-gttgcagaaatgtaagcagtggttagaattcttcgaatcacccctattaatttgttgg 26121103  T
Q  201 aattaaataacattcat 217  Q
    |||||||||||||||||    
T  26121104 aattaaataacattcat 26121120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 22755562 - 22755821
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||||||||||||||||||| ||||||||||  || ||| ||||||| |    |  | |  ||||||||||||| ||| |||| ||||    
T  22755562 tagagtatcgtatccataaggattgtcgtttcttccaaacaattggcattatttattttagttttacgatataaaataaaagagttaagggttagagatt 22755661  T
Q  101 g-caatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttg 199  Q
      |||||||||||||||| ||||| ||||||||||  |||||||||  | ||||||||  | || ||||||||||| ||||  | ||||||||||| |||    
T  22755662 tacaatttttatctgtttgcaacagagcaagttactagttttggttccaaaaaagtaatcaacgattatgattcttagaattccccctatttatttcttg 22755761  T
Q  200 ga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || |||||||||||||||  |||  |||| ||||||||||||||||||||||||||||||    
T  22755762 gatattaaataacattcatgtcatgtttatttatcttaagtagactatacaagtgatgag 22755821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 20744630 - 20744469
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||| ||||||| ||||| | ||| ||||| |||    
T  20744630 ttgcaatttttatctgtttgcaacatagcaagtttacctgttttggttgtagaaaagtaagcagcggttaggattcttcgaatcccacctgtttatattg 20744531  T
Q  197 ttgga-attaaataacat-tcatcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || || |||||||||||| |  || | |||| |||||||| ||||| |||||||||||||||    
T  20744530 tttgatattaaataacatattgtcgcttttatttatcttaggtagattatacaagtgatgag 20744469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 24267013 - 24266758
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt---tgaacaattaaaacaaataaaagagttgaggcttaggg 97  Q
    |||||||||||||||| ||||||| || ||| ||||||||||| || ||||||||||||   |  || ||  ||   |||||||||||| ||| ||||      
T  24267013 tagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttattttgttttgacgatataat--aataaaagagttaagggttagat 24266916  T
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttg 196  Q
    ||||||||||||||||||||  |||||||||||  ||||| |||||||  || |||||||| |||||||| || |||| |||||   |||||||| ||||    
T  24266915 attgcaatttttatctgtttgtaacaaagcaag--acctg-tttggttacag-aaagtaagcagcggttaggactcttcgaatcctccctatttattttg 24266820  T
Q  197 ttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
     ||||||||||| |||||||  |||  |||||||||||||||||||||||| ||||||||||    
T  24266819 atggaattaaatgacattcatgtcatgtttagttatcttaagtagactatataagtgatgag 24266758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 24343644 - 24343389
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt---tgaacaattaaaacaaataaaagagttgaggcttaggg 97  Q
    |||||||||||||||| ||||||| || ||| ||||||||||| || ||||||||||||   |  || ||  ||   |||||||||||| ||| ||||      
T  24343644 tagagtatcgtatccacaaggattatcattttgtccaaacaattcgtgttacttattttgttttgacgatataat--aataaaagagttaagggttagat 24343547  T
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttg 196  Q
    ||||||||||||||||||||  |||||||||||  ||||| |||||||  || |||||||| |||||||| || |||| |||||   |||||||| ||||    
T  24343546 attgcaatttttatctgtttgtaacaaagcaag--acctg-tttggttacag-aaagtaagcagcggttaggactcttcgaatcctccctatttattttg 24343451  T
Q  197 ttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
     ||||||||||| |||||||  |||  |||||||||||||||||||||||| ||||||||||    
T  24343450 atggaattaaatgacattcatgtcatgtttagttatcttaagtagactatataagtgatgag 24343389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 17171611 - 17171467
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||| |||||||||| | |||||||||||||||| || |||| ||||||| |||||||  |||||  | || ||||||||||||||||| |||| ||||    
T  17171611 tagagcatcgtatccacatggattgtcgtttcgtctaagcaattcgcgttaattattttaaaacaaa-ataataaataaaagagttgagggttagagatt 17171513  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttg 146  Q
    |||||||||||||  || ||||| ||||||||||||| ||||||||    
T  17171512 gcaatttttatctagttgcaacagagcaagttacctgctttggttg 17171467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 24265436 - 24265271
Alignment:
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttg 196  Q
    |||||||||||||||||||| ||| ||||||||||||||  ||| |||| ||||||||||| |||||||| || | |||||||  | |||||||| ||||    
T  24265436 attgcaatttttatctgtttgcaataaagcaagttaccttatttagttgcagaaaagtaagcagcggttaggactatttgaattccccctatttactttg 24265337  T
Q  197 ttggaattaaataacattca--tcacatttagt----tatcttaagtagactatacaagtgatgag 256  Q
    ||||| |||||||||| |||  |||||| ||||     ||||||||||||||||||||||||||||    
T  24265336 ttggatttaaataacagtcatgtcacatatagtaatcaatcttaagtagactatacaagtgatgag 24265271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 98 - 256
Target Start/End: Complemental strand, 24342067 - 24341902
Alignment:
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttg 196  Q
    |||||||||||||||||||| ||| ||||||||||||||  ||| |||| ||||||||||| |||||||| || | |||||||  | |||||||| ||||    
T  24342067 attgcaatttttatctgtttgcaataaagcaagttaccttatttagttgcagaaaagtaagcagcggttaggactatttgaattccccctatttactttg 24341968  T
Q  197 ttggaattaaataacattca--tcacatttagt----tatcttaagtagactatacaagtgatgag 256  Q
    ||||| |||||||||| |||  |||||| ||||     ||||||||||||||||||||||||||||    
T  24341967 ttggatttaaataacagtcatgtcacatatagtaatcaatcttaagtagactatacaagtgatgag 24341902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 18208307 - 18208054
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| | |||||||| ||||||||||||||| |  ||||||||||||      || | |  ||||||||||||| ||| || | | ||    
T  18208307 tagagtatcgtatccacatggattgtcctttcgtccaaacaattcatgttacttattttgttttgatgatataaaataaaagagttaagggttggaggtt 18208208  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttg 199  Q
    ||||||||||||||||| ||  | ||||||||||||| |||||||| ||||||||||| ||| ||||  | |||| ||||| | ||||| || |||||||    
T  18208207 gcaatttttatctgtttgcagtagagcaagttacctg-tttggttgcagaaaagtaagtagcagttacaactcttcgaatc-cccctatgtattttgttg 18208110  T
Q  200 gaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgat 253  Q
    |||||||||||||||||  || | |||| ||| | ||||| |||||||||||||||    
T  18208109 gaattaaataacattcatgtcgcgtttatttagcctaagttgactatacaagtgat 18208054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 34487678 - 34487930
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt---tgaacaattaaaacaaataaaagagttgaggcttaggg 97  Q
    |||| |||| |||||| | |||||||||||||||| ||||||| |||||||||||||||   |  || ||  ||   ||||||| || | ||| |||| |    
T  34487678 tagaatatcatatccacatggattgtcgtttcgtctaaacaattcgcgttacttattttgttttgacgatataat--aataaaaaagataagggttagag 34487775  T
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttg 196  Q
    |||||||||||||||||||||||||| ||||| |||| || |||||||| ||||||||    || ||||| || |||| ||||| | ||||| || ||||    
T  34487776 attgcaatttttatctgttttcaacagagcaatttacatg-tttggttgcagaaaagt---tagtggttaggactcttagaatc-cccctatctattttg 34487870  T
Q  197 ttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatg 254  Q
    | ||||||||||||||||||  |  | ||||||||||||||||||||||| |||||||||    
T  34487871 tcggaattaaataacattcatgttgcttttagttatcttaagtagactattcaagtgatg 34487930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 97 - 217
Target Start/End: Complemental strand, 26121286 - 26121165
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttattt 195  Q
    ||||| ||||||||||||||| ||| | ||||||||| || |||| ||||  ||||||||||| || ||||| ||||||||||||| | ||||||| |||    
T  26121286 gattgtaatttttatctgtttgcaagagagcaagttatctatttttggttacagaaaagtaagtagtggttaggattctttgaatcccccctatttcttt 26121187  T
Q  196 gttggaattaaataacattcat 217  Q
    |||||||||||  |||||||||    
T  26121186 gttggaattaatcaacattcat 26121165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24245602 - 24245542
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| |||||||||||||||||||||||||  |||||||||||||||||    
T  24245602 tagagtatcgtatccacaaggattgtcgtttcgtccaaacaactcgcgttacttatttttg 24245542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 103 - 256
Target Start/End: Original strand, 17432025 - 17432183
Alignment:
Q  103 aatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgttgg 200  Q
    ||||||| ||||||| ||||| |||||||| || ||||||||||| ||||||||||| |||||||| ||||||| ||||  |   | ||||| |||||||    
T  17432025 aatttttttctgtttgcaacagagcaagtttacttgttttggttgcagaaaagtaagcagcggttaggattcttcgaataccctatgtttatattgttgg 17432124  T
Q  201 a-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    | ||||||||||| | |  ||||||||| |||||||| ||||||||||||||| |||||    
T  17432125 atattaaataacagtaatgtcacatttatttatcttaggtagactatacaagtaatgag 17432183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 15690818 - 15691034
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaa--aacaaataaaagagttga-ggcttaggg 97  Q
    ||||||||||||||||  || ||||||||||||||||| |||| | ||||||||||||||    | || |  || ||||||||||||| | || |||| |    
T  15690818 tagagtatcgtatccacgagaattgtcgtttcgtccaaccaattctcgttacttattttt----agttgacaaataaataaaagagttaaagggttagag 15690913  T
Q  98 att-gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatt-t 195  Q
    ||| ||||||||||| ||||   |||| ||||| |||||||||||||||| ||||||||||| ||  |||| ||||||| ||||| | |||||||||| |    
T  15690914 atttgcaatttttatttgttcgtaacagagcaaattacctgttttggttgcagaaaagtaagcag-tgttaggattcttcgaatc-cccctatttattat 15691011  T
Q  196 gttgga-attaaataacattcat 217  Q
    |||||| ||||||||||| ||||    
T  15691012 gttggatattaaataacagtcat 15691034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 30 - 256
Target Start/End: Original strand, 17635349 - 17635575
Alignment:
Q  30 ttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagg-gatt-gcaatttttatctgttttcaacaaagc 127  Q
    |||||||||||||| || |||||||||||| ||||||   ||  | |||||||| |||| | ||| | |||| | ||||||||||||||| ||| | | |    
T  17635349 ttcgtccaaacaattcgtgttacttattttagaacaa---aataatataaaagatttgaaggttaagagatttgtaatttttatctgtttgcaatacaac 17635445  T
Q  128 aagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttggaattaaataacattca--tcacattta 225  Q
    |  |||||||||||||||| ||||| || ||  |||||||| |||||||||||| | || | | ||||||||||||||||||||| |||  |  | ||||    
T  17635446 atattacctgttttggttgcagaaatgttagccgcggttatcattctttgaatccccccca-tcatttgttggaattaaataacagtcaagttgcgttta 17635544  T
Q  226 gttatcttaagtagactatacaagtgatgag 256  Q
    |||||  ||||||||||||  ||||||||||    
T  17635545 gttattctaagtagactatctaagtgatgag 17635575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 16523764 - 16523680
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctgttttg-gttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| ||| || |||||||||||  ||| |||||||||||| |||||||| |||||||||||||    
T  16523764 ttgcaatttttatctgtttgcaacagagcgaatttacctgttttttgttatagaaaagtaagcagcggttaggattctttgaatc 16523680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 17315070 - 17314990
Alignment:
Q  102 caatttttatctgttttcaacaaagc-aagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||||||||| ||| ||| | ||| ||||||||||||||||||| | ||||||||| |||||||| |||||||||||||    
T  17315070 caatttttatctttttgcaatagagcgaagttacctgttttggttgcaaaaaagtaagcagcggttaagattctttgaatc 17314990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 20315390 - 20315307
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| |||||||||||| |||| ||||||||||| | || ||||||||||| ||| | ||||| |||||    
T  20315390 ttgcaatttttatctgtttgcaacaaagcaagtttacatgttttggttgcaaaatagtaagaagcgattagggttcttcgaatc 20315307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 24245499 - 24245421
Alignment:
Q  104 atttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||||| ||||| |||||||||||||| ||||||||| |||| ||||||||||| | |||||| ||||||| |||||    
T  24245499 atttttatttgtttccaacaaagcaagtttacctgttttagttgcagaaaagtaagcaacggttaggattcttcgaatc 24245421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 74 - 244
Target Start/End: Complemental strand, 24662161 - 24661989
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||| ||| |||| |||| |||||||||  |||||  |||| |||||||||| |||||| |||| || |||||||| |||||||| || ||    
T  24662161 aaataaaagagttaagggttagcgatttcaatttttagttgtttgaaacagagcaagttacttgtttt-gttgcagtaaagtaagtagcggttaagactc 24662063  T
Q  174 tttgaatctctcctattta-tttgttggaattaaataacattca--tcacatttagttatcttaagtagactat 244  Q
    || || || | | ||| || |||||||||| ||||||| |||||  |  | |||| ||||||||||||||||||    
T  24662062 ttcgattcccccatatatattttgttggaagtaaataagattcatgttgcgtttaattatcttaagtagactat 24661989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 101 - 181
Target Start/End: Original strand, 28664902 - 28664983
Alignment:
Q  101 gcaatttttatctgttttcaacaaagc-aagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||| ||||| ||| || |||||||||||||||| |||||| |||| | |||||| ||||||| |||||    
T  28664902 gcaatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaaataagcaacggttaagattcttcgaatc 28664983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 20564053 - 20563969
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| ||||| || || |||||| ||||| ||||||||||||||| |||| ||||||| |||||    
T  20564053 ttgcaatttttatctgtttgcaacagagcaaatttacttgtttttggttgcagaaaagtaagaagcagttaggattcttcgaatc 20563969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 157
Target Start/End: Original strand, 18937791 - 18937945
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggctt-agggattgc 102  Q
    |||||||||| || | ||||||| |||||||||||||||| | |||||||||||||     ||| | |  |||| |||||||| ||| || || |||| |    
T  18937791 agtatcgtattcagagggattgttgtttcgtccaaacaattcacgttacttattttaagttaatgatataaaat-aaagagttaagggttgagagatttc 18937889  T
Q  103 aatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaa 157  Q
    ||||||||||||||| ||||| |||||||||| || ||||||||| ||||| ||||    
T  18937890 aatttttatctgtttgcaacagagcaagttacatgtttttggttgcagaaatgtaa 18937945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 20315488 - 20315429
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| | ||||| || ||||||||||||||| ||||| ||||||||||    
T  20315488 tagagtatcgtatccacatggattatcctttcgtccaaacaattcgcgtaacttattttt 20315429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 61
Target Start/End: Complemental strand, 19004282 - 19004224
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||| | |||||||| ||| ||||||||||| | |||||||||||||||    
T  19004282 gagtatcgtatccacatggattgtcattttgtccaaacaattcacgttacttatttttg 19004224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 77 - 167
Target Start/End: Complemental strand, 19283837 - 19283748
Alignment:
Q  77 taaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggtta 167  Q
    |||||||||| ||| |||| |||| ||||||| |||| ||| ||| | || |||||||||| ||||||||||||||| |||| ||||||||    
T  19283837 taaaagagttaagggttagagattacaattttaatctatttgcaatagagaaagttacctg-tttggttgtagaaaattaagcagcggtta 19283748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 212
Target Start/End: Complemental strand, 17474605 - 17474493
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgtt 198  Q
    ||||||||||| ||||||| ||||| |  | |||| |||||||||||| | ||| || || |||||||| |||||||  |||| | || ||| |||||||    
T  17474605 ttgcaatttttttctgtttgcaacataataggttatctgttttggttgcaaaaatgttagcagcggttaggattcttataatc-ccccaattcatttgtt 17474507  T
Q  199 ggaattaaataaca 212  Q
    ||||||||||||||    
T  17474506 ggaattaaataaca 17474493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 60
Target Start/End: Original strand, 39434509 - 39434562
Alignment:
Q  7 atcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||| | |||||||| ||| ||||||||||| ||||||||||||||||    
T  39434509 atcgtatccacatggattgtccttttgtccaaacaattcgcgttacttattttt 39434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 15375940 - 15375880
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||| |||||| | |||||||||||||||||||| |||  || |||||||||||||    
T  15375940 tagagtatcctatccacagggattgtcgtttcgtccaaaaaatttgcattacttatttttg 15375880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 20549762 - 20549702
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| |||||||| |||||| |  ||||||||||||||    
T  20549762 tagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttg 20549702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 20858814 - 20858886
Alignment:
Q  102 caatttttatctgttttcaacaaagc-aagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||| |||| ||||||||| || |||||| ||||||||| | ||||||||| |||||||| |||||    
T  20858814 caatttttatcggtttgcaacaaagcgaatttacctattttggttgcataaaagtaagcagcggttaggattc 20858886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23388896 - 23388836
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| |||||||| |||||| |  ||||||||||||||    
T  23388896 tagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttg 23388836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 24140483 - 24140542
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||| |||||||   |||||||| ||||||||||||||| |||||||| |||||||    
T  24140483 tagagtattgtatccactgggattgtcctttcgtccaaacaattcgcgttacatattttt 24140542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 175
Target Start/End: Original strand, 24140577 - 24140651
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctt 175  Q
    |||||||||||||| | | ||| |||||||| |||| ||||||||| ||||||||||| | |||||| |||||||    
T  24140577 caatttttatctgtgtgcgacagagcaagtttacctattttggttgcagaaaagtaagcaacggttaggattctt 24140651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 24852227 - 24852173
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    ||||||||||||| | ||||||| |||||||| ||||||| | ||||||||||||    
T  24852227 agtatcgtatccacatggattgttgtttcgtctaaacaattcacgttacttattt 24852173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25402395 - 25402337
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||| ||||||| | ||||||||||||||||| ||  || |||||||||||||||    
T  25402395 tagagtattgtatccacagggattgtcgtttcgtcctaatgattcgcgttacttatttt 25402337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25550562 - 25550504
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    ||||||||| |||||| | |||||||| ||||||||||||||| |  ||||||||||||    
T  25550562 tagagtatcatatccacagggattgtcatttcgtccaaacaattcttgttacttatttt 25550504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 131 - 181
Target Start/End: Original strand, 34128807 - 34128857
Alignment:
Q  131 ttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||||||||||||| ||||||||||| | |||||| ||||||| |||||    
T  34128807 ttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaatc 34128857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 256
Target Start/End: Complemental strand, 24167541 - 24167386
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgga 201  Q
    |||||||||||||||| |||||||  || |||| | |||| |||| ||||  || || ||| |||| ||||||||||||| |  ||||| |||||||| |    
T  24167541 caatttttatctgtttgcaacaaaataaattacttttttttgttgcagaat-gttagcagcagttaggattctttgaatccccactattcatttgttgaa 24167443  T
Q  202 attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||| ||||||| |||  || | || ||||||  ||||||||||||  ||||||||||    
T  24167442 attgaataacaatcaagtcgcgttaagttattctaagtagactatctaagtgatgag 24167386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 110 - 201
Target Start/End: Complemental strand, 24852121 - 24852030
Alignment:
Q  110 atctgttttcaacaaagcaa-gttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgga 201  Q
    |||||||| ||||| ||||| ||||||||||||||||||||||   || | || ||||| ||||||||||||| |  ||||| ||||||||||    
T  24852121 atctgtttgcaacagagcaaagttacctgttttggttgtagaatgata-gcagtggttaggattctttgaatcccctctattcatttgttgga 24852030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 28664815 - 28664875
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||||||| |||| ||| |||| |||||| | |||||| | |||||||||||||||    
T  28664815 tagagtatcgtattcatagggactgtcctttcgtgcgaacaattctcgttacttatttttg 28664875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 105; Significance: 2e-52; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 74 - 254
Target Start/End: Original strand, 39699 - 39882
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||| | ||  |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||||||| ||||||||||| ||    
T  39699 aaataaaagagataagaattagagattgcaatttttatctgtttgcaacagagcaagttacctgttttggttgcagaaaagtaagcagcggttatgactc 39798  T
Q  174 tttgaatctctcctattta-tttgttggaattaaataacattcatc--acatttagttatcttaagtagactatacaagtgatg 254  Q
    |||||||| | |||||||| ||||||||| |||||| |||||||||  || |||||||||||||||||||||||||||||||||    
T  39799 tttgaatcccccctatttattttgttggagttaaattacattcatcttacgtttagttatcttaagtagactatacaagtgatg 39882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 8e-52; HSPs: 56)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 23645825 - 23645614
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||||| ||||||||||||||||||||||||   ||||| ||||||||||||||| |||  ||||||||||||||||| |||| ||||    
T  23645825 tagagtatcgtatccatagggattgtcgtttcgtccaaacaattatcgttaattatttttgaacaataaaataaaataaaagagttgagggttagagatt 23645726  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 200  Q
    ||||||||||| ||||| ||||| |||||||||| ||||||||||| | ||||||||| || ||||| | |||||||||||    |||||||||| ||||    
T  23645725 gcaatttttatttgtttgcaacagagcaagttacatgttttggttgcataaaagtaagcagtggttaggcttctttgaatccgctctatttattttttgg 23645626  T
Q  201 aattaaataaca 212  Q
    | ||| ||||||    
T  23645625 atttacataaca 23645614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 8241389 - 8241571
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||| ||  |||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||||||||||||||| ||| |||| || |     
T  8241389 aaataaaagagttaagagttagagattgcaatttttatctgtttgcaacatagcaagttacctg-tttggttgtagaaaagtaagcagcagtta-gactt 8241486  T
Q  174 tttgaatctctcctattta-tttgttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||| | |||||||| ||||||||||||||||||||||||  || | |||| ||||||||||||||| ||||||||||||||    
T  8241487 tttgaatc-cccctatttattttgttggaattaaataacattcatgtcgcgtttatttatcttaagtagacaatacaagtgatgag 8241571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 28933718 - 28933458
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| ||||||| ||||||||||||||||||  | ||| ||||||||      || | |  ||||||||||| | ||| |||| ||||    
T  28933718 tagagtatcgtatccacaaggattatcgtttcgtccaaacaatttgtgttgcttattttaagttgatgatataaaataaaagagataagggttagagatt 28933619  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgtt-ttggttgtagaaaagtaagaagcggttatgattctttgaatctctcc-tattt-atttgt 197  Q
    ||||||||||||||||| ||||| |||||||||| |||| ||||||| | ||||| ||  |||||||| || |||||||||| | || ||||| ||||||    
T  28933618 gcaatttttatctgtttgcaacagagcaagttacttgttcttggttgca-aaaaggaaacagcggttaggactctttgaatccccccttatttaatttgt 28933520  T
Q  198 tgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||| |||||||||||||||  |||||||||||||| |||||||||||||||||||||||||    
T  28933519 tggatattaaataacattcatgtcacatttagttatattaagtagactatacaagtgatgag 28933458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 24252287 - 24252131
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| | |||||||||||| ||||||||||| |  |||||||||||||||||||| |||| ||||||||||| ||||| ||||  |||    
T  24252287 tagagtatcgtatccacatggattgtcgtttagtccaaacaattcttgttacttatttttgaacaat-aaaataaataaaagagatgagggttagatatt 24252189  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaag 158  Q
    | ||||||||||||||| ||||| |||||||| | ||||||||||| ||||| |||||    
T  24252188 gtaatttttatctgtttgcaacagagcaagtttcgtgttttggttgcagaaatgtaag 24252131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 15466410 - 15466664
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt---tgaacaattaaaacaaataaaagagttgaggcttaggg 97  Q
    |||||||||||||| ||| |||||||| ||||||| ||||||| ||||||| |||||||   | ||| ||  ||   |||||||||||| ||| |||| |    
T  15466410 tagagtatcgtatcaatagggattgtcatttcgtctaaacaattcgcgttagttattttgttttaacgatataat--aataaaagagttaagggttagag 15466507  T
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgt 197  Q
    ||||||| |||||||||||| ||||| ||||||||||||  |||||||| ||||||||||  ||||||||  | ||||  ||||   ||| | | |||||    
T  15466508 attgcaaattttatctgtttgcaacagagcaagttacct-atttggttgcagaaaagtaaacagcggttagaactcttcaaatc---cctctatctttgt 15466603  T
Q  198 tggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||||||||| |  |||| ||||||||||||||||||||||||||| |||||||    
T  15466604 tggaattaaataacatttatgtcacgtttagttatcttaagtagactatacaaatgatgag 15466664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 4339776 - 4340033
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||| ||||||| || ||||||||||| |||||| |||| ||| ||||||||||| |    |  | |  ||||||||||| | ||| |||| ||||    
T  4339776 tagagtattgtatccacaatgattgtcgttttgtccaaccaattcgcattacttattttagtttgacgatataaaataaaagagataagggttagagatt 4339875  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 200  Q
     |||| ||||| ||||| |||| ||||||||||||||||||||||| ||||||||||  |||||| | | ||| || ||||   ||||||||||||||||    
T  4339876 acaatatttatttgtttgcaactaagcaagttacctgttttggttgcagaaaagtaaccagcggtcagggttc-ttcaatcctccctatttatttgttgg 4339974  T
Q  201 a-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    | ||||||||||| |||  ||||||||| ||||||||| ||||||||| ||||||||||    
T  4339975 atattaaataacagtcatgtcacatttatttatcttaaatagactatataagtgatgag 4340033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 205
Target Start/End: Complemental strand, 25927361 - 25927159
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagg-gat 99  Q
    |||| ||||||||||| | ||||| | |||||||||||||||| | ||||||||||| |  |||||| |||   |||||||||||| ||| ||| | |||    
T  25927361 tagaatatcgtatccacatggattttagtttcgtccaaacaattcacgttacttattcta-aacaataaaat--aataaaagagtttagggttaagagat 25927265  T
Q  100 tgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttg 199  Q
    |||||||||||||||||| ||| | |||||||||||||||||||||  | ||| || || |||||||| ||||||||||||  | |||||| ||||||||    
T  25927264 tgcaatttttatctgtttgcaatagagcaagttacctgttttggtttcataaatgttagtagcggttaggattctttgaataccacctattcatttgttg 25927165  T
Q  200 gaatta 205  Q
     |||||    
T  25927164 aaatta 25927159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 27737747 - 27737488
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaa--aacaaataaaagagttgaggcttaggga 98  Q
    ||||||||| || ||| ||||||||| |||||||||||||||| ||||||||||||||||| | | || |  |  |||| |||||  | ||| |||| ||    
T  27737747 tagagtatcatacccacaaggattgttgtttcgtccaaacaattcgcgttacttatttttgta-agttgacgataaaatgaaaga--taagggttagaga 27737651  T
Q  99 -ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
     ||||||||||||||||||| ||||| |||||||| ||||||||| |||| | ||||||||| |||||||| ||||||| ||||| ||||  ||||| ||    
T  27737650 gttgcaatttttatctgtttgcaacagagcaagtttacctgtttttgttgcaaaaaagtaagcagcggttaggattcttcgaatc-ctccattttatatt 27737552  T
Q  196 gttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
     ||||| ||||||||||| | |  ||||||| | |||||||| |||||||||||||||||||||    
T  27737551 attggatattaaataacagtaatgtcacattcatttatcttacgtagactatacaagtgatgag 27737488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 19244687 - 19244875
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaattttt-atctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgatt 172  Q
    ||||||||||| ||||| |||| ||||||| ||||| | |||||| ||||| ||||||||||||| |||||||||||||||||||| || ||| | ||||    
T  19244687 aaataaaagagatgagggttagagattgcactttttgaactgtttgcaacagagcaagttacctggtttggttgtagaaaagtaagtagtggtaaggatt 19244786  T
Q  173 ctttgaat-ctctcctatttattt-gttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||| | | | ||||| ||| |||  | |||||||||||||||  |||  |||||||||||||||| || |||||||||||||||    
T  19244787 ctttgaatgcccccatatttgtttcgttaaatattaaataacattcacgtcatgtttagttatcttaagttgagtatacaagtgatgag 19244875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 4 - 256
Target Start/End: Original strand, 21907476 - 21907734
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggattgc- 102  Q
    ||||||||||||| |||||||||||||||||||||| ||  ||||||||||| |||      || | |  ||||||||||| | ||| ||||  ||| |     
T  21907476 agtatcgtatccacaaggattgtcgtttcgtccaaaaaagtcgcgttacttaatttaagttgatgatataaaataaaagagataagggttagaaattaca 21907575  T
Q  103 -aatttttatctgttttcaacaaagcaagttacct-gttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttg 199  Q
     ||||||||||||||| ||||| ||||||||| ||  ||||||||| | ||||| ||  |||||||| || |||||||||| | | |||||| |||||||    
T  21907576 taatttttatctgtttgcaacagagcaagttagctatttttggttgcaaaaaaggaaacagcggttacgactctttgaatc-cccttatttactttgttg 21907674  T
Q  200 ga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || |||||||||||||||  ||   |||||||||||||||||||||||||||||||||||    
T  21907675 gatattaaataacattcatgtcgtgtttagttatcttaagtagactatacaagtgatgag 21907734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 201
Target Start/End: Complemental strand, 22566220 - 22566019
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt-tgaacaattaaaacaaataaaagagttgag-gcttaggga 98  Q
    ||||||||| |||||| ||| ||||||| |||||| || |||| ||||||||||||||  | |||||  || | |||| ||||||||||| | | |  ||    
T  22566220 tagagtatcatatccacaagaattgtcgcttcgtctaagcaattcgcgttacttatttggttaacaa--aatataaattaaagagttgagagataataga 22566123  T
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttgg-ttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgt 197  Q
    ||||||||||||||||||| |||||   |||||||||| |||| | ||||||||||||||| |||||||| |||| ||||||||||  ||||| ||||||    
T  22566122 ttgcaatttttatctgtttgcaacactacaagttacctatttttgattgtagaaaagtaagcagcggttaggattttttgaatctcctctattcatttgt 22566023  T
Q  198 tgga 201  Q
    ||||    
T  22566022 tgga 22566019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 4 - 256
Target Start/End: Original strand, 22567884 - 22568137
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggattgca 103  Q
    ||||| ||||||| | ||||||| |||||||||||||||  | |||||||||||||     ||  | |  ||||||||| ||| ||| |||| ||||| |    
T  22567884 agtattgtatccacatggattgtggtttcgtccaaacaactcacgttacttattttaagttaacgatataaaataaaagggttaagggttagagattgta 22567983  T
Q  104 atttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattt-atttgttggaa 202  Q
    ||||| |||||||| ||||| ||  ||||||||  |||||||| ||||||||||| | |||| |||| |||||||||  | |||||||  |||||||||     
T  22567984 atttt-atctgtttgcaacagagtcagttacctagtttggttgcagaaaagtaagcaacggtaatgactctttgaat-acccctatttgttttgttggat 22568081  T
Q  203 ttaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||||||| |  |  ||||||||||||||||||||| |||||||||||||||    
T  22568082 ttaaataacatttatgttgcatttagttatcttaagtagaatatacaagtgatgag 22568137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 1635110 - 1635185
Alignment:
Q  108 ttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctc 183  Q
    |||||||||| |||||||||||||||| ||||||||||||||||||||||  |||||||| ||||||| |||||||    
T  1635110 ttatctgtttgcaacaaagcaagttacatgttttggttgtagaaaagtaaacagcggttaggattcttcgaatctc 1635185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 97 - 252
Target Start/End: Complemental strand, 9898922 - 9898766
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttattt- 195  Q
    ||||||||||||||||||||| |||  || |||||||||| ||||||||| |||||||||| | |||||||  | | || ||||  | ||| |||||||     
T  9898922 gattgcaatttttatctgtttgcaaagaa-caagttacctattttggttgcagaaaagtaaca-gcggttacaactgttcgaattccccctgtttatttt 9898825  T
Q  196 gttggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtga 252  Q
    |||||| |||||||||||||||  | | |||||||||||||||||||||||||||||||    
T  9898824 gttggagttaaataacattcatgtcgcgtttagttatcttaagtagactatacaagtga 9898766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 4 - 201
Target Start/End: Complemental strand, 12183386 - 12183188
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgag-gcttagggattgc 102  Q
    ||||||||||||| | |||||||| |||||||| |||||| | |||||||||||||      |  | |  ||||||||||||| |  | |||| ||||||    
T  12183386 agtatcgtatccacatggattgtcatttcgtcctaacaattcacgttacttattttaaggtgacgatataaaataaaagagtttaaaggttagagattgc 12183287  T
Q  103 aatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgttgga 201  Q
    ||| ||||||||||| ||||| |||||||||||||||||||||  ||||||||||| | |||||| ||||||| ||||| | ||||||||| ||||||||    
T  12183286 aatgtttatctgtttgcaacatagcaagttacctgttttggttacagaaaagtaagcaacggttaggattcttcgaatc-cccctatttatattgttgga 12183188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 100 - 174
Target Start/End: Complemental strand, 22813680 - 22813605
Alignment:
Q  100 tgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattct 174  Q
    |||||||||||| ||||| |||||||||||||| |||||||||||||| ||||||||||| |||||||||||||||    
T  22813680 tgcaatttttatttgtttgcaacaaagcaagtttacctgttttggttgcagaaaagtaagtagcggttatgattct 22813605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 201
Target Start/End: Original strand, 24475194 - 24475298
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||| ||||||||||| ||||||| |||||| |||||||||||||| ||||||||||| || ||||| ||||||| ||||||| ||| ||||| |||    
T  24475194 ttgcaatctttatctgtttgcaacaaaacaagtttacctgttttggttgcagaaaagtaagtagtggttaggattcttcgaatctcccctgtttatattg 24475293  T
Q  197 ttgga 201  Q
    |||||    
T  24475294 ttgga 24475298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 92 - 254
Target Start/End: Complemental strand, 6630659 - 6630492
Alignment:
Q  92 ttagggattgcaatttttatctgtttt-caacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctat 189  Q
    |||| ||||||||||||||| | |||| ||||| ||||||||||||||||| ||||| | ||| | ||  |||||||| || |||||||||  | |||||    
T  6630659 ttagagattgcaatttttattttttttgcaacagagcaagttacctgtttttggttgcaaaaatggaaatagcggttaggactctttgaatacc-cctat 6630561  T
Q  190 ttat-ttgttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatg 254  Q
    |||| |||||||| | ||||||||||||||  | | ||| |||||||||||||||||||||||||||||    
T  6630560 ttatattgttggataataaataacattcatgtcgcgttttgttatcttaagtagactatacaagtgatg 6630492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 9516826 - 9516886
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||||||||||||||||||  |||||||||||||||||    
T  9516826 tagagtatcgtatccacatggattgtcgtttcgtccaaacaactcgcgttacttatttttg 9516886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 99 - 256
Target Start/End: Original strand, 24215615 - 24215773
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgtt 198  Q
    ||||||||||||| |||||  |||| | |||||||||| ||||||||| | ||| || ||  || |||| ||||||||||||| | |||||| |||||||    
T  24215615 ttgcaatttttatttgtttgaaacagaacaagttacctattttggttgcaaaaatgttagcggcagttaggattctttgaatc-cccctattcatttgtt 24215713  T
Q  199 ggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
     |||||||||||||||||  |  | || ||||||||||||| ||||||  ||||||||||    
T  24215714 tgaattaaataacattcatgttgcgttcagttatcttaagtggactatttaagtgatgag 24215773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 27124452 - 27124372
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||||||| ||||| ||||| |||||||| |||||| ||||||| ||||||||||| |||||||| |||||||||||||    
T  27124452 caatttttatatgtttgcaacagagcaagtttacctgtcttggttgcagaaaagtaagcagcggttaagattctttgaatc 27124372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 21 - 167
Target Start/End: Complemental strand, 8039177 - 8039028
Alignment:
Q  21 gattgtcgtttcgtccaaacaatacgcgttacttatttt---tgaacaattaaaacaaataaaagagttgaggcttagggattgcaatttttatctgttt 117  Q
    |||||||||||| |||||||||| || ||||||||||||   |||  |  ||| |  |||||||||||| ||| |||| ||||||||||||||| |||||    
T  8039177 gattgtcgtttcatccaaacaattcgtgttacttattttgtttgacgatataataataataaaagagttaagggttagagattgcaatttttatatgttt 8039078  T
Q  118 tcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggtta 167  Q
     |||   | | |||||||| ||||||||||||||||||||| || |||||    
T  8039077 gcaatcgaacgagttacctattttggttgtagaaaagtaagtagtggtta 8039028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 17827150 - 17827091
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| | ||||||||||||| |||||||||| ||||||||||||||||    
T  17827150 tagagtatcgtatccacatggattgtcgtttcttccaaacaattcgcgttacttattttt 17827091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 9838470 - 9838654
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||  ||  |||| ||||| ||||||||||||||| ||| | ||||||||||| |||||||||| ||||||||||| |  ||||| |||||    
T  9838470 aaataaaagagtgaagcgttagagattgtaatttttatctgtttgcaaaagagcaagttacccgttttggttgcagaaaagtaagcaatggttaggattc 9838569  T
Q  174 tttgaatctctcctatttatttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||  |||| | ||||| |||||| | || ||||||||  | |||  ||   |||| ||||||||| ||||||||||||||||||||    
T  9838570 ttcaaatc-cccctatgtatttgctagatattaaatattagtcatgtcgtgtttatttatcttaattagactatacaagtgatgag 9838654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 9726063 - 9726120
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    |||||||||||||||| | ||||||||||||||||||||||||  |||||||||||||    
T  9726063 tagagtatcgtatccacatggattgtcgtttcgtccaaacaatttgcgttacttattt 9726120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 21672394 - 21672234
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgtt 198  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||| |||| | |||||||||  ||||||| || | ||| |||| | ||||||||||| ||    
T  21672394 ttgcaatttttatctatttgcaactgagcaagttacctgttttcgttgcataaaagtaagtggcggttaggaatatttcaatcccccctatttatttttt 21672295  T
Q  199 gga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||| ||||||||| | | |  ||   |||| |||||||| |||||||||| ||||||||||    
T  21672294 ggatattaaataaaagtaatgtcgtgtttatttatcttaggtagactatataagtgatgag 21672234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 21679810 - 21679650
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgtt 198  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||| |||| | |||||||||  ||||||| || | ||| |||| | ||||||||||| ||    
T  21679810 ttgcaatttttatctatttgcaactgagcaagttacctgttttcgttgcataaaagtaagtggcggttaggaatatttcaatcccccctatttatttttt 21679711  T
Q  199 gga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||| ||||||||| | | |  ||   |||| |||||||| |||||||||| ||||||||||    
T  21679710 ggatattaaataaaagtaatgtcgtgtttatttatcttaggtagactatataagtgatgag 21679650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 23232037 - 23231981
Alignment:
Q  5 gtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||| |||||||||| ||||||| |||||||||||||| |||||||||||||||||    
T  23232037 gtatcatatccataagaattgtcggttcgtccaaacaattcgcgttacttatttttg 23231981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 193
Target Start/End: Complemental strand, 23844425 - 23844330
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat 193  Q
    ||||||||||||||||||| ||| | | |||||| |||||||||||||| | ||||||||| |||||||| |||| || ||||| ||||| |||||    
T  23844425 ttgcaatttttatctgtttgcaatagaccaagtttacctgttttggttgcataaaagtaagcagcggttaggatttttcgaatccctcctgtttat 23844330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 24657425 - 24657346
Alignment:
Q  103 aatttttatctgttttcaacaaagc-aagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||| ||||| ||| || |||||||||||||||| ||||||||||| ||||||||  |||||| |||||    
T  24657425 aatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaagtaagcagcggttagaattcttcgaatc 24657346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 14079419 - 14079256
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacct-gttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    ||||||||||||||||||| |||||||| ||| || |||  ||||||||  ||||||||||| ||||||||  |||||| ||||  | ||||||||| ||    
T  14079419 ttgcaatttttatctgtttgcaacaaaggaagttttcctatttttggttacagaaaagtaagcagcggttagaattcttcgaattccccctatttatatt 14079320  T
Q  196 gttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||| ||||||||||| |||  ||   |||| |||||||  ||||||||||||||| |||||    
T  14079319 gttggatattaaataacagtcatgtcgtgtttatttatctttggtagactatacaagttatgag 14079256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 23844523 - 23844463
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||| |||| | | |||||||||||||||||||||||  |||||||||||||||||    
T  23844523 tagagtatcatatctaaagggattgtcgtttcgtccaaacaactcgcgttacttatttttg 23844463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 210
Target Start/End: Original strand, 2586861 - 2586967
Alignment:
Q  103 aatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttggaa 202  Q
    |||||| |||| ||||||||| | |||||||| ||| || |||| ||||| || |  |||||||| ||||||||||||| | |||||  |||||||||||    
T  2586861 aattttaatctattttcaacacaacaagttacatgtcttagttgcagaaatgttaccagcggttaggattctttgaatc-cccctatacatttgttggaa 2586959  T
Q  203 ttaaataa 210  Q
    ||||||||    
T  2586960 ttaaataa 2586967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 17729193 - 17729244
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttac 52  Q
    |||||||||||||||| || |||||||||||||||||||| || ||||||||    
T  17729193 tagagtatcgtatccacaaagattgtcgtttcgtccaaacgattcgcgttac 17729244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 22410385 - 22410326
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| | ||||||||||||| | |||||||| | ||||||||||||||    
T  22410385 tagagtatcgtatccacagggattgtcgtttcattcaaacaattcacgttacttattttt 22410326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 25781916 - 25781975
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaa 157  Q
    ||||||||||||||||||| ||||| |||||| |||||| ||||||||| ||||||||||    
T  25781916 ttgcaatttttatctgtttgcaacagagcaagtttacctattttggttgcagaaaagtaa 25781975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 87
Target Start/End: Complemental strand, 17299889 - 17299804
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttg 87  Q
    ||||||||||||| |||  |||||||||||| |||||||||||  |||||||||||||  |||||| | ||  ||||||||||||||    
T  17299889 tagagtatcgtattcatcgggattgtcgtttagtccaaacaatttgcgttacttatttgagaacaaat-aattaaataaaagagttg 17299804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 21688853 - 21688795
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||| ||||||||| ||||||||||| | |||||| ||| |||||||||||||||    
T  21688853 tagagtattgtatccatagggattgtcgttacatccaaaaaattcgcgttacttatttt 21688795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 23143763 - 23143821
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    ||||||||| |||||| | |||||||||||||||||||||||| |  ||||||||||||    
T  23143763 tagagtatcatatccacagggattgtcgtttcgtccaaacaattcatgttacttatttt 23143821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 5624779 - 5624864
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctc 183  Q
    |||||||||||||||||||  || | ||||  ||||| | ||||||||| ||||||||||| |||||||| ||||||| |||||||    
T  5624779 ttgcaatttttatctgtttgtaatagagcagtttaccggcttttggttgcagaaaagtaagcagcggttaggattcttcgaatctc 5624864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 11136034 - 11136119
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctgtttt-ggttgtagaaaa-gtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| ||| || ||||||||||| ||||| | |||| |||||||||||||| ||||||| |||||    
T  11136034 ttgcaatttttatctgtttgcaacagagcgaacttacctgtttttggttgcaaaaaaagtaagaagcggttaggattcttcgaatc 11136119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 106 - 166
Target Start/End: Original strand, 17382214 - 17382275
Alignment:
Q  106 ttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggtt 166  Q
    |||||||||||| ||||| |||||||| || ||||||||||| ||||||||||| |||||||    
T  17382214 ttttatctgtttgcaacagagcaagtttacatgttttggttgcagaaaagtaagcagcggtt 17382275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 135 - 180
Target Start/End: Complemental strand, 18075334 - 18075289
Alignment:
Q  135 ctgttttggttgtagaaaagtaagaagcggttatgattctttgaat 180  Q
    |||||||||||| ||||||||||| |||||||| ||||||||||||    
T  18075334 ctgttttggttgcagaaaagtaagcagcggttaagattctttgaat 18075289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 161 - 209
Target Start/End: Complemental strand, 7542854 - 7542807
Alignment:
Q  161 gcggttatgattctttgaatctctcctatttatttgttggaattaaata 209  Q
    ||||||||||||||| ||||||| |||||| ||||||||||||||||||    
T  7542854 gcggttatgattcttcgaatctc-cctattcatttgttggaattaaata 7542807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 141
Target Start/End: Original strand, 11176991 - 11177131
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| | || |||||||||| || ||| ||| || ||||||||||||  |   |  | |  ||||||||||| | ||| ||||  |||    
T  11176991 tagagtatcgtatccacatgggttgtcgtttcttcgaaataattcgtgttacttattttaaattgacgatataaaataaaagagataagggttagaaatt 11177090  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgtttt 141  Q
    |||||||||||  |||| ||||| |||||||||||||||||    
T  11177091 gcaatttttataagtttgcaacatagcaagttacctgtttt 11177131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21672493 - 21672434
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| | ||||| || ||||||||||||||| || ||||||| |||||    
T  21672493 tagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttactttttttt 21672434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21679909 - 21679850
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| | ||||| || ||||||||||||||| || ||||||| |||||    
T  21679909 tagagtatcgtatccacatggattatcttttcgtccaaacaattcgtgttactttttttt 21679850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 193 - 253
Target Start/End: Complemental strand, 21688715 - 21688654
Alignment:
Q  193 tttgttggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtgat 253  Q
    |||||||||||||||||| ||||||  | | |||||| |||||||||||||||||||||||||    
T  21688715 tttgttggaattaaataa-attcatgtcgcgtttagtcatcttaagtagactatacaagtgat 21688654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 25781852 - 25781891
Alignment:
Q  22 attgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||||||||| | |||||||||||||||    
T  25781852 attgtcgtttcgtccaaacaattcacgttacttatttttg 25781891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 17827056 - 17826974
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaat 180  Q
    ||||||||||||| ||||| ||||| ||||  |||| |||||| ||||| ||||||||||| | ||||||  |||||||||||    
T  17827056 ttgcaatttttatatgtttgcaacatagcagtttacttgtttttggttgcagaaaagtaagcaacggttagaattctttgaat 17826974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 22413022 - 22412940
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaat 180  Q
    |||||| ||||||||||||  |||| ||| || |||||||||||||||  || |||||||| |||||||| ||||||| ||||    
T  22413022 ttgcaacttttatctgtttgtaacagagcgaatttacctgttttggttacaggaaagtaagtagcggttaggattcttcgaat 22412940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 64
Target Start/End: Complemental strand, 27124545 - 27124487
Alignment:
Q  6 tatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaac 64  Q
    ||||||||| | | ||||||||||||||  |||||||| | ||||||||||||||||||    
T  27124545 tatcgtatcgacatggattgtcgtttcgagcaaacaattctcgttacttatttttgaac 27124487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 222 - 262
Target Start/End: Original strand, 14637120 - 14637160
Alignment:
Q  222 tttagttatcttaagtagactatacaagtgatgagaacatt 262  Q
    |||| |||||||| ||||||||||||||||||||| |||||    
T  14637120 tttatttatcttatgtagactatacaagtgatgaggacatt 14637160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 120 - 175
Target Start/End: Complemental strand, 17883781 - 17883725
Alignment:
Q  120 aacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctt 175  Q
    |||| ||||| ||||||||||| ||||| ||||||||||| |||| |||||||||||    
T  17883781 aacatagcaatttacctgtttttggttggagaaaagtaagcagcgtttatgattctt 17883725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 20005879 - 20005795
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||| ||||| ||||| ||| || ||||||| ||||||||| ||||| ||| | |||||||| ||||||| |||||    
T  20005879 ttgcaatttttatttgtttgcaacagagcgagtttacctgtttttggttgcagaaaggtatgcagcggttaagattcttcgaatc 20005795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 21841660 - 21841612
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttg 146  Q
    |||||||||||||||| || |||||||||||| |||| |||||||||||    
T  21841660 ttgcaatttttatctgattgcaacaaagcaagtttacttgttttggttg 21841612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 100; Significance: 2e-49; HSPs: 82)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 3734637 - 3734895
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| | | ||||| |||| ||||||||||| | |||||||||||||      |  | |  ||||||||||||| ||| |||  ||||    
T  3734637 tagagtatcgtatccacatgaattgttgtttggtccaaacaattcacgttacttattttaagttgacgatataaaataaaagagttaagggttaaagatt 3734736  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttattt-gttg 199  Q
    |||| |||||||||||| ||||| |||||||||||||||||||||| ||||||||||| |  ||||| || |||||||||||| ||||||||||| ||||    
T  3734737 gcaaattttatctgtttgcaacagagcaagttacctgttttggttgcagaaaagtaagcaatggttaggactctttgaatctcccctatttatttcgttg 3734836  T
Q  200 gaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||||||||||||  |||  ||||||||| |||||||||||||||||||||||||    
T  3734837 gaattaaataacattcatgtcatgtttagttattttaagtagactatacaagtgatgag 3734895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 206
Target Start/End: Original strand, 18662482 - 18662685
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt-tgaacaattaaaacaaataaaagagttgaggcttagggat 99  Q
    |||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||  |||||||  || | |||||||||| |||||  ||||  ||    
T  18662482 tagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcacgttacttatttggtgaacaa--aatataaataaaagatttgagagttagatat 18662579  T
Q  100 tgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttg 199  Q
    |||||||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||| |||||||| || |||| ||||| | |||| | ||||||||    
T  18662580 tgcaatttttatttgtttgcaacagagcaagttacctgttttggttgcagaaatgtaagcagcggttaggactcttcgaatc-cccctaatcatttgttg 18662678  T
Q  200 gaattaa 206  Q
    |||||||    
T  18662679 gaattaa 18662685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 31492971 - 31493179
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| | |||||||||||| |||||||||||  |  ||||||||||| ||||||| |||| ||||||||||||||||| |||| |  |    
T  31492971 tagagtatcgtatccacatggattgtcgttttgtccaaacaatttgttttacttatttt-gaacaat-aaaataaataaaagagttgagggttagag--t 31493066  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 200  Q
    ||||||||||||||||| ||||| ||  |||||| ||||||||||||||||| ||||| | |||||| ||||||| ||| | ||| |||| |||||||||    
T  31493067 gcaatttttatctgtttgcaacagagtcagttacttgttttggttgtagaaatgtaagcaacggttaggattcttcgaa-ccctcttattcatttgttgg 31493165  T
Q  201 aattaaataacatt 214  Q
    ||||||||||||||    
T  31493166 aattaaataacatt 31493179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 97 - 257
Target Start/End: Original strand, 7397278 - 7397441
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttattt 195  Q
    ||||||||||||||||||||| ||||||| ||||||| ||||||| ||||| ||||||||||| |||||||| ||||||| ||||  |  ||||| ||||    
T  7397278 gattgcaatttttatctgtttgcaacaaaacaagttatctgtttttggttgcagaaaagtaagcagcggttaggattcttcgaattccctctattcattt 7397377  T
Q  196 gttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgaga 257  Q
    |||||||||||||||||||||  |  |  ||||||||||||||||||||||||||||| |||||    
T  7397378 gttggaattaaataacattcatgtggcgattagttatcttaagtagactatacaagtgttgaga 7397441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 287
Target Start/End: Original strand, 6013634 - 6013921
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| ||||||| || |||  ||||||||||  || ||||||||||| |    || | |  ||||||||||||  ||| |||| ||||    
T  6013634 tagagtatcgtatccacaaggattctcattttatccaaacaattggctttacttattttagtttgatgatataaaataaaagagtaaagggttagcgatt 6013733  T
Q  101 gcaattttt-atctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttattt-gtt 198  Q
    ||||||||| || ||||| ||||||||||| |||| ||||| ||||| |||||||| || | ||||||||| |||||||||| ||| ||||||||| |||    
T  6013734 gcaattttttatttgtttgcaacaaagcaatttacatgttt-ggttgcagaaaagtgagcaacggttatgactctttgaatccctc-tatttattttgtt 6013831  T
Q  199 ggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgagaacattgagatttatctaacctagtcggttt 287  Q
    ||| |||||||||||||||  | | |||||||||| ||| |||||||||||||||||||| || ||| ||  | |||||||||||||||||    
T  6013832 ggatttaaataacattcatgtcccgtttagttatcataaatagactatacaagtgatgaggacgttgggacgt-tctaacctagtcggttt 6013921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 1 - 286
Target Start/End: Complemental strand, 17153212 - 17152920
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| |  ||||||||||||||| |||||   |||||||||||||||      |  | |  ||||||||||| | ||| |||| ||||    
T  17153212 tagagtatcgtatccacatagattgtcgtttcgtctaaacagctcgcgttacttattttaagttgacgacataaaataaaagagataagggttagagatt 17153113  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaat-ctctcctatttatt---t 195  Q
    |  |||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| ||||||||||| ||||||||| | | ||||||||||   |    
T  17153112 gttatttttatctgtttgcaacaaagcaagttacctgtttttggttgcagaaaagtaagcagcggttatgactctttgaatccccccctatttatttagt 17153013  T
Q  196 gttgga-attaaataaca--ttcatcacatttagttatcttaagtagactatacaagtgatgagaacattgagatttatctaacctagtcggtt 286  Q
     ||||| |||||||||||  |   || | |||||||||||||||||||||||||||||||||||  | ||||||  | ||||||||||||||||    
T  17153012 tttggatattaaataacagttgtgtcgcgtttagttatcttaagtagactatacaagtgatgaggccgttgagacat-tctaacctagtcggtt 17152920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 1 - 257
Target Start/End: Original strand, 7318314 - 7318574
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| | |||||||||||||||| |||||   ||| |||||||||||      |  | |  ||||||||||| | ||| |||| ||||    
T  7318314 tagagtatcgtatccacatggattgtcgtttcgtctaaacagctcgcattacttattttaagttgacgatataaaataaaagagataagggttagagatt 7318413  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacct-gttttggttgtagaaaagtaagaagcggttatgattc-tttgaatctctcctattta-tttgt 197  Q
    ||||||||||||||||| ||||| |||||||||| |  ||||||||| ||||||| ||  | || ||| || || |||||||| | |||||||| |||||    
T  7318414 gcaatttttatctgtttgcaacagagcaagttacttctttttggttgcagaaaaggaaacaacgattaggactcttttgaatc-cccctatttattttgt 7318512  T
Q  198 tggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgaga 257  Q
    |||||||||||||||||||  |  | ||||||||||||||||||||||||||||||||||||    
T  7318513 tggaattaaataacattcatgttgcgtttagttatcttaagtagactatacaagtgatgaga 7318574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 74 - 232
Target Start/End: Complemental strand, 8313377 - 8313217
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||| ||| |||| ||||||||||||||||||||||||||| |||||||||||| ||||||||| ||||||||||| | |  ||| || ||    
T  8313377 aaataaaagagttaagggttagagattgcaatttttatctgttttcaacagagcaagttacctattttggttgcagaaaagtaagcaacatttaggactc 8313278  T
Q  174 tttgaatctctcctattta-tttgttggaattaaataacattca--tcacatttagttatct 232  Q
    || ||||| | |||||||| ||||||||| |||||||||  |||  ||||||||||||||||    
T  8313277 ttggaatc-cccctatttattttgttggatttaaataaccatcatgtcacatttagttatct 8313217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 77 - 255
Target Start/End: Original strand, 17829686 - 17829866
Alignment:
Q  77 taaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattcttt 176  Q
    |||| ||||| ||| |||| ||||| ||||||||||||||| ||||| | ||||||| |||||||||||| |||||| |||| || ||||| |||||||     
T  17829686 taaaggagttaagggttagcgattgtaatttttatctgtttgcaacagaacaagttaactgttttggttggagaaaattaagcagtggttaagattcttc 17829785  T
Q  177 gaatctctcctatttatttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatga 255  Q
    ||||| | |||||||||||||| || ||||||||| |||||  |||  |||| |||| ||||||||||||||||||||||||    
T  17829786 gaatc-cccctatttatttgttagatattaaataaaattcatgtcatgtttatttatgttaagtagactatacaagtgatga 17829866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 74 - 266
Target Start/End: Original strand, 9574521 - 9574715
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||| ||| ||||  |||| ||||||||||||||| ||| | ||||||| ||||| |||| ||| ||||||||||  ||| |||| |||||    
T  9574521 aaataaaagagttaagggttagaaattgtaatttttatctgtttgcaatagagcaagtaacctggtttgtttgaagaaaagtaaacagcagttaggattc 9574620  T
Q  174 tttgaatctctcctattta-tttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgagaacattgaga 266  Q
    |||||||| | |||||||| ||||||||| ||||||||||| |||  || | ||| |||||||||||||||||||| ||||||||||| ||||||||    
T  9574621 tttgaatc-cccctatttattttgttggatattaaataacaatcatgtcgcgttttgttatcttaagtagactata-aagtgatgagaccattgaga 9574715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 20 - 256
Target Start/End: Complemental strand, 8294079 - 8293842
Alignment:
Q  20 ggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggctt-agggatt-gcaatttttatctgttt 117  Q
    ||||||||||||||| |||||||  ||| ||||||||||  |||||| | ||    ||||||||||||||| || || |||| | |||||||||||||||    
T  8294079 ggattgtcgtttcgttcaaacaaatcgcattacttatttcagaacaaattaat---ataaaagagttgaggttttagagatttgtaatttttatctgttt 8293983  T
Q  118 tcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttggaattaaataacattca- 216  Q
     ||||| |||||||||||||||||||||| ||||| ||  | || ||||| |||||||||||| || || | | ||||||||||||||||||||| |||     
T  8293982 gcaacagagcaagttacctgttttggttgcagaaatgttcgcagtggttaggattctttgaatatccccaactcatttgttggaattaaataacaatcaa 8293883  T
Q  217 -tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
     || | || ||||||  ||||||||||||  ||||||||||    
T  8293882 gtcgcgttcagttattctaagtagactatctaagtgatgag 8293842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 17203064 - 17203174
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||||||||||| ||   |||||||||||||||||||||||| ||||||||||||||||||||||| |||  ||||||||||||| ||| |||  ||||    
T  17203064 tagagtatcgtattcacggggattgtcgtttcgtccaaacaatccgcgttacttatttttgaacaataaaattaaataaaagagtttagggttatagatt 17203163  T
Q  101 gcaatttttat 111  Q
     ||||||||||    
T  17203164 acaatttttat 17203174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 18369038 - 18368856
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttag---gg 97  Q
    |||||||| ||||||||| |||||||||||||||||||||||| |  ||||||||||||| |  | || | | | |||||||| |  ||| ||||   |     
T  18369038 tagagtattgtatccatagggattgtcgtttcgtccaaacaattctagttacttattttt-ataagttgacaaatataaaaga-taaagggttagaaagt 18368941  T
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
      |||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||| |||||||    
T  18368940 cgtgcaatttttatctgtttgcaacaaagcaagttacctgcttttggttgtagaaaagtaagaaacggttaggattccttgaatc 18368856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 105 - 255
Target Start/End: Original strand, 4785985 - 4786140
Alignment:
Q  105 tttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgttgga- 201  Q
    ||||||||| ||| ||| | ||||||||||||||||| ||||| ||||||||||| |||||||| ||||||| ||||| ||||||||||| ||||||||     
T  4785985 tttttatctatttgcaatagagcaagttacctgtttttggttgcagaaaagtaagcagcggttaggattcttcgaatccctcctatttatattgttggat 4786084  T
Q  202 attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatga 255  Q
    |||||||||||   |  |||| || | |||||||| ||||||||||||||||||||    
T  4786085 attaaataacagcaatgtcacgttcatttatcttaggtagactatacaagtgatga 4786140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 20 - 152
Target Start/End: Original strand, 10648638 - 10648770
Alignment:
Q  20 ggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaat-taaaacaaataaaagagttgaggcttagg-gattgcaatttttatctgttt 117  Q
    ||||||||||||| || ||||||| || |||||||||||| ||||||  ||| ||||   |||||||||||| ||| | |||||||||||||||||||||    
T  10648638 ggattgtcgtttcatctaaacaattcgtgttacttattttagaacaaaataatacaat--aaagagttgagggttaagagattgcaatttttatctgttt 10648735  T
Q  118 tcaacaaagcaagttacctgttttggttgtagaaa 152  Q
     |||||||||||||||| ||||||||||| |||||    
T  10648736 gcaacaaagcaagttacatgttttggttgcagaaa 10648770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 4 - 158
Target Start/End: Complemental strand, 14196028 - 14195873
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt--ttgaacaattaaaacaaataaaagagttga-ggcttagggatt 100  Q
    |||| |||||||| ||| ||| | |||||||||||||||| ||||||||||||||  || |||||  || | ||||||||||||||| || | || ||||    
T  14196028 agtaccgtatccacaagaattattgtttcgtccaaacaattcgcgttacttatttcgtttaacaa--aatataaataaaagagttgatggataagagatt 14195931  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaag 158  Q
    ||||||||||||||||| ||||| ||||||||| |||||||| ||| ||||| |||||    
T  14195930 gcaatttttatctgtttgcaacagagcaagttatctgttttgattgcagaaatgtaag 14195873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 97 - 245
Target Start/End: Complemental strand, 10586986 - 10586834
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgttt-tggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tt 194  Q
    ||||||||||||||||||||| ||||| |||||| ||| ||||| |||||| | ||||||||| || ||||| || |||||||||| | | |||||| ||    
T  10586986 gattgcaatttttatctgtttgcaacagagcaagatacatgtttctggttgcaaaaaagtaagcagtggttaagactctttgaatc-cccttatttattt 10586888  T
Q  195 tgttgga-attaaataacattca--tcacatttagttatcttaagtagactata 245  Q
    ||||||| |||||||||||||||  || | ||||||||||||||||||||||||    
T  10586887 tgttggatattaaataacattcatgtcgcgtttagttatcttaagtagactata 10586834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 16365746 - 16366007
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaaca-aataaaagagttgaggcttaggga- 98  Q
    |||||||||||||||| | |||||||||||| || |||||||| ||||||||||||||||  |   | |  | | |||||||||||| ||| |||| ||     
T  16365746 tagagtatcgtatccacatggattgtcgttttgtgcaaacaattcgcgttacttattttt--aagttgacgatataataaaagagttaaggtttagagat 16365843  T
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    || ||||||| |||| ||| || |  |||||||||| || ||||||||| | ||||||||| |||||||| ||||||| ||||||| ||||||||| |||    
T  16365844 tttcaattttgatctatttgcatctgagcaagttacatgtttttggttgcaaaaaagtaagcagcggttaggattcttcgaatctcccctatttatattg 16365943  T
Q  197 ttgga-attaaataacattcatcaca---tttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||| ||||||||| | | ||  ||   |||| |||||||||||||| |||||||||||||||    
T  16365944 ttggatattaaataaaagtaatgtcatcgtttatttatcttaagtagaatatacaagtgatgag 16366007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 1848188 - 1848103
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctc 183  Q
    |||||||||||||||||||  |||| |||||||| |||||||||||||| ||||||||||| |||||||||||||||| |||||||    
T  1848188 ttgcaatttttatctgtttgaaacagagcaagtttacctgttttggttgcagaaaagtaagcagcggttatgattcttcgaatctc 1848103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 92 - 256
Target Start/End: Complemental strand, 3191026 - 3190860
Alignment:
Q  92 ttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcc-tatt 190  Q
    |||| ||||| ||||||||| ||||| ||||| | ||||||| || ||| ||||| ||||||||||| ||||  || || | |||||||| | || ||||    
T  3191026 ttagagattgtaatttttatatgtttgcaacaga-caagttatctattt-ggttgcagaaaagtaagtagcgagtaggactatttgaatccccccctatt 3190929  T
Q  191 tattt-gttggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||| |||||| |||||||||| ||||  |||||||||||||||||||||||||||||||||||||||    
T  3190928 tattttgttggatttaaataacagtcatgtcacatttagttatcttaagtagactatacaagtgatgag 3190860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 201
Target Start/End: Original strand, 140253 - 140357
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttg 196  Q
    |||||| |||||||||||||| ||||| ||||||||||||||||| |||| ||||| || || |||||| | ||||||||||||| || ||| |||||||    
T  140253 gattgccatttttatctgtttgcaacagagcaagttacctgttttagttgcagaaatgttagtagcggtcaggattctttgaatcccttctacttatttg 140352  T
Q  197 ttgga 201  Q
    |||||    
T  140353 ttgga 140357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 250
Target Start/End: Original strand, 6006076 - 6006228
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttg 196  Q
    |||||||||||| |||||||| ||||| || ||||||||||||||||| | ||||||||||| |||||||| |||| || ||| ||  ||||||||||||    
T  6006076 gattgcaatttt-atctgtttgcaacagagtaagttacctgttttggtggcagaaaagtaagtagcggttaagattgttcgaa-ct-acctatttatttg 6006172  T
Q  197 ttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagt 250  Q
    |||||| ||||||| ||| |  || | |||| ||||||||||||| ||||||||||    
T  6006173 ttggaaataaataagattaatgtcgcgtttatttatcttaagtaggctatacaagt 6006228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 102 - 255
Target Start/End: Original strand, 5108706 - 5108864
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagtt-acctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgtt 198  Q
    |||||||||||||||| ||| | |||||||| || || ||||||||| ||||||||||| |||||||| ||||||||||||| | ||||||||| |||||    
T  5108706 caatttttatctgtttgcaagagagcaagtttacttgattttggttgcagaaaagtaagcagcggttaggattctttgaatc-cccctatttatattgtt 5108804  T
Q  199 gga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatga 255  Q
    ||| ||||||||| |||||  ||   |||| ||||||||  |||||||||||||||||||    
T  5108805 ggatattaaataaaattcatgtcgtgtttatttatcttagatagactatacaagtgatga 5108864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 7492321 - 7492160
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaaca-aataaaagagttgaggcttagggat 99  Q
    |||||||||||||||| ||||||||| ||||||| ||||||||  || ||||||||||||  |   | |  | | |||||||||||| ||| |||| |||    
T  7492321 tagagtatcgtatccacaaggattgttgtttcgttcaaacaatttgcattacttattttt--attttgatgatataataaaagagttaagggttagagat 7492224  T
Q  100 t-gcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaag 161  Q
    | |||||||||| |||||| ||||| ||||||||||||| ||||||||| ||||||||||||||    
T  7492223 ttgcaatttttaactgtttgcaacagagcaagttacctgtttttggttgcagaaaagtaagaag 7492160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9731685 - 9731626
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||    
T  9731685 tagagtatcgtaaccacaaggattgtcgtttcgtccaaacaattcgcgttacttattttt 9731626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 13418660 - 13418743
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||| ||| || |||||||| |||||||| |||||||||||||    
T  13418660 ttgcaatttttatctgtttgcaacagagcaagtttacctgttttgattgcagcaaagtaagcagcggttaggattctttgaatc 13418743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 1587819 - 1587975
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctat-ttattt 195  Q
    ||||||||||||||| ||||| ||||| |||||||||||  | ||||||| ||||||||||| ||||| ||||| |||||||||| | | ||| |  |||    
T  1587819 gattgcaatttttatttgtttgcaacagagcaagttacc--tcttggttgcagaaaagtaagcagcggatatgaatctttgaatc-cccatatctctttt 1587915  T
Q  196 gttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgat 253  Q
    |||| ||||||||||||||||  || | ||||||| ||||| ||||||| || |||||||    
T  1587916 gttgtaattaaataacattcatctcgcgtttagttgtcttatgtagactgtataagtgat 1587975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 3329716 - 3329542
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaaca-aataaaagagttgaggcttaggga- 98  Q
    |||||||||||||||| | ||||||||||||| ||||||||||  |||||||||||||||| |   ||||   | ||| |||||  | ||| |||| ||     
T  3329716 tagagtatcgtatccacatggattgtcgtttcatccaaacaatctgcgttacttatttttgtaagtttaacgtataatgaaaga--taagggttagagag 3329619  T
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||||||||| ||||| |||||| |||| || ||||||||| ||||||||||| |||||||| |||||    
T  3329618 ttgcaatttttatctgtttgcaacatagcaagtttacttgtttttggttgcagaaaagtaagcagcggttaggattc 3329542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 78 - 252
Target Start/End: Complemental strand, 16297815 - 16297644
Alignment:
Q  78 aaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacct-gttttggttgtagaaaagtaagaagcggttatgattcttt 176  Q
    ||||||||| ||| ||||  |||||||||||||| ||||| ||||| || |||||||||  ||||||||| ||||||||||| ||||||||  | ||       
T  16297815 aaaagagttaagggttagaaattgcaatttttatatgtttgcaacagagtaagttacctatttttggttgcagaaaagtaagcagcggttagaaatc--- 16297719  T
Q  177 gaatctctcctatttatttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtga 252  Q
        ||| ||||||||||||||||| ||||||||||| |||  || | |||| ||| ||||||||||||||||||||||    
T  16297718 ----ctcacctatttatttgttggatattaaataacagtcatgtcgcgtttatttaccttaagtagactatacaagtga 16297644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 11803121 - 11803181
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| ||||||||||||||| |||||||||||||||||    
T  11803121 tagagtatcgtatccacagggattgtcctttcgtccaaacaattcgcgttacttatttttg 11803181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13759918 - 13759858
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||| |||||| |||||||||||||||||||||||| | |||||||||||||||||    
T  13759918 tagagtatcatatccacaaggattgtcgtttcgtccaaacagttcgcgttacttatttttg 13759858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 20582394 - 20582477
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||| ||| ||||| |||||||| |||||||||||||| ||||||||||| ||| |||| ||||||| |||||    
T  20582394 ttgcaatttttatctatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagcagttaggattcttcgaatc 20582477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 21501413 - 21501562
Alignment:
Q  108 ttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttggaattaaa 207  Q
    |||||||||| ||||||| |||||||||||||||||||| || || || || ||| ||||  ||| |||||||| | | |||| ||||||||||||||||    
T  21501413 ttatctgtttgcaacaaaacaagttacctgttttggttgcag-aatgttagcagcagttagaattatttgaatcccccatattcatttgttggaattaaa 21501511  T
Q  208 taacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||| | |  || | || |||||||||| |||||||||  ||||||||||    
T  21501512 taacagttaagtcgcgttcagttatcttatgtagactatctaagtgatgag 21501562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 253
Target Start/End: Original strand, 1584435 - 1584496
Alignment:
Q  194 ttgttggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtgat 253  Q
    ||||||||||||||||||||||||  | | ||||||||||||||||||||||||||||||||    
T  1584435 ttgttggaattaaataacattcatatcgcgtttagttatcttaagtagactatacaagtgat 1584496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9916607 - 9916689
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaaga 83  Q
    |||||||||||||||| | ||||||| |||||  |||||||||| | |||||||||||  |||||||||||| ||||||||||    
T  9916607 tagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttacttatttgggaacaattaaaataaataaaaga 9916689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 83
Target Start/End: Original strand, 9924519 - 9924601
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaaga 83  Q
    |||||||||||||||| | ||||||| |||||  |||||||||| | |||||||||||  |||||||||||| ||||||||||    
T  9924519 tagagtatcgtatccacatggattgtagtttcaaccaaacaatatgtgttacttatttgggaacaattaaaataaataaaaga 9924601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 2563858 - 2563915
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    |||||||||||||||| ||||||||||||||||||||||||||  | |||||||||||    
T  2563858 tagagtatcgtatccacaaggattgtcgtttcgtccaaacaatttgtgttacttattt 2563915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 11221222 - 11221051
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggctt-agggat 99  Q
    |||||||| ||||||| | |||||||||||||||  |||||||  ||||||||||||||| ||| | ||||| ||| || |||||||||| || |   ||    
T  11221222 tagagtattgtatccacagggattgtcgtttcgtgtaaacaatttgcgttacttattttttaacga-taaaataaa-aagagagttgagggttaaaaaat 11221125  T
Q  100 tgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    |||||||||||| ||||| ||||| || ||||||| ||||||| || |||||| || || || ||||| |||||    
T  11221124 tgcaatttttatttgtttgcaacagagaaagttacttgttttgattttagaaatgttagcagtggttaggattc 11221051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 285
Target Start/End: Complemental strand, 39273233 - 39272945
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttaggga-t 99  Q
    ||||||||||||| |||| |||||||||||||||||||| |||  | |||||||||||||| | | ||  |  | |||||  |||| ||| |||   | |    
T  39273233 tagagtatcgtattcatatggattgtcgtttcgtccaaataatttgtgttacttatttttgta-agtttgacgatataaa--agttaagggttataaagt 39273137  T
Q  100 tgcaatttttatctgttttcaacaaagcaag-ttacct-gttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||| ||| |||| ||| ||||| |||||| ||||||  ||||||||| ||||||||||| |||||||| ||| ||| |||||||  || ||||| |||    
T  39273136 tgcaaatttaatctatttgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttaggatccttcgaatctcctctgtttatattg 39273037  T
Q  197 ttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgagaacattgagatttatctaacctagtcggt 285  Q
    ||||| ||||||||| | | |  || | |||| |||||||| |||||||||||||||||||||  | ||||||  | |||||||||||||||    
T  39273036 ttggatattaaataaaagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgaggccgttgagacgtttctaacctagtcggt 39272945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 158
Target Start/End: Original strand, 1584346 - 1584428
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaag 158  Q
    ||||||||||||| | | |||| ||||||||||||||||| ||| ||| ||||||||||||||  ||||||||||||||||||||    
T  1584346 aaataaaagagttaaaggttagagattgcaatttttatctttttgcaa-aaagcaagttacct-atttggttgtagaaaagtaag 1584428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 8877559 - 8877643
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaa-agtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| |||||| |||||| ||||||||| | ||| |||||| |||||||| |||||||||||||    
T  8877559 ttgcaatttttatctgtttgcaacagagcaagtttacctattttggttgcaaaaatagtaagcagcggttaggattctttgaatc 8877643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9500485 - 9500563
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaa 80  Q
    |||||||||||||||| ||||||||| |||||||| ||||||| ||| ||||||||||  |||||| ||||| |||||||    
T  9500485 tagagtatcgtatccacaaggattgttgtttcgtctaaacaattcgcattacttatttaggaacaa-taaaataaataaa 9500563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 13277630 - 13277713
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| | | | ||| | || |||||||||||||||||||||||||| |||| ||| |||||||||||||    
T  13277630 ttgcaatttttatctgtttgctatagagcgaattgacctgttttggttgtagaaaagtaagtagcgattaggattctttgaatc 13277713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 5108606 - 5108648
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaat 43  Q
    |||||||||||||||| ||||||||||||||||||||||||||    
T  5108606 tagagtatcgtatccacaaggattgtcgtttcgtccaaacaat 5108648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 8979064 - 8978804
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||||||| |||||| | ||||||| |||||||||||||||| ||| ||||||||||| | | | ||  |  | ||||||||    ||| |||||  ||    
T  8979064 tagagtatcatatccacatggattgttgtttcgtccaaacaattcgcattacttattttggta-agtttgacaatataaaagataaaagggttaggattt 8978966  T
Q  101 gcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgt 197  Q
    |||||||| |||||||| ||| | | |||| ||||||| ||||||||| |||||| |||| ||| |||| |||||||| |||| |  || ||||| ||||    
T  8978965 gcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagcagcagttaggattctttaaatcccctctgtttatattgt 8978866  T
Q  198 tgga-attaaataacatt--catcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||| ||||||||||| |   ||| | |||| |||||||| |||||||||||||| ||||||    
T  8978865 tggatattaaataacagtaatatcgcgtttatttatcttaggtagactatacaagagatgag 8978804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 67
Target Start/End: Complemental strand, 9864384 - 9864318
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaat 67  Q
    ||||||||| |||||| |||||||||||||||||| |||||||  |||||||||||||  |||||||    
T  9864384 tagagtatcatatccacaaggattgtcgtttcgtctaaacaatttgcgttacttatttgagaacaat 9864318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 4986818 - 4986893
Alignment:
Q  185 cctatttattt-gttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||| |||||| ||||||||||||||||  | | |||||||||||||||||||||||| ||||||||||    
T  4986818 cctatttattttgttggatattaaataacattcatgtcgcgtttagttatcttaagtagactatataagtgatgag 4986893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 185 - 256
Target Start/End: Original strand, 4990916 - 4990991
Alignment:
Q  185 cctatttattt-gttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||| |||||| ||||||||||||||||  | | |||||||||||||||||||||||| ||||||||||    
T  4990916 cctatttattttgttggatattaaataacattcatgtcgcgtttagttatcttaagtagactatataagtgatgag 4990991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 181
Target Start/End: Complemental strand, 8054016 - 8053940
Alignment:
Q  106 ttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||||| ||| ||| | |||||||| |||||||||||||| ||||||||||| ||| |||| |||||||||||||    
T  8054016 ttttatctatttgcaatatagcaagtttacctgttttggttgcagaaaagtaagcagcagttaggattctttgaatc 8053940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17077169 - 17077229
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||| ||||||||  |||||||||||||||||||||||| |  ||||||||||||||    
T  17077169 tagagtattgtatccatggggattgtcgtttcgtccaaacaattcatgttacttatttttg 17077229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 4579138 - 4579383
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggctt-agggat 99  Q
    |||||||||||||||| |  ||||||| ||| ||||||||||| || |||||||||||  |  |||   ||  |||||||| |||| ||| || || |||    
T  4579138 tagagtatcgtatccaaagagattgtctttttgtccaaacaattcgtgttacttatttgagtccaaaataataaaataaaa-agtttagggttaagagat 4579236  T
Q  100 tgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttg 199  Q
    | ||||||||||||||||  |||| |||||||||||| ||||||||| | |||  |  | |||||| |  ||||||  ||| ||   |||| ||||||||    
T  4579237 tacaatttttatctgtttgtaacatagcaagttacctattttggttgcataaatatttgtagcggtaagaattcttcaaatttcatatattcatttgttg 4579336  T
Q  200 gaattaaataacattca--tcacatttagttatcttaagtagactat 244  Q
    ||||||| ||||| |||  ||||||| ||||||  ||||||||||||    
T  4579337 gaattaattaacaatcaagtcacattcagttattctaagtagactat 4579383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 255
Target Start/End: Original strand, 4819004 - 4819141
Alignment:
Q  125 agcaagttacctgtttt-ggttgtagaaaagtaagaagcg--gttatgattctttgaatctctcctatttat-ttgttgga-attaaataacattca--t 217  Q
    |||||||||||| |||| ||||| ||||||||||| ||||  |||| ||||||| ||||| ||||||||||| |||||||| |||||||||||   |  |    
T  4819004 agcaagttacctatttttggttgcagaaaagtaagcagcgcggttaggattcttcgaatccctcctatttatattgttggatattaaataacagcaatgt 4819103  T
Q  218 cacatttagttatcttaagtagactatacaagtgatga 255  Q
    | | || | |||||||| ||||||||||||||||||||    
T  4819104 cgcgttcatttatcttaggtagactatacaagtgatga 4819141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12329723 - 12329782
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||| ||||||| |||||||||||||| | ||||| ||| ||||||||||||||||    
T  12329723 tagagtatagtatccacaaggattgtcgttttgcccaaataatccgcgttacttattttt 12329782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 13418575 - 13418634
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||||| |||||||| ||||||||||||| |   ||||||||||||||    
T  13418575 tagagtatcgtatccatagggattgtcctttcgtccaaacatttgtcgttacttattttt 13418634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 19153434 - 19153493
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaa 157  Q
    ||||||||||||||||||| ||||| | ||||||||||| ||||||||| ||||||||||    
T  19153434 ttgcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaagtaa 19153493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Original strand, 20752833 - 20752892
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaa 157  Q
    ||||||||||||||||||| ||||| | ||||||||||| ||||||||| ||||||||||    
T  20752833 ttgcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaagtaa 20752892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 22339366 - 22339312
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    ||||||| ||||  |||||||||||||||||||||||||| ||| ||||||||||    
T  22339366 agtatcgcatccgcaaggattgtcgtttcgtccaaacaattcgccttacttattt 22339312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 1848282 - 1848225
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||   |||||||| |||||||||||||||  ||||||||||||||||    
T  1848282 agtatcgtatccactgggattgtcctttcgtccaaacaatttgcgttacttatttttg 1848225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 4986736 - 4986816
Alignment:
Q  165 ttatgattctttgaatctctcctatttattt-gttgga-attaaataacattcat--cacatttagttatcttaagtagac 241  Q
    |||||| |||||||||| | ||||||||||| |||||| ||||||||||||||||  | | ||||||||||||||||||||    
T  4986736 ttatgactctttgaatcccccctatttattttgttggatattaaataacattcatgtcgcgtttagttatcttaagtagac 4986816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 165 - 241
Target Start/End: Original strand, 4990834 - 4990914
Alignment:
Q  165 ttatgattctttgaatctctcctatttattt-gttgga-attaaataacattcat--cacatttagttatcttaagtagac 241  Q
    |||||| |||||||||| | ||||||||||| |||||| ||||||||||||||||  | | ||||||||||||||||||||    
T  4990834 ttatgactctttgaatcccccctatttattttgttggatattaaataacattcatgtcgcgtttagttatcttaagtagac 4990914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 6042589 - 6042703
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||| ||||| ||||| || |  |||||| |||| ||||| |||||| |||| |||||||| |||||||||||  || ||||||||| |||    
T  6042589 ttgcaatttttatatgtttgcaacagagaagtttacctttttttggttgcagaaaaataagcagcggttaggattctttgaa--tcccctatttatattg 6042686  T
Q  197 ttgga-attaaataaca 212  Q
    ||||| |||||||||||    
T  6042687 ttggatattaaataaca 6042703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 97 - 256
Target Start/End: Original strand, 15869732 - 15869895
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-t 194  Q
    |||||||||||| |||||||| ||| | |  |||||||||||||| ||||| | ||||||||  | |||||| || |||||||||| | ||| ||||| |    
T  15869732 gattgcaatttt-atctgtttgcaatagaaaaagttacctgtttttggttgcataaaagtaaacaacggttaggactctttgaatcccccctgtttatat 15869830  T
Q  195 tgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||| | ||||||| ||| |  ||   ||||||||||||||||||||||| |||||||||||    
T  15869831 tgttggataataaataaaattaacgtcgtgtttagttatcttaagtagactatgcaagtgatgag 15869895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 17077254 - 17077323
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggtta 167  Q
    ||||||||||||||||||| ||| | || ||||| |||||||||| ||| ||||||||||| ||||||||    
T  17077254 ttgcaatttttatctgtttgcaatagagtaagtttacctgttttgtttgcagaaaagtaagcagcggtta 17077323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 6 - 67
Target Start/End: Original strand, 18449288 - 18449349
Alignment:
Q  6 tatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaat 67  Q
    ||||||||||||| |||||||||||||  |||||||||  |||||||||||||  |||||||    
T  18449288 tatcgtatccatagggattgtcgtttcagccaaacaattggcgttacttatttgggaacaat 18449349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 1584586 - 1584642
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||||||||| | ||||||| |||||||| ||||||  |||||||||||||||    
T  1584586 gagtatcgtatccacagggattgttgtttcgtctaaacaaatcgcgttacttatttt 1584642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 2350703 - 2350647
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaag 158  Q
    |||||||||||||||| ||||| | ||| |||||||||||||||| | |||||||||    
T  2350703 caatttttatctgtttacaacacatcaaattacctgttttggttgcaaaaaagtaag 2350647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 6005878 - 6005934
Alignment:
Q  2 agagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    ||||||| ||||||| | |||||||||||| ||||||||||| | ||||||||||||    
T  6005878 agagtattgtatccacatggattgtcgtttggtccaaacaattcacgttacttattt 6005934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8054547 - 8054487
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||||||| || | | |||||||||||||||||||||| |  ||||||||||||||    
T  8054547 tagagtatcgtattcacaggaattgtcgtttcgtccaaacaattcttgttacttatttttg 8054487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16059079 - 16059019
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| |||||||||||||||    ||||||||||||||    
T  16059079 tagagtatcgtatccacatggattgtcctttcgtccaaacaattttagttacttatttttg 16059019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 6042501 - 6042560
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| |  | |||||||||||| ||||||||  |||||||||||||||    
T  6042501 tagagtatcgtatccacagaggttgtcgtttcgttcaaacaatttgcgttacttattttt 6042560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 9131049 - 9131132
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||| ||||| ||| | ||||||||| ||| ||||||||| | |||||||||  ||||||| ||||||| |||||    
T  9131049 ttgcaatttttatttgtttgcaatagagcaagttaactgtttttggttgcaaaaaagtaagctgcggttaggattcttcgaatc 9131132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 162 - 205
Target Start/End: Complemental strand, 10339587 - 10339544
Alignment:
Q  162 cggttatgattctttgaatctctcctatttatttgttggaatta 205  Q
    |||||||||||||||||||||||  |||||||||||| ||||||    
T  10339587 cggttatgattctttgaatctcttttatttatttgttagaatta 10339544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 99 - 254
Target Start/End: Original strand, 2563956 - 2564116
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    ||| ||||||||||||||| ||||| |||||| ||||||| ||| | ||| ||||||||||| |||||||| ||| ||| ||||| | ||| ||||| ||    
T  2563956 ttgaaatttttatctgtttgcaacagagcaagtttacctgctttagtttgcagaaaagtaagtagcggttaggatccttcgaatc-cccctgtttatatt 2564054  T
Q  196 gttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatg 254  Q
     ||||| ||||||||||  |||  |  | |||| |||||||| |||||||||||||||||||    
T  2564055 attggatattaaataactgtcatgttgcgtttatttatcttaggtagactatacaagtgatg 2564116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 8877684 - 8877722
Alignment:
Q  217 tcacatttagttatcttaagtagactatacaagtgatga 255  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  8877684 tcacatttatttatcttaggtagactatacaagtgatga 8877722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 23100010 - 23099968
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaat 43  Q
    |||||||||||||||| |  |||||||||||||||||||||||    
T  23100010 tagagtatcgtatccacatagattgtcgtttcgtccaaacaat 23099968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 163 - 212
Target Start/End: Complemental strand, 19398707 - 19398658
Alignment:
Q  163 ggttatgattctttgaatctctcctatttatttgttggaattaaataaca 212  Q
    ||||| |||||||||||||||  |||| ||||||||||||||| ||||||    
T  19398707 ggttaggattctttgaatctcctctatctatttgttggaattatataaca 19398658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 169 - 256
Target Start/End: Complemental strand, 2350601 - 2350510
Alignment:
Q  169 gattctttgaatctctcctatttat-ttgttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||| ||||| | | ||||||| |||||||| ||||||||||| | ||  |||| ||| |||||||| |||||||||||||||||||||    
T  2350601 gattcttcgaatcccccatatttatattgttggatattaaataacagtaatgtcacaattatttatcttaggtagactatacaagtgatgag 2350510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Complemental strand, 3191107 - 3191059
Alignment:
Q  11 tatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||| ||| |||||||||||||||||||||||| || |||| |||||||    
T  3191107 tatctatagggattgtcgtttcgtccaaacaattcgtgttatttatttt 3191059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Original strand, 9245223 - 9245279
Alignment:
Q  2 agagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    ||||||||||||||| | |||||||| ||||||  ||||||| || |||||||||||    
T  9245223 agagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttacttattt 9245279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13277544 - 13277604
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| |||||||| |||||| |  |||| |||||||||    
T  13277544 tagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttg 13277604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 217 - 257
Target Start/End: Original strand, 13277755 - 13277795
Alignment:
Q  217 tcacatttagttatcttaagtagactatacaagtgatgaga 257  Q
    ||||||||| |||||||| |||||||||||||||| |||||    
T  13277755 tcacatttatttatcttaggtagactatacaagtggtgaga 13277795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 218 - 266
Target Start/End: Original strand, 13418786 - 13418834
Alignment:
Q  218 cacatttagttatcttaagtagactatacaagtgatgagaacattgaga 266  Q
    ||| |||| |||||||| |||||||||||||||||||||  ||||||||    
T  13418786 cacgtttatttatcttaggtagactatacaagtgatgaggccattgaga 13418834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 95; Significance: 2e-46; HSPs: 47)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 4 - 301
Target Start/End: Complemental strand, 25121281 - 25120984
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt--ttgaacaattaaaacaaataaaagagttgag-gcttagggatt 100  Q
    ||||||||||||| ||||||||| |||||||||||||||| ||||||||||||||  ||  | ||   ||| |||||||||||||||| | | |  ||||    
T  25121281 agtatcgtatccacaaggattgtggtttcgtccaaacaattcgcgttacttatttggttttaaaa---aaataaataaaagagttgagtgataatagatt 25121185  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 200  Q
    ||||||| ||||||||| ||||| ||||||||||| |||||| ||| ||||||||||| |||||||| ||||||| ||||| | |||||| ||||||||     
T  25121184 gcaatttctatctgtttgcaacagagcaagttacccgttttgattgcagaaaagtaagcagcggttaggattcttcgaatc-cccctattcatttgttga 25121086  T
Q  201 aattaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgagaacattgagatttatctaacctagtcggtttgttgagttgca 298  Q
     ||||||||||||||||  |||| || |||||||||||||||||||  ||||||||||  | ||| ||| | ||||||||| |||||| ||  |||||||    
T  25121085 cattaaataacattcatgccacactttgttatcttaagtagactatctaagtgatgaggtcgttgggatgt-tctaacctaatcggttcgtcaagttgca 25120987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 74 - 312
Target Start/End: Complemental strand, 19374797 - 19374558
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    |||| |||||||||| |  ||| |||||||| |||||| ||||| || ||||||||||||||||||||||||| ||||| ||||| |  ||||| |||||    
T  19374797 aaatgaaagagttgaaggatagagattgcaaattttatatgtttgcagcaaagcaagttacctgttttggttgcagaaatgtaagcattggttaggattc 19374698  T
Q  174 tttgaatctctcctatttatttgttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgagaacattgagatttat 271  Q
    |||| ||| | | |||| |||||||||||||||||||||||||  ||||||||||||||| ||||||||||||  |||||| |||    ||| ||| | |    
T  19374697 tttgtatcgcccttattcatttgttggaattaaataacattcatgtcacatttagttatcctaagtagactatctaagtgaggagtcggttgggatgt-t 19374599  T
Q  272 ctaacctagtcggtttgttgagttgcacctactaatcgcac 312  Q
    |||||||| |||||| ||| ||||||||||| | |||||||    
T  19374598 ctaacctaatcggttcgttaagttgcacctattgatcgcac 19374558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 1 - 151
Target Start/End: Complemental strand, 21323933 - 21323784
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttga-ggcttagggat 99  Q
    |||||||||||||||| |  ||||||||||||||||||||||| |||||||||||||||||||||||  |||  |||||||||||||| || | || |||    
T  21323933 tagagtatcgtatccacatagattgtcgtttcgtccaaacaattcgcgttacttatttttgaacaat--aaaataataaaagagttgagggataagagat 21323836  T
Q  100 tgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaa 151  Q
    | |||||||||||| ||| ||||| |||||||||||||||||||||| ||||    
T  21323835 tacaatttttatctatttgcaacagagcaagttacctgttttggttgcagaa 21323784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 74 - 257
Target Start/End: Original strand, 19092409 - 19092595
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||| | ||  |||| ||||||||||||||||||||| ||||| || || |||||||||||||||  ||||||||||  |||||||| || ||    
T  19092409 aaataaaagagataagagttagagattgcaatttttatctgtttacaacagagtaaattacctgttttggttacagaaaagtaaatagcggttaggactc 19092508  T
Q  174 tttgaatctctcctattta-tttgttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgaga 257  Q
    |||| ||| | | |||||| ||| ||||| ||||||||||||||  |  | |||||||| |||||||||||||||||||||||||||    
T  19092509 tttgcatcccccatatttattttattggatttaaataacattcatgttgcgtttagttaacttaagtagactatacaagtgatgaga 19092595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 1 - 177
Target Start/End: Original strand, 17672043 - 17672219
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||| ||||||| | ||||||| |||||||| ||||||  |||||||||||||||     ||  | |  ||||||||||||| | | |||| ||||    
T  17672043 tagagtattgtatccacatggattgttgtttcgtctaaacaactcgcgttacttattttaagttaacgatataaaataaaagagttaaaggttagagatt 17672142  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttg 177  Q
    ||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||||||||||| |||| |||| ||||    
T  17672143 gcaatttttatctgtttgcaacagagcaagttacctggtttggttgcagaaaagtaagaagcagttaggattatttg 17672219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 28 - 256
Target Start/End: Original strand, 5679273 - 5679505
Alignment:
Q  28 gtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagc 127  Q
    |||||||||||||||| |||||||||||||||     ||  | |  ||||||||||||| ||| ||||  ||||||||||||||||||||  |||| |||    
T  5679273 gtttcgtccaaacaattcgcgttacttattttaagttaacgatataaaataaaagagttaagggttagacattgcaatttttatctgtttgtaacagagc 5679372  T
Q  128 aagttacctgttttggttg-tagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttggaattaaataacattca--tcacatt 223  Q
    |||||||||  ||||||||  | ||||||||| |||  ||| || ||||||||||   |||||||| ||||||||||||||||||||||||  || | ||    
T  5679373 aagttacct-atttggttgcaaaaaaagtaagcagccattaggactctttgaatcctccctatttattttgttggaattaaataacattcatgtcgcgtt 5679471  T
Q  224 tagttatctt-aagtagactatacaagtgatgag 256  Q
    |||||||||| ||||||||||||||||| |||||    
T  5679472 tagttatcttaaagtagactatacaagtaatgag 5679505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 4 - 210
Target Start/End: Complemental strand, 26115959 - 26115755
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagg-gatt-g 101  Q
    ||||||||||||||||||||||||| ||| |||||||||| ||  |||||||||||   | ||| |||  | ||||||||||| ||| ||| | |||| |    
T  26115959 agtatcgtatccataaggattgtcgattcttccaaacaattcgttttacttatttt---aaaataaaataatataaaagagtttagggttaagagatttg 26115863  T
Q  102 caatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgga 201  Q
    |||||||||||||||| ||||| || ||||||||||||||||||| | ||| || || |||||||| |||||||  |||| | |||||| ||||||| ||    
T  26115862 caatttttatctgtttgcaacagagtaagttacctgttttggttgcataaatgttagcagcggttaggattcttcaaatc-cccctattcatttgttcga 26115764  T
Q  202 attaaataa 210  Q
    |||||||||    
T  26115763 attaaataa 26115755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 14649008 - 14649190
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgatt 172  Q
    ||||||||||  | ||| |||| |||| |||||||||||||||| ||||| |||||||||| || ||||||||||||||||| ||  | |||||| || |    
T  14649008 aaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaagttacttgtttttggttgtagaaaaggaaacaacggttaggact 14649107  T
Q  173 ctttgaatctctcctatttat-ttgttgga-attaaataacattc--atcacatttagttatcttaagtagactatacaagtga 252  Q
    ||||||||| | ||| ||||| |||||||| | ||||||||||||   || | |||||||||||||| ||||||||||||||||    
T  14649108 ctttgaatc-cccctgtttatattgttggataataaataacattctagtcgcgtttagttatcttaactagactatacaagtga 14649190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 213
Target Start/End: Original strand, 13908895 - 13909110
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttag---gg 97  Q
    |||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||| | | ||  |  | |||||||   | | | ||||   |     
T  13908895 tagagtatcgtatccacaaggattgtcgtttcgtccaaacaattcgtgttacttatttttgta-attttgacgatataaaag---taaaggttagaaagt 13908990  T
Q  98 attgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-t 194  Q
     ||||||||||||||||||| ||||| |||||| ||||||| ||||||||| | ||||||||| |||||||| ||||||||||||| | | | ||||| |    
T  13908991 cttgcaatttttatctgtttgcaacagagcaagtttacctgtttttggttgcaaaaaagtaagcagcggttaggattctttgaatcccccttgtttatat 13909090  T
Q  195 tgttgga-attaaataacat 213  Q
    ||||||| ||||||||||||    
T  13909091 tgttggatattaaataacat 13909110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 146
Target Start/End: Complemental strand, 12578324 - 12578179
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| | |||||||||||| |||||||||||  ||||| ||||||||      |  | |  ||||||||||||  ||| |||| ||||    
T  12578324 tagagtatcgtatccacatggattgtcgttttgtccaaacaatttgcgtttcttattttaagttgacgatataaaataaaagagtaaagggttagagatt 12578225  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttg 146  Q
     |||||||||||||||| ||||| ||||||||||||||||||||||    
T  12578224 acaatttttatctgtttgcaacagagcaagttacctgttttggttg 12578179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 74 - 166
Target Start/End: Complemental strand, 17951281 - 17951189
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggtt 166  Q
    ||||||||||||   || |||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||| ||| |||||||    
T  17951281 aaataaaagagtgacgggttagagattgcaatttttatctgtttgcaacagagcaagttacctgatttggttgcagaaaagcaagcagcggtt 17951189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 2 - 158
Target Start/End: Original strand, 15164809 - 15164964
Alignment:
Q  2 agagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttaggga-tt 100  Q
    ||||||||||||||| | |||||||| |||||||||||||||  |||||||||||||||| | | ||  |  | |||||  |||| ||| |||| || ||    
T  15164809 agagtatcgtatccacagggattgtcatttcgtccaaacaatttgcgttacttatttttgta-agtttgacgatataaa--agttaagggttagagagtt 15164905  T
Q  101 gcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaag 158  Q
    ||||||||||| ||||| ||||| |||||| |||||||||||||||| |||||||||||    
T  15164906 gcaatttttatttgtttgcaacagagcaagtttacctgttttggttgcagaaaagtaag 15164964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 7582338 - 7582598
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||||||| |||||| | ||||||| ||||||||||||||||  || ||||||||||| | | | ||  |  | ||||||||    |||||||||  ||    
T  7582338 tagagtatcatatccacatggattgttgtttcgtccaaacaatctgcattacttattttggta-agtttgacgatataaaagataaaaggcttaggattt 7582436  T
Q  101 gcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgt 197  Q
    |||||||| |||||||| ||| | | |||||| ||||||||| ||||| |||||| |||| || ||||| ||||||||||||| |  || ||||| ||||    
T  7582437 gcaattttcatctgtttgcaatagaacaagtttacctgtttttggttgcagaaaaataagcagtggttaggattctttgaatcccctctgtttatattgt 7582536  T
Q  198 tgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||| ||||||||||| | ||  ||| |||| |||||||| |||||||||||||| ||||||    
T  7582537 tggatattaaataacagtaatatcacgtttatttatcttaggtagactatacaagagatgag 7582598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 17337193 - 17336933
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaa--aacaaataaaagagttgaggcttaggga 98  Q
    |||||||||||||||| |  ||||||| |||||||||||||||  |||||||||||||||    | || |  |   |||||||||||  ||| || | ||    
T  17337193 tagagtatcgtatccaaagagattgtcatttcgtccaaacaatttgcgttacttattttt----agttgacgatataataaaagagtaaagggtttgaga 17337098  T
Q  99 tt-gcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-t 194  Q
    || ||||||||||||||||| ||||| |||||| ||||||| ||||||||| | ||||||||| || | ||||||||||| ||||| | | ||||||| |    
T  17337097 tttgcaatttttatctgtttacaacagagcaagtttacctgtttttggttgcataaaagtaagcagagattatgattcttcgaatcccccttatttatat 17336998  T
Q  195 tgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || |||| ||||||||||| | |  || | || | |||||||| |||||||||||||||||||||    
T  17336997 tgatggatattaaataacagtaatgtcgcgttcatttatcttaggtagactatacaagtgatgag 17336933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 74 - 163
Target Start/End: Complemental strand, 17955133 - 17955044
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcg 163  Q
    ||||||||||||   || |||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||| ||| ||||    
T  17955133 aaataaaagagtgatgggttagagattgcaatttttatctgtttgcaacagagcaagttacctgatttggttgcagaaaagcaagcagcg 17955044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 16730457 - 16730397
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| ||||||| |||||||||||||||||  |||||||||||||||||    
T  16730457 tagagtatcgtatccaaaaggattttcgtttcgtccaaacaactcgcgttacttatttttg 16730397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 19492758 - 19492698
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| ||| ||||||||||| |||||||||| |||||||||||||||||    
T  19492758 tagagtatcgtatccacaagaattgtcgtttcatccaaacaattcgcgttacttatttttg 19492698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 106 - 181
Target Start/End: Original strand, 12761390 - 12761465
Alignment:
Q  106 ttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||| ||||| |||||||||||||||||||||||||||| |  || || || ||||||||||||||||||||||    
T  12761390 ttttatttgtttgcaacaaagcaagttacctgttttggttgcaacaatgttagcagcggttatgattctttgaatc 12761465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 13128932 - 13128873
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||| ||||||||| |||||||||||||||||||||||  ||||||||||||||||    
T  13128932 tagagtattgtatccatagggattgtcgtttcgtccaaacaactcgcgttacttattttt 13128873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 11490573 - 11490694
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| | ||||||| ||||| |||||||||| ||||||||||||||| |    |  | |  ||||||||||||| ||  |||| ||||    
T  11490573 tagagtatcgtatccacagggattgtagtttcttccaaacaattcgcgttacttattttagtttgacgatataaaataaaagagtt-agtgttagagatt 11490671  T
Q  101 gcaatttttatctgttttcaaca 123  Q
    |||||||||||||||||||||||    
T  11490672 gcaatttttatctgttttcaaca 11490694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 167
Target Start/End: Original strand, 17216958 - 17217027
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaagaagcggtta 167  Q
    ||||||||||||||||||| ||||| |||||| |||| ||||||||||||||||||||||| | ||||||    
T  17216958 ttgcaatttttatctgtttgcaacagagcaagtttacatgttttggttgtagaaaagtaagcaacggtta 17217027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 19882681 - 19882738
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    |||||||||||||| | | |||||||||||||||||||||||| ||||||||||||||    
T  19882681 tagagtatcgtatcaacatggattgtcgtttcgtccaaacaattcgcgttacttattt 19882738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 131 - 243
Target Start/End: Complemental strand, 22173482 - 22173367
Alignment:
Q  131 ttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttgga-attaaataacattcat--cacatttag 226  Q
    |||| ||||||||||| ||||||||||| ||| ||||||| ||||| |||| | |||||||| ||||||||| ||||||||||| ||||  || ||||||    
T  22173482 ttacatgttttggttgcagaaaagtaagcagcagttatgactctttaaatc-cccctatttattttgttggatattaaataacagtcatgccatatttag 22173384  T
Q  227 ttatcttaagtagacta 243  Q
    |||||||| ||||||||    
T  22173383 ttatcttatgtagacta 22173367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 11521153 - 11520995
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgtt 198  Q
    |||||||||||| |||||| |||||||||||||| ||||||||| ||| || || || ||  | ||||| |||||||||||| ||  ||||| |||||||    
T  11521153 ttgcaatttttacctgtttgcaacaaagcaagttgcctgttttgattgcag-aatgttagcggtggttaggattctttgaatatcctctattcatttgtt 11521055  T
Q  199 ggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    | |||||| ||||| |||  ||||||| | ||||  |||||| |||||  ||||||||||    
T  11521054 gaaattaattaacaatcaagtcacattcaattattctaagtaaactatctaagtgatgag 11520995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 19492673 - 19492510
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    ||||||| ||||| ||||| ||||| |||||||| || |||||| ||||| |||||||||||  ||||||| ||||||| ||||| | ||| ||||| ||    
T  19492673 ttgcaatatttatttgtttgcaacacagcaagtttacatgtttttggttgcagaaaagtaagcggcggttaggattcttcgaatcccccctgtttatatt 19492574  T
Q  196 gttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||| ||||| ||||| | |  || | |||| |||||||| |||||||||||||||||||||    
T  19492573 gttggatattaagtaacagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgag 19492510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 74 - 256
Target Start/End: Complemental strand, 19929660 - 19929473
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgatt 172  Q
    ||||||||||| | ||| |||  |||| |||||||||||||||| ||||| ||||| |||| |||||| ||||| ||||||| ||  | | |||| || |    
T  19929660 aaataaaagagataagggttaaagatttcaatttttatctgtttgcaacagagcaaattacatgtttttggttgcagaaaaggaaacaacagttaggact 19929561  T
Q  173 ctttgaatctctcctatttattt-gttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||| |||  | |||  |||| | |||||| | ||||||||||||||  | | |||||||||||||||||||||||||||||||||||    
T  19929560 ctttaaattccccctgcttatatcgttggataataaataacattcatgtcgcgtttagttatcttaagtagactatacaagtgatgag 19929473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 92 - 286
Target Start/End: Complemental strand, 22357499 - 22357301
Alignment:
Q  92 ttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttgg-ttgtagaaaagtaagaagcggttatgattctttgaatctctcctatt 190  Q
    |||| ||||||||||||||| ||||| ||| | |||||||||| |||||| | ||| ||||||| ||| | || ||| || | |||||||| | ||||||    
T  22357499 ttagagattgcaatttttatttgtttgcaatatagcaagttacttgtttttgattgcagaaaaggaagcatcgtttaggactttttgaatcccccctatt 22357400  T
Q  191 tattt-gttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgagaacattgagatttatctaacctagtcggtt 286  Q
    ||||| |||||| | ||||||| || |||  | | |||||||||||||| |||| ||||||||||||||||   ||||||  | ||||||||||||||||    
T  22357399 tattttgttggataataaataaaatccatgtcgcgtttagttatcttaaatagaatatacaagtgatgagattgttgagacat-tctaacctagtcggtt 22357301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 106 - 212
Target Start/End: Complemental strand, 24639415 - 24639306
Alignment:
Q  106 ttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgttgga- 201  Q
    |||||| ||||| ||||| |||||||| ||||||||| ||||| ||||||||||| || ||||| ||||||||||||| || |||||||| ||||||||     
T  24639415 ttttatttgtttgcaacagagcaagtttacctgttttcggttgcagaaaagtaagcagtggttaggattctttgaatccct-ctatttatattgttggat 24639317  T
Q  202 attaaataaca 212  Q
    |||||||||||    
T  24639316 attaaataaca 24639306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 20315041 - 20315098
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    |||| |||| |||||| ||||||||||||||||||||||||||  |||||||||||||    
T  20315041 tagaatatcatatccacaaggattgtcgtttcgtccaaacaatttgcgttacttattt 20315098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 13692727 - 13692667
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||| |||||| | |||||||||||||| ||||||||| || ||||||||||||||    
T  13692727 tagagtatcatatccacatggattgtcgtttcgaccaaacaattcgtgttacttatttttg 13692667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 216 - 256
Target Start/End: Original strand, 17106852 - 17106892
Alignment:
Q  216 atcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||||| ||||||||||||||||||||||||||||||    
T  17106852 atcacatttatttatcttaagtagactatacaagtgatgag 17106892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 17216858 - 17216918
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||| |||||| | |||||||||||||||||||||||| | |||||||||| ||||    
T  17216858 tagagtatcatatccacatggattgtcgtttcgtccaaacaattctcgttacttatatttg 17216918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 25094692 - 25094776
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacct-gttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||||||| || |||||| ||||||| |||||||||  ||| |||||||| ||||||| |||||    
T  25094692 ttgcaatttttatctgtttgcaacaaagcgaatttacctagttttggatgtagaaaatcaagcagcggttaggattcttagaatc 25094776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 25097959 - 25098043
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||  ||||||||| || ||||||| |||||||||| |||||||| | |||||||| ||||||| |||||    
T  25097959 ttgcaatttttatctgttggcaacaaagcaaatttacctgtttttggttgttgaaaagtatgcagcggttaggattcttcgaatc 25098043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 9052714 - 9052796
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagag 84  Q
    |||||||||||||||  || |||||| |||||  ||||||||| | ||||||||||||| |||||| ||||| |||||||||||    
T  9052714 tagagtatcgtatccgcaaagattgttgtttcaaccaaacaattcacgttacttattttggaacaa-taaaataaataaaagag 9052796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 17709896 - 17709975
Alignment:
Q  103 aatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||| ||||| ||||| |||||||| |||||||||||||| | ||||||||| ||| |||| ||||||| |||||    
T  17709896 aatttttatatgtttgcaacagagcaagtttacctgttttggttgcaaaaaagtaagtagctgttaggattcttcgaatc 17709975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 217
Target Start/End: Original strand, 23644939 - 23645034
Alignment:
Q  125 agcaagttacctgttttggttg-tagaaaagtaagaagcggttatgattctttgaatctctcctatttatt-tgttgga-attaaataacattcat 217  Q
    ||||||||||||||||||||||  | ||||||||| |||| ||| ||||||| |||| || |||||||||| ||||||| ||||||||||| ||||    
T  23644939 agcaagttacctgttttggttgcaaaaaaagtaagcagcgtttaggattcttcgaatttcccctatttattatgttggatattaaataacagtcat 23645034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 23080530 - 23080579
Alignment:
Q  161 gcggttatgattctttgaatctctcctatttatttgttggaattaaataac 211  Q
    ||||||| ||||||||||||| | |||||||||||||||||||||||||||    
T  23080530 gcggttaagattctttgaatccc-cctatttatttgttggaattaaataac 23080579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 98 - 181
Target Start/End: Complemental strand, 19562137 - 19562052
Alignment:
Q  98 attgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||||||||||||| ||| ||||| |||||| ||||||| ||||||||| ||||||||||  ||||||||  |||||| |||||    
T  19562137 attgcaatttttatctctttgcaacagagcaagtttacctgtttttggttgcagaaaagtaatcagcggttagaattcttcgaatc 19562052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 11933461 - 11933517
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||||  ||| | |||||||||||||||||||||||  |||||||||||||||    
T  11933461 gagtatcgtgaccacatggattgtcgtttcgtccaaacaactcgcgttacttatttt 11933517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 160 - 216
Target Start/End: Original strand, 30600037 - 30600093
Alignment:
Q  160 agcggttatgattctttgaatctctcctatttatttgttggaattaaataacattca 216  Q
    |||||||| || ||||  |||||| |||||||||||||||||||||| |||||||||    
T  30600037 agcggttaagactcttcaaatctcccctatttatttgttggaattaattaacattca 30600093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 161 - 212
Target Start/End: Original strand, 9052875 - 9052926
Alignment:
Q  161 gcggttatgattctttgaatctctcctatttatttgttggaattaaataaca 212  Q
    ||||||| ||||||||||||| |  ||||||||| |||||||||||||||||    
T  9052875 gcggttaggattctttgaatcccctctatttattcgttggaattaaataaca 9052926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 13992934 - 13992879
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttat 56  Q
    |||||||||||||||| | ||||| |||||| ||||||||||| || |||||||||    
T  13992934 tagagtatcgtatccacatggattttcgttttgtccaaacaattcgtgttacttat 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 21 - 59
Target Start/End: Complemental strand, 8969760 - 8969722
Alignment:
Q  21 gattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    ||||||||||||||||||||||| || ||||||||||||    
T  8969760 gattgtcgtttcgtccaaacaattcgtgttacttatttt 8969722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 19636644 - 19636586
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||| ||||| ||| ||||||||||||| |||||||||| |  ||||||||||||    
T  19636644 tagagtattgtatctatagggattgtcgtttcatccaaacaattcatgttacttatttt 19636586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 10 - 60
Target Start/End: Original strand, 40227825 - 40227875
Alignment:
Q  10 gtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    ||||||||| | ||||| ||||| |||||||||| ||||||||||||||||    
T  40227825 gtatccataggaattgtagtttcatccaaacaattcgcgttacttattttt 40227875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 17026305 - 17026221
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaag-caagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||| ||||||||||||| ||||| ||  || ||||||| ||||||||| ||| ||||||| |||||||| ||||||| |||||    
T  17026305 ttgcagtttttatctgtttgcaacagagtaaatttacctgtttttggttgcagacaagtaagcagcggttaggattcttcgaatc 17026221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 92; Significance: 1e-44; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 74 - 257
Target Start/End: Original strand, 32085577 - 32085762
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||| ||  |||| ||||||||||||||||||||| ||||| ||||||||||||| |||||||| ||||||||||| |||||||| || ||    
T  32085577 aaataaaagagttaagagttagagattgcaatttttatctgtttgcaacagagcaagttacctggtttggttgcagaaaagtaagcagcggttaggactc 32085676  T
Q  174 tttgaatctctcctattta-tttgttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgaga 257  Q
    ||| |||| | |||||||| ||||||||| ||||||||||||||  || | |||||||||||||||||||| |||||||||||||||    
T  32085677 tttaaatc-cccctatttattttgttggatttaaataacattcatgtcgcgtttagttatcttaagtagacaatacaagtgatgaga 32085762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 5 - 256
Target Start/End: Original strand, 17889981 - 17890235
Alignment:
Q  5 gtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt--ttgaacaattaaaacaaataaaagagttgaggcttaggga-ttg 101  Q
    ||||| ||| |||| ||||||||||||||  ||||||||  |||||| ||||||  || |||||  || | ||||||||||||||| |  || | | |||    
T  17889981 gtatcatattcatagggattgtcgtttcgatcaaacaatttgcgttaattatttggtttaacaa--aatataaataaaagagttgaaggataagaagttg 17890078  T
Q  102 caatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgga 201  Q
    |||||||||| ||||| ||||| |||||||||||||||||||||| ||||| ||||| | || ||| |||||||| |||| | |||||| ||||||||||    
T  17890079 caatttttatatgtttgcaacagagcaagttacctgttttggttgcagaaatgtaagcaacgattaagattctttcaatcccccctattcatttgttgga 17890178  T
Q  202 attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||||||||||  ||   ||||||||||||||||| ||||   ||||||||||    
T  17890179 attaaataacattcatttcgtgtttagttatcttaagtatactacctaagtgatgag 17890235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 98 - 217
Target Start/End: Complemental strand, 23933506 - 23933388
Alignment:
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgt 197  Q
    |||||||||||||||||||| ||||| |||||||||| || |||||||  | ||||||||| |||||||| ||||||||||||| | |||||| |||||     
T  23933506 attgcaatttttatctgtttgcaacagagcaagttacttggtttggtttcacaaaagtaagcagcggttaggattctttgaatc-cccctattcatttgc 23933408  T
Q  198 tggaattaaataacattcat 217  Q
    ||||||||||||||||||||    
T  23933407 tggaattaaataacattcat 23933388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 20174693 - 20174438
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||||||| | |||| | |||||||||||||||||||||||| |  ||||||||||||      || | |  |||||||| |||| ||| |||| ||||    
T  20174693 tagagtatcatttccacatggattgtcgtttcgtccaaacaattcatgttacttattttaagttgatgatataaaataaaatagttaagggttagagatt 20174594  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 200  Q
    | ||||||||||||||| ||||| ||||| ||||||| ||||||   ||||||||||| ||||||||  | |||| ||||| |||   ||| ||| ||||    
T  20174593 ggaatttttatctgtttgcaacagagcaaattacctg-tttggtaaaagaaaagtaagcagcggttagcactcttcgaatccctctatttttttttttgg 20174495  T
Q  201 aattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||||||||  || || |||| |||||||||||||||||||| ||||||||    
T  20174494 aattaaataacattcatgtcgcaattag-tatcttaagtagactatacatgtgatgag 20174438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 4 - 256
Target Start/End: Complemental strand, 25885515 - 25885261
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggattgca 103  Q
    ||||||||||||| ||| ||||||||||||||||||||||  | ||||||||||||    | |  | |  ||||||||||||| ||| ||||  ||| ||    
T  25885515 agtatcgtatccacaagaattgtcgtttcgtccaaacaatttgtgttacttattttattccgacgatataaaataaaagagttaagggttagatatttca 25885416  T
Q  104 atttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttggaa 202  Q
    |||||||||||||   || | || | ||||||||  ||||||||||||||||||| || ||||| || |||||||||  | ||||| || ||||||| ||    
T  25885415 atttttatctgttcggaatagagaaggttacctg-gttggttgtagaaaagtaagcagtggttaggactctttgaattccccctatctattttgttgaaa 25885317  T
Q  203 ttaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||||||| ||  | |||||||||||||| |||  |||||||||||||||||    
T  25885316 ttaaataacatttatgccgcatttagttatctttagttaactatacaagtgatgag 25885261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 45621939 - 45621729
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttat-ttttgaacaattaaaacaaataaaaga-gttgaggcttaggga 98  Q
    |||||||||||||| | |||||||||||||||||||||||||| || ||||||||| |||||||||   |||  |||||||||| | | ||| |||| |     
T  45621939 tagagtatcgtatctacaaggattgtcgtttcgtccaaacaattcgtgttacttattttttgaaca---aaataaaataaaagatgataagggttagagt 45621843  T
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgt 197  Q
    ||| ||||||||||||||| ||||| |||||| |||| ||||||| ||| || || || ||  ||||||| ||||||||||||| |  ||||| ||||||    
T  45621842 ttgtaatttttatctgtttgcaacatagcaagtttacttgttttgattgcag-aatgttagcggcggttaagattctttgaatcccctctattcatttgt 45621744  T
Q  198 tggaattaaataaca 212  Q
    ||||||||| |||||    
T  45621743 tggaattaattaaca 45621729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 99 - 255
Target Start/End: Complemental strand, 27909079 - 27908918
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||| |||||| |||| |||||||| ||||||| ||||| | ||||||||| |||    
T  27909079 ttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttgcagaaaattaagcagcggttaggattcttcgaatcccccctatttatattg 27908980  T
Q  197 ttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatga 255  Q
    ||||| ||||| ||||| | |  |  | |||| |||||||| ||||||||||||||||||||    
T  27908979 ttggatattaagtaacaataatgttgcgtttatttatcttaggtagactatacaagtgatga 27908918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 253
Target Start/End: Complemental strand, 17743534 - 17743278
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttaggga-t 99  Q
    |||||||||||||||| | ||||| |||||||||||||||||| || ||||||||||||||  ||| |  |||  ||| || |||| ||| |||| || |    
T  17743534 tagagtatcgtatccacatggattatcgtttcgtccaaacaattcgtgttacttatttttg--caagtttaac-gatataaaagttaagggttagagagt 17743438  T
Q  100 tgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    |||||||||||||| ||| |||| ||||||| ||||||| ||||||||||||||||| |||  ||||||| |||| ||||||||||  |  ||||| |||    
T  17743437 tgcaatttttatctttttgcaactaagcaagtttacctgtttttggttgtagaaaaggaagccgcggttaggattatttgaatctcctccgtttatattg 17743338  T
Q  197 ttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgat 253  Q
    ||||| |||||||||||   |  |  | ||||||||||||||||||||||| ||||||||    
T  17743337 ttggatattaaataacaacaatgttgcgtttagttatcttaagtagactatgcaagtgat 17743278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 99 - 205
Target Start/End: Original strand, 45553268 - 45553372
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgtt 198  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||| || || || || |||||||| ||||||||||||| | |||||| |||||||    
T  45553268 ttgcaatttttatctgtttgcaacatagcaagttacctgttttggttgcag-aacgttagcagcggttaggattctttgaatc-cccctattcatttgtt 45553365  T
Q  199 ggaatta 205  Q
    |||||||    
T  45553366 ggaatta 45553372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 212
Target Start/End: Complemental strand, 26603320 - 26603205
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||||||||| ||||| ||||  ||||||||||| ||||||||||||||||| |||||||| ||||||| ||||| | ||||||||| |||    
T  26603320 ttgcaatttttatctgtttgcaacagagcagtttacctgtttttggttgtagaaaagtaagcagcggttaggattcttcgaatc-cccctatttatattg 26603222  T
Q  197 ttgga-attaaataaca 212  Q
    ||||| |||||||||||    
T  26603221 ttggatattaaataaca 26603205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 29719289 - 29719031
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataa-aagagttgaggcttaggga- 98  Q
    |||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||    | ||  |    |||| || |  | ||| |||| ||     
T  29719289 tagattatcgtatccacaaggattgtcgtttcgttcaaacaattcgcgttacttattttt----agtttgacggtataataaaatataagggttagagag 29719194  T
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgt-tttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttg 196  Q
    ||||||||||||| ||| | ||||| |||||| |||||||| |||||||| ||||||||||| ||| |||| ||||||| ||||| |  |||||||||||    
T  29719193 ttgcaatttttatatgtatgcaacagagcaagtttacctgtgtttggttgcagaaaagtaagcagcagttaggattcttcgaatcccctctatttatttg 29719094  T
Q  197 tt-ggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || | |||||||||||| | |  || | |||| |||||||| |||||||||||||||||||||    
T  29719093 ttagaaattaaataacagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgag 29719031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 74 - 254
Target Start/End: Original strand, 29027610 - 29027794
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||| | ||| |||| ||||||||||||||||||||| ||| | ||||||| ||||| |||||||| ||||||| ||  | ||||||  | |     
T  29027610 aaataaaagagataagggttagagattgcaatttttatctgtttgcaagagagcaagtgacctgatttggttgcagaaaagaaaacaacggttagaacta 29027709  T
Q  174 tttgaatctctcctatttatt-tgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatg 254  Q
    | ||||||   |||||||||| |||| || | |||||||||||||  || | |||||||||||||||||||||||| ||||||||    
T  29027710 tgtgaatccaccctatttattgtgttagataataaataacattcatgtcgcgtttagttatcttaagtagactataaaagtgatg 29027794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 25887864 - 25887702
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacct-gttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||||||||| ||||| ||||||||||||  ||||||||| ||||||||||  |||| |||||||||||  |||| | ||||||||| |||    
T  25887864 ttgcaatttttatctgtttgcaacagagcaagttacctatttttggttgcagaaaagtaaccagcgattatgattcttcaaatcccccctatttatattg 25887765  T
Q  197 ttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||| |||||||||   | |  || | |||| |||||||| ||||| |||||||||||||||    
T  25887764 ttggatattaaataattgtaatgtcgcgtttatttatcttaggtagattatacaagtgatgag 25887702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 29143088 - 29143171
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| |||||||| |||| ||||||||||||||||||||  |||||||| ||||||| |||||    
T  29143088 ttgcaatttttatctgtttgcaacagagcaagtttacctattttggttgtagaaaagtaaacagcggttaagattcttcgaatc 29143171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 28925660 - 28925743
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||||||||||| || ||||| ||||||| |||||    
T  28925660 ttgcaatttttatttgtttgcaacatagcaagtttacctgttttggttgcagaaaagtaagcagaggttaggattcttcgaatc 28925743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17349397 - 17349455
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||||||||||| || ||||||||||||||||||||| | |||||||||||||||    
T  17349397 tagagtatcgtatccacaaagattgtcgtttcgtccaaacatttcgcgttacttatttt 17349455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 21078684 - 21078473
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagg--ga 98  Q
    |||||||||| ||||| ||||||||||||||||||||||||||   |||| |||||||  |||||| |  || |||| |||||||| ||| ||| |        
T  21078684 tagagtatcgcatccacaaggattgtcgtttcgtccaaacaatttacgttgcttatttgggaacaaat-taataaattaaagagttaagggttaagatat 21078586  T
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgtt 198  Q
    ||||||||||||||| ||| ||| | || ||||||||| ||||||||||| ||  ||  | ||  |||| |||| |||||||| | |||||||| |||||    
T  21078585 ttgcaatttttatctatttgcaatagagaaagttacctattttggttgtataattgttcgtagtagttaggattatttgaatc-cccctatttagttgtt 21078487  T
Q  199 ggaattaaataaca 212  Q
    |||||||| |||||    
T  21078486 ggaattaattaaca 21078473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 25618694 - 25618762
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggtt 166  Q
    ||||||||||||||||||| ||||| || ||||| |||||||||||||| ||||||||||| |||||||    
T  25618694 ttgcaatttttatctgtttgcaacagagaaagtttacctgttttggttgcagaaaagtaagcagcggtt 25618762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 17675589 - 17675427
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||||||||| ||||| |||||| |||||||||||||||| |||||| |||  ||||||||  ||| || ||||  | ||| ||||| |||    
T  17675589 ttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttgcagaaaaataaacagcggttagaatttttcgaattccccctgtttatattg 17675490  T
Q  197 ttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||| ||||| |||||   |  || || ||| |||||||| |||||||||||||||||||||    
T  17675489 ttggatattaagtaacaacaatgtcgcaattatttatcttaggtagactatacaagtgatgag 17675427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 25530574 - 25530657
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| ||| || |||||||||||||||| | || |||||| |||||||| ||||||| |||||    
T  25530574 ttgcaatttttatctgtttgcaacagagcgaatttacctgttttggttgcaaaatagtaagcagcggttaggattcttcgaatc 25530657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 99 - 254
Target Start/End: Original strand, 30411805 - 30411965
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    ||||||||||||||||||| ||||| |||||| |||| || ||||||||| ||||||||||| |||||||| |||| || ||||| | ||| || || ||    
T  30411805 ttgcaatttttatctgtttgcaacagagcaagtttacatgtttttggttgcagaaaagtaagcagcggttaggatttttcgaatc-cccctgttcatatt 30411903  T
Q  196 gttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatg 254  Q
    |||||| || || ||||| | |  || |||||| |||||||| |||||||||||||||||||    
T  30411904 gttggatatcaagtaacaataatgtcgcatttatttatcttaggtagactatacaagtgatg 30411965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 212
Target Start/End: Complemental strand, 11382713 - 11382600
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgt 197  Q
    |||||| |||||||||||| ||||| |||||||||| || |||| |||||||||||||||  |   |||||||||||| |||   | |||||||||||||    
T  11382713 ttgcaaattttatctgtttgcaacagagcaagttacttgttttttgttgtagaaaagtaaacaattgttatgattcttcgaa--ccccctatttatttgt 11382616  T
Q  198 tgga-attaaataaca 212  Q
    |||| |||||||||||    
T  11382615 tggatattaaataaca 11382600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 75 - 167
Target Start/End: Complemental strand, 23011746 - 23011655
Alignment:
Q  75 aataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggtta 167  Q
    |||||||||||| ||| ||||  |||| ||||||||||| ||| ||||| | ||||||||||  |||||||||||||||||||  ||||||||    
T  23011746 aataaaagagttaagggttagatattgaaatttttatctatttccaacatatcaagttacct-atttggttgtagaaaagtaaccagcggtta 23011655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25920307 - 25920367
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| |||||||| |||||| | |||||||||||||||    
T  25920307 tagagtatcgtatccacatggattgtcctttcgtccgaacaattctcgttacttatttttg 25920367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 9774393 - 9774334
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| | |||||||||||| |||||| ||||  |||||||||||||||    
T  9774393 tagagtatcgtatccacatggattgtcgttttgtccaaccaatttgcgttacttattttt 9774334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 12953352 - 12953293
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||| || |||| | |||||||||||||||| ||||||| ||||||||||||||||    
T  12953352 tagagtattgtgtccacatggattgtcgtttcgtcaaaacaattcgcgttacttattttt 12953293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 254
Target Start/End: Original strand, 17349486 - 17349648
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    ||||||||||||||||||| ||||| |||||| |||| || ||||||||| | ||||||||| |||||| |  |||||| ||||| |  |||||||| ||    
T  17349486 ttgcaatttttatctgtttgcaacagagcaagtttacttgtttttggttgcaaaaaagtaagcagcggtcagaattcttcgaatcccctctatttatatt 17349585  T
Q  196 gttgga-attaaataacattca--tcacatttagttatcttaagtag-actatacaagtgatg 254  Q
    |||||| |||||||||||  ||  ||||  ||| |||||||| |||| |||||||||||||||    
T  17349586 gttggatattaaataacagacatgtcactcttatttatcttaggtagtactatacaagtgatg 17349648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25618597 - 25618656
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    ||||||||| |||||| | |||||||||||||||| ||||||| ||||| ||||||||||    
T  25618597 tagagtatcatatccacatggattgtcgtttcgtctaaacaattcgcgtaacttattttt 25618656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 5777260 - 5777314
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    ||||||| ||| ||| |||||||||||||||||||||||| | ||||||||||||    
T  5777260 agtatcgaatctatatggattgtcgtttcgtccaaacaattcacgttacttattt 5777314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 168
Target Start/End: Complemental strand, 9774221 - 9774151
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaagaagcggttat 168  Q
    |||||||| |||| ||||| ||||| |||||| ||| || ||||||||| |||||||||||||||||||||    
T  9774221 ttgcaattgttatatgtttacaacagagcaagcttatctattttggttgaagaaaagtaagaagcggttat 9774151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15339279 - 15339333
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttactta 55  Q
    ||||||||| |||||| | ||||||||||||||||||||||||  ||||||||||    
T  15339279 tagagtatcatatccacatggattgtcgtttcgtccaaacaattagcgttactta 15339333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 103 - 175
Target Start/End: Original strand, 25196153 - 25196226
Alignment:
Q  103 aatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctt 175  Q
    ||||||||| ||||| ||||| |||||||| |||||||||||||| | ||||||||| || ||||| |||||||    
T  25196153 aatttttatatgtttgcaacatagcaagtttacctgttttggttgcaaaaaagtaagcagtggttaggattctt 25196226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 146
Target Start/End: Complemental strand, 17635735 - 17635687
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttg 146  Q
    ||||||||||||||||||| ||||| |||||| ||||||||||||||||    
T  17635735 ttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttg 17635687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 19200191 - 19200135
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||||||||| ||||||||||||||| |||||||||  | | |||||||||||    
T  19200191 gagtatcgtatccacaaggattgtcgtttcatccaaacaactcacattacttatttt 19200135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24090984 - 24090924
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||| ||||||||||| | |||||||| ||||||||||||||| |  ||||||||||||||    
T  24090984 tagaatatcgtatccacatggattgtcctttcgtccaaacaattcttgttacttatttttg 24090924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 25535315 - 25535375
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| |||||||| |||||| |  ||||||||||||||    
T  25535315 tagagtatcgtatccacagggattgtcctttcgtccgaacaattcttgttacttatttttg 25535375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 25920391 - 25920475
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| ||| | || ||||||||| ||||| |||||||| || || | |||||||||||||||||    
T  25920391 ttgcaatttttatctgtttgcaacagagcgattttacctgtttttggttgcagaaaagtgagcagtgattatgattctttgaatc 25920475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 84
Target Start/End: Original strand, 25939201 - 25939280
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagag 84  Q
    ||||||||||||||||||||| |||||||  ||||||||| | |||||||| | |  |||||| ||||| |||||||||||    
T  25939201 agtatcgtatccataaggattttcgtttcaaccaaacaattcacgttacttgtctgagaacaa-taaaataaataaaagag 25939280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30411719 - 30411779
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||| | | |||||||| |||||||| ||||||  ||||||||||||||||    
T  30411719 tagagtatcgtatcaacagggattgtcatttcgtcccaacaatttgcgttacttatttttg 30411779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 25196051 - 25196110
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    ||||||||| |||||| | || ||||| ||||||||||||||| | ||||||||||||||    
T  25196051 tagagtatcatatccacaggggttgtcctttcgtccaaacaattcacgttacttattttt 25196110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 31804860 - 31804705
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    ||||||||||||| ||||| ||| ||||||| || ||||||||| ||||| ||||||||||| ||||||        || |||||   ||||||||| ||    
T  31804860 ttgcaatttttatttgtttgcaataaagcaaatttacctgtttttggttgcagaaaagtaagcagcggt--------ttggaatccaccctatttatatt 31804769  T
Q  196 gttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||| ||||||||||| |||  || | |||| |||||||| |||||||||||||||||||||    
T  31804768 gttggatattaaataacaatcatgtcgcgtttatttatcttaggtagactatacaagtgatgag 31804705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 28606236 - 28606178
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    ||||||||||||||||  ||||||||||||||||| |||||    ||||||||||||||    
T  28606236 tagagtatcgtatccactaggattgtcgtttcgtctaaacagctggcgttacttatttt 28606178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 13776381 - 13776437
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||||||||| |  ||||||| ||||||||||||||  | |||||||||||||    
T  13776381 gagtatcgtatccacatagattgtcatttcgtccaaacaacccacgttacttatttt 13776437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 26603408 - 26603348
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||  ||| |||||||| |||||| ||||||||   |||||||||||||||    
T  26603408 tagagtatcgtatttatatggattgtcttttcgtgcaaacaattgacgttacttatttttg 26603348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 26667359 - 26667419
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | ||||| || |||||| | |||||| | |||||||||||||||    
T  26667359 tagagtatcgtatccacagggattttcctttcgtacgaacaattctcgttacttatttttg 26667419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 27909177 - 27909117
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | || || | ||||| |||||||||| | |||||||||||||||    
T  27909177 tagagtatcgtatccacatgggttattgtttcatccaaacaattcacgttacttatttttg 27909117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29143002 - 29143062
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||| |||||||| | ||||||||  ||||| | |||||| |||||||||||||||||    
T  29143002 tagagtaccgtatccacatggattgtccgttcgttcgaacaattcgcgttacttatttttg 29143062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 92; Significance: 1e-44; HSPs: 61)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 74 - 256
Target Start/End: Complemental strand, 18100998 - 18100813
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||| ||||||| ||| ||||  |||||||||||||||||||| ||||| |||||||||| ||||||||||| ||||||||||| |||||||||||||     
T  18100998 aaatagaagagttaagggttagaaattgcaatttttatctgtttgcaacatagcaagttacatgttttggttgcagaaaagtaagcagcggttatgatta 18100899  T
Q  174 tttgaatctctcctattta-tttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||| | | |||||| ||||||||| ||||||||||| |||  |||| |||||||||||||||||||||||||||||||||||    
T  18100898 tttgaatc-cccgtatttattttgttggatattaaataacagtcatgtcacgtttagttatcttaagtagactatacaagtgatgag 18100813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 256
Target Start/End: Complemental strand, 15808005 - 15807820
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||| | | ||| |||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| |||| |||| ||| |||||    
T  15808005 aaataaaagagttaatggttaaggattgcaatttttatttgtttgcaacagagcaagttaccagttttggttgtagaaaaataagcagcgattaggattc 15807906  T
Q  174 tttgaatctctcctatttatttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||| |  ||||||||| |||||| ||||||||| |||||  ||   |||||||||||||||||||||||||||||||||||    
T  15807905 tttgaatccccactatttattcgttggatattaaataatattcatgtcgtgtttagttatcttaagtagactatacaagtgatgag 15807820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 28008219 - 28008404
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||  ||| |||| ||||||||||||||||||||| ||| | ||||| |||| ||||||||||| ||||||||||| |||||||| |||||    
T  28008219 aaataaaagagtaaaggattagagattgcaatttttatctgtttccaatagagcaaattacttgttttggttgcagaaaagtaagcagcggttaggattc 28008318  T
Q  174 tttgaatctctcctatttatttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||||| ||||||||||||||| | ||||||||||| |||  || | |||| |||||||||||||| |||||||||| ||||    
T  28008319 tttgaatctcccctatttatttgttgtatattaaataacagtcatgtcgcgtttatttatcttaagtagattatacaagtggtgag 28008404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 75 - 256
Target Start/End: Complemental strand, 12012797 - 12012614
Alignment:
Q  75 aataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattct 174  Q
    |||||||||||| ||| |||| ||||||||||||||| ||||| ||||| ||| |||||||||||||||||| | ||||||||  | || ||| ||||||    
T  12012797 aataaaagagttaagggttagagattgcaatttttatttgtttgcaacatagcgagttacctgttttggttgcacaaaagtaaacaacgattaggattct 12012698  T
Q  175 ttgaatctctcctatttatttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    | ||||| | ||||||||||||||||| |||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||    
T  12012697 tcgaatc-cccctatttatttgttggatattaaataacattcatgtcacgtttatttatcttaagtagactatacaagtgatgag 12012614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 22620303 - 22620484
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||||| | |||||| ||||||| ||| ||| | |||||||||||||| |||||| |||  ||||||| ||||||||| |||| ||||    
T  22620303 tagagtatcgtatccataggaattgtcttttcgtctaaataattcacgttacttatttttaaacaataaaataaaataaaggagttgagggttagagatt 22620402  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaa-gtaagaagcggttatgattctttgaatc 181  Q
    ||  ||||||||||||| ||||||| | ||||||||||||||||||||||||| ||||| |||||||| |||||||| ||||    
T  22620403 gccttttttatctgtttgcaacaaatcgagttacctgttttggttgtagaaaatgtaagcagcggttaagattctttaaatc 22620484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 74 - 256
Target Start/End: Complemental strand, 17121486 - 17121302
Alignment:
Q  74 aaataaaagagttgaggcttagg-gattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgatt 172  Q
    |||||||||||||||||  || | ||||||| |||| || ||||| ||| | |||||||||| ||||||||||| ||||||||||| |||||||| ||||    
T  17121486 aaataaaagagttgagggataagagattgcatttttcatttgtttgcaatagagcaagttacttgttttggttgcagaaaagtaagcagcggttaggatt 17121387  T
Q  173 ctttgaatctctcctatttatttgttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||| |||||| |||||||||||||||||||||||||||||||||  || | |||| |||||||||||||| |||  ||||||||||    
T  17121386 cttcgaatct-tcctatttatttgttggaattaaataacattcatgtcgcgtttacttatcttaagtagattatctaagtgatgag 17121302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 24 - 255
Target Start/End: Original strand, 16359934 - 16360168
Alignment:
Q  24 tgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggc--ttagggattgcaatttttatctgttttcaa 121  Q
    ||||||||| ||||| |||  ||||| ||| |||||| ||||||||||  ||||||| ||||| |||   |||| ||||||||||||||| ||||| |||    
T  16359934 tgtcgtttcatccaatcaactcgcgtcactaatttttcaacaattaaattaaataaa-gagttaaggggattagagattgcaatttttatttgtttgcaa 16360032  T
Q  122 caaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttggaattaaataacattcat--ca 219  Q
    ||||||||||||||||||||||||| ||||||| ||| |   |||| || |||  ||||| | |||| |||||||||||||| || ||||||||||  ||    
T  16360033 caaagcaagttacctgttttggttgcagaaaagaaagcataagttaggactctacgaatcccacctagttatttgttggaataaagtaacattcatgcca 16360132  T
Q  220 catttagttatcttaagtagactatacaagtgatga 255  Q
      ||||||||||||||||||||||||||||| ||||    
T  16360133 tgtttagttatcttaagtagactatacaagtaatga 16360168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 33190791 - 33190975
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    |||||||| |||| ||| |||| ||||| ||||||||| ||||| |||||  |||||||||||| |||| ||| ||||||||||| |||||||| |||||    
T  33190791 aaataaaatagttaaggtttagagattgtaatttttatttgtttgcaacagtgcaagttacctggtttgattgcagaaaagtaagcagcggttaggattc 33190890  T
Q  174 tttgaatctctcctattta-tttgttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||| ||| || ||||||| ||||||  | || |||||||||||  || ||||||||||||||||||||  |||||||||||||||    
T  33190891 tttggatccct-ctatttattttgtttaatttcaataacattcatgtcgcatttagttatcttaagtaggttatacaagtgatgag 33190975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 24281391 - 24281573
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattc 173  Q
    ||||||||||||  ||| |||| ||||||||||| |||||||||  |||| || ||||||| ||||| ||||||||||||||| | ||| |||| ||  |    
T  24281391 aaataaaagagtaaagggttagagattgcaatttctatctgtttgaaacagagaaagttacatgttt-ggttgtagaaaagtatgcagcagttaggacac 24281489  T
Q  174 tttgaatctctcctatttattt-gttggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||| | |  |||||||||| ||||||||||||||||||||||  | | ||||||||||||||||||||||| |||||||||||    
T  24281490 tttgaacccc--ctatttattttgttggaattaaataacattcatgtcccgtttagttatcttaagtagactatgcaagtgatgag 24281573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 21 - 181
Target Start/End: Complemental strand, 32383047 - 32382886
Alignment:
Q  21 gattgtcgtttcgtccaaacaatacgcgttacttatttttg-aacaattaaaacaaataaaagagttgaggctt-agggattgcaatttttatctgtttt 118  Q
    |||||||||||||||||||||||  | ||||| |||||||  |||||| |||| ||||||||||||||| | || ||  ||||||||||||||||||||     
T  32383047 gattgtcgtttcgtccaaacaatttgtgttacctatttttttaacaat-aaaataaataaaagagttgaaggttgagatattgcaatttttatctgtttg 32382949  T
Q  119 caacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||| ||||| |||||||||||||||| ||||| || || ||| |||| |||||||||||||    
T  32382948 caacagagcaaattacctgttttggttgcagaaatgttagcagccgttaggattctttgaatc 32382886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 98 - 257
Target Start/End: Original strand, 22664345 - 22664508
Alignment:
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcc-tattta-ttt 195  Q
    |||||||||||||| |||||  |||| |||||||||| ||||||||||| ||||||||||| |||||||| || |||||||||| |||| |||||| |||    
T  22664345 attgcaatttttatttgtttgtaacagagcaagttacatgttttggttgcagaaaagtaagtagcggttaggactctttgaatc-ctccgtatttatttt 22664443  T
Q  196 gttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgaga 257  Q
     ||||| ||||||||||||| |  |||  ||||||||||||| ||||||||||||||| ||||||    
T  22664444 attggatattaaataacatttatgtcatgtttagttatcttaggtagactatacaagtaatgaga 22664508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 129 - 256
Target Start/End: Complemental strand, 25961094 - 25960966
Alignment:
Q  129 agttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttggaattaaataacattca--tcacattta 225  Q
    |||||||||||| ||||| |||||||||||||||||||| || |||||||||| | |||||||| ||||||||||||||||||||||||  ||   |||     
T  25961094 agttacctgttt-ggttgcagaaaagtaagaagcggttaggactctttgaatc-cccctatttattttgttggaattaaataacattcatgtcgtgtttc 25960997  T
Q  226 gttatcttaagtagactatacaagtgatgag 256  Q
    |||||||||||||||||||||||||| ||||    
T  25960996 gttatcttaagtagactatacaagtgttgag 25960966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 9401546 - 9401806
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg-aacaattaaaacaaataaaagagttgaggcttaggga- 98  Q
    |||||||||||||||| | | |||||||||||||||||||||| ||||||||||||||||| ||    |  |   |||||||||  | | | |||| ||     
T  9401546 tagagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgcgttacttatttttgtaagttgttgatataataaaaga--taacggttagagag 9401643  T
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||||||||| ||||| || ||| |||||||||||||||  | ||||||||| |||||||| ||||||| ||||| |  |||||||| |||    
T  9401644 ttgcaatttttatctgtttgcaacagagtaagtttacctgttttggttacaaaaaagtaagtagcggttaggattcttcgaatcccctctatttatattg 9401743  T
Q  197 ttgga-attaaataacattc--atcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    | ||| |||||||||||  |  ||| | |||| |||||||||||||||||||| |||||||||    
T  9401744 taggatattaaataacagacatatcgcgtttatttatcttaagtagactatacgagtgatgag 9401806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 29242645 - 29242730
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctc 183  Q
    ||||||||||||||||||| ||||| |||||||| |||||||||||||| | |||||||||||||||||| ||| |||||||||||    
T  29242645 ttgcaatttttatctgtttgcaacagagcaagtttacctgttttggttgcaaaaaagtaagaagcggttaggatactttgaatctc 29242730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 31236010 - 31235847
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    ||||||||||||||| ||| ||||| |||||||| || |||||| ||||| | ||||||||| | |||||| ||||||||||||  |  |||||||| ||    
T  31236010 ttgcaatttttatctctttgcaacagagcaagtttacttgtttttggttgcataaaagtaagcaacggttaagattctttgaattccctctatttatatt 31235911  T
Q  196 gttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||| ||||||||||| ||||  |||||||| |||||||  |||||||||||||||||||||    
T  31235910 gttggatattaaataacagtcatgtcacatttatttatctttggtagactatacaagtgatgag 31235847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 99 - 256
Target Start/End: Original strand, 17359299 - 17359462
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    |||||||||||||||| |  ||||| ||||| || ||||||||| ||||| | |||||||||| ||||||| ||||||| ||||| |  |||||||| ||    
T  17359299 ttgcaatttttatctgctggcaacatagcaaatttacctgtttttggttgcataaaagtaagatgcggttaggattcttcgaatcccctctatttatatt 17359398  T
Q  196 gttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||| ||||||||||| ||||  | | |||| |||||||| |||||||||||||||||||||    
T  17359399 gttggatattaaataacaatcatgtcgcgtttatttatcttaggtagactatacaagtgatgag 17359462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 18825782 - 18825865
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||||||||| || || ||||||||||||||||||||||| |||| | | |||||||||||||    
T  18825782 ttgcaatttttatctgtttacaacaaagcaaatttacttgttttggttgtagaaaagtaagcagcgataaggattctttgaatc 18825865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 102 - 253
Target Start/End: Original strand, 21449218 - 21449375
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgtt 198  Q
    |||||||||||||||| ||||| |||||||| | ||||||| || || ||||||||||| |||||||| ||||||| ||||| ||||| ||||| |||||    
T  21449218 caatttttatctgtttgcaacatagcaagtttaactgtttttggatgcagaaaagtaagcagcggttaggattcttcgaatccctcctgtttatattgtt 21449317  T
Q  199 gga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgat 253  Q
    ||| ||||| ||||||  |  |||| |||| |||||||| ||||||||||||| ||||    
T  21449318 ggatattaagtaacatatatgtcacgtttatttatcttaggtagactatacaaatgat 21449375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 283
Target Start/End: Complemental strand, 17610314 - 17610027
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttag--gga 98  Q
    |||||||||||||||| | |||||||||||||||||||||||| | ||||||||||||||| | | ||  |  | |||||  |||| | | ||||   |     
T  17610314 tagagtatcgtatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttgta-agtttgacgatataaa--agttaaaggttagaaagc 17610218  T
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    ||| ||||||||| ||||| ||||| |||||| ||||||| ||||||||| ||||||||||| |||||||| ||||||||||| | | ||| ||||| ||    
T  17610217 ttgtaatttttatatgtttgcaacagagcaagtttacctgtttttggttgcagaaaagtaagcagcggttaggattctttgaaacccccctttttatatt 17610118  T
Q  196 gtt-ggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgagaacattgagatttatctaacctagtcg 283  Q
    ||| |  |||||||||||   |  || | |||| |||||||| ||||||||||||||||||| |  | ||| ||| | |||||||||||||    
T  17610117 gttagttattaaataacagcaatgtcccgtttatttatcttaggtagactatacaagtgatgcggtcgttgggatgtttctaacctagtcg 17610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 127 - 256
Target Start/End: Original strand, 24214705 - 24214832
Alignment:
Q  127 caagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttgga-attaaataacattcatcacattt 224  Q
    ||||||||||| |||||||| |||||| |||| |||||||| || |||||||||| | |||||||| ||||||||| |||||||||||    || | |||    
T  24214705 caagttacctggtttggttgcagaaaaataagtagcggttaggactctttgaatc-cccctatttattttgttggatattaaataaca---gtcgcgttt 24214800  T
Q  225 agttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||||||||||||  ||||||||||    
T  24214801 agttatcttaagtagactattgaagtgatgag 24214832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 16787784 - 16787634
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggctt-aggga- 98  Q
    ||||||||||||| || |  ||||||||||| | |||||||||  ||||||||||||||||||||||   || | ||| ||||||| ||| || || ||     
T  16787784 tagagtatcgtattcacatagattgtcgttttgcccaaacaatttgcgttacttatttttgaacaat---aaaatatataagagtttagggttaagagat 16787688  T
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaa 152  Q
    ||||||||||||| ||||| ||||| ||||| |||| ||||||||||| |||||    
T  16787687 ttgcaatttttatatgtttgcaacatagcaaattacttgttttggttggagaaa 16787634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 103 - 180
Target Start/End: Complemental strand, 16069518 - 16069440
Alignment:
Q  103 aatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaat 180  Q
    |||||||||||| || ||||| |||||||| |||||||||||||||||||||||||| ||| |||| ||||||| ||||    
T  16069518 aatttttatctgcttgcaacagagcaagtttacctgttttggttgtagaaaagtaagcagcagttaggattcttcgaat 16069440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Complemental strand, 25405685 - 25405628
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||||||| |||||||||||||||||||||||| | | |||||||||||||||    
T  25405685 agtatcgtatccacaaggattgtcgtttcgtccaaacagttcacgttacttatttttg 25405628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 155
Target Start/End: Complemental strand, 51473934 - 51473780
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagtt-gaggcttaggga- 98  Q
    |||||||||||||||||| |||||||||||| |||||||||||  ||||||||| |||||   | |   ||  |||||||||||||  | | |||| ||     
T  51473934 tagagtatcgtatccatatggattgtcgttttgtccaaacaatttgcgttacttgtttttagtcga--caataaaataaaagagttaaaaggttagagat 51473837  T
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagt 155  Q
    ||||||||||||||||||| ||||| | ||||||| || ||||||||| ||||||||    
T  51473836 ttgcaatttttatctgtttgcaacatatcaagttatctattttggttgcagaaaagt 51473780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 12208642 - 12208702
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||| |||| |||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  12208642 tagaatatcatatccacatggattgtcgtttcgtccaaacaattcgcgttacttatttttg 12208702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 13345394 - 13345136
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt----ttgaacaattaaaacaaataaaagagttgaggcttagg 96  Q
    ||||||||| |||||| | |||||||||||| ||||||||||| ||||||||||||||    ||  || ||      ||||||||||||| | | |||      
T  13345394 tagagtatcatatccacatggattgtcgttttgtccaaacaattcgcgttacttatttatagtttgacgat-----aaaataaaagagttaaaggttaaa 13345300  T
Q  97 ga-ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-t 194  Q
    || ||||| ||||||||| |||  |||| ||| |||||||||||||||||  ||||||||||  |||||||| |||| || ||||| | ||||||||| |    
T  13345299 gatttgcagtttttatctatttaaaacatagc-agttacctgttttggtttaagaaaagtaaacagcggttaggatttttcgaatcccccctatttatat 13345201  T
Q  195 tgttgga-attaaataaca--ttcatcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||| |||||||||||   |  || | |||| |||||||| |||| ||||||||||||||||    
T  13345200 tgttggatattaaataacaatattgtcgcgtttatttatcttaggtagtctatacaagtgatgag 13345136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 193 - 254
Target Start/End: Original strand, 21847814 - 21847877
Alignment:
Q  193 tttgttggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtgatg 254  Q
    ||||||| |||||||||||||||||  | | |||||||||||||||||||||||||||||||||    
T  21847814 tttgttgaaattaaataacattcatgtcgcgtttagttatcttaagtagactatacaagtgatg 21847877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 29242560 - 29242620
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||||||||||||  |||||||||||| |||||||||| |||||||| ||||||||    
T  29242560 tagagtatcgtatccatagtgattgtcgtttcatccaaacaattcgcgttacatatttttg 29242620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 198
Target Start/End: Original strand, 34481108 - 34481207
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcc-tatttatttgt 197  Q
    ||||||||||||| |||||  |||||||||||||||||||||| |||||| ||| || || |||||| |  ||||||||||| ||||| |||||||||||    
T  34481108 ttgcaatttttatatgtttggaacaaagcaagttacctgtttttgttgtaaaaatgttagtagcggtcagtattctttgaat-tctccttatttatttgt 34481206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 21666666 - 21666607
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| | |||||||| ||||||||||||||| | ||||||||||||||    
T  21666666 tagagtatcgtatccacatggattgtcctttcgtccaaacaattctcgttacttattttt 21666607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 105 - 193
Target Start/End: Original strand, 12208746 - 12208835
Alignment:
Q  105 tttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat 193  Q
    |||| |||||||| ||||| |||||||| ||||||||| | || ||||||||||| |||||||| ||||||| ||||| | |||||||||    
T  12208746 ttttaatctgtttgcaacagagcaagtttacctgttttagctgcagaaaagtaagcagcggttaggattcttcgaatcccccctatttat 12208835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 3 - 60
Target Start/End: Original strand, 17359205 - 17359262
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    ||||||| ||||||||| ||||||||||||||||||| ||| | ||||||||||||||    
T  17359205 gagtatcatatccataaagattgtcgtttcgtccaaataattctcgttacttattttt 17359262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 21847674 - 21847795
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt--ttgaacaattaaaacaaataaaagagttgaggcttaggga 98  Q
    |||||||| ||||||| | |||||||||||||||||||||||| | |||||||||| |  || |||||  ||   ||||||||||||||| |  ||| ||    
T  21847674 tagagtattgtatccacatggattgtcgtttcgtccaaacaattcacgttacttatctggtttaacaa--aattaaaataaaagagttgaaggatagaga 21847771  T
Q  99 ttgcaatttttatctgttttcaac 122  Q
    ||||||||||||| ||||| ||||    
T  21847772 ttgcaatttttatttgtttgcaac 21847795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16179048 - 16179108
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| |||||  ||||||||||||||||||| |  ||||||||||||||    
T  16179048 tagagtatcgtatccaaaaggaaagtcgtttcgtccaaacaattcttgttacttatttttg 16179108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21449130 - 21449190
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| |||||||||||||||| |||||||||    ||||||||||||||    
T  21449130 tagagtatcgtatccacaaggattgtcgtttcggccaaacaatttatgttacttatttttg 21449190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 130 - 248
Target Start/End: Complemental strand, 15813471 - 15813350
Alignment:
Q  130 gttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatt-tgttgga-attaaataacattca--tcacattta 225  Q
    ||||||||||||||||| ||||||||||| ||| ||||  |||||| ||||| | |||||||||| ||||| | |||||||||||||||  || | ||||    
T  15813471 gttacctgttttggttgcagaaaagtaagcagcagttagtattcttagaatc-cccctatttattatgttgtatattaaataacattcatgtcgcgttta 15813373  T
Q  226 gttatcttaagtagactatacaa 248  Q
     ||||||||  ||||||||||||    
T  15813372 tttatcttagatagactatacaa 15813350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 16916991 - 16916932
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| | |||||||| |||||||| |||||| | ||||||||||||||    
T  16916991 tagagtatcgtatccacagggattgtcctttcgtccgaacaattctcgttacttattttt 16916932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 103 - 181
Target Start/End: Complemental strand, 21666565 - 21666486
Alignment:
Q  103 aatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||| ||| | | |||||| |||||||||||||||||||||||||| |  ||||| ||||||| |||||    
T  21666565 aatttttatctgtttgcaagacaacaagtttacctgttttggttgtagaaaagtaagcaatggttaggattcttcgaatc 21666486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 9787846 - 9787756
Alignment:
Q  92 ttagggattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||| |||||||||||| | |||||| ||||| ||||||| ||||| ||||||||| |||||||||||  |||||||  | ||||||||||    
T  9787846 ttagagattgcaattttgaactgtttgcaacagagcaagtgacctgtttttggttgcagaaaagtaagttgcggttagaactctttgaatc 9787756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 201
Target Start/End: Complemental strand, 15813116 - 15813012
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgt-tttggttgtagaaaagtaagaagcggt--tatgattctttgaatctctcctatttattt 195  Q
    ||||||||||||| ||||| ||||| |||||||||||||| |||| ||| | ||||||||  ||||||   ||||||||| ||||| | |||||||||||    
T  15813116 ttgcaatttttatatgtttccaacatagcaagttacctgtctttgcttgcaaaaaagtaa-cagcggtcagatgattcttcgaatcacacctatttattt 15813018  T
Q  196 gttgga 201  Q
    ||||||    
T  15813017 gttgga 15813012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 16112086 - 16112120
Alignment:
Q  222 tttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||||||||||||||||||||||||||||||    
T  16112086 tttagttatcttaagtagactatacaagtgatgag 16112120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 18529149 - 18529083
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggtta 167  Q
    |||||||||||  ||| ||||| |||||||| |||||||||||||||||||||||||| || |||||    
T  18529149 caatttttatcaatttgcaacagagcaagtttacctgttttggttgtagaaaagtaagcagtggtta 18529083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 101 - 199
Target Start/End: Complemental strand, 21973164 - 21973065
Alignment:
Q  101 gcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggtt--atgattctttgaatctctcctatttatttgt 197  Q
    ||||||||||||||||| ||||| | ||||||||||| ||||||||| ||||||||||  |||||||  | ||||||| ||||| | |||||||||||||    
T  21973164 gcaatttttatctgtttgcaacataacaagttacctgtttttggttgcagaaaagtaa-cagcggttagaggattcttcgaatc-cccctatttatttgt 21973067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 3591711 - 3591654
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    |||||||||||||||| |  ||||||||||| ||||||||||| ||| ||||||||||    
T  3591711 tagagtatcgtatccacatagattgtcgttttgtccaaacaattcgccttacttattt 3591654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17837558 - 17837615
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    ||||||||| |||||| |||||||||| ||| ||| ||||||| ||||||||||||||    
T  17837558 tagagtatcatatccacaaggattgtcattttgtctaaacaattcgcgttacttattt 17837615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 105 - 181
Target Start/End: Complemental strand, 21334672 - 21334595
Alignment:
Q  105 tttttatctgttttcaacaaagcaagttacct-gttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||| ||| | ||||||||||||  ||||||||| ||||||||||  |||||||| ||||||| |||||    
T  21334672 tttttatctgtttgcaaaatagcaagttacctatttttggttgaagaaaagtaaacagcggttaggattcttcgaatc 21334595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 22623029 - 22623106
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctt 175  Q
    |||| |||||||| | ||| ||||| |||||||| |||||||||||||| ||||||||||| ||| |||| |||||||    
T  22623029 ttgccatttttatatatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagctgttaggattctt 22623106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 14779606 - 14779666
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||| |||||| | ||||||||||||||||||||||   ||||||| |||||||||    
T  14779606 tagagtatcatatccacagggattgtcgtttcgtccaaacatatcgcgttatttatttttg 14779666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 16179144 - 16179220
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattc 173  Q
    |||||||||||||||| || ||||| |||||||| |||| |||| ||||| ||||||||||| |||||||| |||||    
T  16179144 ttgcaatttttatctgattgcaacagagcaagtttacctatttttggttgcagaaaagtaagcagcggttaggattc 16179220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 16916907 - 16916823
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||| ||| ||||| ||| || ||||||||||| ||||| ||||||||||| ||||| || ||||||| |||||    
T  16916907 ttgcaatttttatctctttgcaacagagcgaatttacctgtttttggttgcagaaaagtaagcagcgggtaggattcttcgaatc 16916823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 61
Target Start/End: Complemental strand, 18736294 - 18736238
Alignment:
Q  5 gtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||| | ||||||||||||||| ||||||||   |||||||||||||||    
T  18736294 gtatcgtatccacagggattgtcgtttcgttcaaacaatttccgttacttatttttg 18736238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 23038068 - 23038012
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||||||||| | |||||||||||||||| ||||||  | |||||||||||||    
T  23038068 gagtatcgtatccacatggattgtcgtttcgtcaaaacaactctcgttacttatttt 23038012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15544024 - 15543965
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    ||||||||||||||||     |||||||||||||||||||||| || |||||||||||||    
T  15544024 tagagtatcgtatccacggaaattgtcgtttcgtccaaacaattcgtgttacttattttt 15543965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 15813582 - 15813523
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||| ||||||| ||||||||||||||| |  ||||||| || |||||||||||||    
T  15813582 tagagtattgtatccacaaggattgtcgtttctttgaaacaattcgtgttacttattttt 15813523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 180
Target Start/End: Complemental strand, 21987955 - 21987872
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaat 180  Q
    ||||||||||||| ||||| ||||| ||||| || ||||||||| ||||| | ||||||||| |||||| | ||||||||||||    
T  21987955 ttgcaatttttatatgtttgcaacagagcaactttacctgtttttggttgcataaaagtaagcagcggtaaggattctttgaat 21987872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 15813208 - 15813155
Alignment:
Q  6 tatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    ||||||||||| ||||||| ||||| |||||||||||  | |||||||||||||    
T  15813208 tatcgtatccacaaggattttcgttgcgtccaaacaactctcgttacttatttt 15813155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 158
Target Start/End: Original strand, 14779704 - 14779764
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaag 158  Q
    ||||||||||||| ||||| ||||| | |||||| || ||||||||||| |||||||||||    
T  14779704 ttgcaatttttatttgtttacaacatatcaagtttacttgttttggttgaagaaaagtaag 14779764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 15543928 - 15543844
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttg-gttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||| ||||| ||||| || ||||| |||||||||  |||| ||||||||||| | |||||| ||||||| |||||    
T  15543928 ttgcaatttttatttgtttgcaacatagtaagtttacctgttttttgttgcagaaaagtaagcaacggttaggattcttcgaatc 15543844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 21988020 - 21987980
Alignment:
Q  21 gattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||| |||||||||| |||| |||||||||||||||||    
T  21988020 gattgtcatttcgtccaatcaattcgcgttacttatttttg 21987980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 220 - 256
Target Start/End: Original strand, 22623157 - 22623193
Alignment:
Q  220 catttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||| |||||||| |||||||||||||||||||||    
T  22623157 catttatttatcttaggtagactatacaagtgatgag 22623193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 44795411 - 44795447
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaa 39  Q
    |||||||||||||| | ||||||||||||||||||||    
T  44795411 gagtatcgtatccacatggattgtcgtttcgtccaaa 44795447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0622 (Bit Score: 89; Significance: 7e-43; HSPs: 1)
Name: scaffold0622
Description:

Target: scaffold0622; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 266
Target Start/End: Original strand, 769 - 1036
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacg-cgttacttatttt----tgaacaattaaaacaaataaaagagttgaggcttag 95  Q
    |||||||| ||||| | |||||||||||||||||||||||||| || |||||||||||||    |||| |  |||||    |||||||||| ||| ||||    
T  769 tagagtattgtatcaacaaggattgtcgtttcgtccaaacaatccgacgttacttattttaagttgaagatataaaa----taaaagagttaagggttag 864  T
Q  96 ggattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tt 194  Q
     |||| ||||||||| |||||| ||||| || ||| |||||| ||||||||||||||| |||| |||||||| || |||||||||| | |||||||| ||    
T  865 agatttcaatttttacctgtttgcaacagagtaagatacctg-tttggttgtagaaaactaagcagcggttaggactctttgaatc-cccctatttattt 962  T
Q  195 tgttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgagaacattgaga 266  Q
    ||||||||||||||||||||||  || | |||| ||||||||| ||||||||| ||||||||||| ||||||||    
T  963 tgttggaattaaataacattcatgtcgcgtttaattatcttaattagactataaaagtgatgagatcattgaga 1036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 89; Significance: 7e-43; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 34497156 - 34497414
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttga-ggcttagggat 99  Q
    ||||||||||||||||||  || |||||||||||||||||||| | |||||||||||||  |   |  | |  ||||||||||||| | || |||| |||    
T  34497156 tagagtatcgtatccatagagactgtcgtttcgtccaaacaatccacgttacttattttaaattgacgatataaaataaaagagttaaagggttagagat 34497255  T
Q  100 tgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttg 199  Q
    |||||||||||||| ||| ||||| |||| |||||||| |||| ||| ||||||||||| |||||||| ||||| ||||||| | |||||| ||||||||    
T  34497256 tgcaatttttatctttttgcaacatagcatgttacctggtttgcttgcagaaaagtaagcagcggttaggattccttgaatc-cccctattcatttgttg 34497354  T
Q  200 ga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || |||||||||||||||  ||||||||| |||||||||||| |||||| || |||||||    
T  34497355 gatattaaataacattcatgtcacatttatttatcttaagtaaactataaaattgatgag 34497414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 74 - 248
Target Start/End: Complemental strand, 25182413 - 25182234
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgatt 172  Q
    ||||||||||| | ||| |||| ||||||||||||||||| ||| ||||| ||||||||||||| ||||||||| ||||||| ||  || ||||| || |    
T  25182413 aaataaaagagataagggttagagattgcaatttttatctatttgcaacagagcaagttacctgtttttggttgcagaaaaggaaacagtggttaggact 25182314  T
Q  173 ctttgaatctctcctattta-tttgttgg-aattaaataacattca--tcacatttagttatcttaagtagactatacaa 248  Q
    ||||||||| | | |||||| |||||||| ||||||||||||||||  |||| |||||||||||||||||||||||||||    
T  25182313 ctttgaatcccccatatttactttgttggaaattaaataacattcatgtcacgtttagttatcttaagtagactatacaa 25182234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 14528190 - 14528438
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| |  ||||||||||||||||||||||  | |||||||||||||  |   |  | |  |||||||| |||| ||| |||| ||||    
T  14528190 tagagtatcgtatccacatagattgtcgtttcgtccaaacaactcacgttacttattttaaactgacgatataaaataaaatagttaagggttagagatt 14528289  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttg 199  Q
    |||||||||| |||||| ||||||||||||||||||| |||||||| ||||||||||| |||||         ||||||||   |||||||| |||||||    
T  14528290 gcaatttttagctgtttgcaacaaagcaagttacctggtttggttgcagaaaagtaagcagcgg---------tttgaatcctccctatttattttgttg 14528380  T
Q  200 gaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || |||||||| |||||  || | |||||||||||||| ||||||||||||||||||||    
T  14528381 gatttaaataa-attcatgtcgcgtttagttatcttaaatagactatacaagtgatgag 14528438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 30122213 - 30121955
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt--ttgaacaattaaaacaaataaaagagttgaggcttagg-- 96  Q
    ||||||||| |||||| | |||||||| ||| ||||||||||| ||| ||||||||||   | |||||  || | |||| ||||||||||||  || |      
T  30122213 tagagtatcatatccacatggattgtcattttgtccaaacaattcgcattacttatttggcttaacaa--aatataaat-aaagagttgagggataagaa 30122117  T
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttg 196  Q
     ||||||||||||||||||||  |||| || ||||||||| ||||||||| ||||||||||| || |||||| | |||||||||  | ||||||||||||    
T  30122116 aattgcaatttttatctgtttgtaacagagtaagttacctattttggttgcagaaaagtaagcagtggttataactctttgaattccccctatttatttg 30122017  T
Q  197 ttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||||||| || |  ||   |||||||||||||||||||||||  ||||||||||    
T  30122016 ttggaattaaataacttttatgtcgtgtttagttatcttaagtagactatctaagtgatgag 30121955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 20 - 212
Target Start/End: Original strand, 9641937 - 9642129
Alignment:
Q  20 ggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagg-gat-tgcaatttttatctgttt 117  Q
    |||||||||||| ||||||||||  ||  ||||||||||||||||||| |||  ||||||| ||||||||| ||| | ||| ||||||||||||||| ||    
T  9641937 ggattgtcgttttgtccaaacaactcggattacttatttttgaacaataaaattaaataaa-gagttgagggttaagagatgtgcaatttttatctgctt 9642035  T
Q  118 tcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttggaattaaataaca 212  Q
     ||||| ||||| |||| |||||| |||| ||||| || || ||||||||  |||||||||||| | |||||| |||||||||||||||||||||    
T  9642036 gcaacagagcaaattacttgttttagttgcagaaatgttagcagcggttaaaattctttgaatc-cccctattcatttgttggaattaaataaca 9642129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 13697896 - 13698111
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||||||| ||||||| |||||||||||||||||   ||||||||||||||      |  | |  ||||| ||||| | ||| |||| ||||    
T  13697896 tagagtatcgtatccacaaggattttcgtttcgtccaaacaacctgcgttacttattttaagttgacgatataaaatacaagagataagggttagagatt 13697995  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttg 199  Q
    ||||||||||||| ||| ||||| ||||||||||||| |||||||| ||||||||||| || | |||||| |||||||||| | |||||||| |||||||    
T  13697996 gcaatttttatctctttgcaacagagcaagttacctg-tttggttgcagaaaagtaagcagtgattatgactctttgaatc-cccctatttattttgttg 13698093  T
Q  200 ga-attaaataacattca 216  Q
    || |||||||||||||||    
T  13698094 gatattaaataacattca 13698111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 253
Target Start/End: Original strand, 7983718 - 7983875
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-ttt 195  Q
    ||||||||||||||||||||| | ||| |||||||| |||| |||||||| ||||||||||| | ||| || ||||||||||||| | |||||||| |||    
T  7983718 gattgcaatttttatctgtttgcgacatagcaagttgcctggtttggttgcagaaaagtaagcaacgggtaggattctttgaatc-cccctatttatttt 7983816  T
Q  196 gttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgat 253  Q
    |||||| ||||| ||||||||  |    ||||||||||||| ||||||||||||| ||||    
T  7983817 gttggatttaaa-aacattcatgttgtgtttagttatcttatgtagactatacaaatgat 7983875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 18448502 - 18448340
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||| ||||||||||||| ||||| ||||||||||||| ||||||||| | ||||||||| | |||||||||||||||| ||| ||||||| ||| |||    
T  18448502 ttgcagtttttatctgtttgcaacagagcaagttacctgtttttggttgcataaaagtaagcaacggttatgattctttgtatccctcctatatatattg 18448403  T
Q  197 ttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||| ||||| ||||| | ||    | |||| |||||||| | |||||||||||||||||||    
T  18448402 ttggatattaagtaacagttatgctgcgtttatttatcttaggcagactatacaagtgatgag 18448340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 256
Target Start/End: Original strand, 24644878 - 24645138
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt--ttgaacaattaaaacaaataaaagagttgaggcttaggga 98  Q
    |||||||| ||||||| | ||||| ||||||  |||||| ||| ||| ||||||||||  || |||||  ||   |||||||||||| || |  ||| ||    
T  24644878 tagagtattgtatccacatggattatcgttttttccaaataattcgcattacttatttggtttaacaa--aattaaaataaaagagtcgaaggatagaga 24644975  T
Q  99 ttgcaattttt--atctgttttcaacaaagcaa-gttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatt 194  Q
    |||||||||||  |||| ||| ||||| | ||| |||||||||||| ||||| ||||||||||| ||   | | || |||||||||| | |||||| |||    
T  24644976 ttgcaatttttttatctatttgcaacataacaaagttacctgtttttggttgcagaaaagtaagcagttttaaggaatctttgaatccc-cctattcatt 24645074  T
Q  195 tgttggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||||||||| |||||  | | ||||||||||||||||| |||||||||||||||||    
T  24645075 tgttggaattaaataactttcatgtcgcgtttagttatcttaagtatactatacaagtgatgag 24645138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 114 - 256
Target Start/End: Complemental strand, 26394644 - 26394498
Alignment:
Q  114 gttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgttgga-attaaataa 210  Q
    |||| |||||||||||||| |||||||||||||| ||||||||||| | |||||| ||||||| ||||| | ||||||||| ||||| || |||||||||    
T  26394644 gtttgcaacaaagcaagtttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaatc-cccctatttatattgttagatattaaataa 26394546  T
Q  211 cattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || | |  || | |||| |||||||| |||||||||||||||||||||    
T  26394545 cagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgag 26394498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 24114244 - 24114082
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaag-ttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||||||||| || || |||||| ||||||||||||||    |||||||||| |||||||| ||||||| ||||| | ||||||||| |||    
T  24114244 ttgcaatttttatctgtttgcagcagagcaagtttacctgttttggtatctgaaaagtaagcagcggttaggattcttcgaatcccccctatttatattg 24114145  T
Q  197 ttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||| | ||| ||||| | ||  | | |||| |||||||| |||||||||||||||||||||    
T  24114144 ttggataataagtaacagtaatgacgcgtttatttatcttaggtagactatacaagtgatgag 24114082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 23893174 - 23893091
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||||  ||  |||| |||||||||||||    
T  23893174 ttgcaatttttatctgtttgcaacaaagcaaatttacctgttttggttgcagaaaagtaactagtagttaggattctttgaatc 23893091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 256
Target Start/End: Original strand, 24269735 - 24269897
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||| ||||||||||| ||||| || |  ||||||||||| ||||| ||||||||||| |||||||| ||||||| ||||| | ||| ||||| |||    
T  24269735 ttgcaatctttatctgtttgcaacagagtagtttacctgtttttggttgcagaaaagtaagcagcggttaggattcttcgaatcccccctgtttatattg 24269834  T
Q  197 ttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||| ||||||||  | | |  || | |||| |||||||| |||||||||||||||||||||    
T  24269835 ttggatattaaatataagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgag 24269897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 175
Target Start/End: Complemental strand, 44011082 - 44010907
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt--ttgaacaattaaaacaaataaaagagttgaggcttaggga 98  Q
    |||||||||||||||| | |||||||||||||||| |||  || | |||||| |||||  || |||||  || | |||||||||| ||||    ||| ||    
T  44011082 tagagtatcgtatccacatggattgtcgtttcgtcaaaatgattcacgttacatatttggtttaacaa--aataaaaataaaagatttgaatgatagaga 44010985  T
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctt 175  Q
    ||||||||||||| ||||| ||||| | |||||||| || ||||||||| |||| |||||| |||||||| |||||||    
T  44010984 ttgcaatttttatatgtttgcaacagaacaagttacatgtttttggttgcagaagagtaagtagcggttaagattctt 44010907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 99 - 253
Target Start/End: Complemental strand, 13314953 - 13314795
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-tt 195  Q
    ||||||||||||| ||||| ||||  | ||| || ||||||||| ||||| ||||||||||| | |||||| ||||||| ||||| |  |||||||| ||    
T  13314953 ttgcaatttttatatgtttgcaactgaacaaatttacctgtttttggttgcagaaaagtaagcaacggttaagattcttcgaatccc--ctatttatatt 13314856  T
Q  196 gttgga-attaaataacattcat--cacatttagttatcttaagtagactatacaagtgat 253  Q
    |||||| ||||||||||||||||  | | |||| |||||||| ||||||||||||||||||    
T  13314855 gttggatattaaataacattcatgtcgcgtttatttatcttaggtagactatacaagtgat 13314795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 92 - 256
Target Start/End: Original strand, 19786863 - 19787032
Alignment:
Q  92 ttagggattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatt 190  Q
    |||| ||||| ||||||||||||||| ||||| |||||||||| || ||||| ||||||||||| ||  |  ||||| || |||||||||  | | ||||    
T  19786863 ttagagattgtaatttttatctgtttgcaacagagcaagttacatgtttttgattgtagaaaaggaaacaatggttaggactctttgaattccccttatt 19786962  T
Q  191 ta-tttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || ||||||||| |||||| | ||||||  || | |||||||||||||||| ||||||||| ||||||||    
T  19786963 tactttgttggatattaaaaagcattcatgtcgcgtttagttatcttaagtcgactatacaggtgatgag 19787032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 18569193 - 18569278
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctc 183  Q
    |||| |||||||||||||| ||||| ||| |||| || ||||||||||| ||||||||||| |||||||| |||| ||||||||||    
T  18569193 ttgctatttttatctgtttgcaacatagcgagtttacttgttttggttgcagaaaagtaagcagcggttacgattttttgaatctc 18569278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17101951 - 17101891
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||||| ||||||||||||| ||||||||||| | ||||||||| ||||    
T  17101951 tagagtatcgtatccatagggattgtcgtttcatccaaacaatatgtgttacttatatttg 17101891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 27659486 - 27659546
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||| | |||||||||||||||||||||||| | || ||||||||||||||    
T  27659486 tagagtatcgtatctacaaggattgtcgtttcgtccaaacattccgagttacttatttttg 27659546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 29382419 - 29382359
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | ||||||||||||| ||||||||||  ||||||||||||||||    
T  29382419 tagagtatcgtatccacagggattgtcgtttcatccaaacaatttgcgttacttatttttg 29382359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 106 - 256
Target Start/End: Complemental strand, 24110623 - 24110468
Alignment:
Q  106 ttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgttgga-a 202  Q
    |||||||||||| ||||| || ||||| | |||||||||||| ||||||||||| || ||||| |||| || ||||| | ||| ||||| |||||||| |    
T  24110623 ttttatctgtttgcaacagaggaagtttatctgttttggttgcagaaaagtaagcaggggttaggattattcgaatcccccctgtttatattgttggata 24110524  T
Q  203 ttaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
     ||| ||||| | |  || | |||| |||||||| |||||||||||||||||||||    
T  24110523 ataagtaacagtaatgtcgcgtttatttatcttaggtagactatacaagtgatgag 24110468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 24114340 - 24114280
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||  | |||||||||||||||||||||||   ||||||||||||||||    
T  24114340 tagagtatcgtatccgcagggattgtcgtttcgtccaaacaacttgcgttacttatttttg 24114280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 24269638 - 24269698
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||||||||||||||||||| | | ||| |||||||||    
T  24269638 tagagtatcgtatccacagggattgtcgtttcgtccaaacaattcacattatttatttttg 24269698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 13315047 - 13314992
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    ||||||||||||| | ||||| | |||||||||||||||| |||||||||||||||    
T  13315047 agtatcgtatccacatggatttttgtttcgtccaaacaattcgcgttacttatttt 13314992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 13 - 181
Target Start/End: Complemental strand, 30806538 - 30806379
Alignment:
Q  13 tccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggattgcaatttttatc 112  Q
    |||| ||||||||||||||| ||||||||||  |||||||||||||| |    |  | |  ||||||||||||| ||| |||| ||||||||||||||||    
T  30806538 tccacaaggattgtcgtttcatccaaacaatttgcgttacttattttagtttgacgatataaaataaaagagttaagggttagagattgcaatttttatc 30806439  T
Q  113 tgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||         || ||||| |||| |||||||| ||||||||||| ||| ||||||| ||||||||||    
T  30806438 tgt--------gagaaagttgcctg-tttggttgcagaaaagtaagcagcagttatgactctttgaatc 30806379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 2637639 - 2637697
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||||||||||| | |||||||||||||||| ||||||  | |||||||||||||    
T  2637639 tagagtatcgtatccacatggattgtcgtttcgtctaaacaactcccgttacttatttt 2637697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 29382322 - 29382244
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagt-tacct-gttttggttgtagaaaagtaagaagcggttatgattctt 175  Q
    ||||||||||||||||||| ||||| ||||||| |||||  ||||||||| ||||||||||| || ||||| |||||||    
T  29382322 ttgcaatttttatctgtttgcaacatagcaagtgtacctatttttggttgcagaaaagtaagcagtggttaggattctt 29382244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 15238998 - 15239047
Alignment:
Q  161 gcggttatgattctttgaatctctcctatttatttgttggaattaaataa 210  Q
    ||||||| ||||||||||||| |  |||||||||||||||||||||||||    
T  15238998 gcggttaggattctttgaatcccctctatttatttgttggaattaaataa 15239047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 15238840 - 15238896
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatt 57  Q
    |||| ||||||||||| | | |||||||||||||| ||||||| |||||||||||||    
T  15238840 tagattatcgtatccacatgaattgtcgtttcgtctaaacaattcgcgttacttatt 15238896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 16403953 - 16404013
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| |||||||| |||||| |  ||||||||||||||    
T  16403953 tagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttg 16404013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 16404039 - 16404122
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||| ||||| ||||| ||| || |||||| |||||| || |||||| |||| |||||||| ||||||| |||||    
T  16404039 ttgcaatttttatttgtttgcaacagagcgaatttacctattttggctgcagaaaaataagcagcggttaggattcttcgaatc 16404122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 18448600 - 18448541
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    ||||| |||||||| |||  ||||||||||| ||||||||||| | ||||||||||||||    
T  18448600 tagagcatcgtatcaatagagattgtcgttttgtccaaacaattctcgttacttattttt 18448541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 21314668 - 21314723
Alignment:
Q  5 gtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||| | | ||||| ||||||||| |||||||||| ||||||||||||||    
T  21314668 gtatcgtatctacagggattttcgtttcgtgcaaacaatactcgttacttattttt 21314723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5850982 - 5851039
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    |||||||||||||||| |  ||||||||||||  ||||||||| || |||||||||||    
T  5850982 tagagtatcgtatccacatagattgtcgtttcaaccaaacaatccgtgttacttattt 5851039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 14075635 - 14075692
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    |||| ||||||||||| | |||||||||||||  |||||||||  |||||||||||||    
T  14075635 tagactatcgtatccacatggattgtcgtttcaaccaaacaatgtgcgttacttattt 14075692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 6885000 - 6885056
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||||||| | | |||||||||||||||||||||||   ||| ||||||||||    
T  6885000 gagtatcgtatctacatggattgtcgtttcgtccaaacaacttgcgctacttatttt 6885056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 89912 - 89655
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||||||| |||| | ||| |||||||||||||| ||||||  |||||||||||||||  |||| | ||   ||  ||||||||| ||| |||| ||||    
T  89912 tagagtatcatatctacaagtattgtcgtttcgtctaaacaactcgcgttacttattttaaaacagtaaagtgaataaaaagagttaagggttagagatt 89813  T
Q  101 gc-aatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttg 199  Q
       ||||| ||||||||| ||||  | |||||||||||||||||||| |||||| |||| |||||||| || ||||| |||| | || ||||||||||||    
T  89812 tttaatttctatctgtttgcaaccgaacaagttacctgttttggttgcagaaaaataagcagcggttaggactctttaaatcac-cccatttatttgttg 89714  T
Q  200 gaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |||||||||||||||||  || |||||||||||||||||||||||||  ||||||||||    
T  89713 gaattaaataacattcatgtcgcatttagttatcttaagtagactatctaagtgatgag 89655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 7e-40; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 21825927 - 21825670
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt--ttgaacaattaaaacaaataaaagagttga-ggcttaggg 97  Q
    |||||||||||||||| | ||||| | |||||||||||||| | ||||||||||||||  || |||||  || | ||||||| ||||||| || | || |    
T  21825927 tagagtatcgtatccacatggatttttgtttcgtccaaacagttcgcgttacttatttggtttaacaa--aatataaataaa-gagttgatggataagag 21825831  T
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgt 197  Q
    ||||||||||||||||||||  |||| |||||||||||| ||||||||| ||||||||||| |   |||| || |||||||||| | ||||| | |||||    
T  21825830 attgcaatttttatctgtttgtaacatagcaagttaccttttttggttgcagaaaagtaagtaagagttaggactctttgaatcccccctatgtttttgt 21825731  T
Q  198 tggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||||||||||||    |||||||||||| ||||||||||||  ||||||||||    
T  21825730 tggaattaaataacattcatgctgcatttagttatcgtaagtagactatctaagtgatgag 21825670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 97 - 301
Target Start/End: Complemental strand, 31285977 - 31285772
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttg 196  Q
    ||||||||||||||| ||||||||| | |||||||||||| |||||||| |  ||||||||| ||| |||| |||| || ||||| |  |||||| ||||    
T  31285977 gattgcaatttttatatgttttcaatagagcaagttacctattttggttttcaaaaagtaagcagcagttaagattattcgaatccccactatttctttg 31285878  T
Q  197 ttggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgagaacattgagatttatctaacctagtcggtttgttgagt 294  Q
    ||||||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||  ||||| ||  | |||||||||||||||| ||  |||    
T  31285877 ttggaattaaataacattcatgtcacgtttatttatcttaagtagactatacaagtgatgaggccattgggacgt-tctaacctagtcggttcgtcaagt 31285779  T
Q  295 tgcacct 301  Q
    |||||||    
T  31285778 tgcacct 31285772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 4 - 256
Target Start/End: Original strand, 21325384 - 21325638
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttga-ggcttagggattgc 102  Q
    ||||||||||||| ||  ||||||||||||||||||||||  | ||||||||||||     ||  | |  ||||||||||||||| || |||| ||||||    
T  21325384 agtatcgtatccacaaaaattgtcgtttcgtccaaacaatttgtgttacttattttaagttaacgatataaaataaaagagttgaagggttagagattgc 21325483  T
Q  103 aatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgga- 201  Q
    ||||||||||| ||| ||||| ||||||||||||  |||||||| ||||||||||| |||||||||||||||| | |  || |||||||||||||||||     
T  21325484 aatttttatctatttgcaacagagcaagttacctaatttggttgcagaaaagtaagtagcggttatgattcttcgca--tcccctatttatttgttggat 21325581  T
Q  202 attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||| |||  || | |||| ||||||||||| ||||||||||| ||||||    
T  21325582 attaaataacagtcatgtcgcttttatttatcttaagttgactatacaagcgatgag 21325638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 21303412 - 21303154
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||||||| ||| || |||||| ||||| ||||||||||   |||||||||||||      | || |  ||||||||||||  ||| |||| ||||    
T  21303412 tagagtatcgtagccacaaagattgttgtttcatccaaacaatttccgttacttattttaagttgactatataaaataaaagagtaaagggttagagatt 21303313  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 200  Q
    ||||||||||||||||| ||||| |||||||||| ||||||||||| ||||||||||| |||||||| |||| |||||||| | ||||||||||||||||    
T  21303312 gcaatttttatctgtttgcaacagagcaagttacttgttttggttgcagaaaagtaagcagcggttaggattatttgaatcccccctatttatttgttgg 21303213  T
Q  201 a-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    | |||||||| || | |  ||   |||| ||| ||||||||||||||| ||||||||||    
T  21303212 atattaaatagcagtaatgtcgtgtttatttaccttaagtagactatataagtgatgag 21303154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 23 - 299
Target Start/End: Complemental strand, 18736708 - 18736432
Alignment:
Q  23 ttgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggattgc-aatttttatctgttttcaa 121  Q
    ||||||||||||| ||||||  |||||||||||||||  |||| | |||   |||||||||||| ||| |||| ||||   ||||||||| ||||| |||    
T  18736708 ttgtcgtttcgtctaaacaactcgcgttacttattttaaaacagt-aaagtgaataaaagagttaagggttagagatttttaatttttatttgtttgcaa 18736610  T
Q  122 caaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttggaattaaataacattca--tca 219  Q
    |  | |||||||||||||||||||| |||||| |||| |||||||| |||||||| ||| |  || ||||||||||||||||||||||| |||||  ||     
T  18736609 ccgaacaagttacctgttttggttgcagaaaaataagcagcggttaggattctttaaat-taccccatttatttgttggaattaaataatattcatgtcg 18736511  T
Q  220 catttagttatcttaagtagactatacaagtgatgagaacattgagatttatctaacctagtcggtttgttgagttgcac 299  Q
    |||||||||||||||||||||||||  | ||||||||  | ||| ||  | ||||||||| |||||| ||||||||||||    
T  18736510 catttagttatcttaagtagactatctacgtgatgaggtcgttgggacgt-tctaacctaatcggttcgttgagttgcac 18736432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 1 - 240
Target Start/End: Original strand, 8445863 - 8446102
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    |||||||| || |||| | |||||||||||||||||||| ||| |||||||| | |||||||||||  |||  |||||||||||||  || |||| ||||    
T  8445863 tagagtattgtgtccacatggattgtcgtttcgtccaaa-aattcgcgttacatgtttttgaacaaaaaaataaaataaaagagtttggggttagagatt 8445961  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttgg 200  Q
    |||||||||||| |||| ||||| | ||||||||||   ||||||| ||||| ||||| || ||||| ||||||||||||| | |||||| |||| || |    
T  8445962 gcaatttttatcagtttgcaacagaacaagttacctccattggttgcagaaatgtaagcagtggttaggattctttgaatc-cccctattcatttctttg 8446060  T
Q  201 aattaaataacattca--tcacatttagttatcttaagtaga 240  Q
    | ||||||||||||||  |||  ||||||||| |||||||||    
T  8446061 agttaaataacattcatgtcatgtttagttatgttaagtaga 8446102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 98 - 256
Target Start/End: Original strand, 17155930 - 17156089
Alignment:
Q  98 attgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgt 197  Q
    |||||||||||||||||||| ||||| |||||||||||| ||| ||||| ||||||||||| |||| ||| || | |||||||| |   ||||  |||||    
T  17155930 attgcaatttttatctgtttgcaacagagcaagttacctattt-ggttgcagaaaagtaagtagcgattaggactatttgaatcccctatattattttgt 17156028  T
Q  198 tggaattaaataacattcat--cacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||||||||||||  ||| |||||| ||||||||||||||||||||||||||||    
T  17156029 tggaattaaataacattcatgtcacgtttagtaatcttaagtagactatacaagtgatgag 17156089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 74 - 252
Target Start/End: Original strand, 41508480 - 41508662
Alignment:
Q  74 aaataaaagagttgaggcttagggatt-gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgatt 172  Q
    ||||||||||||| ||| |||| |||| ||||||| ||||||||| |||||||||||||||| ||||||||||| ||||||||||  |||||||| ||||    
T  41508480 aaataaaagagttaagggttagagatttgcaatttgtatctgtttgcaacaaagcaagttacatgttttggttgcagaaaagtaaccagcggttaagatt 41508579  T
Q  173 ctttgaatctctcctatttat-ttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtga 252  Q
    ||||||||| | ||| ||||| |||||||| ||||||||||| | |  ||||||||| |||||||| ||||| |||||||||||    
T  41508580 ctttgaatc-cccctctttatattgttggatattaaataacagtaatgtcacatttatttatcttaggtagattatacaagtga 41508662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 12805948 - 12805693
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||||||| |||||| | ||||||||||||| ||||||||||  ||||||||||||||    | |    |  |||||||||| |  ||| |||| ||||    
T  12805948 tagagtatcatatccacatggattgtcgtttcatccaaacaatttgcgttacttattttaagtcgacgttataaaataaaagattaaagggttagagatt 12805849  T
Q  101 gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttg 199  Q
    ||||||||||||||||| ||||| || || ||||||| |||||||| ||||||||||| || ||||| ||||||| |||||   ||||| || |||||||    
T  12805848 gcaatttttatctgtttgcaacagagaaaattacctgatttggttgcagaaaagtaagcaggggttaggattcttcgaatc---cctatctattttgttg 12805752  T
Q  200 gaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    | |||||||||||||||  || | |||| |||| |||||||||||||| ||||||||||    
T  12805751 gcattaaataacattcatgtcgcgtttatttatattaagtagactatataagtgatgag 12805693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 74 - 235
Target Start/End: Complemental strand, 2723820 - 2723658
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaa-tttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgatt 172  Q
    ||||||| ||||| ||| ||||  ||||||| ||||||||||||| ||||||||||||||||||| |||||||| | ||||||||| |||||||| || |    
T  2723820 aaataaatgagttaagggttagatattgcaaatttttatctgtttgcaacaaagcaagttacctg-tttggttgcaaaaaagtaagcagcggttaagact 2723722  T
Q  173 ctttgaatctctcctattta-tttgttggaattaaataacattca--tcacatttagttatcttaa 235  Q
     |||||||| || ||||||| ||||||||||||||||||||||||  || ||||||||||||||||    
T  2723721 atttgaatc-ct-ctatttattttgttggaattaaataacattcatgtcgcatttagttatcttaa 2723658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 99 - 212
Target Start/End: Complemental strand, 2167577 - 2167463
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgt 197  Q
    ||||||||||||||||||| ||||| | ||||||||||||||||||||| ||||||||||||| ||||| ||||||| ||||| | ||||||||| ||||    
T  2167577 ttgcaatttttatctgtttgcaacataccaagttacctgttttggttgtggaaaagtaagaagtggttaggattcttcgaatc-cccctatttatattgt 2167479  T
Q  198 tgga-attaaataaca 212  Q
    |||| |||||||||||    
T  2167478 tggatattaaataaca 2167463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 113 - 256
Target Start/End: Original strand, 8143767 - 8143911
Alignment:
Q  113 tgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgttggaattaaataaca 212  Q
    ||||| ||||| | |||||||||||||||||||| ||||| ||||| | |||||| ||||||| ||||| | |||||||||||||||||||||| ||||     
T  8143767 tgtttgcaacagaacaagttacctgttttggttgcagaaa-gtaagcaacggttaggattcttggaatcccccctatttatttgttggaattaagtaacg 8143865  T
Q  213 ttca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||  |  | |||| ||||||||||||||||||| ||||||||||    
T  8143866 ttcatgttgcgtttatttatcttaagtagactatataagtgatgag 8143911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 1 - 256
Target Start/End: Complemental strand, 16245787 - 16245529
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||||||| |||||| | ||||| || ||||||||||||||| | ||||||||||||| |    |  | ||  |||||||||||| ||| |||| ||||    
T  16245787 tagagtatcatatccacatggattatcatttcgtccaaacaattctcgttacttattttagtttgacaataa--aataaaagagttaagggttagagatt 16245690  T
Q  101 -gcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgt 197  Q
     ||||||||||||| ||| ||||| ||||||||||||| ||||||||| ||||||||||| ||||||||  |||||  ||||| | ||||||||| ||||    
T  16245689 tgcaatttttatctatttgcaacagagcaagttacctgtttttggttgcagaaaagtaagcagcggttagaattctccgaatc-cccctatttatattgt 16245591  T
Q  198 tgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || | ||||||||||| | |  || |||| | |||||||| || ||||||||||||||||||    
T  16245590 tgaatattaaataacagtaatttctcattcatttatcttaggtggactatacaagtgatgag 16245529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 256
Target Start/End: Original strand, 8267076 - 8267231
Alignment:
Q  105 tttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgttgga-a 202  Q
    ||||| ||||||  ||||| ||||| |||||| ||||||||| | |||||| || |||||||| || |||||||||| | |||||||| ||||||||| |    
T  8267076 tttttttctgttagcaacagagcaaattacctattttggttgcataaaagtcagtagcggttaggactctttgaatcccccctatttattttgttggata 8267175  T
Q  203 ttaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||||||  |||| |||| ||||||||| |||||||| ||| |||||||    
T  8267176 ttaaataacattcatgtcacgtttaattatcttaaatagactatgcaactgatgag 8267231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 10744943 - 10745099
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggatt 100  Q
    ||||||||||| |||||| |||||||||||||||| ||||||  | | ||| |||||||  |||||  ||    |||||||||||||||| | || ||||    
T  10744943 tagagtatcgtttccatagggattgtcgtttcgtctaaacaaatcacattaattattttaaaacaa--aattataataaaagagttgagggtaagagatt 10745040  T
Q  101 -gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaag 158  Q
     ||||||||||||| ||| ||||| |||||||||||||||||||||| ||||| |||||    
T  10745041 tgcaatttttatctatttgcaacagagcaagttacctgttttggttgcagaaatgtaag 10745099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 99 - 256
Target Start/End: Complemental strand, 17438391 - 17438229
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||||||||| ||||| ||||| || |||||||||||||| ||||||||||| | |||||| ||||||| ||||| |  |||||||| |||    
T  17438391 ttgcaatttttatctgtttgcaacagagcaattttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaatcccctctatttatattg 17438292  T
Q  197 ttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    || || ||||||||||  |||  || | |||| |||||||| ||||||||| |||||||||||    
T  17438291 ttcgatattaaataacggtcatgtcgcgtttatttatcttaggtagactatgcaagtgatgag 17438229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 4650364 - 4650447
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||  |||||||| |||||||||||||| ||||||||||| | |||||| ||||||| |||||    
T  4650364 ttgcaatttttatctgtttgcaacggagcaagtttacctgttttggttgcagaaaagtaagcaacggttaggattcttcgaatc 4650447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 8319204 - 8319346
Alignment:
Q  119 caacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcc-tatttattt-gttgga-attaaataacattc 215  Q
    ||||| ||||| |||||| ||||||||| | ||||||||| || ||||| || |||||||||| | || ||||||||| |||||| ||||||||||||||    
T  8319204 caacatagcaaattacctattttggttgcataaaagtaagcagtggttaggactctttgaatccccccctatttattttgttggatattaaataacattc 8319303  T
Q  216 a--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    |  |||| |||| ||||||||| |||||||| ||| |||||||    
T  8319304 atgtcacgtttaattatcttaaatagactatgcaactgatgag 8319346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 8765244 - 8765327
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||||||||||| ||| |||| ||||||| |||||    
T  8765244 ttgcaatttttatatgtttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagcagttaagattcttcgaatc 8765327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 8770146 - 8770229
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||| ||||| ||||| |||||||| |||||||||||||| ||||||||||| ||| |||| ||||||| |||||    
T  8770146 ttgcaatttttatatgtttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcagcagttaggattcttcgaatc 8770229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 100 - 181
Target Start/End: Complemental strand, 20023512 - 20023430
Alignment:
Q  100 tgcaatttttatctgttttcaacaaagc-aagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||||||||||||||| ||||| ||| || ||||| |||||||||| ||||||||||| ||| |||| |||||||||||||    
T  20023512 tgcaatttttatctgtttgcaacagagcgaatttaccagttttggttgcagaaaagtaagtagcagttaggattctttgaatc 20023430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17438489 - 17438429
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||| |||||| | |||||||||||||||||||||||| | |||||||||||||||    
T  17438489 tagagtatcatatccacatggattgtcgtttcgtccaaacaattcacgttacttatttttg 17438429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 21301959 - 21302019
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| ||||||||||||||| || ||||||||||||||    
T  21301959 tagagtatcgtatccacatggattgtcatttcgtccaaacaattcgagttacttatttttg 21302019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 19925681 - 19925622
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| | |||||||| ||||||||||| ||| ||||||||||||||||    
T  19925681 tagagtatcgtatccacatggattgtcttttcgtccaaataattcgcgttacttattttt 19925622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 20429751 - 20429810
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||| |||||||||||| |||| |||| ||||| ||||||||||||||||    
T  20429751 tagagtatcgtatctataaggattgtcatttcatccacacaattcgcgttacttattttt 20429810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 138 - 256
Target Start/End: Complemental strand, 19171787 - 19171662
Alignment:
Q  138 ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatt----tgttgga-attaaataacattcat--cacatttagttat 230  Q
    |||| |||| ||||||||| | || ||||| ||||||| ||||| | ||||||||||    ||||||| ||||||||||| ||||  ||| |||| ||||    
T  19171787 tttttgttgcagaaaagtatgcagtggttaggattcttcgaatcacccctatttattatattgttggatattaaataacaatcatttcacgtttatttat 19171688  T
Q  231 cttaagtagactatacaagtgatgag 256  Q
    |||| |||||||||||||||||||||    
T  19171687 cttaggtagactatacaagtgatgag 19171662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 3116475 - 3116419
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||| ||||||| | |||||||||||||||||||||||| | |||||||||||||    
T  3116475 gagtatagtatccacagggattgtcgtttcgtccaaacaattcacgttacttatttt 3116419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 16229915 - 16229831
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| ||| || ||||||| ||||||||| | ||||||||| |||||||| ||||||| |||||    
T  16229915 ttgcaatttttatctgtttgcaacagagcgaatttacctgtttttggttgcaaaaaagtaagcagcggttaggattcttcgaatc 16229831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 180
Target Start/End: Original strand, 932884 - 932963
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaat 180  Q
    |||||||||| ||||| ||||| |||||||| || ||||||||||| ||||||||||| ||||||||  |||||| ||||    
T  932884 caatttttatttgtttgcaacagagcaagtttacttgttttggttgcagaaaagtaagcagcggttagtattcttcgaat 932963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 157
Target Start/End: Complemental strand, 3116380 - 3116321
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacct-gttttggttgtagaaaagtaa 157  Q
    ||||||||||||||||||| ||||| |||||| ||||| |||||||||| ||||||||||    
T  3116380 ttgcaatttttatctgtttgcaacagagcaagatacctggttttggttgcagaaaagtaa 3116321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 60
Target Start/End: Original strand, 12411192 - 12411251
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||| ||||||||||||||||| ||||||||    |||||||||||||    
T  12411192 tagagtatcgtatccacaaggattgtcgtttcgtacaaacaatttaggttacttattttt 12411251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 102 - 175
Target Start/End: Complemental strand, 27413855 - 27413780
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctt 175  Q
    |||||||||||||||||||||| ||| | || ||||||||| ||||| ||||||||||| |||||||| |||||||    
T  27413855 caatttttatctgttttcaacagagcgattttacctgtttttggttgcagaaaagtaagcagcggttaggattctt 27413780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 162 - 212
Target Start/End: Complemental strand, 821411 - 821361
Alignment:
Q  162 cggttatgattctttgaatctctcctatttatttgttggaattaaataaca 212  Q
    |||||| |||||| ||||||||  |||||||||||||||||||||||||||    
T  821411 cggttaggattctctgaatctcctctatttatttgttggaattaaataaca 821361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 4 - 57
Target Start/End: Original strand, 4650275 - 4650328
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatt 57  Q
    ||||||||||||| | |||||||| ||||| ||||||||| |||||||||||||    
T  4650275 agtatcgtatccacagggattgtcctttcgcccaaacaattcgcgttacttatt 4650328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 7495035 - 7494915
Alignment:
Q  138 ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgttggaattaaataacattcat--cacatttagttatctta 234  Q
    ||||||||||||||||||||| || | ||| |||| || ||||| |  |||||||| ||||||||   |||||||| ||||  | | |||| ||||||||    
T  7495035 ttttggttgtagaaaagtaagcagggattaggattattcgaatcccctctatttatattgttggataaaaataacagtcatgtcgcgtttatttatctta 7494936  T
Q  235 agtagactatacaagtgatga 255  Q
     ||||||||||||||||||||    
T  7494935 ggtagactatacaagtgatga 7494915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 102 - 181
Target Start/End: Complemental strand, 12754881 - 12754800
Alignment:
Q  102 caatttttatctgttttcaacaaagcaagtt-acctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||||||| ||||| ||||| ||| |||| ||||| ||||||||| ||||||||||| |||||||| ||||||| |||||    
T  12754881 caatttttatttgtttgcaacagagctagtttacctggttttggttgcagaaaagtaagcagcggttaggattcttcgaatc 12754800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 222 - 255
Target Start/End: Original strand, 38083822 - 38083855
Alignment:
Q  222 tttagttatcttaagtagactatacaagtgatga 255  Q
    ||||||||||||||||||||||||||||||||||    
T  38083822 tttagttatcttaagtagactatacaagtgatga 38083855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 181
Target Start/End: Original strand, 8170013 - 8170093
Alignment:
Q  103 aatttttatctgttttcaacaaagc-aagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||| ||||| ||| || ||||||| ||||||||| ||||||||| | |||||||| ||||||| |||||    
T  8170013 aatttttatctgtttgcaacatagcgaatttacctgtttttggttgcagaaaagtatgcagcggttaggattcttcgaatc 8170093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 22349450 - 22349510
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| |   |||||||||||||||||||||| | | |||||||||||||    
T  22349450 tagagtatcgtatccacataaattgtcgtttcgtccaaacaattcacattacttatttttg 22349510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 19171875 - 19171832
Alignment:
Q  18 aaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    ||||||||||||||||||||||||||  || |||||||||||||    
T  19171875 aaggattgtcgtttcgtccaaacaatttgcattacttatttttg 19171832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 106 - 175
Target Start/End: Complemental strand, 19925576 - 19925505
Alignment:
Q  106 ttttatctgttttcaacaaagcaagtt-acctgttttggtt-gtagaaaagtaagaagcggttatgattctt 175  Q
    |||||| ||||| ||||| |||||||| ||||||||||||| | ||||||||||| |||||||| |||||||    
T  19925576 ttttatatgtttgcaacagagcaagtttacctgttttggtttgcagaaaagtaagcagcggttaggattctt 19925505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 1 - 68
Target Start/End: Original strand, 28728985 - 28729052
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaatt 68  Q
    |||||||||||||||| |  ||||||||||||  ||||||||| |||||||||| |||  ||||||||    
T  28728985 tagagtatcgtatccacatagattgtcgtttcaaccaaacaattcgcgttacttgtttgggaacaatt 28729052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 6 - 60
Target Start/End: Complemental strand, 7478388 - 7478334
Alignment:
Q  6 tatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    ||||||||||| |  ||||||||||| ||||||||||| | ||||||||||||||    
T  7478388 tatcgtatccacattgattgtcgtttggtccaaacaattcacgttacttattttt 7478334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 202
Target Start/End: Complemental strand, 8557025 - 8556987
Alignment:
Q  164 gttatgattctttgaatctctcctatttatttgttggaa 202  Q
    ||||||||||||||||||||  |||||||||||||||||    
T  8557025 gttatgattctttgaatctcctctatttatttgttggaa 8556987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 97 - 181
Target Start/End: Original strand, 19908443 - 19908529
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||| ||||||||| | ||| |||||||||||||| |||| |||| ||||| ||||||||||| ||| |||| ||||||| |||||    
T  19908443 gattggaatttttatttttttgcaacaaagcaagtttacctatttttggttgcagaaaagtaagcagcagttaggattcttcgaatc 19908529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 222 - 256
Target Start/End: Original strand, 20429966 - 20430000
Alignment:
Q  222 tttagttatcttaagtagactatacaagtgatgag 256  Q
    |||| ||||||||||||||||||||||||||||||    
T  20429966 tttatttatcttaagtagactatacaagtgatgag 20430000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 3 - 60
Target Start/End: Complemental strand, 7495151 - 7495094
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||| ||||| | |||| |||||||||||||||||||   ||||||||||||||    
T  7495151 gagtatcgaatccacatggatcgtcgtttcgtccaaacaattaacgttacttattttt 7495094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 8557187 - 8557130
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    |||||||||||||||| | ||||||||||||| |  |||||||  |||||||||||||    
T  8557187 tagagtatcgtatccacatggattgtcgtttcatttaaacaatttgcgttacttattt 8557130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 174
Target Start/End: Complemental strand, 19576182 - 19576105
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaag-caagttacct-gttttggttgtagaaaagtaagaagcggttatgattct 174  Q
    ||||||||||||||||||| ||||||||  || ||||||  ||||||||| ||||||| ||| |||||||| ||||||    
T  19576182 ttgcaatttttatctgtttgcaacaaagtgaatttacctatttttggttgcagaaaagcaagcagcggttaggattct 19576105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 11 - 59
Target Start/End: Original strand, 5508386 - 5508434
Alignment:
Q  11 tatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||| | ||||||||||||||||||||||   |||||||||||||||    
T  5508386 tatccacatggattgtcgtttcgtccaaacatctcgcgttacttatttt 5508434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 8889210 - 8889150
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||| ||||||| | |||||||| |||||| | |||||| | |||||||||||||||    
T  8889210 tagagtattgtatccacagggattgtcctttcgttcgaacaattctcgttacttatttttg 8889150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 19167452 - 19167512
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | ||||| || |||||||| |||||| |  ||||||||||||||    
T  19167452 tagagtatcgtatccacatggattatcctttcgtccgaacaattctagttacttatttttg 19167512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 4 - 60
Target Start/End: Original strand, 19908351 - 19908407
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    ||||||||||||| |||| | ||||||||||||||||||| | ||| || |||||||    
T  19908351 agtatcgtatccacaagggtcgtcgtttcgtccaaacaattcacgtaacctattttt 19908407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 19909934 - 19909850
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagca-agttacctgttttg-gttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||| |||  || |||||  | |||||||||||  |||| ||||||||||| |||||||| |||||||||||||    
T  19909934 ttgcaatttttatctctttgtaaaaaagcgcatttacctgttttttgttgcagaaaagtaagcagcggttaggattctttgaatc 19909850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 3 - 256
Target Start/End: Complemental strand, 2874 - 2618
Alignment:
Q  3 gagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt---tgaacaattaaaacaaataaaagagttgaggcttagggat 99  Q
    |||||||||||||| | | |||||||||||||||||||||| || ||||||||||||   |  |||||  ||   |||||||||||| ||| |||| |||    
T  2874 gagtatcgtatccacatgaattgtcgtttcgtccaaacaattcgtgttacttattttgttttgacaatataat--aataaaagagttaagggttagagat 2777  T
Q  100 tgcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctattta-tttgtt 198  Q
    |||||||||||| | ||| ||||| |||||||||| || ||| |||||||||||||||  | |||||| || |||| |||||   |||||||| ||||||    
T  2776 tgcaatttttatttatttgcaacatagcaagttacatggttt-gttgtagaaaagtaaacaacggttaagactcttcgaatcctccctatttattttgtt 2678  T
Q  199 ggaattaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||||||||||||  || | |||||||||||| |||||||| ||||| |||||||    
T  2677 ggaattaaataacattcaggtcgcgtttagttatctttagtagactgtacaaatgatgag 2618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 253
Target Start/End: Original strand, 35578 - 35834
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt-gaacaattaaaacaaataaaagagttga-ggcttaggga 98  Q
    |||||||| ||||||| | ||||| |||||||||||||||||| ||| |||||||||||  |    || | ||  |||||||||||| | || |||| ||    
T  35578 tagagtattgtatccacatggattttcgtttcgtccaaacaattcgccttacttattttaagtttgatgataa--aataaaagagttaaagggttagaga 35675  T
Q  99 tt-gcaatttttatctgttttcaacaaagcaagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttatttgt 197  Q
    || ||||||||||| ||| | |||||||||||||||||||||||||||| ||||| ||||| |||||||| |||||||  |||| |   |||||||||||    
T  35676 tttgcaatttttatttgtctgcaacaaagcaagttacctgttttggttgcagaaaggtaagcagcggttaagattcttcaaatcccctatatttatttgt 35775  T
Q  198 tgga-attaaataacatt--catcacatttagttatcttaagtagactatacaagtgat 253  Q
    |||| ||||||||| | |   ||| | |||| |||||||| ||||||||||||||||||    
T  35776 tggatattaaataaaagtaatatcgcgtttatttatcttaggtagactatacaagtgat 35834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638 (Bit Score: 53; Significance: 2e-21; HSPs: 2)
Name: scaffold0638
Description:

Target: scaffold0638; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 97 - 254
Target Start/End: Complemental strand, 785 - 622
Alignment:
Q  97 gattgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat- 193  Q
    ||||||||||||||||||||| ||||| || ||||| ||||||||| ||||| |||||||||||||||||||| ||||||| ||| | |  || |||||     
T  785 gattgcaatttttatctgtttgcaacagagaaagtttacctgtttttggttgcagaaaagtaagaagcggttaagattcttcgaaccccctctgtttata 686  T
Q  194 ttgttgga-attaaataacattc--atcacatttagttatcttaagtagactatacaagtgatg 254  Q
    ||||| || |  |||||||| ||   ||||||||| ||||||||||||||||||||||||||||    
T  685 ttgttagatagcaaataacagtcttgtcacatttatttatcttaagtagactatacaagtgatg 622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0638; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 881 - 822
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattttt 60  Q
    |||||||||||||||||   ||||||||||||||||||||||| | ||||||||||||||    
T  881 tagagtatcgtatccattgagattgtcgtttcgtccaaacaatccacgttacttattttt 822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 74 - 252
Target Start/End: Complemental strand, 168284 - 168102
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgatt 172  Q
    ||||||||||  | ||| |||| |||| |||||||||||||||| ||||| |||||||||| || ||||||||||||||||| ||  | |||||| || |    
T  168284 aaataaaagacataagggttagagatttcaatttttatctgtttgcaacagagcaagttacttgtttttggttgtagaaaaggaaacaacggttaggact 168185  T
Q  173 ctttgaatctctcctatttat-ttgttgga-attaaataacattc--atcacatttagttatcttaagtagactatacaagtga 252  Q
    ||||||||| | ||| ||||| |||||||| | ||||||||||||   || | |||||||||||||| ||||||||||||||||    
T  168184 ctttgaatc-cccctgtttatattgttggataataaataacattctagtcgcgtttagttatcttaactagactatacaagtga 168102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 243
Target Start/End: Complemental strand, 35954 - 35806
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||||| |||  ||||||| |||||||||| ||||||||| ||||||||||| |||||||| ||||||| ||||| | ||||||||| |||    
T  35954 ttgcaatttttatctatttggaacaaagaaagttacctgattttggttgcagaaaagtaagcagcggttaggattcttagaatc-cccctatttatattg 35856  T
Q  197 ttgga-attaaataacattca--tcacatttagttatcttaagtagacta 243  Q
    ||||| ||||||||||| | |  |||| |||| |||||||| ||||||||    
T  35855 ttggatattaaataacaataatgtcacgtttatttatcttaggtagacta 35806  T

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Target: scaffold0155; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 36053 - 35995
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttt 59  Q
    |||||||||||||||| | | ||||||||||| |||||| ||| || ||||||||||||    
T  36053 tagagtatcgtatccacatgaattgtcgtttcatccaaataattcgtgttacttatttt 35995  T

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Target: scaffold0062 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 4 - 240
Target Start/End: Complemental strand, 43282 - 43042
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagagttgaggcttagggattgca 103  Q
    |||| |||||||| |||||||||||||||||| |||||   || ||||||||||||  |   |  | |  ||||||||||| | ||| |||| |||||||    
T  43282 agtaacgtatccacaaggattgtcgtttcgtctaaacagctcgtgttacttattttaaattgacgatataaaataaaagagataagggttagagattgca 43183  T
Q  104 atttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttgttgga 201  Q
    |||||||||||||| ||||| ||||||||||||| ||||||||  ||||||  ||  |||||||| || |||||||||| | ||| ||||| ||||||||    
T  43182 atttttatctgtttgcaacagagcaagttacctgtttttggttacagaaaacaaaatagcggttaagactctttgaatc-cccctgtttatattgttgga 43084  T
Q  202 -attaaataacattca--tcacatttagttatcttaagtaga 240  Q
     | | |||||||||||  |||  |||||||||||||||||||    
T  43083 taattaataacattcatgtcaagtttagttatcttaagtaga 43042  T

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Target: scaffold0671 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0671
Description:

Target: scaffold0671; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 569 - 652
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||||| ||| || |||||||||||||||| ||||||||||| |||||||| ||||||| |||||    
T  569 ttgcaatttttatctgtttgcaacagagcgaatttacctgttttggttgcagaaaagtaagcagcggttaggattcttcgaatc 652  T

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Target: scaffold0671; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 483 - 543
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| |||||||| |||||| |  |||| |||||||||    
T  483 tagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttaattatttttg 543  T

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Target: scaffold0035 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 4 - 61
Target Start/End: Original strand, 69957 - 70014
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||| || |||||||||||||||||||||||||| | |||||||||||||||    
T  69957 agtatcgtatacacaaggattgtcgtttcgtccaaacaattctcgttacttatttttg 70014  T

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Target: scaffold0035; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 70050 - 70128
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctt 175  Q
    ||||||||||||| ||||| ||| | |||||||| ||||||||| ||||||||||||||||| ||| |||| |||||||    
T  70050 ttgcaatttttatttgtttgcaatagagcaagtttacctgtttttggttgtagaaaagtaagcagcagttaggattctt 70128  T

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Target: scaffold0957 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0957
Description:

Target: scaffold0957; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 99 - 212
Target Start/End: Original strand, 3283 - 3398
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatctctcctatttat-ttg 196  Q
    ||||||||||||| |||||  || | ||||| ||||||||||| |||| |||||||||||| ||||||||||||| |||||||| | || |||||| |||    
T  3283 ttgcaatttttatttgtttgtaatagagcaatttacctgtttttggttatagaaaagtaagcagcggttatgattttttgaatc-cccccatttatgttg 3381  T
Q  197 ttgga-attaaataaca 212  Q
    ||||| |||||||||||    
T  3382 ttggatattaaataaca 3398  T

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Target: scaffold0238 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 161 - 216
Target Start/End: Original strand, 19311 - 19366
Alignment:
Q  161 gcggttatgattctttgaatctctcctatttatttgttggaattaaataacattca 216  Q
    ||||||||||||||||||||| |  |||||||||||||| ||||||||||||||||    
T  19311 gcggttatgattctttgaatcccctctatttatttgttgaaattaaataacattca 19366  T

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Target: scaffold0351 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 2)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 5731 - 5641
Alignment:
Q  92 ttagggattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||| ||||||||||||||||||||| ||| | | ||| ||||||| ||||||||||||||||| ||  | |||||| |||||||||||||    
T  5731 ttagagattgcaatttttatctgtttgcaatagaccaaattacctgtttttggttgtagaaaaggaaacaacggttaggattctttgaatc 5641  T

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Target: scaffold0351; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 181
Target Start/End: Complemental strand, 241 - 151
Alignment:
Q  92 ttagggattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||| ||||||||||||||||||||| ||||||| ||| ||| | | ||||||||| ||||||| ||  | |||||| || ||||||||||    
T  241 ttagagattgcaatttttatctgtttgcaacaaaccaaattatcggtttttggttgcagaaaaggaaacaacggttaggactctttgaatc 151  T

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Target: scaffold0056 (Bit Score: 38; Significance: 0.000000000002; HSPs: 2)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 25113 - 25190
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctt 175  Q
    ||||||||||| ||| ||| ||||| |||||||| |||||||||||||| ||||||||||| | |||||| |||||||    
T  25113 ttgcaatttttctctatttgcaacagagcaagtttacctgttttggttgcagaaaagtaagcaacggttaggattctt 25190  T

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Target: scaffold0056; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 21403 - 21486
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||| ||||| ||||| || ||||| |||||||||||||  ||||||||||| |||| ||| ||||||| |||||    
T  21403 ttgcaatttttatttgtttgcaacagaggaagtttacctgttttggtttcagaaaagtaagtagcgattaggattcttcgaatc 21486  T

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Target: scaffold0008 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 74 - 256
Target Start/End: Original strand, 54975 - 55161
Alignment:
Q  74 aaataaaagagttgaggcttagggattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgatt 172  Q
    |||||||| || | ||| |||| |||| |||||||||| ||||| | ||| ||||||||||||| ||||||||| | ||||| ||  |  ||||| || |    
T  54975 aaataaaaaagataagggttagagattccaatttttatttgtttgcgacatagcaagttacctgtttttggttgcacaaaagaaaacactggttaggact 55074  T
Q  173 ctttgaatctctcctatttat-ttgttgga-attaaataacattca--tcacatttagttatcttaagtagactatacaagtgatgag 256  Q
    ||||||||| | ||||||||| || ||||| | |||||||||||||  || | |||||| ||| |||||| |||||||||||||||||    
T  55075 ctttgaatc-cccctatttatattattggataataaataacattcatgtcgcgtttagtcatcctaagtatactatacaagtgatgag 55161  T

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Target: scaffold0263 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 15785 - 15868
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||  ||| ||||| ||||||||||||| |||||||||  |||||||||| ||||||||  |||||| |||||    
T  15785 ttgcaatttttatcaatttgcaacagagcaagttacctgtttttggttgcggaaaagtaagcagcggttagtattcttcgaatc 15868  T

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Target: scaffold0006 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 161 - 216
Target Start/End: Complemental strand, 222931 - 222876
Alignment:
Q  161 gcggttatgattctttgaatctctcctatttatttgttggaattaaataacattca 216  Q
    ||||||||||||||||||| |||  |||||||||||||| |||||||||| |||||    
T  222931 gcggttatgattctttgaacctcctctatttatttgttgaaattaaataaaattca 222876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0650 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0650
Description:

Target: scaffold0650; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 4 - 58
Target Start/End: Original strand, 6331 - 6385
Alignment:
Q  4 agtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    ||||||||||||| | ||||||| |||||||||||||||| ||| ||||||||||    
T  6331 agtatcgtatccacatggattgttgtttcgtccaaacaattcgcattacttattt 6385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 7 - 84
Target Start/End: Original strand, 78641 - 78717
Alignment:
Q  7 atcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttgaacaattaaaacaaataaaagag 84  Q
    ||||||||||||||||||||||||||  | || |||| ||||||||||||||   ||||| ||||| |||||||||||    
T  78641 atcgtatccataaggattgtcgtttcaacaaaccaatccgcgttacttatttggcaacaa-taaaataaataaaagag 78717  T

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Target: scaffold0016 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3572 - 3632
Alignment:
Q  1 tagagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttatttttg 61  Q
    |||||||||||||||| | |||||||| |||||||| |||||| |  ||||||||||||||    
T  3572 tagagtatcgtatccacatggattgtcctttcgtccgaacaattcttgttacttatttttg 3632  T

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Target: scaffold0002 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 92 - 181
Target Start/End: Original strand, 114620 - 114710
Alignment:
Q  92 ttagggattgcaatttttatctgttttcaacaaagcaagttacctg-ttttggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||| ||||| ||||||||||||||| ||||| | ||| ||||||| ||||||||| ||||||| ||  | |||||| || ||||||||||    
T  114620 ttagagattgtaatttttatctgtttgcaacagaccaaattacctgtttttggttgcagaaaaggaaacaacggttaggactctttgaatc 114710  T

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Target: scaffold0653 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0653
Description:

Target: scaffold0653; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 4540 - 4484
Alignment:
Q  2 agagtatcgtatccataaggattgtcgtttcgtccaaacaatacgcgttacttattt 58  Q
    ||||||||||||||| | |||||||| ||||||  ||||||| || |||||||||||    
T  4540 agagtatcgtatccacatggattgtcatttcgtttaaacaattcgtgttacttattt 4484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0386 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0386
Description:

Target: scaffold0386; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Complemental strand, 6066 - 5982
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagc-aagttacctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    ||||||||||||||||||| ||| | ||| || |||| |||||| ||||||||||||||||| | |||| | ||||||| |||||    
T  6066 ttgcaatttttatctgtttgcaatagagcgaatttacttgtttttggttgtagaaaagtaagtaacggtcaggattcttcgaatc 5982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 99 - 181
Target Start/End: Original strand, 76542 - 76626
Alignment:
Q  99 ttgcaatttttatctgttttcaacaaagcaagtt-acctgtttt-ggttgtagaaaagtaagaagcggttatgattctttgaatc 181  Q
    |||||| |||||| ||||| ||||| ||||| || ||||||||| ||||||||||||||||| | || ||| ||||||| |||||    
T  76542 ttgcaaattttatatgtttacaacatagcaaatttacctgtttttggttgtagaaaagtaagcaccgattaggattcttcgaatc 76626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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