View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7721_low_75 (Length: 313)
Name: NF7721_low_75
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7721_low_75 |
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Alignment Details
Target: chr8 (Bit Score: 283; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 283; E-Value: 1e-158
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 41161138 - 41161432
Alignment:
| Q |
1 |
cttctacaggttcttcctcaaatgctgtcctcaatgaagaatcttttgtggattttgtaaagaattactagtaatagtataaggataaatacagtttgat |
100 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41161138 |
cttctacaggttcttcctcaaatgctgtcctcaacgaagaatcttttgtggattttgtaaagaattactagtaatagtataaggataaatacagtttgat |
41161237 |
T |
|
| Q |
101 |
ctagagcatatatgaattattacttgcatctcctgtgttttatatcaagattcctatcgtgatcatcttcatcatagatacgcacatcaattagtagtga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
41161238 |
ctagagcatatatgaattattacttgcatctcctgtgttttatatcaagattcctatcgtgatcatcttcatcatagatacgcacatcaattagtagtga |
41161337 |
T |
|
| Q |
201 |
ttggattctttgtgaactgtaactgcacattttgtcaattttgatgatgcttgttacattactctttcatcagtatatgtaaacgttgtatcttg |
295 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
41161338 |
ttggattctttgtgaactgtaactgcacattatgtcaattttgatgatgcttgttacattactcattcatcagtatatgtaaacgttgtatcttg |
41161432 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 254 - 295
Target Start/End: Complemental strand, 3734436 - 3734395
Alignment:
| Q |
254 |
ttacattactctttcatcagtatatgtaaacgttgtatcttg |
295 |
Q |
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||||||||||| |||||||||||||||||| ||| ||||||| |
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| T |
3734436 |
ttacattactcattcatcagtatatgtaaatgttatatcttg |
3734395 |
T |
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