View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7721_low_87 (Length: 293)
Name: NF7721_low_87
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7721_low_87 |
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Alignment Details
Target: chr8 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 13 - 276
Target Start/End: Original strand, 30238224 - 30238489
Alignment:
| Q |
13 |
aatattatcttcattgtagcaacttccatcaccaaaagggtcacaattattattatnnnnnnnnnnnnnnnacttgctaatttgtgaagttgttgcactg |
112 |
Q |
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| T |
30238224 |
aatattatcttcattgtagcaacttccatcaccaaaagggtcacaattattattatcacacacacaacacaacttgctaatttgtgaagttgttgcactg |
30238323 |
T |
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| Q |
113 |
ctgttttggtatcattcagtgattgtgctagtgcttttctttcataataagctcgaatctgattacaaattcaatgaccattaattaatttgataaataa |
212 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
30238324 |
ctgttttggtatcattcagtgattgtgctagtgcttttctttcataataagctcgaatctgattacaaattcaatgaccattaattaatttgataaataa |
30238423 |
T |
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| Q |
213 |
ctattgt--nnnnnnnngtgacacaaattgatattcacaagtgataaattttcaagcaagacttac |
276 |
Q |
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| T |
30238424 |
ctattgtaataaaaaaagtgacacaaattgatattcacaagtgataaattttcaagcaagacttac |
30238489 |
T |
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