View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7721_low_95 (Length: 263)
Name: NF7721_low_95
Description: NF7721
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7721_low_95 |
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Alignment Details
Target: chr8 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 19 - 246
Target Start/End: Complemental strand, 4609022 - 4608795
Alignment:
| Q |
19 |
acagcagcatccgcagcggccgccgtagcagctgcaacagcaattgcatgtttgttctgttgattttctgtatcagcaatataggatctgagccaagaac |
118 |
Q |
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| T |
4609022 |
acagcagcatcagcagcggccgccgtagcagctgcaacagcaattgcatgtttgttctgttgattttctgtatcagcaatataggatctgagccaagaac |
4608923 |
T |
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| Q |
119 |
catcagaagatgaagtaggagtaatgttaggaggttccacttcaacattcttcccttgttttgcaaaactccatcttctcttctcctttttgatgtcagg |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4608922 |
catcagaagatgaagtaggagtaatgttaggaggttccacttcaacattcttcccttgttttgcaaaactccatcttctcttctcctttttgatgtcagg |
4608823 |
T |
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| Q |
219 |
tgtcaatgaacctgaattaatgtcactg |
246 |
Q |
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|||||||||||||||||| ||||||||| |
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| T |
4608822 |
tgtcaatgaacctgaattgatgtcactg |
4608795 |
T |
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