View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7722_low_19 (Length: 277)
Name: NF7722_low_19
Description: NF7722
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7722_low_19 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 19 - 265
Target Start/End: Original strand, 7762697 - 7762943
Alignment:
| Q |
19 |
aaaaaccacactttcctcttctcacaccaataatcccaaaaccattaacatcacaaaacgaaatcaccgccgcactcaaccacctccgcgccgctgaccc |
118 |
Q |
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|||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |
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| T |
7762697 |
aaaaaccacactttccccttctcacaccaataatccaaaaaccattaacatcacaaaacgaaatcaccgccgcactcaaccacctccgcgctgctgaccc |
7762796 |
T |
|
| Q |
119 |
actcctttccaccatcatcaacaccttccctccaccccaattctcaaactcaaacgctatcacacctttcttctctctcatcaaaacccttatctcccaa |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
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| T |
7762797 |
actcctttccaccatcatcaacaccttccctccaccccaattctcaaactcaaacgctatcacacctttcttctctctcatcaaaaccctaatctcccaa |
7762896 |
T |
|
| Q |
219 |
caactctccataaaagcatcctcttcaatcgaacaacgcttcatctc |
265 |
Q |
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||||||||||| ||||||||||||||||||||||||||||||||||| |
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| T |
7762897 |
caactctccatcaaagcatcctcttcaatcgaacaacgcttcatctc |
7762943 |
T |
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