View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7723_low_63 (Length: 235)
Name: NF7723_low_63
Description: NF7723
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7723_low_63 |
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Alignment Details
Target: chr7 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 11 - 220
Target Start/End: Original strand, 33181902 - 33182111
Alignment:
| Q |
11 |
agaatatatcaaactaatctcagcctcactgaaactccgttatcattttgaagcactagcttaatgacaatgcaagcgcatcttctagtgggaccaatct |
110 |
Q |
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|||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
33181902 |
agaaaatatcaaactaatctcagcctcaccgtaactccgttatcattttgaagcactagcttaatgacaatgcaagcgcatcttctagtgggacccatct |
33182001 |
T |
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| Q |
111 |
ccatcaccactcattctaccgccgctgattcttcctatctctccgcctcgcctcgccgccggagacatctactcatctcagcagcttcctcttcttcagc |
210 |
Q |
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||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33182002 |
ccatcaccactcattctaccgtcgctgattcttcctatctctccgcctcgcctcgtcgccggagacatctactcatctcagcagcttcctcttcttcagc |
33182101 |
T |
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| Q |
211 |
ttctgctatc |
220 |
Q |
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|||||||||| |
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| T |
33182102 |
ttctgctatc |
33182111 |
T |
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