View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7724_high_8 (Length: 299)

Name: NF7724_high_8
Description: NF7724
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7724_high_8
NF7724_high_8
[»] chr2 (24 HSPs)
chr2 (10-280)||(32127144-32127414)
chr2 (10-194)||(42439966-42440150)
chr2 (10-194)||(35962695-35962879)
chr2 (7-194)||(41251634-41251821)
chr2 (10-195)||(16405579-16405764)
chr2 (7-199)||(6403804-6403996)
chr2 (7-190)||(31581622-31581805)
chr2 (7-194)||(17445041-17445226)
chr2 (10-194)||(18981597-18981780)
chr2 (7-174)||(44084603-44084770)
chr2 (37-194)||(2958131-2958287)
chr2 (7-174)||(45418583-45418750)
chr2 (8-168)||(771005-771165)
chr2 (8-174)||(8147351-8147518)
chr2 (7-77)||(12756837-12756907)
chr2 (10-77)||(2285959-2286026)
chr2 (99-165)||(7072644-7072710)
chr2 (10-172)||(8059336-8059498)
chr2 (99-150)||(34905973-34906024)
chr2 (7-37)||(26238080-26238110)
chr2 (94-150)||(4555298-4555354)
chr2 (7-81)||(26162702-26162773)
chr2 (126-174)||(26237957-26238004)
chr2 (144-200)||(34523214-34523270)
[»] chr4 (37 HSPs)
chr4 (7-194)||(25930688-25930875)
chr4 (7-190)||(36382346-36382528)
chr4 (10-194)||(29319708-29319892)
chr4 (7-194)||(20129290-20129477)
chr4 (7-174)||(30216742-30216909)
chr4 (10-191)||(40528996-40529179)
chr4 (7-194)||(47500753-47500940)
chr4 (7-197)||(13012165-13012355)
chr4 (7-197)||(43143584-43143774)
chr4 (7-194)||(26439279-26439466)
chr4 (7-194)||(34407284-34407471)
chr4 (7-191)||(17511233-17511417)
chr4 (7-171)||(3292896-3293060)
chr4 (9-174)||(50205079-50205244)
chr4 (7-174)||(6690235-6690402)
chr4 (7-194)||(43355884-43356071)
chr4 (7-81)||(6235613-6235687)
chr4 (7-172)||(48989330-48989495)
chr4 (19-173)||(42333788-42333942)
chr4 (7-174)||(10352884-10353051)
chr4 (7-81)||(44156744-44156818)
chr4 (7-168)||(29995983-29996144)
chr4 (7-81)||(28877250-28877324)
chr4 (7-81)||(35546046-35546120)
chr4 (7-173)||(30077631-30077797)
chr4 (94-172)||(45194178-45194256)
chr4 (7-81)||(1817810-1817884)
chr4 (19-81)||(13392893-13392955)
chr4 (19-81)||(13396032-13396094)
chr4 (7-174)||(26448053-26448219)
chr4 (94-199)||(27363336-27363441)
chr4 (126-172)||(30109958-30110004)
chr4 (7-41)||(30110108-30110142)
chr4 (7-41)||(48130111-48130145)
chr4 (94-162)||(48129978-48130046)
chr4 (133-196)||(7769306-7769369)
chr4 (137-174)||(49908782-49908819)
[»] chr7 (18 HSPs)
chr7 (10-194)||(5555467-5555651)
chr7 (10-195)||(3114099-3114284)
chr7 (7-190)||(8394109-8394292)
chr7 (7-190)||(36630800-36630983)
chr7 (9-194)||(14777109-14777294)
chr7 (7-174)||(34389056-34389223)
chr7 (7-174)||(37002144-37002311)
chr7 (7-165)||(35090177-35090335)
chr7 (7-174)||(33685564-33685731)
chr7 (9-174)||(8867733-8867898)
chr7 (7-155)||(40920003-40920151)
chr7 (7-81)||(26624839-26624913)
chr7 (7-81)||(36658274-36658348)
chr7 (8-81)||(38638237-38638310)
chr7 (7-167)||(43184468-43184628)
chr7 (7-81)||(7002818-7002892)
chr7 (7-81)||(7048689-7048763)
chr7 (7-41)||(10868456-10868490)
[»] chr5 (20 HSPs)
chr5 (10-191)||(10033910-10034091)
chr5 (7-191)||(13817960-13818144)
chr5 (10-195)||(39657509-39657694)
chr5 (7-195)||(36293621-36293809)
chr5 (7-194)||(39434676-39434863)
chr5 (8-190)||(1776377-1776559)
chr5 (23-194)||(3155647-3155818)
chr5 (7-194)||(26283318-26283505)
chr5 (7-174)||(12278860-12279027)
chr5 (7-174)||(17332551-17332718)
chr5 (7-174)||(31680367-31680534)
chr5 (7-156)||(16155015-16155164)
chr5 (10-142)||(16333879-16334011)
chr5 (7-174)||(37254641-37254808)
chr5 (7-160)||(33430335-33430488)
chr5 (7-174)||(31501716-31501883)
chr5 (7-172)||(36291373-36291538)
chr5 (7-179)||(19985934-19986106)
chr5 (7-155)||(43068896-43069044)
chr5 (138-191)||(14316641-14316694)
[»] chr6 (9 HSPs)
chr6 (10-194)||(34948761-34948945)
chr6 (10-194)||(13837801-13837985)
chr6 (7-194)||(398597-398784)
chr6 (7-174)||(18339106-18339273)
chr6 (7-174)||(28996730-28996897)
chr6 (7-168)||(29743289-29743450)
chr6 (94-174)||(31028451-31028531)
chr6 (7-81)||(33229336-33229410)
chr6 (138-174)||(13647017-13647053)
[»] chr8 (13 HSPs)
chr8 (7-191)||(29728386-29728570)
chr8 (10-190)||(15838270-15838449)
chr8 (7-197)||(3648794-3648984)
chr8 (7-170)||(16788025-16788188)
chr8 (7-194)||(39914495-39914681)
chr8 (7-175)||(34136825-34136993)
chr8 (7-174)||(4404008-4404175)
chr8 (7-174)||(23402108-23402275)
chr8 (7-174)||(36408551-36408718)
chr8 (7-81)||(42231030-42231104)
chr8 (20-81)||(9877313-9877374)
chr8 (99-174)||(2729288-2729363)
chr8 (7-41)||(40470475-40470509)
[»] chr1 (12 HSPs)
chr1 (10-194)||(7433425-7433609)
chr1 (7-191)||(42310941-42311125)
chr1 (7-194)||(26144235-26144422)
chr1 (7-187)||(32982056-32982236)
chr1 (7-170)||(3828988-3829150)
chr1 (8-174)||(17445313-17445479)
chr1 (7-174)||(35907552-35907719)
chr1 (7-81)||(321377-321451)
chr1 (94-194)||(23313218-23313319)
chr1 (7-41)||(33489839-33489873)
chr1 (7-41)||(41972256-41972290)
chr1 (126-173)||(41972394-41972440)
[»] chr3 (19 HSPs)
chr3 (7-190)||(34084122-34084305)
chr3 (7-194)||(22968444-22968631)
chr3 (8-194)||(6269427-6269613)
chr3 (7-194)||(19390126-19390313)
chr3 (7-191)||(40081741-40081922)
chr3 (7-194)||(39771770-39771957)
chr3 (7-174)||(45182981-45183148)
chr3 (7-196)||(11018212-11018401)
chr3 (7-175)||(27935177-27935345)
chr3 (7-174)||(6930894-6931061)
chr3 (7-174)||(33040953-33041120)
chr3 (7-174)||(45335875-45336041)
chr3 (7-194)||(6503569-6503756)
chr3 (7-81)||(35514355-35514429)
chr3 (122-190)||(22922141-22922209)
chr3 (7-55)||(22922214-22922262)
chr3 (23-174)||(19565517-19565668)
chr3 (7-41)||(5135421-5135455)
chr3 (126-174)||(5354709-5354757)
[»] scaffold0069 (1 HSPs)
scaffold0069 (7-196)||(17820-18009)
[»] scaffold0002 (1 HSPs)
scaffold0002 (7-194)||(480457-480644)
[»] scaffold2142 (1 HSPs)
scaffold2142 (7-197)||(499-689)
[»] scaffold0502 (1 HSPs)
scaffold0502 (7-174)||(5230-5397)
[»] scaffold0041 (1 HSPs)
scaffold0041 (7-155)||(52944-53092)
[»] scaffold0154 (1 HSPs)
scaffold0154 (7-174)||(31480-31647)


Alignment Details
Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 10 - 280
Target Start/End: Original strand, 32127144 - 32127414
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||            ||||||||||||||||    
T  32127144 atgaacccgtcaatagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgcctaaatttttctttttgtaaatgtgttaatga 32127243  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggttatgtgcaaatat 209  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32127244 gcttttgggtcgagtttaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgccatacgctagaaccgcccatggttatgtgcaaatat 32127343  T
Q  210 ttataaccatttcaatgtaacttttatgcatgcatgccttttaacttcaactattatttagtactagatct 280  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32127344 ttataaccatttcaatgtaacttttatgcatgcatgccttttaacttcaactattatttagtactagatct 32127414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 42440150 - 42439966
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||| |||||||||||||||||||||||||| |||||  ||||||||||||||||||||||||||||||||            |||||||||||||||     
T  42440150 atgaatccgtcaatagtgtgctaaataaaattgcaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 42440051  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  42440050 gcttttgggtttagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatg 42439966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 35962879 - 35962695
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||            |||||||||||||| |    
T  35962879 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaataa 35962780  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||| |||||||| |||||||||||||| ||||||||||||||    
T  35962779 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcctggggtcgccatacggtagaaccgcccatg 35962695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 41251634 - 41251821
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  41251634 gagatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 41251733  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||| | | ||| ||||||||||||||    
T  41251734 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcactacacggtagaaccgcccatg 41251821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 195
Target Start/End: Complemental strand, 16405764 - 16405579
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||             |||||||||||||||    
T  16405764 atgaacccgtcaatagtgtgctaaataaaattccaagacttatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatga 16405665  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatgg 195  Q
    ||||||||||  ||| ||| ||||||||||||| ||| ||| |||||||||||||| ||||| ||||| | |||||||||||||||    
T  16405664 gcttttgggttgagtctaacgtgcaaaaattatcgattgagcccgggcgaccgcccagggtcaccatatggtagaaccgcccatgg 16405579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 199
Target Start/End: Original strand, 6403804 - 6403996
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  6403804 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 6403903  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggttat 199  Q
    ||| ||||| |||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||| | ||| | |||||||||||||||||    
T  6403904 tgaactttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatggttat 6403996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 190
Target Start/End: Original strand, 31581622 - 31581805
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||    
T  31581622 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 31581721  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcc 190  Q
    || |||||||||   ||| |||| |||||||| ||| | ||||| | ||||||||||||| |||||||||||  ||||||||||    
T  31581722 tgggcttttgggatgagtctaatatgcaaaaagtatcgctcgagcctgggcgaccgcccgtggtcgccatacagtagaaccgcc 31581805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 17445041 - 17445226
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  17445041 gagatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 17445140  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || ||||||||||  ||| ||  ||||||||||||| |||||||  |||||||||||||| |||||||| ||| ||||||||||||||    
T  17445141 tgggcttttgggttgagtcta--gtgcaaaaattatcgatcgagctcgggcgaccgcccgaggtcgccacacggtagaaccgcccatg 17445226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 18981780 - 18981597
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||| ||||||||||||||||||||||||  |||||||||||||||||||| | |||||||||            |||||||| ||||||     
T  18981780 atgaacccgtcaacagtgtgctaaataaaattccaagacctatttgcgtgtgacaatttttaaattgcccaaatttttctttttgtaaatgttttaatgg 18981681  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
     |||||||||  ||| |||||||||||||||||  |||||| |||| ||||||||| ||||||||||||| ||||||||||||||    
T  18981680 acttttgggttgagtctaatgtgcaaaaattatcaatcgagcccggacgaccgccc-gggtcgccatacggtagaaccgcccatg 18981597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 44084603 - 44084770
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||  |||  ||||||||| ||| ||||||||||||||||||            |||| ||||||||    
T  44084603 gagatgaacccgtcaatagtgtgctaaataaaattctgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 44084702  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    ||| ||||||| |   |||||||||||||||||||| ||||||| ||||||||| |||||||||||||    
T  44084703 tgaacttttggattgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccggggtcgcc 44084770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 37 - 194
Target Start/End: Original strand, 2958131 - 2958287
Alignment:
Q  37 aaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaa 136  Q
    |||||||||||  |||||||||||||||||||||||||| |||||            ||||||||||||||| ||||||||||  ||| |||||||||||    
T  2958131 aaattccaagacctatttgcgtgtgacaattttcagattacccaaatttttctctttgtaaatgtgttaatgggcttttgggttgagtctaatgtgcaaa 2958230  T
Q  137 aattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    | |||| ||||||| |||| ||||||||||||||||||||||| ||||||||||||||    
T  2958231 a-ttatcgatcgagcccggacgaccgcccggggtcgccatacggtagaaccgcccatg 2958287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 45418750 - 45418583
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  45418750 gagatgaacccgtcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 45418651  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||    | ||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  45418650 ttggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45418583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 8 - 168
Target Start/End: Complemental strand, 771165 - 771005
Alignment:
Q  8 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaat 107  Q
    ||||||||||||||||| ||||||||||||| |||| |||  ||||||||||||| ||||||||||||||||||            |||| |||||||||    
T  771165 agatgaacccgtcaataatgtgctaaataaagttccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 771066  T
Q  108 gagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggg 168  Q
    | |||||| |||   || |||||||||||| |||| ||||||| |||||||||||||||||    
T  771065 gggctttttggttgggtctaatgtgcaaaagttatcgatcgagcccgggcgaccgcccggg 771005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 8147518 - 8147351
Alignment:
Q  8 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaa-ttttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||||||| ||||||||||||| |||| ||||||||||||| || ||||||||||||||||            |||| ||||||||    
T  8147518 agatgaacccgtcaatagtgtgttaaataaaattccgagatctatttgcgtgtgagaatttttcagattgcccaaatttttctttttgtaagtgtgttaa 8147419  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |   |||||| ||   || ||||||||||| ||||| ||||||| |||||||||||||||||||||||    
T  8147418 ttgacttttgagttgggtctaatgtgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 8147351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 7 - 77
Target Start/End: Original strand, 12756837 - 12756907
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgc 77  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||    
T  12756837 gagatgaacccgtcaatagtgtgctaaataaaattccgagacttatttgcgtgtgagaattttcagattgc 12756907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 10 - 77
Target Start/End: Complemental strand, 2286026 - 2285959
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgc 77  Q
    |||||| ||||||||||||||||||||||||||||| |  ||||||||||||||||||||||||||||    
T  2286026 atgaacacgtcaatagtgtgctaaataaaattccaaaacctatttgcgtgtgacaattttcagattgc 2285959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 99 - 165
Target Start/End: Original strand, 7072644 - 7072710
Alignment:
Q  99 tgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgccc 165  Q
    |||||||||| ||||||||||  ||||||||||  ||||||||| ||||||| ||||||||||||||    
T  7072644 tgtgttaatgggcttttgggttgagtttaatgtaaaaaaattatcgatcgagcccgggcgaccgccc 7072710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 172
Target Start/End: Original strand, 8059336 - 8059498
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    |||||||||||||| ||||||||||||||||||| |||   ||||| |||||| |||||||| |||| ||||            |||| |||||||||      
T  8059336 atgaacccgtcaattgtgtgctaaataaaattccgagaccgatttgtgtgtgagaattttcaaattggccaaatttttctttttgtaagtgtgttaattg 8059435  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 172  Q
    ||||||||||  | | ||||||||||||||||| ||| ||| | |||||| || |||||||||    
T  8059436 gcttttgggttgactctaatgtgcaaaaattatcgattgagcctgggcgatcggccggggtcg 8059498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 99 - 150
Target Start/End: Complemental strand, 34906024 - 34905973
Alignment:
Q  99 tgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgag 150  Q
    |||||||||| |||||||||| | | |||||||||||||||||| |||||||    
T  34906024 tgtgttaatgggcttttgggttaggcttaatgtgcaaaaattatcgatcgag 34905973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 37
Target Start/End: Complemental strand, 26238110 - 26238080
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataa 37  Q
    |||||||||||||||||||||||||||||||    
T  26238110 gagatgaacccgtcaatagtgtgctaaataa 26238080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 94 - 150
Target Start/End: Original strand, 4555298 - 4555354
Alignment:
Q  94 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgag 150  Q
    |||| |||||||| ||||||||||||   |||| ||||||||||||||| |||||||    
T  4555298 gtaagtgtgttaacgagcttttgggttgggtttgatgtgcaaaaattatcgatcgag 4555354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 26162702 - 26162773
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||||||||||||| ||||||||||||   ||| |||  |||||| || ||| |||||| |||||||||||    
T  26162702 gagatgaacccgtcaataatgtgctaaataa---tccgagacctatttgtgtttgagaatttttagattgcccaa 26162773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 26238004 - 26237957
Alignment:
Q  126 taatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |||| ||||||||| || ||||||| |||||||||||||||||||||||    
T  26238004 taatttgcaaaaat-atcgatcgagcccgggcgaccgcccggggtcgcc 26237957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 200
Target Start/End: Complemental strand, 34523270 - 34523214
Alignment:
Q  144 gatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggttatg 200  Q
    ||||||| |||||||||||||||||||||||   || || |||||||| ||||||||    
T  34523270 gatcgagcccgggcgaccgcccggggtcgccgggcggtaaaaccgcccctggttatg 34523214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 25930875 - 25930688
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||            |||||||||||||    
T  25930875 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 25930776  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || ||||||||||  ||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||| ||||||||||||||    
T  25930775 tgggcttttgggttgagtttaatgtgcaaaaattatagatcgagcccgggcgaccgcccagggtcgccatacggtagaaccgcccatg 25930688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 7 - 190
Target Start/End: Original strand, 36382346 - 36382528
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||            |||||||||||||    
T  36382346 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgtccaaatttttctttt-gtaaatgtgttaa 36382444  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcc 190  Q
    ||  ||||| |||  ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  36382445 tggactttttggttgagtttaatgtgcaaaaattatggatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 36382528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 29319708 - 29319892
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| ||||||||||||||||||||| |||            |||||||||||||||     
T  29319708 atgaacccgtcaatagtgtgctaaataaaattccaagacttatttgtgtgtgacaattttcagattgctcaaatttttctttttgtaaatgtgttaatgg 29319807  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    | ||||||||  ||| ||||||||||||||||| ||||||| | || |||||||| |||||| ||||||| ||||||||||||||    
T  29319808 gattttgggttgagtctaatgtgcaaaaattatcgatcgagcctggacgaccgccaggggtcaccatacggtagaaccgcccatg 29319892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 20129477 - 20129290
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||| ||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  20129477 gagatgaaactgtcaatagtgtgccaaataaaattctaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 20129378  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||| | ||| | ||||||||||||    
T  20129377 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 20129290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 30216742 - 30216909
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||| ||||||||||||||||||            |||| ||||||||    
T  30216742 gagatgaacccgtcaatagtgtgctaaataaaattccgagatctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 30216841  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    | |||||||||||   || ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  30216842 ttagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 30216909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 40529179 - 40528996
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||| |||||||||||||| |||| ||||            ||||||||||||||||    
T  40529179 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcatgtgacaattttcaaattgtccaaatttttctttttgtaaatgtgttaatga 40529080  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgac--cgcccggggtcgccatacgctagaaccgccc 191  Q
    | |||| |||  ||||||||||||||||||||| ||||||| |||| ||||  ||||| ||||||||||||| |||||||||||    
T  40529079 gtttttaggttgagtttaatgtgcaaaaattatcgatcgagtccggacgacctcgcccagggtcgccatacggtagaaccgccc 40528996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 47500940 - 47500753
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  47500940 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttcttttcataaatgtgttaa 47500841  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||| | ||| | ||||||||||||    
T  47500840 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 47500753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 13012355 - 13012165
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  13012355 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 13012256  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggtt 197  Q
    ||||||||| |||  | | ||||||||||||||||| ||||||| |||||||||||||||||||||| | ||| | |||||||||||||||    
T  13012255 tgagctttttggttgaatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatggtt 13012165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 43143584 - 43143774
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||| ||||| ||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  43143584 gagatgaacccatcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 43143683  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggtt 197  Q
    |  ||||||||||  ||| ||||||||||||||||| ||||||| ||||||||||||||||||||| |  ||| |  ||||||||||||||    
T  43143684 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcggacggtgaaaccgcccatggtt 43143774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 26439279 - 26439466
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||  |||||||||| |||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  26439279 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 26439378  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || ||||||||||  ||| ||||||||||||||||| || |||| |||||||||||||||||||||| | ||| | ||||||||||||    
T  26439379 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 26439466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 34407284 - 34407471
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||  |||||||||| |||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  34407284 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 34407383  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || ||||||||||  ||| ||||||||||||||||| || |||| |||||||||||||||||||||| | ||| | ||||||||||||    
T  34407384 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 34407471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 17511233 - 17511417
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaatt-ccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgtta 105  Q
    ||||||||||  |||||| |||||||||||||||| ||||||  ||||||||||| |||||||||| |||||||||            ||||||||||||    
T  17511233 gagatgaaccgatcaataatgtgctaaataaaatttccaagacctatttgcgtgtaacaattttcaaattgcccaaatttttctttttgtaaatgtgtta 17511332  T
Q  106 atgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgccc 191  Q
    ||| ||||||||||  ||| ||||||||||||||||| ||||||| | ||||||||| || ||||||||||||| |||||||||||    
T  17511333 atgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagtctgggcgaccg-ccagggtcgccatacggtagaaccgccc 17511417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 171
Target Start/End: Original strand, 3292896 - 3293060
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  3292896 gagatgaactcgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 3292995  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtc 171  Q
    |  ||||||||||   || ||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  3292996 ttggcttttgggttgggtctaatgggcaaaaattatcgatcgagcccgggcgaccgcccggggtc 3293060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 50205079 - 50205244
Alignment:
Q  9 gatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatg 108  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||| ||||            |||| |||||||||     
T  50205079 gatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgtccaattttttctttttgtaagtgtgttaatt 50205178  T
Q  109 agcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
     ||||||||||    | ||||||||||||||||| |||||||  |||||||||||||||| |||||    
T  50205179 ggcttttgggttggatctaatgtgcaaaaattatcgatcgagctcgggcgaccgcccgggatcgcc 50205244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 6690235 - 6690402
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||| |||||||||||||||||||||||||||||| | |||  ||||||||||||| ||||||||| ||||||||            |||| ||||||||    
T  6690235 gagacgaacccgtcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagtttgcccaaatttttctttttgtaagtgtgttaa 6690334  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||   || ||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  6690335 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 6690402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 43356071 - 43355884
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||  |||||||||| |||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  43356071 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 43355972  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || ||||||||||  ||| ||||||||||||||||| || |||| ||||||||| ||| |||||||| | ||| | ||||||||||||    
T  43355971 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgactgcctggggtcgctacacggtggaaccgcccatg 43355884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 6235687 - 6235613
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||    
T  6235687 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaa 6235613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 48989495 - 48989330
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||| ||| ||||||||||||||||||            |||| ||||||||    
T  48989495 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 48989396  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 172  Q
    ||  |||||| ||   |||||||||||||||||||| ||||||  ||||  |||||||||| ||||    
T  48989395 tggacttttgagttgggtttaatgtgcaaaaattatcgatcgaacccggttgaccgcccggagtcg 48989330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 173
Target Start/End: Original strand, 42333788 - 42333942
Alignment:
Q  19 tcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatgagcttttggg 118  Q
    ||||| ||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| |||||||||  |||||||||    
T  42333788 tcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaattggcttttggg 42333887  T
Q  119 tcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 173  Q
    |  ||| ||||||||||||||||| ||| ||| |||| |||||||||||| ||||    
T  42333888 ttgagtctaatgtgcaaaaattatcgattgagcccggacgaccgcccgggatcgc 42333942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 10352884 - 10353051
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| ||| || | ||||||||||||||||||| |||  ||||||||||| | ||||||||||||||||||            |||||||||||||    
T  10352884 gagatgaatccgacactggtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttccttttgtaaatgtgttaa 10352983  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    ||  ||||| |||   || ||||||||||||||||| ||| ||| ||||||||||||| |||||||||    
T  10352984 tggactttttggttgggtctaatgtgcaaaaattatcgattgagcccgggcgaccgccaggggtcgcc 10353051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 44156818 - 44156744
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||||||| || ||||||||||||| ||||    
T  44156818 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgagagaattttcagattgtccaa 44156744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 7 - 168
Target Start/End: Original strand, 29995983 - 29996144
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| |||||||||||||||| ||||||||||| |||  ||||||||||  | ||||||||||||||||||            |||||||||||||    
T  29995983 gagatgaatccgtcaatagtgtgcttaataaaattccgagaactatttgcgtgcaagaattttcagattgcccaaatttttcttttcgtaaatgtgttaa 29996082  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggg 168  Q
    ||  ||||| |||  ||| |||||| |||||||||| ||||||| |||| |||||| |||||    
T  29996083 tggactttttggttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgtccggg 29996144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 28877250 - 28877324
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    ||||||||||| ||||||||||||||||||||||||| |||  ||||||||||||| |||||| ||||| |||||    
T  28877250 gagatgaacccatcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagatttcccaa 28877324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 35546120 - 35546046
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    ||||||||||| ||||||||||||||||||||||||  |||   |||||||||||| ||||||||||||||||||    
T  35546120 gagatgaacccatcaatagtgtgctaaataaaattcagagacccatttgcgtgtgagaattttcagattgcccaa 35546046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 173
Target Start/End: Original strand, 30077631 - 30077797
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| ||| || ||||||||||||||||||| |||||  |||||| |||| | ||||||||||||| ||||            |||||||||||||    
T  30077631 gagatgaatccggcactagtgtgctaaataaaatttcaagacctatttgtgtgtaaaaattttcagattgtccaaatttttctttttgtaaatgtgttaa 30077730  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 173  Q
    ||| ||||| |||   || |||||||||||| |||| ||| ||| | ||||||||||||| ||||||    
T  30077731 tgaactttttggttgggtctaatgtgcaaaatttatcgattgagcctgggcgaccgcccgaggtcgc 30077797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 94 - 172
Target Start/End: Complemental strand, 45194256 - 45194178
Alignment:
Q  94 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 172  Q
    |||| ||||||||||  |||||||||  ||||||||||||||||||||||||||||| |||||| | |||| |||||||    
T  45194256 gtaagtgtgttaatggacttttgggttgagtttaatgtgcaaaaattattgatcgagtccgggcaatcgcctggggtcg 45194178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 1817884 - 1817810
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||| ||| |||||||||| ||||||||||||| |||  ||||||||||| | |||||| |||||||||||    
T  1817884 gagatgaatccgacaatagtgtgttaaataaaattccgagacctatttgcgtgtaagaatttttagattgcccaa 1817810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 13392893 - 13392955
Alignment:
Q  19 tcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    ||||||||||||||||||||||| | |||  ||||||||||||| |||||| |||||||||||    
T  13392893 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaa 13392955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 81
Target Start/End: Original strand, 13396032 - 13396094
Alignment:
Q  19 tcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    ||||||||||||||||||||||| | |||  ||||||||||||| |||||| |||||||||||    
T  13396032 tcaatagtgtgctaaataaaatttcgagacctatttgcgtgtgagaatttttagattgcccaa 13396094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 26448219 - 26448053
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||| || ||| |||||||||||||||||||||||| | |  |||||| || ||| ||||||||||||||||||            |||| ||||||||    
T  26448219 gagataaatccgccaatagtgtgctaaataaaattccgaaacctatttgtgtatgagaattttcagattgcccaa-attttttttttgtaagtgtgttaa 26448121  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    ||  ||||||||| |  ||||||||||||||||||| ||||||| |||| ||| ||| ||| ||||||    
T  26448120 tggacttttgggttagatttaatgtgcaaaaattatcgatcgagtccggacgatcgcacggagtcgcc 26448053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 199
Target Start/End: Complemental strand, 27363441 - 27363336
Alignment:
Q  94 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccat 193  Q
    |||| |||||||||| ||||||||||   |  |||| ||||||||   | ||||||| ||||||||||||||| |||||||||||| || |||||||| |    
T  27363441 gtaagtgtgttaatgggcttttgggttgggcctaatatgcaaaaaaattcgatcgagcccgggcgaccgcccgaggtcgccatacggtaaaaccgcccct 27363342  T
Q  194 ggttat 199  Q
    ||||||    
T  27363341 ggttat 27363336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 126 - 172
Target Start/End: Complemental strand, 30110004 - 30109958
Alignment:
Q  126 taatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 172  Q
    ||||||||||||||||| ||||||| ||||||||||| |||||||||    
T  30110004 taatgtgcaaaaattatcgatcgagtccgggcgaccgtccggggtcg 30109958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 30110142 - 30110108
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaatt 41  Q
    |||||||||||||||||||||||||||||||||||    
T  30110142 gagatgaacccgtcaatagtgtgctaaataaaatt 30110108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 48130145 - 48130111
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaatt 41  Q
    |||||||||||||||||||||||||||||||||||    
T  48130145 gagatgaacccgtcaatagtgtgctaaataaaatt 48130111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 94 - 162
Target Start/End: Complemental strand, 48130046 - 48129978
Alignment:
Q  94 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccg 162  Q
    |||| |||||||||||||||||||||   || |||| |||||||||||| ||||||| |||| ||||||    
T  48130046 gtaagtgtgttaatgagcttttgggttgggtctaatatgcaaaaattatcgatcgagcccggtcgaccg 48129978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 133 - 196
Target Start/End: Complemental strand, 7769369 - 7769306
Alignment:
Q  133 caaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggt 196  Q
    |||||||||| ||||||| ||||||||||||| |||||||||  ||| |  |||||||||||||    
T  7769369 caaaaattatcgatcgagcccgggcgaccgcctggggtcgccggacggtgaaaccgcccatggt 7769306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 174
Target Start/End: Original strand, 49908782 - 49908819
Alignment:
Q  137 aattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |||||| ||||||| |||||||||||||||||||||||    
T  49908782 aattatcgatcgagcccgggcgaccgcccggggtcgcc 49908819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 105; Significance: 2e-52; HSPs: 18)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 5555651 - 5555467
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||            ||||||| |||||||     
T  5555651 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgcgttaatgg 5555552  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  5555551 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcccatg 5555467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 3114099 - 3114284
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  |||||| |||||||||||||||||||||||||            |||||||||||||||     
T  3114099 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 3114198  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatgg 195  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| ||||||||||| |||||||| ||||||| |||||||||||||||    
T  3114199 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcaccatacggtagaaccgcccatgg 3114284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 7 - 190
Target Start/End: Complemental strand, 8394292 - 8394109
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||| |||||||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  8394292 gagataaacccgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttccttttgtaaatgtgttaa 8394193  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcc 190  Q
    ||  ||||| |||  ||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  8394192 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgccatacggtagaaccgcc 8394109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 7 - 190
Target Start/End: Complemental strand, 36630983 - 36630800
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||| |||||||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||    
T  36630983 gagatgaacccgtcaatagtgtgctaactaaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 36630884  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcc 190  Q
    ||  ||||| |||  ||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||| ||||||||||    
T  36630883 tggactttttggttgagtttaatgtgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgccatacggtagaaccgcc 36630800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 9 - 194
Target Start/End: Original strand, 14777109 - 14777294
Alignment:
Q  9 gatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatg 108  Q
    |||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||||    
T  14777109 gatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatg 14777208  T
Q  109 agcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    |||||||||||  ||| ||||||||||||||||| ||||||| ||||||||||||||||| |||| | ||| ||||||||||||||    
T  14777209 agcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtagaaccgcccatg 14777294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 34389056 - 34389223
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||| ||| |||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  34389056 gagatgaacccgtcgataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 34389155  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    | |||||||||||   || ||||||||||||||||| ||||||| |||||||||||||||||||||||    
T  34389156 ttagcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 34389223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 37002144 - 37002311
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  37002144 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 37002243  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |   ||||||| |   || ||||||||||||||||| |||||||||||  ||||||||||||||||||    
T  37002244 ttgacttttggattgggtctaatgtgcaaaaattatcgatcgagaccgaacgaccgcccggggtcgcc 37002311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 7 - 165
Target Start/End: Complemental strand, 35090335 - 35090177
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| |||||||||||||||||||||||||||| |||  ||||||||||||| |||||||||||| |||||            |||| ||||||||    
T  35090335 gagatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaatttttctttttgtaagtgtgttaa 35090236  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgccc 165  Q
    |  ||||||||||   || ||||||||||||||||||||||||| ||||||||||||||    
T  35090235 ttggcttttgggttgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgccc 35090177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 33685731 - 33685564
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||| |||||||||||||||||||||||||||||   ||| |||||||||| ||| ||||||||||||||||||            |||| ||||||||    
T  33685731 gagataaacccgtcaatagtgtgctaaataaaattatgagacatatttgcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 33685632  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    || ||||||||||   |||||||||||||||||||| ||||||| ||| ||||| ||| |||||||||    
T  33685631 tgggcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgagcgactgcctggggtcgcc 33685564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 9 - 174
Target Start/End: Original strand, 8867733 - 8867898
Alignment:
Q  9 gatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatg 108  Q
    |||||| |||||||||||||||||||||||||||| |||  ||||||||||||| ||||||| ||||||||||            |||||||| |||||     
T  8867733 gatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttccgattgcccaaatttttctttttgtaaatgtattaatt 8867832  T
Q  109 agcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
     |||||||| |   || |||| |||||||||||| ||||||| |||||||||||||||||||||||    
T  8867833 ggcttttggattgggtctaatatgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 8867898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 155
Target Start/End: Original strand, 40920003 - 40920151
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||| ||||            |||||||||||||    
T  40920003 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaa 40920102  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgg 155  Q
    |  |||||||||| || | ||||||||||||||||| ||||||| ||||    
T  40920103 ttggcttttgggttaaatctaatgtgcaaaaattatcgatcgagcccgg 40920151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 26624913 - 26624839
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||    
T  26624913 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaa 26624839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 36658348 - 36658274
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||    
T  36658348 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaa 36658274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 8 - 81
Target Start/End: Original strand, 38638237 - 38638310
Alignment:
Q  8 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||    
T  38638237 agatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaa 38638310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 7 - 167
Target Start/End: Original strand, 43184468 - 43184628
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||            |||| | ||||||    
T  43184468 gagatgaacccgtcaatagtgtgctaaataaaattcagagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtatgttaa 43184567  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccgg 167  Q
    |  |||||||||| |||| | ||| | ||||||||| ||||||| ||| ||||||||||||    
T  43184568 ttggcttttgggttaagtctgatgcgtaaaaattatcgatcgagcccgagcgaccgcccgg 43184628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 7002892 - 7002818
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||||| |||||| ||||    
T  7002892 gagatgaacccgtcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaa 7002818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 7048763 - 7048689
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||||||||||||||||||||||||||||||||  ||  ||||||||||||| |||||| |||||| ||||    
T  7048763 gagatgaacccgtcaatagtgtgctaaataaaattccgtgacctatttgcgtgtgagaatttttagattgtccaa 7048689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 10868456 - 10868490
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaatt 41  Q
    |||||||||||||||| ||||||||||||||||||    
T  10868456 gagatgaacccgtcaaaagtgtgctaaataaaatt 10868490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 1e-50; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 10 - 191
Target Start/End: Complemental strand, 10034091 - 10033910
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||||     
T  10034091 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 10033992  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgccc 191  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| |||||||| || |||||||||||||||| |||||||||||    
T  10033991 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtccggggtcgccatacggtagaaccgccc 10033910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 7 - 191
Target Start/End: Complemental strand, 13818144 - 13817960
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||| |||||||||||||||||||||||| ||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||    
T  13818144 gagatgagcccgtcaatagtgtgctaaataaatttccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 13818045  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgccc 191  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| |||||||||||    
T  13818044 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgagcgaccgcccggggtcgccatacggtagaaccgccc 13817960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 10 - 195
Target Start/End: Original strand, 39657509 - 39657694
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            ||||||||||||||||    
T  39657509 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatga 39657608  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatgg 195  Q
    ||||||||||  ||| |||||||||||||||||  |||||| |||  |||||| | ||||||||||||   |||||||||||||||    
T  39657609 gcttttgggttgagtctaatgtgcaaaaattatcaatcgagcccgaacgaccgtctggggtcgccatatagtagaaccgcccatgg 39657694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 195
Target Start/End: Original strand, 36293621 - 36293809
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | || |||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  36293621 gagatgaaactgtaaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 36293720  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatgg 195  Q
    || ||||||||||  ||| |||||| |||||||||| ||||||| |||| ||||||| ||||||||||| ||| |||||||||||||||    
T  36293721 tgggcttttgggttgagtctaatgtacaaaaattatcgatcgagtccggacgaccgctcggggtcgccacacggtagaaccgcccatgg 36293809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 39434863 - 39434676
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||||||||||||||| ||||  ||||| | ||||||||||||||||||||||||            |||||||||||||    
T  39434863 gagatgaaactgtcaatagtgtgctaaataaaattcaaagacctatttacatgtgacaattttcagattgcccaaatttttcattttgtaaatgtgttaa 39434764  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || ||||||||||  ||| ||||||| ||||||||| ||||||| |||||||||||||| ||||||||| ||| ||||||||||||||    
T  39434763 tgggcttttgggttgagtctaatgtgaaaaaattatcgatcgagcccgggcgaccgcccagggtcgccacacggtagaaccgcccatg 39434676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 8 - 190
Target Start/End: Original strand, 1776377 - 1776559
Alignment:
Q  8 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaat 107  Q
    ||||||||| ||| ||||||||||||||||||||||||||  |||||||||||||||||||||| |||||||||            ||||||||||||||    
T  1776377 agatgaacctgtcgatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaat 1776476  T
Q  108 gagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcc 190  Q
    |  ||||| |||  | |||||||| |||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||    
T  1776477 ggactttttggttgactttaatgtacaaaaattatcgatcgagcccgggcgaccgcccggggtcgtcatacggtagaaccgcc 1776559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 23 - 194
Target Start/End: Original strand, 3155647 - 3155818
Alignment:
Q  23 tagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatgagcttttgggtcaa 122  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||             ||||||||||||||  ||||| |||  |    
T  3155647 tagtgtgctaaataaaattccaagatctatttgcgtgtgacaattttcagattgtccaaatttttctttttataaatgtgttaatggacttttaggttga 3155746  T
Q  123 gtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||  |||||||||||||||||||||||| ||| ||||||||||||| |||||||||| ||||||||||||||    
T  3155747 gtcgaatgtgcaaaaattattgatcgagcccgagcgaccgcccgggatcgccatacgatagaaccgcccatg 3155818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 26283318 - 26283505
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  26283318 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 26283417  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||| ||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||| |||||| | ||| | ||||||||||||    
T  26283418 tgaactttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgctacacggtggaaccgcccatg 26283505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 12278860 - 12279027
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||| |||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  12278860 gagatgaacctgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 12278959  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  || |||||||   || ||||||||||||||||| ||||||| ||||||||||||||||| |||||    
T  12278960 ttggcctttgggttgggtctaatgtgcaaaaattatcgatcgagtccgggcgaccgcccgggatcgcc 12279027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 17332551 - 17332718
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| |||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  17332551 gagatgaatccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaa 17332650  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||   || |||| |||||||||||| ||||||| |||||||| ||||||||||||||    
T  17332651 ttggcttttgggttgggtctaatatgcaaaaattatcgatcgagcccgggcgaacgcccggggtcgcc 17332718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 31680534 - 31680367
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||||||||            |||| ||||||||    
T  31680534 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 31680435  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||   || ||||| | ||||||||| ||||||| |||||||||||||||||||||||    
T  31680434 ttggcttttgggttgggtctaatgcggaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 31680367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 7 - 156
Target Start/End: Complemental strand, 16155164 - 16155015
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||| ||             ||||||||||||    
T  16155164 gagatgaatctgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcctaaatttttctttttataaatgtgttaa 16155065  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccggg 156  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| |||||    
T  16155064 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggg 16155015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 10 - 142
Target Start/End: Original strand, 16333879 - 16334011
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||| ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            |||||||||||||||     
T  16333879 atgaatccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 16333978  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattat 142  Q
    ||||||||||  | | |||||||||||||||||    
T  16333979 gcttttgggttgaatctaatgtgcaaaaattat 16334011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 37254808 - 37254641
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||| |||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  37254808 gagatgaacccgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 37254709  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |   |||||||||   || ||||||||||||||||| ||||||| | ||||||||||| |||||||||    
T  37254708 ttgacttttgggttgggtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgcc 37254641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 7 - 160
Target Start/End: Complemental strand, 33430488 - 33430335
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  33430488 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 33430389  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgac 160  Q
    |  ||||||||||   || ||||| ||||||||||| ||||||| |||||||||    
T  33430388 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgac 33430335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 31501716 - 31501883
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||| | ||||||||||||||||||||||| | |||  |||||||||| || ||||||||||||||||||            |||| ||||||||    
T  31501716 gagatgaactcatcaatagtgtgctaaataaaatttcgagacctatttgcgtgcgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 31501815  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||   || ||||||||||||||||| ||||||| |||||| | ||||||||||||||    
T  31501816 ttggcttttgggttgggtctaatgtgcaaaaattatcgatcgagcccgggcaatcgcccggggtcgcc 31501883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 172
Target Start/End: Complemental strand, 36291538 - 36291373
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||| ||||||||||||  |||  |||||| |||| | |||||| |||||||||||            |||||||||||||    
T  36291538 gagatgaacccgtcaatagtgtgttaaataaaattctgagacctatttgtgtgtaataattttgagattgcccaaatttttctttttgtaaatgtgttaa 36291439  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcg 172  Q
    ||| ||||| ||| |  | ||||||||||||||||||||||||  |||| ||||||||||| ||||    
T  36291438 tgaacttttaggttagatctaatgtgcaaaaattattgatcgaacccggacgaccgcccggagtcg 36291373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 7 - 179
Target Start/End: Complemental strand, 19986106 - 19985934
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||| |||||||||||| ||||||||||| |||||  ||||||||||||| |||||| ||||| |||||            ||||||||| |||    
T  19986106 gagatgaacctgtcaatagtgtgttaaataaaatttcaagacctatttgcgtgtgataatttttagattacccaaatttttctttttgtaaatgtgctaa 19986007  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacg 179  Q
    ||  |||||||||  | | ||||||||||||||||| |||||||  ||| |||||||||| ||||| ||||||    
T  19986006 tggacttttgggttgaatctaatgtgcaaaaattatcgatcgagctcggacgaccgcccgaggtcgtcatacg 19985934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 43069044 - 43068896
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| ||| |||||||||||||||||||||||| |||  ||||| | ||| | ||||||||||||||||||            |||||||||||||    
T  43069044 gagatgaatccggcaatagtgtgctaaataaaattccgagacttatttacatgtaagaattttcagattgcccaaatttttctttttgtaaatgtgttaa 43068945  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgg 155  Q
    ||  |||||||||   || ||||||| ||||||||||||||||| ||||    
T  43068944 tggacttttgggttgggtctaatgtgaaaaaattattgatcgagcccgg 43068896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 191
Target Start/End: Complemental strand, 14316694 - 14316641
Alignment:
Q  138 attattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgccc 191  Q
    ||||| ||||||| | ||||||||||||| | |||||||||| |||||||||||    
T  14316694 attatcgatcgagcctgggcgaccgcccgagatcgccatacggtagaaccgccc 14316641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 101; Significance: 4e-50; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 10 - 194
Target Start/End: Original strand, 34948761 - 34948945
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    |||||||||||||||||||||||||||||||| |||||| |||||| |||||||||||||||||||||||||            |||||||||||||||     
T  34948761 atgaacccgtcaatagtgtgctaaataaaatttcaagatctatttgtgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaatgg 34948860  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||||  ||| ||||||||||||||||| ||||||| | ||||||||||| |||||||||||||| ||||||||||||||    
T  34948861 gcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcctggggtcgccatacggtagaaccgcccatg 34948945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 13837985 - 13837801
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||            ||||||||||| |||     
T  13837985 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttgatgt 13837886  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||||  ||| |||||| |||||||||| ||||||  ||| |||| ||||||||||||||||||| ||||||||||||||    
T  13837885 gcttttgggttgagtctaatgtacaaaaattatcgatcgaacccgagcgatcgcccggggtcgccatacggtagaaccgcccatg 13837801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 398784 - 398597
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  398784 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 398685  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||| | ||| | ||||||||||||    
T  398684 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 398597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 18339273 - 18339106
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||||||||            |||| ||||||||    
T  18339273 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 18339174  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  |||||| | |   || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  18339173 ttggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 18339106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 28996897 - 28996730
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  28996897 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 28996798  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |   ||||| |||   || ||||| ||||||||||| |||||||  ||||||||||||||||||||||    
T  28996797 ttgacttttaggttgggtctaatgcgcaaaaattatcgatcgagctcgggcgaccgcccggggtcgcc 28996730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 7 - 168
Target Start/End: Complemental strand, 29743450 - 29743289
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| ||| || ||||||||||||||||||||| |||  ||||||||||| | ||||||||||||||||||            |||||||||||||    
T  29743450 gagatgaatccggcactagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgcccaaatttttctttctgtaaatgtgttaa 29743351  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggg 168  Q
    ||| ||||| |||   || ||||||||||||||||| ||| ||| |||||| ||||||||||    
T  29743350 tgaactttttggttgggtctaatgtgcaaaaattatcgattgagcccgggcaaccgcccggg 29743289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 31028451 - 31028531
Alignment:
Q  94 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |||||||||||||||||||||| |||    | ||||||||||||||||| ||||||| |||||| ||||| ||||||||||    
T  31028451 gtaaatgtgttaatgagcttttaggttggatctaatgtgcaaaaattatcgatcgagtccgggcaaccgctcggggtcgcc 31028531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 33229336 - 33229410
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||| ||| ||||||||||||||||||||| || |||  ||||| ||||| | ||||||||||||||||||    
T  33229336 gagatgaatccggcaatagtgtgctaaataaaatcccgagacttatttacgtgtaagaattttcagattgcccaa 33229410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 174
Target Start/End: Complemental strand, 13647053 - 13647017
Alignment:
Q  138 attattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    ||||| ||||||| |||||||||||||||||||||||    
T  13647053 attatcgatcgagcccgggcgaccgcccggggtcgcc 13647017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 97; Significance: 1e-47; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 29728386 - 29728570
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||||||||||||||||||||| ||||  ||||||||||| ||||||||||||||||||||            |||||||||||||    
T  29728386 gagatgaacccgtcaatagtgtgctaaataaaattcgaagacctatttgcgtgtcacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 29728485  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgccc 191  Q
    |||||||||||||  ||| |||||||||||| |||| |||||||  |||||||||| |||||||||||||||| |||||||||||    
T  29728486 tgagcttttgggttgagtctaatgtgcaaaatttatcgatcgagcacgggcgaccgtccggggtcgccatacggtagaaccgccc 29728570  T

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Target: chr8; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 10 - 190
Target Start/End: Complemental strand, 15838449 - 15838270
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||||||||||||||||||            |||||||||||||||     
T  15838449 atgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgaaaattttcagattgcccaa-atttttcttttgtaaatgtgttaatgg 15838351  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcc 190  Q
     ||||| |||  |||||||||||||||||||||  |||||| ||||| |||||||||||||||||||||| ||||||||||    
T  15838350 actttttggttgagtttaatgtgcaaaaattatcaatcgagcccgggtgaccgcccggggtcgccatacggtagaaccgcc 15838270  T

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Target: chr8; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 7 - 197
Target Start/End: Original strand, 3648794 - 3648984
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||||| |  || |||||||||||||||||||||||||||||            |||||||||||||    
T  3648794 gagatgaacccgtcaatagtgtgctaaataaaattccaaaacctacttgcgtgtgacaattttcagattgcccaaaattttctttttgtaaatgtgttaa 3648893  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggtt 197  Q
    || ||||||||||  ||| ||||||| ||||||||| ||||||| ||||||||| | || || |||||||||| ||||||||||| |||||    
T  3648894 tgggcttttgggttgagtctaatgtgaaaaaattatcgatcgagcccgggcgactgtcccggatcgccatacggtagaaccgcccctggtt 3648984  T

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Target: chr8; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 170
Target Start/End: Original strand, 16788025 - 16788188
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||||||||||||||||||||||||||  ||||||||||||| | |||| |||||||||||            |||| ||||||||    
T  16788025 gagatgaacccgtcaatagtgtgctaaataaaattccaagacctatttgcgtgtgagagttttaagattgcccaaatttttctttttgtaagtgtgttaa 16788124  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggt 170  Q
    |  ||||||||||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||    
T  16788125 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggt 16788188  T

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Target: chr8; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 39914681 - 39914495
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| | |||||||||||||| |||||||||             ||||||||||||    
T  39914681 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacttgtgacaattttcaaattgcccaaatttttttttta-taaatgtgttaa 39914583  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||| | ||| | |||||| |||||    
T  39914582 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgtccatg 39914495  T

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Target: chr8; HSP #6
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 7 - 175
Target Start/End: Original strand, 34136825 - 34136993
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||| ||||| ||||||||||||||||| | |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  34136825 gagatgaacccatcaattgtgtgctaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 34136924  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcca 175  Q
    |   |||||||||  ||| ||||||||||||||||| ||||||| |||||||||||| |||||||||||    
T  34136925 ttgacttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgctcggggtcgcca 34136993  T

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Target: chr8; HSP #7
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 4404175 - 4404008
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||| ||||| ||||||||||||||||||| |||  ||||||||||||| |||||| |||||||||||            |||| | ||||||    
T  4404175 gagatgaacccatcaattgtgtgctaaataaaattccgagacctatttgcgtgtgagaatttttagattgcccaaatttttctttttgtaagtatgttaa 4404076  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||  ||| ||||||||||||||||| ||||||| ||||||||||||| |||||||||    
T  4404075 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcctggggtcgcc 4404008  T

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Target: chr8; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 23402275 - 23402108
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||| |||||||||||| ||||||||||| | |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  23402275 gagatgaaccagtcaatagtgtgttaaataaaatttcgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 23402176  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||   || |||| |||||| ||||| ||||||| |||||||||||||||||||||||    
T  23402175 ttggcttttgggttgggtctaatatgcaaagattatcgatcgagcccgggcgaccgcccggggtcgcc 23402108  T

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Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 36408718 - 36408551
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| ||| |||||||||| ||||||||||||  |||  |||| |||||| | |||||||| |||||| ||            |||||||||||||    
T  36408718 gagatgaatccggcaatagtgtgttaaataaaattctgagacctattagcgtgtaagaattttcaaattgccaaaaattttctttttgtaaatgtgttaa 36408619  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    ||  |||||||||    | ||||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  36408618 tggacttttgggttggatctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgaggtcgcc 36408551  T

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Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 42231104 - 42231030
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||| |||||||||||||||||||||||||||  |||  ||||||| | ||| |||||||| |||||||||    
T  42231104 gagatgaatccgtcaatagtgtgctaaataaaattctgagacctatttgcatatgagaattttcaaattgcccaa 42231030  T

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Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 20 - 81
Target Start/End: Complemental strand, 9877374 - 9877313
Alignment:
Q  20 caatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||||||||||||||||| | |||  ||||||| ||||| ||||||||||||||||||    
T  9877374 caatagtgtgctaaataaaatttcgagacctatttgcatgtgagaattttcagattgcccaa 9877313  T

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Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 99 - 174
Target Start/End: Original strand, 2729288 - 2729363
Alignment:
Q  99 tgtgttaatgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |||||||||| |||||||| |    ||||||||| ||||||||| ||||||| ||||||| |||||||||||||||    
T  2729288 tgtgttaatgggcttttggattggatttaatgtgtaaaaattatcgatcgagcccgggcgtccgcccggggtcgcc 2729363  T

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Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 40470475 - 40470509
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaatt 41  Q
    |||||||||||||||||||||||||||||||||||    
T  40470475 gagatgaacccgtcaatagtgtgctaaataaaatt 40470509  T

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Target: chr1 (Bit Score: 93; Significance: 3e-45; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 10 - 194
Target Start/End: Complemental strand, 7433609 - 7433425
Alignment:
Q  10 atgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatga 109  Q
    |||||||||||||||||||||||||||||||| |||||  |||||| ||||||||||||| |||||||||||            |||||||||||||||     
T  7433609 atgaacccgtcaatagtgtgctaaataaaatttcaagacctatttgtgtgtgacaatttttagattgcccaaaattttctttttgtaaatgtgttaatgg 7433510  T
Q  110 gcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||||  ||| ||||||||||||||||| |||||||  |||||||||||||||||| |||||||| ||||||||||||||    
T  7433509 gcttttgggttgagtctaatgtgcaaaaattatagatcgagctcgggcgaccgcccggggttgccatacggtagaaccgcccatg 7433425  T

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Target: chr1; HSP #2
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 42310941 - 42311125
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||| || |||||||||||| |||||  ||||||||||||||||||||||||||||||||            |||||||||||||    
T  42310941 gagatgaacccgtcaatagcgtactaaataaaatttcaagacttatttgcgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 42311040  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgccc 191  Q
     | ||||||||||  ||| ||||||||||||||||| ||||||| |||||||| || | |||||||||||||| |||||||||||    
T  42311041 cgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgatcgtctggggtcgccatacggtagaaccgccc 42311125  T

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Target: chr1; HSP #3
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 26144422 - 26144235
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  26144422 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 26144323  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||| | ||| | ||||||||||||    
T  26144322 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 26144235  T

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Target: chr1; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 187
Target Start/End: Original strand, 32982056 - 32982236
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | |||||||| |||||||||||||||||||||  |||||| |||||||||||||||||||| ||||            |||||| ||||||    
T  32982056 gagatgaatctgtcaatagagtgctaaataaaattccaagacctatttgtgtgtgacaattttcagattgtccaaatttttctttttgtaaatatgttaa 32982155  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaacc 187  Q
    || |||||| |||   || ||||||||||||||||| ||||| | ||| |||||||||||||||||||||||| |||||||    
T  32982156 tgggcttttaggttgggtctaatgtgcaaaaattatcgatcgggcccgcgcgaccgcccggggtcgccatacggtagaacc 32982236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 170
Target Start/End: Complemental strand, 3829150 - 3828988
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||| ||| ||||||||||||||||||            |||| ||||||||    
T  3829150 gagatgaacccgtcaatagtgtgctaaataaaattcc-agacctatttgcgtatgaaaattttcagattgcccaaatttttctttttgtaagtgtgttaa 3829052  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggt 170  Q
    ||| |||||||||   |||||||||||||||||||| ||||||  ||| ||||||| |||||||    
T  3829051 tgaacttttgggttgggtttaatgtgcaaaaattatcgatcgaacccgagcgaccgtccggggt 3828988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 8 - 174
Target Start/End: Complemental strand, 17445479 - 17445313
Alignment:
Q  8 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaat 107  Q
    ||||||||||||||||| |||||||||||||||||| |||  ||||||||||||| ||||||||||||||||||            |||| |||||||||    
T  17445479 agatgaacccgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaat 17445380  T
Q  108 gagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
       |||||||||    | |||||| ||||||||||||||| || ||||||||||||  |||||||||    
T  17445379 tgacttttgggttggatctaatgtacaaaaattattgatccagcccgggcgaccgcatggggtcgcc 17445313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 35907719 - 35907552
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||| |||||||| |||||||||||||||||| |||  ||||||||||||| |||||||||||| |||||            |||| |||  |||    
T  35907719 gagatgaactcgtcaataatgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattacccaaaattttctttttgtaagtgtactaa 35907620  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||   || ||||||||||||||||| |||| || ||||||||||||||| |||||||    
T  35907619 ttggcttttgggttgggtctaatgtgcaaaaattatcgatcaagcccgggcgaccgcccgaggtcgcc 35907552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Original strand, 321377 - 321451
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||||||||||||| |||| ||||||||||||| |||  ||||||| | ||| ||||||||||||||||||    
T  321377 gagatgaacccgtcaataatgtgttaaataaaattccgagacctatttgcatatgagaattttcagattgcccaa 321451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 94 - 194
Target Start/End: Complemental strand, 23313319 - 23313218
Alignment:
Q  94 gtaaatgtgttaatgagcttttgggtcaagtttaatgtgcaa-aaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgccca 192  Q
    |||||||||||||||| |||||  ||  ||| |||||||||| |||| ||  |||||| |||||| |||||||| | |||||||||| ||||||||||||    
T  23313319 gtaaatgtgttaatgaacttttatgttgagtctaatgtgcaacaaatcatcaatcgagcccgggcaaccgcccgagatcgccatacggtagaaccgccca 23313220  T
Q  193 tg 194  Q
    ||    
T  23313219 tg 23313218  T

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Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 33489873 - 33489839
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaatt 41  Q
    |||||||||||||||||||||||||||||||||||    
T  33489873 gagatgaacccgtcaatagtgtgctaaataaaatt 33489839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Original strand, 41972256 - 41972290
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaatt 41  Q
    |||||||||||||||||||||||||||||||||||    
T  41972256 gagatgaacccgtcaatagtgtgctaaataaaatt 41972290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 126 - 173
Target Start/End: Original strand, 41972394 - 41972440
Alignment:
Q  126 taatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgc 173  Q
    ||||||||||||||||| ||||||| || |||||||||||||||||||    
T  41972394 taatgtgcaaaaattatcgatcgag-ccaggcgaccgcccggggtcgc 41972440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 92; Significance: 1e-44; HSPs: 19)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 7 - 190
Target Start/End: Original strand, 34084122 - 34084305
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||| |||||||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||            |||||||||||||    
T  34084122 gagatgaacccatcaatagtgtgctaaataaaattccaagacctatttgcgtgtgataattttcatattgcccaaatttttctttttgtaaatgtgttaa 34084221  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcc 190  Q
    ||  ||||| |||  | ||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||    
T  34084222 tggactttttggttgaatttaatgtgcaaaaattatcgatcgagtccgggcgaccgcccggggtcgccatacggtagaaccgcc 34084305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 22968444 - 22968631
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | |||||||||||||||||||||||| |||||  ||||| |||||||||||||| |||||||||||            |||||||||||||    
T  22968444 gagatgaaactgtcaatagtgtgctaaataaaatttcaagacctatttacgtgtgacaatttttagattgcccaaatttttctttttgtaaatgtgttaa 22968543  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || |||||||||| |||| ||||||||||||||||| ||||||| |||| ||||||||||||||||| | ||| ||||||||||||||    
T  22968544 tgggcttttgggttaagtctaatgtgcaaaaattatcgatcgagcccggacgaccgcccggggtcgctacacggtagaaccgcccatg 22968631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 8 - 194
Target Start/End: Original strand, 6269427 - 6269613
Alignment:
Q  8 agatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaat 107  Q
    ||||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            ||||||||||||||    
T  6269427 agatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaat 6269526  T
Q  108 gagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    | ||||||||||  ||| ||||||||||||||||| ||||||| |||| |||||||||||| |||| | ||| ||||||||||||||    
T  6269527 gggcttttgggttgagtctaatgtgcaaaaattatcgatcgagtccggacgaccgcccgggatcgctacacggtagaaccgcccatg 6269613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 19390313 - 19390126
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||||||||||||||||||||  ||||| ||||||||||||||||||||||||||            |||||||||||||    
T  19390313 gagatgaaactgtcaatagtgtgctaaataaaattccaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 19390214  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    |   ||||| |||  ||| ||||||||||||||||| ||||||  |||| ||||||||||||||||||| ||| ||||||| ||||||    
T  19390213 tagacttttaggttgagtctaatgtgcaaaaattatcgatcgaacccggacgaccgcccggggtcgccacacggtagaacctcccatg 19390126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 7 - 191
Target Start/End: Original strand, 40081741 - 40081922
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||||||| |||||||||            |||||||||||||    
T  40081741 gagatgaacccgtcaatagtgtgctaaaaaaaat-ccaagatctatttgcgtgtgacaattttcaaattgcccaaatttttctttttgtaaatgtgttaa 40081839  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgccc 191  Q
    ||||||||| |||  ||| |||||| |||||||||| ||||||| ||||||||||  || | ||||||||||| |||||||||||    
T  40081840 tgagctttt-ggttgagtctaatgttcaaaaattatcgatcgagcccgggcgacc-tccagagtcgccatacggtagaaccgccc 40081922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 194
Target Start/End: Complemental strand, 39771957 - 39771770
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||  |||||||||| |||||  ||||| ||||||||||||||||||||||||||             ||||||||||||    
T  39771957 gagatgaaactgtcaatagtgtgtcaaataaaatttcaagacctatttacgtgtgacaattttcagattgcccaaatttttctttttataaatgtgttaa 39771858  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    || ||||||||||  ||| ||||||||||||||||| || |||| |||||||||||||||||||||| | ||| | ||||||||||||    
T  39771857 tgggcttttgggttgagtctaatgtgcaaaaattatcgaccgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 39771770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 45183148 - 45182981
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  |||||| |||||| ||||||||||||||||||            |||| ||||||||    
T  45183148 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgtgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 45183049  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||   || ||||| ||||||||||| ||||||| |||||||||||||||||||||||    
T  45183048 ttggcttttgggttgggtctaatgcgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgcc 45182981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 7 - 196
Target Start/End: Original strand, 11018212 - 11018401
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||| ||||||||||||||||||  |||  ||||||||||||| ||||||||||||||||||            |||| ||||||||    
T  11018212 gagatgaacccgtcaattgtgtgctaaataaaattctgagacctatttgcgtgtgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 11018311  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggt 196  Q
    |  ||||||||||  ||| ||||||||||||||||| ||||||| | |||||||||||||| ||||||  ||| |  |||||||||||||    
T  11018312 ttggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcctgggcgaccgcccggagtcgccggacggtgaaaccgcccatggt 11018401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 7 - 175
Target Start/End: Complemental strand, 27935345 - 27935177
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||||||||||||| |||||||||||||||| |||  ||||| ||| ||| ||||||||||||||||||            |||| ||||||||    
T  27935345 gagatgaacccgtcaatagtatgctaaataaaattccgagacctattttcgtatgagaattttcagattgcccaaatttttctttttgtaagtgtgttaa 27935246  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcca 175  Q
    |||||||||||||   |||||||||||||||||||| ||||||| ||||||||| |||| |||| ||||    
T  27935245 tgagcttttgggttgggtttaatgtgcaaaaattatcgatcgagcccgggcgactgcccagggttgcca 27935177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 7 - 174
Target Start/End: Original strand, 6930894 - 6931061
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||| ||||||||||||||||||||||||||| |||  ||||||||||||| ||||||||||||||| ||            |||||||||||||    
T  6930894 gagatgaactcgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgagaattttcagattgcctaaatttttctttttgtaaatgtgttaa 6930993  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  ||||||||||    | ||||| ||||||||||| ||||||| ||||||||||| |||||||||||    
T  6930994 ttggcttttgggttggatctaatgcgcaaaaattatcgatcgagcccgggcgaccgtccggggtcgcc 6931061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 33041120 - 33040953
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||||||||| |||||||| ||||  |||            |||| ||||||||    
T  33041120 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcgtgtgaaaattttcaaattgttcaaatttttctttttgtaagtgtgttaa 33041021  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    | |||||||||||   || |||| ||||||||||||  |||||| ||| |||||||||||||||||||    
T  33041020 ttagcttttgggttgggtctaatatgcaaaaattatcaatcgagcccgagcgaccgcccggggtcgcc 33040953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 45336041 - 45335875
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| ||| || |||||||||||||||||||||||||  ||||||||||| | |||||||||||||||||             |||||||||||||    
T  45336041 gagatgaatccggcactagtgtgctaaataaaattccaagacctatttgcgtgtaagaattttcagattgcccagatttttctttttgtaaatgtgttaa 45335942  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    ||| ||||| |||   || ||||||| ||||||||| ||| ||| ||||||||||||||| |||||||    
T  45335941 tga-ctttttggttgggtctaatgtgtaaaaattatcgattgagtccgggcgaccgcccgaggtcgcc 45335875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 6503569 - 6503756
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||| ||||| ||||||||||||||| ||| |||  ||||||| ||||| ||||||||||||||  ||            |||| |||| |||    
T  6503569 gagatgaacccatcaattgtgtgctaaataaaaatccgagacctatttgcctgtgagaattttcagattgcttaaatttttctttttgtaagtgtgctaa 6503668  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    |  ||||||||||  ||| |||| ||||||||| || ||||||| |||||||||||||||||||||||  ||| |  |||||||||||    
T  6503669 ttggcttttgggttgagtctaatttgcaaaaataatcgatcgagcccgggcgaccgcccggggtcgccggacggtgaaaccgcccatg 6503756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 7 - 81
Target Start/End: Complemental strand, 35514429 - 35514355
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaa 81  Q
    |||||||||||||||||||||||| |||||||||||| |||  |||||||| |||| |||||||| |||| ||||    
T  35514429 gagatgaacccgtcaatagtgtgcaaaataaaattcctagacctatttgcgagtgagaattttcatattgtccaa 35514355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 122 - 190
Target Start/End: Complemental strand, 22922209 - 22922141
Alignment:
Q  122 agtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcc 190  Q
    |||||||||||||||||| || ||||||| ||| ||||||||||||| |||||||||| | ||||||||    
T  22922209 agtttaatgtgcaaaaatgatcgatcgagcccgagcgaccgcccgggatcgccatacggtggaaccgcc 22922141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 22922262 - 22922214
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttg 55  Q
    ||||||||||||||||||||||| |||||||||||||||||| ||||||    
T  22922262 gagatgaacccgtcaatagtgtgttaaataaaattccaagatctatttg 22922214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 23 - 174
Target Start/End: Original strand, 19565517 - 19565668
Alignment:
Q  23 tagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaatgagcttttgggtcaa 122  Q
    ||||||||||||||||||||| |||  ||||||||||| | ||||||||||||| ||||            |||||||||||||||   |||| |||       
T  19565517 tagtgtgctaaataaaattccgagacctatttgcgtgtaagaattttcagattgtccaaatttttctttttgtaaatgtgttaatggattttttggttgg 19565616  T
Q  123 gtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    || ||||||||||||||||| ||| ||  ||||||||||||||||| |||||    
T  19565617 gtctaatgtgcaaaaattatcgattgaacccgggcgaccgcccgggatcgcc 19565668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 7 - 41
Target Start/End: Complemental strand, 5135455 - 5135421
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaatt 41  Q
    |||||||||||||||||||||||||||||||||||    
T  5135455 gagatgaacccgtcaatagtgtgctaaataaaatt 5135421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 126 - 174
Target Start/End: Complemental strand, 5354757 - 5354709
Alignment:
Q  126 taatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |||||||  |||||||  ||||||| |||||||||||||||||||||||    
T  5354757 taatgtgagaaaattaaggatcgagcccgggcgaccgcccggggtcgcc 5354709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 7 - 196
Target Start/End: Complemental strand, 18009 - 17820
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | |||||||||||||||||||||||| |||||  ||||| | ||||||||||||||||||||||||            |||||||||||||    
T  18009 gagatgaaactgtcaatagtgtgctaaataaaatttcaagacctatttacatgtgacaattttcagattgcccaaatttttctttttgtaaatgtgttaa 17910  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggt 196  Q
    || ||||||||||  ||| ||||||||||||||||| ||||||| |||| ||| ||| ||||||||||| ||| ||||||||||||||||    
T  17909 tgggcttttgggttgagtctaatgtgcaaaaattatcgatcgagcccggacgatcgctcggggtcgccacacggtagaaccgcccatggt 17820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 7 - 194
Target Start/End: Original strand, 480457 - 480644
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  480457 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 480556  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatg 194  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| |||||||||||||||||||||| | ||| | ||||||||||||    
T  480557 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccggggtcgctacacggtggaaccgcccatg 480644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2142 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 7 - 197
Target Start/End: Complemental strand, 689 - 499
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||| | ||||||||||||| ||||||||||||||||  ||||| |||||||||||||||| |||||||||             ||||||||||||    
T  689 gagatgaaactgtcaatagtgtgccaaataaaattccaagacctatttacgtgtgacaattttcaaattgcccaaatttttctttttataaatgtgttaa 590  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgccatacgctagaaccgcccatggtt 197  Q
    ||||||||| |||  ||| ||||||||||||||||| ||||||| ||||||||||||||||| |||| | ||| | |||||||||||||||    
T  589 tgagctttttggttgagtctaatgtgcaaaaattatcgatcgagcccgggcgaccgcccgggatcgctacacggtggaaccgcccatggtt 499  T

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Target: scaffold0502 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 5397 - 5230
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||||||||            |||| ||||||||    
T  5397 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgcccaaaattttctttttgtaagtgtgttaa 5298  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    |  |||||| | |   || ||||||||||||||||||||||||| |||||||||||||||||||||||    
T  5297 ttggcttttagattgggtctaatgtgcaaaaattattgatcgagcccgggcgaccgcccggggtcgcc 5230  T

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Target: scaffold0041 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 7 - 155
Target Start/End: Complemental strand, 53092 - 52944
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||||||| ||||| ||||||||||||| ||||            |||||||||||||    
T  53092 gagatgaacccgtcaatagtgtgctaaataaaattccgagacctatttgcatgtgagaattttcagattgtccaaatttttctttttgtaaatgtgttaa 52993  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgg 155  Q
    |  |||||||||| || | ||||||||||||||||| ||||||| ||||    
T  52992 ttggcttttgggttaaatctaatgtgcaaaaattatcgatcgagcccgg 52944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 52; Significance: 8e-21; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 7 - 174
Target Start/End: Complemental strand, 31647 - 31480
Alignment:
Q  7 gagatgaacccgtcaatagtgtgctaaataaaattccaagatatatttgcgtgtgacaattttcagattgcccaannnnnnnnnnnngtaaatgtgttaa 106  Q
    |||||||||| ||||||||||||| |||||||||| | |||  |||||||| |||| ||||||||||||| ||||            |||| ||||||||    
T  31647 gagatgaacctgtcaatagtgtgcaaaataaaattactagacctatttgcgagtgagaattttcagattgtccaaatttttctttttgtaagtgtgttaa 31548  T
Q  107 tgagcttttgggtcaagtttaatgtgcaaaaattattgatcgagaccgggcgaccgcccggggtcgcc 174  Q
    || ||||||||||   || || |||||||||||||| ||||||| ||||||||||| | |||||||||    
T  31547 tgggcttttgggttgggtctagtgtgcaaaaattatcgatcgagcccgggcgaccgtctggggtcgcc 31480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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