View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7726_low_3 (Length: 657)

Name: NF7726_low_3
Description: NF7726
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7726_low_3
NF7726_low_3
[»] chr5 (24 HSPs)
chr5 (17-657)||(5848192-5848818)
chr5 (387-451)||(20318883-20318947)
chr5 (402-448)||(34272933-34272979)
chr5 (387-448)||(1287914-1287975)
chr5 (387-448)||(10639193-10639254)
chr5 (387-444)||(16454607-16454664)
chr5 (387-448)||(24178406-24178467)
chr5 (387-464)||(12492695-12492773)
chr5 (387-448)||(2075799-2075860)
chr5 (387-448)||(16347703-16347764)
chr5 (226-284)||(3096912-3096971)
chr5 (411-445)||(14749000-14749034)
chr5 (397-466)||(21952257-21952327)
chr5 (387-448)||(1275161-1275222)
chr5 (387-448)||(21093672-21093733)
chr5 (411-448)||(27998343-27998380)
chr5 (411-448)||(28186993-28187030)
chr5 (408-447)||(11002747-11002786)
chr5 (386-448)||(5305511-5305573)
chr5 (528-602)||(14667827-14667901)
chr5 (387-444)||(28977186-28977243)
chr5 (462-514)||(31636181-31636234)
chr5 (395-444)||(36123527-36123576)
chr5 (415-448)||(43558139-43558172)
[»] chr3 (26 HSPs)
chr3 (387-448)||(33272353-33272414)
chr3 (397-448)||(42510336-42510387)
chr3 (387-448)||(25191275-25191336)
chr3 (387-448)||(51448034-51448095)
chr3 (402-448)||(52138711-52138757)
chr3 (387-448)||(28245333-28245394)
chr3 (403-448)||(47542037-47542082)
chr3 (392-448)||(2341039-2341095)
chr3 (387-447)||(45728042-45728102)
chr3 (397-448)||(50621685-50621736)
chr3 (402-448)||(46568027-46568073)
chr3 (402-448)||(54278931-54278977)
chr3 (387-428)||(5168724-5168765)
chr3 (397-446)||(11581350-11581399)
chr3 (402-447)||(26490228-26490273)
chr3 (387-448)||(46367708-46367771)
chr3 (413-448)||(46431996-46432031)
chr3 (397-448)||(49841517-49841568)
chr3 (402-448)||(38850005-38850051)
chr3 (416-464)||(19676398-19676447)
chr3 (402-447)||(43695091-43695136)
chr3 (387-448)||(45236752-45236813)
chr3 (387-444)||(53519482-53519539)
chr3 (387-443)||(29374838-29374894)
chr3 (559-603)||(44395512-44395556)
chr3 (559-619)||(54365110-54365170)
[»] chr6 (18 HSPs)
chr6 (387-466)||(31818434-31818514)
chr6 (387-448)||(9706672-9706733)
chr6 (387-448)||(28085272-28085333)
chr6 (400-448)||(4948632-4948680)
chr6 (400-448)||(4955603-4955651)
chr6 (387-442)||(14030702-14030757)
chr6 (397-448)||(33998329-33998380)
chr6 (387-448)||(608055-608116)
chr6 (392-448)||(5631719-5631775)
chr6 (392-448)||(10100182-10100238)
chr6 (387-443)||(20427966-20428022)
chr6 (405-448)||(32755833-32755876)
chr6 (397-448)||(33083964-33084015)
chr6 (407-464)||(9594020-9594078)
chr6 (387-444)||(2079229-2079286)
chr6 (387-448)||(5258475-5258536)
chr6 (408-444)||(6293698-6293734)
chr6 (387-466)||(30031152-30031232)
[»] chr7 (30 HSPs)
chr7 (397-448)||(36514530-36514581)
chr7 (387-464)||(11593856-11593934)
chr7 (402-466)||(1740708-1740773)
chr7 (387-448)||(31005119-31005180)
chr7 (387-448)||(33072850-33072911)
chr7 (387-448)||(33350131-33350192)
chr7 (387-448)||(35906526-35906587)
chr7 (399-466)||(28542190-28542257)
chr7 (402-448)||(5335833-5335879)
chr7 (397-466)||(30200265-30200335)
chr7 (407-448)||(14593677-14593718)
chr7 (407-448)||(16013200-16013241)
chr7 (387-448)||(34869316-34869377)
chr7 (387-448)||(36651890-36651951)
chr7 (402-451)||(36869611-36869660)
chr7 (403-448)||(37617856-37617901)
chr7 (387-448)||(49029172-49029233)
chr7 (389-448)||(39811855-39811914)
chr7 (554-603)||(6420641-6420690)
chr7 (387-444)||(12841604-12841661)
chr7 (387-444)||(25579400-25579457)
chr7 (387-448)||(32630491-32630552)
chr7 (387-448)||(47848570-47848631)
chr7 (389-448)||(27022031-27022090)
chr7 (393-448)||(43281578-43281633)
chr7 (407-448)||(13859333-13859374)
chr7 (407-448)||(24550012-24550053)
chr7 (387-448)||(38606901-38606962)
chr7 (410-466)||(40139222-40139279)
chr7 (402-446)||(35559321-35559365)
[»] chr2 (24 HSPs)
chr2 (386-448)||(7825253-7825315)
chr2 (397-466)||(9647911-9647981)
chr2 (387-448)||(36183347-36183408)
chr2 (387-466)||(16097296-16097376)
chr2 (387-448)||(2610424-2610485)
chr2 (387-448)||(3865968-3866029)
chr2 (387-448)||(8180676-8180737)
chr2 (387-448)||(38429780-38429841)
chr2 (387-448)||(41763366-41763427)
chr2 (392-448)||(45077649-45077705)
chr2 (387-446)||(4807488-4807547)
chr2 (392-443)||(28908232-28908283)
chr2 (408-466)||(42092436-42092495)
chr2 (387-448)||(451947-452008)
chr2 (387-448)||(3243976-3244037)
chr2 (387-444)||(11992435-11992492)
chr2 (387-448)||(19337174-19337235)
chr2 (387-448)||(41197553-41197614)
chr2 (397-440)||(1456139-1456182)
chr2 (405-448)||(38453014-38453057)
chr2 (406-444)||(38434866-38434904)
chr2 (407-448)||(4598889-4598930)
chr2 (414-451)||(19527860-19527897)
chr2 (225-284)||(2610263-2610323)
[»] chr4 (36 HSPs)
chr4 (387-448)||(12494646-12494707)
chr4 (387-448)||(31960139-31960200)
chr4 (387-448)||(48622866-48622927)
chr4 (387-448)||(56375186-56375247)
chr4 (387-447)||(40933222-40933282)
chr4 (387-446)||(29398715-29398773)
chr4 (397-466)||(17900386-17900456)
chr4 (397-466)||(44860760-44860830)
chr4 (387-448)||(436125-436186)
chr4 (387-448)||(23906626-23906687)
chr4 (387-448)||(27450498-27450559)
chr4 (387-448)||(43433814-43433875)
chr4 (387-448)||(50286867-50286928)
chr4 (387-448)||(53707690-53707751)
chr4 (392-444)||(11389621-11389673)
chr4 (412-448)||(54470128-54470164)
chr4 (387-446)||(33191175-33191234)
chr4 (402-448)||(33227120-33227166)
chr4 (387-448)||(934760-934821)
chr4 (387-448)||(4440751-4440812)
chr4 (397-446)||(27991742-27991791)
chr4 (387-448)||(35690200-35690261)
chr4 (225-262)||(43562433-43562470)
chr4 (387-448)||(46583149-46583210)
chr4 (415-466)||(2588905-2588957)
chr4 (227-267)||(3273159-3273199)
chr4 (408-448)||(33709836-33709876)
chr4 (397-448)||(31458934-31458985)
chr4 (402-448)||(1777340-1777386)
chr4 (402-467)||(7092524-7092590)
chr4 (402-448)||(48174418-48174464)
chr4 (387-448)||(27983096-27983157)
chr4 (387-448)||(49739119-49739180)
chr4 (387-448)||(52569840-52569901)
chr4 (554-619)||(54934982-54935047)
chr4 (402-446)||(43070091-43070135)
[»] chr1 (24 HSPs)
chr1 (387-448)||(1210641-1210702)
chr1 (387-448)||(9592630-9592691)
chr1 (387-448)||(30202455-30202516)
chr1 (387-448)||(43240706-43240767)
chr1 (397-448)||(26016343-26016394)
chr1 (387-448)||(696165-696226)
chr1 (387-448)||(8671816-8671877)
chr1 (387-448)||(49347718-49347779)
chr1 (387-448)||(51441090-51441151)
chr1 (387-448)||(8391668-8391729)
chr1 (387-448)||(15085830-15085891)
chr1 (387-448)||(22089990-22090051)
chr1 (387-448)||(32083070-32083131)
chr1 (403-448)||(34792674-34792719)
chr1 (387-428)||(38877678-38877719)
chr1 (402-464)||(9599702-9599765)
chr1 (397-448)||(52442829-52442880)
chr1 (557-603)||(50846650-50846696)
chr1 (399-448)||(34827427-34827476)
chr1 (403-448)||(37463196-37463241)
chr1 (387-448)||(51601954-51602015)
chr1 (408-448)||(4379922-4379962)
chr1 (559-619)||(6025692-6025752)
chr1 (404-448)||(6641045-6641089)
[»] chr8 (22 HSPs)
chr8 (404-447)||(30456537-30456580)
chr8 (402-448)||(39946768-39946814)
chr8 (387-448)||(36545043-36545104)
chr8 (389-448)||(40813220-40813279)
chr8 (398-448)||(2518716-2518765)
chr8 (402-448)||(12492167-12492213)
chr8 (406-448)||(36395275-36395317)
chr8 (402-448)||(36565566-36565612)
chr8 (414-466)||(29520583-29520636)
chr8 (397-446)||(42493631-42493680)
chr8 (411-466)||(13171955-13172011)
chr8 (403-443)||(39760754-39760794)
chr8 (407-446)||(39953591-39953630)
chr8 (410-444)||(78952-78986)
chr8 (402-448)||(2796466-2796512)
chr8 (387-441)||(33666829-33666883)
chr8 (397-466)||(36069549-36069619)
chr8 (414-448)||(44681401-44681435)
chr8 (387-448)||(15215596-15215657)
chr8 (397-446)||(41972101-41972150)
chr8 (407-448)||(43732483-43732524)
chr8 (559-619)||(35362785-35362845)
[»] scaffold0570 (1 HSPs)
scaffold0570 (402-448)||(2595-2641)
[»] scaffold0018 (2 HSPs)
scaffold0018 (387-464)||(31364-31442)
scaffold0018 (387-448)||(44196-44257)
[»] scaffold0157 (1 HSPs)
scaffold0157 (387-448)||(25770-25831)
[»] scaffold0113 (1 HSPs)
scaffold0113 (387-448)||(11923-11984)
[»] scaffold0024 (1 HSPs)
scaffold0024 (387-448)||(82617-82678)


Alignment Details
Target: chr5 (Bit Score: 586; Significance: 0; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 586; E-Value: 0
Query Start/End: Original strand, 17 - 657
Target Start/End: Complemental strand, 5848818 - 5848192
Alignment:
Q  17 catttcttacttgctagtattattttaagagtttaatcgttgtacaatgacagtgtaatgttactttacaaattaagtgttgcctcgtcaattaatgaat 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5848818 catttcttacttgctagtattattttaagagtttaatcgttgtacaatgacagtgtaatgttactttacaaattaagtgttgcctcgtcaattaatgaat 5848719  T
Q  117 attatttgtcaactgtgttttcattttcgttaattgaaagttagagatcatgtcaaaacacaagttacatggtttaatatcttgaatacaaattgatgta 216  Q
    |||||||              |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5848718 attattt--------------cattttcgttaattgaaagttagagatcatgtcaaaacacaagttacatggtttaatatcttgaatacaaattgatgta 5848633  T
Q  217 gagattagagatataaaccatcaaatttaagttggatggttgaaatggagaaggccttaggtgttttacatggtatagaagtatcgtattttacgtggta 316  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5848632 gagattagagatataaaccatcaaatttaagttggatggttgaaatggagaaggccttaggtgttttacatggtatagaagtatcgtattttacgtggta 5848533  T
Q  317 taaaagtatcgcttaagctgatacaattgtaagatcaacaatgttatctgggatgaagttttggactgtgaacatgagagtaaaataagtgtagcagaga 416  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5848532 taaaagtatcgcttaagctgatacaattgtaagatcaacaatgttatctgggatgaagttttggactgtgaacatgagagtaaaataagtgtagcagaga 5848433  T
Q  417 tgaggatgttgcattggatgtgtggtaagactggagggataagattagaattagaaatgacagcatttgagaaagttgggtagcatttatagtagaaact 516  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  5848432 tgaggatgttgcattggatgtgtggtaagactggagggataagattagaattagaaatgacagcatttgagaaatttgggtagcatttatagtagaaact 5848333  T
Q  517 caacttaggtgtgtagatagaagacatgcatattatttagttaggagagtagatcaaatgaatgataatcaaatcactagaggcagatgatgacgtagaa 616  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5848332 caacttaggtgtgtagatagaagacatgcatattatttagtttggagagtagatcaaatgaatgataatcaaatcactagaggcagatgatgacgtagaa 5848233  T
Q  617 aaatcataagaatcaaataacagaatccaacctaagaagca 657  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5848232 aaatcataagaatcaaataacagaatccaacctaagaagca 5848192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 451
Target Start/End: Original strand, 20318883 - 20318947
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga 451  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  20318883 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactgga 20318947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 34272933 - 34272979
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  34272933 taagtgtagcagagatgaggatgttgcattggatgagtggtaagact 34272979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 1287975 - 1287914
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  1287975 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 1287914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 10639193 - 10639254
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  10639193 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 10639254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 16454607 - 16454664
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    |||| ||||||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  16454607 aacacgagagtaaagtaagtgtagcagagatgaggatgatgcattggatgtttggtaa 16454664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 24178406 - 24178467
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  24178406 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 24178467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 464
Target Start/End: Complemental strand, 12492773 - 12492695
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattag 464  Q
    ||||||||| | || ||||||||||||||||||||||||| | ||||||| ||||||||||| ||  ||||||||||||    
T  12492773 aacatgagaatcaagtaagtgtagcagagatgaggatgttacgttggatgagtggtaagactagacaggataagattag 12492695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 2075860 - 2075799
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| || ||||||||    
T  2075860 aacatgagaattaagtaagtgtagcagagatgaggatgttgcgttggatgagttgtaagact 2075799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 16347764 - 16347703
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||||| || |||||||||| |||||||||||||||| ||||||| |||||||||||    
T  16347764 aacacgagagttaagtaagtgtagcggagatgaggatgttgcgttggatgagtggtaagact 16347703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 226 - 284
Target Start/End: Original strand, 3096912 - 3096971
Alignment:
Q  226 gatataaaccatcaaatttaagttggatggttgaaatgga-gaaggccttaggtgtttta 284  Q
    |||||||||||||||||| ||||||| ||||||||||||| ||  |||||||||||||||    
T  3096912 gatataaaccatcaaattcaagttgggtggttgaaatggatgagagccttaggtgtttta 3096971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 411 - 445
Target Start/End: Original strand, 14749000 - 14749034
Alignment:
Q  411 cagagatgaggatgttgcattggatgtgtggtaag 445  Q
    |||||||||||||||||||||||||||||||||||    
T  14749000 cagagatgaggatgttgcattggatgtgtggtaag 14749034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 21952257 - 21952327
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    |||| ||||||||| | ||||||||||||||| ||| ||||||||||||||| || | |||||||||||||    
T  21952257 taaattaagtgtagaaaagatgaggatgttgcgttgcatgtgtggtaagactagacgagataagattagaa 21952327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 1275161 - 1275222
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||  ||||||||||||||||||||| ||||||| |||||||||||    
T  1275161 aacatgagaatcaagtaagcatagcagagatgaggatgttgcgttggatgagtggtaagact 1275222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 21093672 - 21093733
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| ||||||||||||||  || ||||||||||||| ||| |||||||||||||||    
T  21093672 aacacgagaataaaataagtgtagtggatatgaggatgttgcgttgtatgtgtggtaagact 21093733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 448
Target Start/End: Original strand, 27998343 - 27998380
Alignment:
Q  411 cagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||| |||||||||||||||||||    
T  27998343 cagagatgaggatgttgcgttggatgtgtggtaagact 27998380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 411 - 448
Target Start/End: Complemental strand, 28187030 - 28186993
Alignment:
Q  411 cagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||| |||||||||||||||||||||||||||    
T  28187030 cagagatgagaatgttgcattggatgtgtggtaagact 28186993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 408 - 447
Target Start/End: Complemental strand, 11002786 - 11002747
Alignment:
Q  408 tagcagagatgaggatgttgcattggatgtgtggtaagac 447  Q
    |||||||||||||||||||||  |||||||||||||||||    
T  11002786 tagcagagatgaggatgttgcgctggatgtgtggtaagac 11002747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 5305511 - 5305573
Alignment:
Q  386 gaacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||| |||| |||||||||  ||||| ||| | ||||||||| |||||||||||||||||||    
T  5305511 gaacacgagaataaaataagaatagcaaagacggggatgttgcgttggatgtgtggtaagact 5305573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 528 - 602
Target Start/End: Original strand, 14667827 - 14667901
Alignment:
Q  528 tgtagatagaagacatgcatattatttagttaggagagtagatcaaatgaatgataatcaaatcactagaggcag 602  Q
    |||||| |||||||||| | ||||| |||| |||||||||||||| ||| || ||| | | ||||||||||||||    
T  14667827 tgtagagagaagacatgtacattatgtagtaaggagagtagatcagatggattatagttatatcactagaggcag 14667901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 28977243 - 28977186
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    ||||||||| | || ||||||||||||||||||| ||||||  ||||||| |||||||    
T  28977243 aacatgagaatcaagtaagtgtagcagagatgagtatgttgtgttggatgagtggtaa 28977186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 462 - 514
Target Start/End: Complemental strand, 31636234 - 31636181
Alignment:
Q  462 tagaattagaaatgacagcatttgagaaagtt-gggtagcatttatagtagaaa 514  Q
    |||||||| ||||||||||||| ||||||||| ||||||||  |||||||||||    
T  31636234 tagaattataaatgacagcattagagaaagttggggtagcacctatagtagaaa 31636181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 444
Target Start/End: Complemental strand, 36123576 - 36123527
Alignment:
Q  395 agtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    ||||||||||| ||||||||||||| |||||||  |||||||||| ||||    
T  36123576 agtaaaataagcgtagcagagatgaagatgttgtgttggatgtgttgtaa 36123527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 415 - 448
Target Start/End: Complemental strand, 43558172 - 43558139
Alignment:
Q  415 gatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||| |||||||||||||||||||    
T  43558172 gatgaggatgttgcgttggatgtgtggtaagact 43558139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 46; Significance: 7e-17; HSPs: 26)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 33272414 - 33272353
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||||||||||| |||||||||||    
T  33272414 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcattggatgagtggtaagact 33272353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 42510387 - 42510336
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  42510387 taaaataagcatagcagagatgaggatgttgcattggatgtgtggtaagact 42510336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 25191275 - 25191336
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||||||||||||||||||||  |||||| |||||||||||    
T  25191275 aacacgagagtaaagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagact 25191336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 51448095 - 51448034
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  51448095 aacatgagaatcaactaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 51448034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 52138711 - 52138757
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  52138711 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 52138757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 28245333 - 28245394
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  28245333 aacatgagaattaagtaagtgtagcaaagatgaggatgttgcgttggatgagtggtaagact 28245394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 47542082 - 47542037
Alignment:
Q  403 aagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||    
T  47542082 aagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 47542037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 2341095 - 2341039
Alignment:
Q  392 gagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||||||||  |||  ||||||||||||||||||||||||||||||||||||    
T  2341095 gagaataaaataaggatagtggagatgaggatgttgcattggatgtgtggtaagact 2341039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 447
Target Start/End: Original strand, 45728042 - 45728102
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagac 447  Q
    ||||||||| | || |||||||||||||||||||||||||||  |||||| ||||||||||    
T  45728042 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaagac 45728102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 50621736 - 50621685
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||| |||||||| |||||||||| ||| ||||||||||||    
T  50621736 taaaataagtgtagcggagatgagaatgttgcatttgatatgtggtaagact 50621685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 46568027 - 46568073
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||||||  ||||||||||| |||||||    
T  46568027 taagtgtagcagagatgaggatgttgtgttggatgtgtgttaagact 46568073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 54278931 - 54278977
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||||||| ||||||  |||||||||||    
T  54278931 taagtgtagcagagatgaggatgttgcgttggataagtggtaagact 54278977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 428
Target Start/End: Original strand, 5168724 - 5168765
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgc 428  Q
    |||||||||||||| |||||||||| ||||||||||||||||    
T  5168724 aacatgagagtaaagtaagtgtagcggagatgaggatgttgc 5168765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 446
Target Start/End: Original strand, 11581350 - 11581399
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    |||| ||||||| | |||||||||||||||||||||||||||| ||||||    
T  11581350 taaattaagtgtggaagagatgaggatgttgcattggatgtgtagtaaga 11581399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 402 - 447
Target Start/End: Original strand, 26490228 - 26490273
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagac 447  Q
    |||||||||| |||||||||||||||| ||||||| ||||||||||    
T  26490228 taagtgtagcggagatgaggatgttgcgttggatgagtggtaagac 26490273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 46367771 - 46367708
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattgg--atgtgtggtaagact 448  Q
    |||| |||| |||||||||||||| ||||||||||||||||  ||||  |||||||||||||||    
T  46367771 aacacgagaataaaataagtgtagtagagatgaggatgttgtgttggatatgtgtggtaagact 46367708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 413 - 448
Target Start/End: Complemental strand, 46432031 - 46431996
Alignment:
Q  413 gagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||| |||||||||||||||||||||||||||||    
T  46432031 gagatggggatgttgcattggatgtgtggtaagact 46431996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 49841517 - 49841568
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||||| ||||||||||||||  |||||||||| ||||||||    
T  49841517 taaattaagtgtagcatagatgaggatgttgtgttggatgtgtagtaagact 49841568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 38850005 - 38850051
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||||||||  |||||| || ||||||||    
T  38850005 taagtgtagcagagatgaggatgttgcgctggatgagtagtaagact 38850051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 416 - 464
Target Start/End: Complemental strand, 19676447 - 19676398
Alignment:
Q  416 atgaggatgttgcattggatgtgtggtaagactgga-gggataagattag 464  Q
    ||||||||||||||||||||| | ||||||||| || |||||||||||||    
T  19676447 atgaggatgttgcattggatgagcggtaagactagatgggataagattag 19676398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 447
Target Start/End: Complemental strand, 43695136 - 43695091
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagac 447  Q
    |||||||| |||||||||||||||||| |||||||  |||||||||    
T  43695136 taagtgtaacagagatgaggatgttgcgttggatgaatggtaagac 43695091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 45236752 - 45236813
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| |||| ||||  |||| ||||| |||||||||| |||||||||||||||||||    
T  45236752 aacacgagaataaagtaagcctagccgagattaggatgttgcgttggatgtgtggtaagact 45236813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 53519482 - 53519539
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    |||| ||||||||| | |||||||| || ||||||||||||| ||||||| |||||||    
T  53519482 aacacgagagtaaagttagtgtagcggaaatgaggatgttgcgttggatgagtggtaa 53519539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 443
Target Start/End: Original strand, 29374838 - 29374894
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggta 443  Q
    |||||||||||||||||||  ||||| |||| |||||||||  || |||||||||||    
T  29374838 aacatgagagtaaaataagcatagcaaagattaggatgttgtgttagatgtgtggta 29374894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 603
Target Start/End: Original strand, 44395512 - 44395556
Alignment:
Q  559 aggagagtagatcaaatgaatgataatcaaatcactagaggcaga 603  Q
    |||||||||||||||||| | | || |||||||||||||||||||    
T  44395512 aggagagtagatcaaatggagggtagtcaaatcactagaggcaga 44395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 619
Target Start/End: Complemental strand, 54365170 - 54365110
Alignment:
Q  559 aggagagtagatcaaatgaatgataatcaaatcactagaggcagatgatgacgtagaaaaa 619  Q
    |||||||||||||||||||| |||| ||| | ||| ||||||||| || ||| ||||||||    
T  54365170 aggagagtagatcaaatgaaggatagtcagaccacgagaggcagaggaagacctagaaaaa 54365110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 3e-16; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 31818434 - 31818514
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||| |||| ||||| | || | |||||||||||||    
T  31818434 aacatgagaataaaataagtgtagcagagatgagaatgttgcattggatatgtgttaagattagatgagataagattagaa 31818514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 9706672 - 9706733
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||| ||||||||||||||||| |||||| |||||||||||    
T  9706672 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcactggatgagtggtaagact 9706733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 28085272 - 28085333
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  28085272 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 28085333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 4948680 - 4948632
Alignment:
Q  400 aataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  4948680 aataagtgtagcggagattaggatgttgctttggatgtgtggtaagact 4948632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 400 - 448
Target Start/End: Complemental strand, 4955651 - 4955603
Alignment:
Q  400 aataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  4955651 aataagtgtagcggagattaggatgttgctttggatgtgtggtaagact 4955603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 387 - 442
Target Start/End: Original strand, 14030702 - 14030757
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggt 442  Q
    |||| ||||||||| |||||||||||||||||||||||||||  |||||| |||||    
T  14030702 aacacgagagtaaagtaagtgtagcagagatgaggatgttgcgatggatgagtggt 14030757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 33998380 - 33998329
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| ||||||||||||| |||||||| |||||||||||||||||||    
T  33998380 taaattaagcgtagcagagatgaagatgttgcgttggatgtgtggtaagact 33998329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 608055 - 608116
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| |||| |||||||||| |||||||||||||| | ||||||| |||||||||||    
T  608055 aacacgagaataaagtaagtgtagcggagatgaggatgttccgttggatgagtggtaagact 608116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 5631719 - 5631775
Alignment:
Q  392 gagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| ||||||||||  ||||||||||||||  ||||||| |||||||||||    
T  5631719 gagagtaaagtaagtgtagcgaagatgaggatgttgtgttggatgagtggtaagact 5631775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 392 - 448
Target Start/End: Complemental strand, 10100238 - 10100182
Alignment:
Q  392 gagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||| || |||||||||| |||||||||||||||| || |||| |||||||||||    
T  10100238 gagagtcaagtaagtgtagcggagatgaggatgttgcgttagatgagtggtaagact 10100182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 387 - 443
Target Start/End: Complemental strand, 20428022 - 20427966
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggta 443  Q
    |||| |||||| ||||||||||||| ||||||||||||||||  |||||| ||||||    
T  20428022 aacacgagagtcaaataagtgtagcggagatgaggatgttgcgctggatgagtggta 20427966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Original strand, 32755833 - 32755876
Alignment:
Q  405 gtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||||  ||||||| |||||||||||    
T  32755833 gtgtagcagagatgaggatgttgtgttggatgagtggtaagact 32755876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 33083964 - 33084015
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| |||||||| ||||||||| ||| |||||||||||||||||||    
T  33083964 taaagtaagcgtagcagaaatgaggatgctgcgttggatgtgtggtaagact 33084015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 407 - 464
Target Start/End: Complemental strand, 9594078 - 9594020
Alignment:
Q  407 gtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattag 464  Q
    ||||| |||||||||||||||| ||||||| ||||||||||| || |||||| ||||||    
T  9594078 gtagcggagatgaggatgttgcgttggatgagtggtaagactagacgggataggattag 9594020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 444
Target Start/End: Original strand, 2079229 - 2079286
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    |||| |||| ||||||||| ||||| ||||||| |||||||  |||||||||||||||    
T  2079229 aacacgagaataaaataagcgtagcggagatgatgatgttgtgttggatgtgtggtaa 2079286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 5258536 - 5258475
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||| ||| |||||||||| ||| |||| ||||||| ||||||| |||||||||||    
T  5258536 aacacgagagcaaagtaagtgtagcggaggtgagaatgttgcgttggatgagtggtaagact 5258475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 444
Target Start/End: Complemental strand, 6293734 - 6293698
Alignment:
Q  408 tagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    ||||||||||||||||||||  |||||||||||||||    
T  6293734 tagcagagatgaggatgttgtgttggatgtgtggtaa 6293698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 387 - 466
Target Start/End: Original strand, 30031152 - 30031232
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    ||||||||| | || | |||||||| ||||||||| |||||  ||||||| ||||||||||| || |||||| ||||||||    
T  30031152 aacatgagaatcaagttagtgtagcggagatgaggttgttgtgttggatgagtggtaagactagacgggataggattagaa 30031232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 36514581 - 36514530
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||||||||||||||||||||| |||||||||||||||||||    
T  36514581 taaattaagtgtagcagagatgaggatgttgcgttggatgtgtggtaagact 36514530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 11593856 - 11593934
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattag 464  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| ||||||||||| ||  ||||||||||||    
T  11593856 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagactagacaggataagattag 11593934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 402 - 466
Target Start/End: Original strand, 1740708 - 1740773
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact-ggagggataagattagaa 466  Q
    ||||||||||||||||||||||||||| |||||||||| |||||||| || ||| |||||||||||    
T  1740708 taagtgtagcagagatgaggatgttgcgttggatgtgtagtaagactaggtggggtaagattagaa 1740773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 31005119 - 31005180
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  31005119 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 31005180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 33072850 - 33072911
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | ||||||||||||||||||||| |||||||| ||||||| |||||||||||    
T  33072850 aacatgagaatcaaataagtgtagcagagatgatgatgttgcgttggatgagtggtaagact 33072911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 33350192 - 33350131
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  33350192 aacatgagaatcaagtaagtgtagcagagatgaggatgttgccttggatgagtggtaagact 33350131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 35906587 - 35906526
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  35906587 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 35906526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 399 - 466
Target Start/End: Complemental strand, 28542257 - 28542190
Alignment:
Q  399 aaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactggagggataagattagaa 466  Q
    ||||||||||||| ||||||||| |||||| ||||||||||||||||||| | ||||||  |||||||    
T  28542257 aaataagtgtagcggagatgagggtgttgcgttggatgtgtggtaagactagtgggatagaattagaa 28542190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 5335833 - 5335879
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||||||| ||| |||||||||||||||    
T  5335833 taagtgtagcagagatgaggatgttgcgttgaatgtgtggtaagact 5335879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 30200335 - 30200265
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||| | || |||||| ||||||||    
T  30200335 taaactaagtgtagcagagatgaggatgttgtgttggatgtgtggtaagattagatgggatatgattagaa 30200265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 14593677 - 14593718
Alignment:
Q  407 gtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  14593677 gtagcagagatgaggatgttgcgttggatgtgtggtaagact 14593718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 16013200 - 16013241
Alignment:
Q  407 gtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||| |||||||||||||||||||    
T  16013200 gtagcagagatgaggatgttgcgttggatgtgtggtaagact 16013241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 34869316 - 34869377
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||| ||||||||||||||||| ||||||| |||||||||||    
T  34869316 aacatgagaatcaagtaagtgtagtagagatgaggatgttgcgttggatgagtggtaagact 34869377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 36651890 - 36651951
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||||| |||||||||||||||||| ||||||| |||||||||||    
T  36651890 aacatgagaatcaagtaagtgtaacagagatgaggatgttgcgttggatgagtggtaagact 36651951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 402 - 451
Target Start/End: Complemental strand, 36869660 - 36869611
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga 451  Q
    ||||||||||||||||||||||||||  ||||||| ||||||||||||||    
T  36869660 taagtgtagcagagatgaggatgttgtgttggatgagtggtaagactgga 36869611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 448
Target Start/End: Original strand, 37617856 - 37617901
Alignment:
Q  403 aagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||    
T  37617856 aagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 37617901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 49029172 - 49029233
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||| | ||||||| |||||||||||    
T  49029172 aacatgagaatcaagtaagtgtagcagagatgaggatgttacgttggatgagtggtaagact 49029233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 448
Target Start/End: Original strand, 39811855 - 39811914
Alignment:
Q  389 catgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||| ||||| ||| ||||| || ||||||||||||| |||||||||||||||||||    
T  39811855 catgagaataaaacaagcgtagcggatatgaggatgttgctttggatgtgtggtaagact 39811914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 554 - 603
Target Start/End: Complemental strand, 6420690 - 6420641
Alignment:
Q  554 tagttaggagagtagatcaaatgaatgataatcaaatcactagaggcaga 603  Q
    |||| |||||||||||||| |||||||||| ||| |||||||||||||||    
T  6420690 tagtaaggagagtagatcagatgaatgatagtcagatcactagaggcaga 6420641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 12841661 - 12841604
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    ||||||||| | || ||||||||||||||||||||||||||  ||||||| |||||||    
T  12841661 aacatgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaa 12841604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 25579457 - 25579400
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    |||| |||| ||||||||| ||||  |||||||||||||||| |||||||||||||||    
T  25579457 aacacgagaataaaataagcgtagaggagatgaggatgttgcgttggatgtgtggtaa 25579400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 32630491 - 32630552
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||| |||||||||||||||   |||||| |||||||||||    
T  32630491 aacacgagagtaaagtaagtgtagcggagatgaggatgttgagctggatgagtggtaagact 32630552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 47848570 - 47848631
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| |||||||||| |||  |||||||||||||||  |||||||||||||||||||    
T  47848570 aacacgagaataaaataagtctaggggagatgaggatgttgtgttggatgtgtggtaagact 47848631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 389 - 448
Target Start/End: Complemental strand, 27022090 - 27022031
Alignment:
Q  389 catgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||| || |||||||||||| |  ||||| ||||||||||||||||||| |||||||    
T  27022090 catgagaatataataagtgtagcggcaatgagaatgttgcattggatgtgtgataagact 27022031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 393 - 448
Target Start/End: Original strand, 43281578 - 43281633
Alignment:
Q  393 agagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||| |||||||||| | ||||||||||||||  |||||| |||||||||||    
T  43281578 agagtaaagtaagtgtagcggggatgaggatgttgcgctggatgagtggtaagact 43281633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 13859374 - 13859333
Alignment:
Q  407 gtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||| ||||| | |||||||||||    
T  13859374 gtagcagagatgaggatgttgcgttggacgagtggtaagact 13859333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 24550053 - 24550012
Alignment:
Q  407 gtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||  |||||||||| ||||||||    
T  24550053 gtagcagagatgaggatgttgtgttggatgtgttgtaagact 24550012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 38606901 - 38606962
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||| |||||||  |||||||  |||||| |||||||||||    
T  38606901 aacacgagagtaaagtaagtgtagcggagatgataatgttgcgctggatgagtggtaagact 38606962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 410 - 466
Target Start/End: Complemental strand, 40139279 - 40139222
Alignment:
Q  410 gcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    ||||||| ||||||||||  | ||||||||||||||||| || |||||||||||||||    
T  40139279 gcagagacgaggatgttgtgtgggatgtgtggtaagactagacgggataagattagaa 40139222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 35559365 - 35559321
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    ||||||||| | ||||||||||||||| ||||||| |||||||||    
T  35559365 taagtgtagtaaagatgaggatgttgcgttggatgagtggtaaga 35559321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 448
Target Start/End: Original strand, 7825253 - 7825315
Alignment:
Q  386 gaacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||| |||| |||| ||||||||||| |||||||||| |||||||||||||||||||    
T  7825253 gaacatgagaataaagtaagcgtagcagagattaggatgttgcgttggatgtgtggtaagact 7825315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 397 - 466
Target Start/End: Complemental strand, 9647981 - 9647911
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    |||| ||| ||||||||||||||||||||||| ||||||||||||||||||| || | |||||||||||||    
T  9647981 taaattaaatgtagcagagatgaggatgttgcgttggatgtgtggtaagactagatgtgataagattagaa 9647911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 36183347 - 36183408
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  36183347 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 36183408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 387 - 466
Target Start/End: Complemental strand, 16097376 - 16097296
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    ||||||||| | || |||||||||| ||||||||||||||||| |||||| ||||||||||| || |||||| ||||||||    
T  16097376 aacatgagaatcaagtaagtgtagcggagatgaggatgttgcactggatgagtggtaagactagatgggatatgattagaa 16097296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 2610424 - 2610485
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  2610424 aacatgagaatcaagtaagtgtagcagagatgaggatgctgcgttggatgagtggtaagact 2610485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 3865968 - 3866029
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||||||||||||||| |||||||| ||||||| |||||||||||    
T  3865968 aacatgagaatcaagtaagtgtagcagagatgatgatgttgcgttggatgagtggtaagact 3866029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 8180676 - 8180737
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||  ||||||| |||||||||||    
T  8180676 aacatgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaagact 8180737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 38429780 - 38429841
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||| | |||||||||| |||||||||||||||| ||||||| |||||||||||    
T  38429780 aacacgagagtagagtaagtgtagcggagatgaggatgttgcgttggatgagtggtaagact 38429841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 41763427 - 41763366
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||| ||||||||||||||||  |||||| |||||||||||    
T  41763427 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgatggatgagtggtaagact 41763366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 448
Target Start/End: Original strand, 45077649 - 45077705
Alignment:
Q  392 gagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||||||||  |||| |||||||||||||||| |||||||||||||||||||    
T  45077649 gagaataaaataagcatagctgagatgaggatgttgcgttggatgtgtggtaagact 45077705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 4807488 - 4807547
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    ||||||||| | || ||||||||||||||||||||||||||| |||||||  ||||||||    
T  4807488 aacatgagaattaagtaagtgtagcagagatgaggatgttgcgttggatgaatggtaaga 4807547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 392 - 443
Target Start/End: Complemental strand, 28908283 - 28908232
Alignment:
Q  392 gagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggta 443  Q
    |||||||||||||||||||| |||||||| ||||| ||||| ||||||||||    
T  28908283 gagagtaaaataagtgtagcggagatgagaatgtttcattgaatgtgtggta 28908232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 408 - 466
Target Start/End: Original strand, 42092436 - 42092495
Alignment:
Q  408 tagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    |||||||||||| ||||||||||||||||||| |||||||| || |||||| ||||||||    
T  42092436 tagcagagatgatgatgttgcattggatgtgtagtaagactagacgggatatgattagaa 42092495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 452008 - 451947
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||| ||||||| || |||| |||||||||||    
T  452008 aacatgagaatcaagtaagtgtagcagagatgagtatgttgcgttagatgagtggtaagact 451947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 3244037 - 3243976
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||||||||||||| |||||||||| ||||||| || ||||||||    
T  3244037 aacatgagaatcaagtaagtgtagcagagataaggatgttgcgttggatgagtagtaagact 3243976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 444
Target Start/End: Complemental strand, 11992492 - 11992435
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    |||| ||||||||| |||||||||| ||||||||||||||||  |||||| |||||||    
T  11992492 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaa 11992435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 19337235 - 19337174
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| ||||||||| ||||  |||||||||||||| | |||||||||||||||||||    
T  19337235 aacacgagaataaaataagcgtagtggagatgaggatgttacgttggatgtgtggtaagact 19337174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 41197614 - 41197553
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||| ||||||||||||||||  | |||| |||||||||||    
T  41197614 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctagatgagtggtaagact 41197553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 440
Target Start/End: Original strand, 1456139 - 1456182
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtg 440  Q
    ||||||||||||||| |||||||||||||||  |||||||||||    
T  1456139 taaaataagtgtagcggagatgaggatgttgtgttggatgtgtg 1456182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 405 - 448
Target Start/End: Complemental strand, 38453057 - 38453014
Alignment:
Q  405 gtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||| ||||||||||||| ||||||| |||||||||||    
T  38453057 gtgtagcagacatgaggatgttgcgttggatgagtggtaagact 38453014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 406 - 444
Target Start/End: Original strand, 38434866 - 38434904
Alignment:
Q  406 tgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    |||||| |||||||||||||||||||||||| |||||||    
T  38434866 tgtagcggagatgaggatgttgcattggatgcgtggtaa 38434904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Complemental strand, 4598930 - 4598889
Alignment:
Q  407 gtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||| |||| |||||||| |||||||||||||||||||    
T  4598930 gtagcagaaatgatgatgttgcgttggatgtgtggtaagact 4598889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 414 - 451
Target Start/End: Complemental strand, 19527897 - 19527860
Alignment:
Q  414 agatgaggatgttgcattggatgtgtggtaagactgga 451  Q
    ||||||||||||||| |||||||||||| |||||||||    
T  19527897 agatgaggatgttgcgttggatgtgtggcaagactgga 19527860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 225 - 284
Target Start/End: Original strand, 2610263 - 2610323
Alignment:
Q  225 agatataaaccatcaaatttaagttggatggttgaaatggagaag-gccttaggtgtttta 284  Q
    |||| |||||||||| ||| ||| ||| ||||||||||||||||| |||| ||||||||||    
T  2610263 agatgtaaaccatcatattcaagctgggtggttgaaatggagaagagcctcaggtgtttta 2610323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 12494646 - 12494707
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  12494646 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 12494707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 31960200 - 31960139
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  31960200 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 31960139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 48622927 - 48622866
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  48622927 aacatgagaatcaagtaagtgtagcagagatgaggatgttgctttggatgagtggtaagact 48622866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 56375186 - 56375247
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | ||| |||||||||||||||||||||||||| ||||||| |||||||||||    
T  56375186 aacatgagaatcaaacaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 56375247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 387 - 447
Target Start/End: Complemental strand, 40933282 - 40933222
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagac 447  Q
    |||| ||||||||||||||||||||  ||||||||||||||| ||| ||||||||||||||    
T  40933282 aacacgagagtaaaataagtgtagcgtagatgaggatgttgcgttgaatgtgtggtaagac 40933222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 387 - 446
Target Start/End: Original strand, 29398715 - 29398773
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    ||||||||| ||||||||||||||| |||||||||||||||| |||||| ||||||||||    
T  29398715 aacatgagaataaaataagtgtagcggagatgaggatgttgc-ttggatttgtggtaaga 29398773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 17900386 - 17900456
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    |||| |||| |||||||| ||||||||||||| ||||||||||||||||||| || ||||||| |||||||    
T  17900386 taaagtaagcgtagcagaaatgaggatgttgcgttggatgtgtggtaagactagatgggataaaattagaa 17900456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 44860760 - 44860830
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    |||| ||||||||||||| ||||||||||||  ||||||||||||||||||| || || ||||||||||||    
T  44860760 taaattaagtgtagcagaaatgaggatgttgtgttggatgtgtggtaagactagatggaataagattagaa 44860830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 436125 - 436186
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| || ||||||||    
T  436125 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtcgtaagact 436186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 23906687 - 23906626
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  23906687 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggcaagact 23906626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 27450559 - 27450498
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||| ||||||||||||||||  |||||| |||||||||||    
T  27450559 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagact 27450498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 43433814 - 43433875
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||| ||||||    
T  43433814 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggcaagact 43433875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 50286867 - 50286928
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||| ||||| ||||||| |||||||||||    
T  50286867 aacatgagaatcaagtaagtgtagcagagatgaggaagttgcgttggatgagtggtaagact 50286928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 53707690 - 53707751
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| || ||||||||    
T  53707690 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtagtaagact 53707751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 392 - 444
Target Start/End: Original strand, 11389621 - 11389673
Alignment:
Q  392 gagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    |||| |||| |||| ||||||||||||||||||||| ||||||||||||||||    
T  11389621 gagaataaagtaagcgtagcagagatgaggatgttggattggatgtgtggtaa 11389673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 412 - 448
Target Start/End: Original strand, 54470128 - 54470164
Alignment:
Q  412 agagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||||||||||||||||||    
T  54470128 agagatgaggatgttgcattggatgtgtggtaagact 54470164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 33191234 - 33191175
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    ||||||||| | || |||||||||||||||||||||||||||  |||||| |||||||||    
T  33191234 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgctggatgagtggtaaga 33191175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 33227120 - 33227166
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||    
T  33227120 taagtgtagcagagatgaggatgttgcgctggatgagtggtaagact 33227166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 934821 - 934760
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||||  | ||||||| |||||| |||| ||||||||| ||||    
T  934821 aacatgagagtaaaataagtgtagtggggatgaggttgttgcgttggctgtgtggtatgact 934760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 4440751 - 4440812
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||||||||||||| |||||||||| || |||| |||||||||||    
T  4440751 aacatgagaatcaagtaagtgtagcagagattaggatgttgcgttcgatgagtggtaagact 4440812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 27991791 - 27991742
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    |||||||||||||||||| |||| |||||||  |||||||||||||||||    
T  27991791 taaaataagtgtagcagaaatgaagatgttgtgttggatgtgtggtaaga 27991742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 35690200 - 35690261
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||||||| |||||||||||||||| ||||||| || ||||||||    
T  35690200 aacatgagaatcaagtaagtgtagccgagatgaggatgttgcgttggatgagtagtaagact 35690261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 225 - 262
Target Start/End: Original strand, 43562433 - 43562470
Alignment:
Q  225 agatataaaccatcaaatttaagttggatggttgaaat 262  Q
    |||| |||||||||||||||||||||||||||||||||    
T  43562433 agatgtaaaccatcaaatttaagttggatggttgaaat 43562470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 46583210 - 46583149
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||||||||||||||||||||||||||| ||   |||||||||||    
T  46583210 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcattagagaagtggtaagact 46583149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 415 - 466
Target Start/End: Original strand, 2588905 - 2588957
Alignment:
Q  415 gatgaggatgttgcattggatgtgtggtaagact-ggagggataagattagaa 466  Q
    |||||||||||||| ||||||||||||||||||| | ||||||| ||||||||    
T  2588905 gatgaggatgttgcgttggatgtgtggtaagactagaagggataggattagaa 2588957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 227 - 267
Target Start/End: Original strand, 3273159 - 3273199
Alignment:
Q  227 atataaaccatcaaatttaagttggatggttgaaatggaga 267  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  3273159 atataaaccatcgaattcaagttggatggttgaaatggaga 3273199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 33709836 - 33709876
Alignment:
Q  408 tagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  33709836 tagcagagatgatgatgttgcgttggatgtgtggtaagact 33709876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 31458934 - 31458985
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||||| ||||||||||||||| |||| || |||||||||||    
T  31458934 taaagtaagtgtagcacagatgaggatgttgcgttggttgagtggtaagact 31458985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 1777386 - 1777340
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||| ||||| ||||||||||||||| ||||||| |||||||||||    
T  1777386 taagtatagcaaagatgaggatgttgcgttggatgagtggtaagact 1777340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 467
Target Start/End: Complemental strand, 7092590 - 7092524
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact-ggagggataagattagaat 467  Q
    ||||||||||||||||||||||||||   |||||| |||||||| || | ||||||| |||||||||    
T  7092590 taagtgtagcagagatgaggatgttgtgctggatgagtggtaagtctagaagggatatgattagaat 7092524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 48174464 - 48174418
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||| ||||| ||||||||||||||| ||||||| |||||||||||    
T  48174464 taagtatagcaaagatgaggatgttgcgttggatgagtggtaagact 48174418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 27983096 - 27983157
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||| |||||||||| ||||||||||| |||   | |||| |||||||||||    
T  27983096 aacatgagagtaaagtaagtgtagcggagatgaggatattgtgctagatgagtggtaagact 27983157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 49739180 - 49739119
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||||||||||||| ||||  || ||| ||||||||| || ||||||||||||||||    
T  49739180 aacaagagagtaaaataagcgtagtggaaatggggatgttgcgttagatgtgtggtaagact 49739119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 52569901 - 52569840
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||||||||||||| |||||||||  ||||||| | |||||||||    
T  52569901 aacatgagaatcaagtaagtgtagcagagatcaggatgttgtgttggatgaggggtaagact 52569840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 554 - 619
Target Start/End: Original strand, 54934982 - 54935047
Alignment:
Q  554 tagttaggagagtagatcaaatgaatgataatcaaatcactagaggcagatgatgacgtagaaaaa 619  Q
    |||| |||||||||||||||| | |||||| | | |||||||||||||||||| ||| || |||||    
T  54934982 tagtgaggagagtagatcaaaaggatgatagttagatcactagaggcagatgaagacctaaaaaaa 54935047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 402 - 446
Target Start/End: Complemental strand, 43070135 - 43070091
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    ||||||||||||||||||  ||||||  |||||||||||||||||    
T  43070135 taagtgtagcagagatgatcatgttgggttggatgtgtggtaaga 43070091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 1210641 - 1210702
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  1210641 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 1210702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 9592630 - 9592691
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  9592630 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 9592691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 30202516 - 30202455
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  30202516 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 30202455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 43240767 - 43240706
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  43240767 aacatgagaatcaagtaagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 43240706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 397 - 448
Target Start/End: Original strand, 26016343 - 26016394
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| |||||||||||||||||||||| |||||||||||||||||||    
T  26016343 taaagtaagcgtagcagagatgaggatgttgcgttggatgtgtggtaagact 26016394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 696165 - 696226
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||| ||||||||||||||||  |||||| |||||||||||    
T  696165 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggatgagtggtaagact 696226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 8671816 - 8671877
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||||||||||||| |||||||||| ||||||| |||||||||||    
T  8671816 aacatgagaatcaagtaagtgtagcagagataaggatgttgcgttggatgagtggtaagact 8671877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 49347779 - 49347718
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||| ||||||||||||||| ||||||| |||||||||||    
T  49347779 aacatgagaatcaagtaagtgtagcaaagatgaggatgttgcgttggatgagtggtaagact 49347718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 51441151 - 51441090
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || | ||||||||||||||||||||||||||||||| | |||||||||||    
T  51441151 aacatgagaatcaagtgagtgtagcagagatgaggatgttgcattggacgagtggtaagact 51441090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 8391668 - 8391729
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||| ||||||| |||||||  ||||||| |||||||||||    
T  8391668 aacacgagagtaaagtaagtgtagcggagatgaagatgttgtgttggatgagtggtaagact 8391729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 15085830 - 15085891
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||||||| ||||||||||||||||  |||| | |||||||||||    
T  15085830 aacacgagagtaaagtaagtgtagcggagatgaggatgttgcgctggacgagtggtaagact 15085891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 22089990 - 22090051
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||| ||  ||||||| |||||||||||    
T  22089990 aacatgagaatcaagtaagtgtagcagagatgaggatgctgtgttggatgagtggtaagact 22090051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 32083131 - 32083070
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| || ||||||| ||||||||||||||||  |||||| |||||||||||    
T  32083131 aacacgagagtaaagtatgtgtagcggagatgaggatgttgcgctggatgagtggtaagact 32083070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 34792719 - 34792674
Alignment:
Q  403 aagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||||||  |||||| |||||||||||    
T  34792719 aagtgtagcagagatgaggatgttgcgctggatgagtggtaagact 34792674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 428
Target Start/End: Complemental strand, 38877719 - 38877678
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgc 428  Q
    |||| |||| ||||||||||||||||||||||||||||||||    
T  38877719 aacacgagaataaaataagtgtagcagagatgaggatgttgc 38877678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 402 - 464
Target Start/End: Complemental strand, 9599765 - 9599702
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattag 464  Q
    |||| |||||||||||||||||||||  ||||||| ||||||||||| || |||||| ||||||    
T  9599765 taagcgtagcagagatgaggatgttgtgttggatgagtggtaagactagacgggatatgattag 9599702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 397 - 448
Target Start/End: Complemental strand, 52442880 - 52442829
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| |||||||| ||||||||||||  |||||||||||||||||||    
T  52442880 taaattaagcgtagcagacatgaggatgttgtgttggatgtgtggtaagact 52442829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 557 - 603
Target Start/End: Original strand, 50846650 - 50846696
Alignment:
Q  557 ttaggagagtagatcaaatgaatgataatcaaatcactagaggcaga 603  Q
    |||||||||||||||| ||| | |||||||| |||||||||||||||    
T  50846650 ttaggagagtagatcagatggaggataatcatatcactagaggcaga 50846696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 399 - 448
Target Start/End: Complemental strand, 34827476 - 34827427
Alignment:
Q  399 aaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||| | |||||||||||||||  ||||||| |||||||||||    
T  34827476 aaataagtgtaactgagatgaggatgttgtgttggatgagtggtaagact 34827427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 403 - 448
Target Start/End: Complemental strand, 37463241 - 37463196
Alignment:
Q  403 aagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||  |||||||||||||| ||||||||| |||||||||||    
T  37463241 aagtgtagaggagatgaggatgtttcattggatgagtggtaagact 37463196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 51601954 - 51602015
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||| ||| ||||||||||||| || |||| |||||||||||    
T  51601954 aacatgagaatcaagtaagtgtagtagatatgaggatgttgcgttagatgagtggtaagact 51602015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 408 - 448
Target Start/End: Original strand, 4379922 - 4379962
Alignment:
Q  408 tagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||||||||||||||  |||||||||||||||||||    
T  4379922 tagctgagatgaggatgttgtgttggatgtgtggtaagact 4379962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 619
Target Start/End: Original strand, 6025692 - 6025752
Alignment:
Q  559 aggagagtagatcaaatgaatgataatcaaatcactagaggcagatgatgacgtagaaaaa 619  Q
    |||||||||||||| ||| | | || ||||||||||||||||||| || ||| ||||||||    
T  6025692 aggagagtagatcagatgtagggtagtcaaatcactagaggcagaggaagacctagaaaaa 6025752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 404 - 448
Target Start/End: Original strand, 6641045 - 6641089
Alignment:
Q  404 agtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||| |||| |||||||| |||||||||||||| ||||    
T  6641045 agtgtagcagaaatgatgatgttgcgttggatgtgtggtatgact 6641089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 404 - 447
Target Start/End: Complemental strand, 30456580 - 30456537
Alignment:
Q  404 agtgtagcagagatgaggatgttgcattggatgtgtggtaagac 447  Q
    ||||||||||||||||||||||||| ||||||||||||||||||    
T  30456580 agtgtagcagagatgaggatgttgcgttggatgtgtggtaagac 30456537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 39946768 - 39946814
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||||||| ||||||| |||||||||||    
T  39946768 taagtgtagcagagatgaggatgttgcgttggatgagtggtaagact 39946814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 36545043 - 36545104
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || ||||||||||||||||||||||||||  ||||||| |||||||||||    
T  36545043 aacatgagaatcaagtaagtgtagcagagatgaggatgttgtgttggatgagtggtaagact 36545104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 389 - 448
Target Start/End: Original strand, 40813220 - 40813279
Alignment:
Q  389 catgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||| |||| |||||||||||||||| |||||||||  ||||||| |||||||||||    
T  40813220 catgagaataaagtaagtgtagcagagattaggatgttgtgttggatgagtggtaagact 40813279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 398 - 448
Target Start/End: Complemental strand, 2518765 - 2518716
Alignment:
Q  398 aaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||| | |||||| |||||||||||||||||||||||||||    
T  2518765 aaaataagtgtagcgg-gatgagaatgttgcattggatgtgtggtaagact 2518716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 12492213 - 12492167
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||| ||||||||||||| ||||||| |||||||||||    
T  12492213 taagtgtagcagatatgaggatgttgcgttggatgagtggtaagact 12492167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 406 - 448
Target Start/End: Complemental strand, 36395317 - 36395275
Alignment:
Q  406 tgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||| ||||||| |||||||||||    
T  36395317 tgtagcagagatgaggatgttgcgttggatgagtggtaagact 36395275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 36565612 - 36565566
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||| ||| ||||||| |||||||||||    
T  36565612 taagtgtagcagagatgaggatgatgcgttggatgagtggtaagact 36565566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 414 - 466
Target Start/End: Original strand, 29520583 - 29520636
Alignment:
Q  414 agatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    ||||||||||||||| ||||||||||||||||||| || |||||| ||||||||    
T  29520583 agatgaggatgttgcgttggatgtgtggtaagactagatgggataggattagaa 29520636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 42493680 - 42493631
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    |||| ||||||||||| ||||||||||||||| |||| ||||||||||||    
T  42493680 taaattaagtgtagcaaagatgaggatgttgcgttggttgtgtggtaaga 42493631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 411 - 466
Target Start/End: Complemental strand, 13172011 - 13171955
Alignment:
Q  411 cagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    |||||||||| |||||||||||||||||| |||||||| || |||||| ||||||||    
T  13172011 cagagatgagaatgttgcattggatgtgtagtaagactagacgggataggattagaa 13171955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 403 - 443
Target Start/End: Complemental strand, 39760794 - 39760754
Alignment:
Q  403 aagtgtagcagagatgaggatgttgcattggatgtgtggta 443  Q
    |||||||||||||||||||||||||  ||||||||||||||    
T  39760794 aagtgtagcagagatgaggatgttgtgttggatgtgtggta 39760754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 407 - 446
Target Start/End: Complemental strand, 39953630 - 39953591
Alignment:
Q  407 gtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    |||||||||||||| ||||||| |||||||||||||||||    
T  39953630 gtagcagagatgagaatgttgcgttggatgtgtggtaaga 39953591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 410 - 444
Target Start/End: Original strand, 78952 - 78986
Alignment:
Q  410 gcagagatgaggatgttgcattggatgtgtggtaa 444  Q
    |||||||||||||||||||| ||||||||||||||    
T  78952 gcagagatgaggatgttgcagtggatgtgtggtaa 78986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 402 - 448
Target Start/End: Original strand, 2796466 - 2796512
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||| |||||||||||||||  |||||| |||||||||||    
T  2796466 taagtgtagcaaagatgaggatgttgcgctggatgagtggtaagact 2796512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 387 - 441
Target Start/End: Complemental strand, 33666883 - 33666829
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtgg 441  Q
    ||||||||||||||||||| | |||||||||||| || ||  |||||||||||||    
T  33666883 aacatgagagtaaaataagcgcagcagagatgagaatattttattggatgtgtgg 33666829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 397 - 466
Target Start/End: Original strand, 36069549 - 36069619
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattagaa 466  Q
    ||||||||||| |||  | | ||||||||||  ||||||||||||||||||| || |||||||||||||||    
T  36069549 taaaataagtgcagcgcaaacgaggatgttgtgttggatgtgtggtaagactagacgggataagattagaa 36069619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 414 - 448
Target Start/End: Complemental strand, 44681435 - 44681401
Alignment:
Q  414 agatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||||||||| ||||||||||||||||||||    
T  44681435 agatgaggatgttgtattggatgtgtggtaagact 44681401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 15215657 - 15215596
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| ||||||||| |||||| ||| |||||||||||||||   |||||| |||||||||||    
T  15215657 aacacgagagtaaagtaagtgaagcggagatgaggatgttgtgctggatgagtggtaagact 15215596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 446
Target Start/End: Complemental strand, 41972150 - 41972101
Alignment:
Q  397 taaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaaga 446  Q
    ||||||||||| ||  ||||||||||||||| |||||||||||| |||||    
T  41972150 taaaataagtgcagtggagatgaggatgttgtattggatgtgtgataaga 41972101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 407 - 448
Target Start/End: Original strand, 43732483 - 43732524
Alignment:
Q  407 gtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||||||| ||||||||||| | |||||||||||||||||||    
T  43732483 gtagcagaaatgaggatgttacgttggatgtgtggtaagact 43732524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 559 - 619
Target Start/End: Complemental strand, 35362845 - 35362785
Alignment:
Q  559 aggagagtagatcaaatgaatgataatcaaatcactagaggcagatgatgacgtagaaaaa 619  Q
    |||||||||||||||||| | |||| ||||||| ||| ||||||| || ||| ||||||||    
T  35362845 aggagagtagatcaaatggaggatagtcaaatccctataggcagaggaagacctagaaaaa 35362785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0570 (Bit Score: 39; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0570
Description:

Target: scaffold0570; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 402 - 448
Target Start/End: Complemental strand, 2641 - 2595
Alignment:
Q  402 taagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||||||||||||||||||| ||||||||| |||||||||||    
T  2641 taagtgtagcagagatgaggatgtttcattggatgagtggtaagact 2595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 39; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 464
Target Start/End: Original strand, 31364 - 31442
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagactgga-gggataagattag 464  Q
    ||||||||| | || |||||||||||||||| |||||||||| ||||||| ||||||||||| ||  ||||||||||||    
T  31364 aacatgagaatcaagtaagtgtagcagagattaggatgttgcgttggatgagtggtaagactagacaggataagattag 31442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 44257 - 44196
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    |||| |||| ||||||||| | ||| |||||||||||||||| ||||||||| |||||||||    
T  44257 aacacgagaataaaataagcgcagcggagatgaggatgttgcgttggatgtgcggtaagact 44196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0157 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 25831 - 25770
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||||||||||||| |||||||||  ||||||| |||||||||||    
T  25831 aacatgagaatcaagtaagtgtagcagagattaggatgttgtgttggatgagtggtaagact 25770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Complemental strand, 11984 - 11923
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || || ||||||||||||||||||||||||  |||||| | |||||||||    
T  11984 aacatgagaatcaagtatgtgtagcagagatgaggatgttgcgctggatgagcggtaagact 11923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 387 - 448
Target Start/End: Original strand, 82617 - 82678
Alignment:
Q  387 aacatgagagtaaaataagtgtagcagagatgaggatgttgcattggatgtgtggtaagact 448  Q
    ||||||||| | || |||||| ||| ||||||||||||||||| |||||| || ||||||||    
T  82617 aacatgagaatcaagtaagtgcagcggagatgaggatgttgcactggatgagtagtaagact 82678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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