View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7727_high_37 (Length: 236)

Name: NF7727_high_37
Description: NF7727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7727_high_37
NF7727_high_37
[»] chr3 (22 HSPs)
chr3 (1-226)||(2818507-2818732)
chr3 (5-218)||(2759172-2759385)
chr3 (6-218)||(2838568-2838780)
chr3 (4-218)||(2807225-2807439)
chr3 (4-218)||(2769027-2769241)
chr3 (4-218)||(2855776-2855990)
chr3 (4-217)||(2797320-2797533)
chr3 (4-218)||(2748953-2749167)
chr3 (6-218)||(5412844-5413056)
chr3 (52-217)||(2790326-2790491)
chr3 (33-107)||(21945658-21945732)
chr3 (33-107)||(21930455-21930529)
chr3 (33-107)||(22028034-22028108)
chr3 (33-107)||(22034551-22034625)
chr3 (33-107)||(22052767-22052841)
chr3 (33-107)||(22187022-22187096)
chr3 (33-107)||(21937187-21937261)
chr3 (33-107)||(22104757-22104831)
chr3 (33-107)||(22115119-22115193)
chr3 (25-83)||(22368262-22368320)
chr3 (33-107)||(22648516-22648590)
chr3 (33-65)||(22208096-22208128)
[»] scaffold0691 (1 HSPs)
scaffold0691 (4-218)||(6118-6332)
[»] chr8 (1 HSPs)
chr8 (33-103)||(27294586-27294656)


Alignment Details
Target: chr3 (Bit Score: 190; Significance: 1e-103; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 2818732 - 2818507
Alignment:
Q  1 gctcgacaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacag 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| ||||| |    
T  2818732 gctcgacaatcaaactgtgttgttaccttttggctgtcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatcactg 2818633  T
Q  101 tgcgctcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcg 200  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  2818632 tgcgctcggctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagacagtcg 2818533  T
Q  201 aggatcacgccatcttcctgtctctg 226  Q
    |||||||||||||| |||||| ||||    
T  2818532 aggatcacgccatcctcctgtgtctg 2818507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 5 - 218
Target Start/End: Complemental strand, 2759385 - 2759172
Alignment:
Q  5 gacaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcg 104  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||    
T  2759385 gacaatcaaactgtgttgttaccttttggctgtcaaaaactagcttggcaagagtggttttgccgagaccccccattcctaccactgaaatcactgtgcg 2759286  T
Q  105 ctcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgagga 204  Q
     ||||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||    
T  2759285 ttcagctgaaccctccaataaccaaccatatagttcttcttttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcgagga 2759186  T
Q  205 tcacgccatcttcc 218  Q
    ||||||||||||||    
T  2759185 tcacgccatcttcc 2759172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 6 - 218
Target Start/End: Original strand, 2838568 - 2838780
Alignment:
Q  6 acaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgc 105  Q
    ||||||||| | || ||| ||||||||||| ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||| || || ||||||    
T  2838568 acaatcaaagtttgctgttaccttttggctttcaaaaactagcttggcaagagtggtttttcctagaccccccattcctaccactgatatgactgtgcgc 2838667  T
Q  106 tcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgaggat 205  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||| |    
T  2838668 tcagctgcaccctccaataaccaaccatatatttcttctcttgggccttcaaatcctacaatttctgtttcttcaatgaaaagggaagacagtcgagggt 2838767  T
Q  206 cacgccatcttcc 218  Q
    |  ||||||||||    
T  2838768 cgtgccatcttcc 2838780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 2807439 - 2807225
Alignment:
Q  4 cgacaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgc 103  Q
    ||||||||||| |||||||| ||| ||||||| ||||||||| ||||||||||||||||||| |||||||| |||||||||||||| |||||||| ||||    
T  2807439 cgacaatcaaagtgtgttgttaccgtttggctatcaaaaactagcttggcaagagtggtttttcctagacctcccattcctaccaccgaaatcaccgtgc 2807340  T
Q  104 gctcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgagg 203  Q
    |||||||| ||||||||||||||||| || | | ||||||||| |||  |||||||||||| |||||| |||||||||| ||||| ||||| ||||||||    
T  2807339 gctcagctacaccctccaataaccaaacagacatttcttctcttgggaattcaaatcctacaatttctctttcttcaataaaaagggaagacagtcgagg 2807240  T
Q  204 atcacgccatcttcc 218  Q
    |||||||||||||||    
T  2807239 atcacgccatcttcc 2807225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 2769241 - 2769027
Alignment:
Q  4 cgacaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgc 103  Q
    ||||||||||| | ||  || ||||||||||||||| ||||| | ||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  2769241 cgacaatcaaagtttgcagttaccttttggctgtcataaactagtttggcaagagtggtttttcctagaccccccattcctaccactgatatcactgtgc 2769142  T
Q  104 gctcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgagg 203  Q
    ||| ||||||||||||||||||||||||| ||| ||||||||| |||||||| |||||||| ||||||||||||||||| || || ||||| |  |||||    
T  2769141 gcttagctgcaccctccaataaccaaccaaataattcttctcttgggccttccaatcctacaatttctgtttcttcaataaagagggaagacatccgagg 2769042  T
Q  204 atcacgccatcttcc 218  Q
    |||||||||||||||    
T  2769041 atcacgccatcttcc 2769027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 2855776 - 2855990
Alignment:
Q  4 cgacaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgc 103  Q
    ||||||||||| | |||||| ||||||||||||||||||| | ||||||||||||| ||||| |||| |||||||||||| ||||||||||||||  |||    
T  2855776 cgacaatcaaagtttgttgttaccttttggctgtcaaaaattagcttggcaagagtagtttttcctataccccccattcccaccactgaaatcactttgc 2855875  T
Q  104 gctcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgagg 203  Q
    |||||| |  ||| ||||||||||||||| | | ||||||| | ||||||||||  ||||| | ||||||||||||||||||||| ||||| ||||||||    
T  2855876 gctcagatataccttccaataaccaaccagacaattcttcttttgggccttcaatgcctacaacttctgtttcttcaatgaaaagggaagacagtcgagg 2855975  T
Q  204 atcacgccatcttcc 218  Q
    |||||||||||||||    
T  2855976 atcacgccatcttcc 2855990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 4 - 217
Target Start/End: Complemental strand, 2797533 - 2797320
Alignment:
Q  4 cgacaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgc 103  Q
    ||||||||||| | |||||| |||||||| ||||| |||||| ||||||||||||||||||| |||||||| |||||||| |||||||||||||| ||||    
T  2797533 cgacaatcaaattttgttgttaccttttgactgtcgaaaactagcttggcaagagtggtttttcctagacctcccattccaaccactgaaatcactgtgc 2797434  T
Q  104 gctcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgagg 203  Q
    |||||||||  ||||| | |||||||||| | | |||||| ||||||||||||||||| || ||| | ||||||||||| ||||| ||||| ||||||||    
T  2797433 gctcagctgtgccctctagtaaccaaccagacaattcttccctcgggccttcaaatccgacaattgcagtttcttcaataaaaagggaagacagtcgagg 2797334  T
Q  204 atcacgccatcttc 217  Q
    ||||| ||||||||    
T  2797333 atcacaccatcttc 2797320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 4 - 218
Target Start/End: Complemental strand, 2749167 - 2748953
Alignment:
Q  4 cgacaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgc 103  Q
    ||||||||||| |||| ||  ||||||| ||| ||||||||| ||||||||||||||||||| ||||| || |||||||||||||| || ||||| ||||    
T  2749167 cgacaatcaaagtgtgctgatacctttttgctttcaaaaactagcttggcaagagtggtttttcctaggcctcccattcctaccacggatatcaccgtgc 2749068  T
Q  104 gctcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgagg 203  Q
    |||||||| |||| ||||||||||||||| | ||||||||| | ||| ||||||  || || | ||||||||||||||| ||||||||||| ||||||||    
T  2749067 gctcagcttcaccatccaataaccaaccagacagttcttcttttgggacttcaataccaacaacttctgtttcttcaataaaaagagaagacagtcgagg 2748968  T
Q  204 atcacgccatcttcc 218  Q
    |||| ||||| ||||    
T  2748967 atcatgccattttcc 2748953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 6 - 218
Target Start/End: Complemental strand, 5413056 - 5412844
Alignment:
Q  6 acaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgc 105  Q
    ||||||||| |||| ||  ||||||||||| ||||||||| ||||||||||||||||||| ||||| |||||||||||||||||||| || || || ||     
T  5413056 acaatcaaagtgtgctgataccttttggctttcaaaaactagcttggcaagagtggtttttcctaggccccccattcctaccactgatatgactgtacgt 5412957  T
Q  106 tcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgaggat 205  Q
    || |||||||| ||||||||||||||| | | ||||||| | || ||||||| |||||| | ||||||||||  |||||| || ||||| ||||||||||    
T  5412956 tccgctgcaccatccaataaccaaccagacaattcttcttttggaccttcaattcctacaacttctgtttctgtaatgaatagggaagacagtcgaggat 5412857  T
Q  206 cacgccatcttcc 218  Q
    | |||||||||||    
T  5412856 ctcgccatcttcc 5412844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 52 - 217
Target Start/End: Complemental strand, 2790491 - 2790326
Alignment:
Q  52 gcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctcagctgcaccctccaataaccaaccatatagttcttctctcgggc 151  Q
    |||||||||||||| |||||||| |||||||| |||||||||||||| |||||||||||||  |||||||||||||||||| | | |||||| |||||||    
T  2790491 gcaagagtggtttttcctagacctcccattccaaccactgaaatcactgtgcgctcagctgtgccctccaataaccaaccagacaattcttccctcgggc 2790392  T
Q  152 cttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgaggatcacgccatcttc 217  Q
    |||||||||| || ||| | ||||||||||||||||| ||||| |  ||||||||| |||||||||    
T  2790391 cttcaaatccgacaattgcagtttcttcaatgaaaagggaagacaaccgaggatcatgccatcttc 2790326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 21945732 - 21945658
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    |||||||||||||| |||||| ||||||||||| ||| | || |||||||||||||| ||||  |||||||||||    
T  21945732 gctgtcaaaaactttcttggctagagtggtttttccttgccctcccattcctaccacggaaactacagtgcgctc 21945658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 21930529 - 21930455
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    |||||||||||||| |||||| ||||| ||||| ||| | || |||||||||||||| || | ||||||||||||    
T  21930529 gctgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccacagacaccacagtgcgctc 21930455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 22028108 - 22028034
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    |||||||||||||| |||||| ||||| ||||| ||| | || |||||||||||||| || | ||||||||||||    
T  22028108 gctgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccacagacaccacagtgcgctc 22028034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 22034625 - 22034551
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    |||||||||||||| |||||| ||||| ||||| ||| | || |||||||||||||| || | ||||||||||||    
T  22034625 gctgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccacagacaccacagtgcgctc 22034551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 22052841 - 22052767
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    |||||||||||||| |||||| ||||| ||||| ||| | || |||||||||||||  |||| ||||||||||||    
T  22052841 gctgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccagagaaaccacagtgcgctc 22052767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 22187096 - 22187022
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    |||||||||||||| |||||| ||||| ||||| ||| | || |||||||||||||| ||||  |||||||||||    
T  22187096 gctgtcaaaaactttcttggctagagttgtttttccttgccctcccattcctaccacagaaagaacagtgcgctc 22187022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 21937261 - 21937187
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    |||||||||| ||| ||| || ||||||||||| ||| | || |||||||||||||| ||||  |||||||||||    
T  21937261 gctgtcaaaagctttcttagctagagtggtttttccttgccctcccattcctaccacagaaacaacagtgcgctc 21937187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 22104831 - 22104757
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    |||||||||||||  |||||| ||||| ||||| ||| | || |||||||||||||| ||||  |||||||||||    
T  22104831 gctgtcaaaaactctcttggctagagttgtttttccttgccctcccattcctaccaccgaaactacagtgcgctc 22104757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Complemental strand, 22115193 - 22115119
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    |||||||||||||| ||| |  ||||||||||| ||| | || |||||||||||||| ||||  |||||||||||    
T  22115193 gctgtcaaaaactttctttgatagagtggtttttccttgccctcccattcctaccacagaaagaacagtgcgctc 22115119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 83
Target Start/End: Original strand, 22368262 - 22368320
Alignment:
Q  25 accttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcc 83  Q
    ||||||||| |||||||||||| |||||| ||||||||||| || || || ||||||||    
T  22368262 accttttggttgtcaaaaactttcttggctagagtggtttttcccagtcctcccattcc 22368320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 107
Target Start/End: Original strand, 22648516 - 22648590
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgcgctc 107  Q
    ||||||||| ||||   |||||||||||||||| ||||| || ||||| |||||||| || || |||||||||||    
T  22648516 gctgtcaaacacttttctggcaagagtggtttttcctagccctcccatacctaccacagagatgacagtgcgctc 22648590  T

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Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 33 - 65
Target Start/End: Complemental strand, 22208128 - 22208096
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggtttt 65  Q
    ||||||||||||||||||||||||||| |||||    
T  22208128 gctgtcaaaaacttgcttggcaagagttgtttt 22208096  T

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Target: scaffold0691 (Bit Score: 127; Significance: 1e-65; HSPs: 1)
Name: scaffold0691
Description:

Target: scaffold0691; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 4 - 218
Target Start/End: Original strand, 6118 - 6332
Alignment:
Q  4 cgacaatcaaactgtgttgtcaccttttggctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgc 103  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||||||||||||||||||| |||| ||| |||||||||||||||||||| || ||||    
T  6118 cgacaatcaaattgtgttgttaccttttggctgtcaaaaactagcttggcaagagtggttttccctatacctcccattcctaccactgaaattacggtgc 6217  T
Q  104 gctcagctgcaccctccaataaccaaccatatagttcttctctcgggccttcaaatcctacgatttctgtttcttcaatgaaaagagaagagagtcgagg 203  Q
    ||||||||| || |||||||||||||||||||| ||| ||||| |||||||| |||||||| | ||| ||||||||||| ||||| | ||| | ||||||    
T  6218 gctcagctggactctccaataaccaaccatataattcctctcttgggccttcgaatcctacaacttcagtttcttcaataaaaagggcagataatcgagg 6317  T
Q  204 atcacgccatcttcc 218  Q
    |||||||||||||||    
T  6318 atcacgccatcttcc 6332  T

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Target: chr8 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 33 - 103
Target Start/End: Complemental strand, 27294656 - 27294586
Alignment:
Q  33 gctgtcaaaaacttgcttggcaagagtggttttgcctagaccccccattcctaccactgaaatcacagtgc 103  Q
    |||||||||||||| |||| | ||||||||||| ||| | || |||||||||||||| ||||  |||||||    
T  27294656 gctgtcaaaaactttcttgactagagtggtttttccttgtcctcccattcctaccacagaaactacagtgc 27294586  T

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