View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7727_high_46 (Length: 201)
Name: NF7727_high_46
Description: NF7727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7727_high_46 |
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Alignment Details
Target: chr2 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 19 - 191
Target Start/End: Complemental strand, 43827855 - 43827683
Alignment:
| Q |
19 |
accttgacagtaacttctgccttgaaaggcctgctagcaccccaaatgatcaagcaaaacacagtaaaaacaaccagaaaagtaaacacagcaatcaaag |
118 |
Q |
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| T |
43827855 |
accttgacagtaacttctgccttgaaaggcctgctagcaccccaaatgatcaagcaaaacacagtaaaaacaaccagaaaagtaaacacagcaatcaaag |
43827756 |
T |
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| Q |
119 |
cttgaaatcttctagcaaaagacatatcctcgaattcacgataagaaccttcttcaagaataacaccaaactc |
191 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
43827755 |
cttgaaatcttctagcaaaagacatatcctcgaattcacgataagaaccttcttcaagaataacaccacactc |
43827683 |
T |
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