View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF7727_low_20 (Length: 406)
Name: NF7727_low_20
Description: NF7727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7727_low_20 |
 |  |
|
Alignment Details
Target: chr3 (Bit Score: 301; Significance: 1e-169; HSPs: 2)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 301; E-Value: 1e-169
Query Start/End: Original strand, 1 - 404
Target Start/End: Complemental strand, 8525239 - 8524833
Alignment:
| Q |
1 |
agagctctgctttgcttcatttcaagtcatccttcattataaattctgaatatgctcatt---atggttgtgatgaattttctcttttgaaaacagcaac |
97 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||| |||| ||| || ||||||||||| | |||||||||||||||||| |
|
|
| T |
8525239 |
agagctctgctttgcttcatttcaagtcatccttcactataaattctgaacctgcttattcttatttttgtgatgaatctcgtcttttgaaaacagcaac |
8525140 |
T |
 |
| Q |
98 |
atggaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggctgtgaaggtcttcaa |
197 |
Q |
| |
|
|||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||||||||||||||||||| |
|
|
| T |
8525139 |
atggaaaaatgagattgattgctgctcatgggatggtgtcacgtgtgacaccatcagtggtcacgtgattggcctcaaccttggctgtgaaggtcttcaa |
8525040 |
T |
 |
| Q |
198 |
ggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctggctcttattttcattcaaagt |
297 |
Q |
| |
|
|| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
8525039 |
ggcatactcaatcctaacagtacccttttccatcttgcttatattcaaaaactcaaccttgctaacaatgatttctctggctcttattttcattcaaagt |
8524940 |
T |
 |
| Q |
298 |
ttggtgggtttttgagtctcacacatcttgacttgtctcgtagtttctttaaaggtgaaattccaactcaaatctcacacctttgcaaattacaatcact |
397 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
8524939 |
ttggtgggtttttgagtctcacacatcttgacttgtctcatagttaccttaaaggtgaaattccaactcaaatctcacacctttgcaaattacaatcact |
8524840 |
T |
 |
| Q |
398 |
tcatctc |
404 |
Q |
| |
|
||||||| |
|
|
| T |
8524839 |
tcatctc |
8524833 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 126 - 179
Target Start/End: Complemental strand, 14554505 - 14554452
Alignment:
| Q |
126 |
tgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaacctt |
179 |
Q |
| |
|
||||||||||||||||| |||||||| | |||||||||||||||||| ||||| |
|
|
| T |
14554505 |
tgggatggtgtcacgtgcgacaccatatcaggtcacgtgattgaactagacctt |
14554452 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 203; Significance: 1e-111; HSPs: 9)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 203; E-Value: 1e-111
Query Start/End: Original strand, 78 - 404
Target Start/End: Complemental strand, 42125704 - 42125378
Alignment:
| Q |
78 |
tctcttttgaaaacagcaacatggaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaacc |
177 |
Q |
| |
|
|||||| |||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||| |||||||||||| || || | |
|
|
| T |
42125704 |
tctcttctgaaaacagcaacatggaaaaatgggactgattgctgctcatggaatggtgtcacgtgtgataccatcactcgtcacgtgattggcctcaatc |
42125605 |
T |
 |
| Q |
178 |
ttggctgtgaaggtcttcaaggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctgg |
277 |
Q |
| |
|
||||||||||||| |||||||||| | | ||||||||||||||||||| |||||| | || |||||| |||||| |||||||||||| |||||||| |
|
|
| T |
42125604 |
ttggctgtgaaggccttcaaggtaaactacatcctaacagtacccttttcaatcttgttcatcttcaaacactcaacctttctaacaatgatttctctta |
42125505 |
T |
 |
| Q |
278 |
ctcttattttcattcaaagtttggtgggtttttgagtctcacacatcttgacttgtctcgtagtttctttaaaggtgaaattccaactcaaatctcacac |
377 |
Q |
| |
|
|||| |||||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
42125504 |
ctctcattttcattctaagtttggtgggtttatgagtcttgcacatcttgacttgtctcgtagtttctttaaaggtgaaattccaattcaaatctcacac |
42125405 |
T |
 |
| Q |
378 |
ctttgcaaattacaatcacttcatctc |
404 |
Q |
| |
|
|||| |||||||||||||||||||||| |
|
|
| T |
42125404 |
ctttccaaattacaatcacttcatctc |
42125378 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 87 - 404
Target Start/End: Complemental strand, 42130920 - 42130603
Alignment:
| Q |
87 |
aaaacagcaacatggaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggctgtg |
186 |
Q |
| |
|
|||||||||||||||||||||| ||||||||||||||||||| |||| |||||||||||||| || |||||||||||||||| || ||||||||||||| |
|
|
| T |
42130920 |
aaaacagcaacatggaaaaatgggactgattgctgctcatggaatggcgtcacgtgtgacacagtctctggtcacgtgattgacctcaaccttggctgtg |
42130821 |
T |
 |
| Q |
187 |
aaggtcttcaaggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctggctcttattt |
286 |
Q |
| |
|
|||| ||| ||||| ||||| |||||| ||||||||||| ||||||| | || | |||| |||||| |||||| ||||| |||||| || |||| |||| |
|
|
| T |
42130820 |
aaggccttacaggtacattcaatcctaatagtaccctttttcatcttgttcatctccaaacactcaacctttcttacaatgatttctttgactctcattt |
42130721 |
T |
 |
| Q |
287 |
tcattcaaagtttggtgggtttttgagtctcacacatcttgacttgtctcgtagtttctttaaaggtgaaattccaactcaaatctcacacctttgcaaa |
386 |
Q |
| |
|
||||| |||||| |||| ||| |||||| |||||||||||||||||| |||| ||| ||||||||||||||||||||||||| ||||| | |||| |
|
|
| T |
42130720 |
tcattataagttttgtggatttcagagtcttacacatcttgacttgtctgatagtaacttagaaggtgaaattccaactcaaatctctcacctatccaaa |
42130621 |
T |
 |
| Q |
387 |
ttacaatcacttcatctc |
404 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
42130620 |
ttacaatcacttcatctc |
42130603 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 138; E-Value: 5e-72
Query Start/End: Original strand, 87 - 404
Target Start/End: Original strand, 41711694 - 41712011
Alignment:
| Q |
87 |
aaaacagcaacatggaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggctgtg |
186 |
Q |
| |
|
|||||| ||||||||||||||||||||||||| ||||||||| |||||||| ||||||||| || ||||| |||| ||| || ||||||||||||| |
|
|
| T |
41711694 |
aaaacaacaacatggaaaaatgagactgattgttgctcatggcccggtgtcacatgtgacaccgtctatggtcgcgtggttggcctcaaccttggctgtg |
41711793 |
T |
 |
| Q |
187 |
aaggtcttcaaggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctggctcttattt |
286 |
Q |
| |
|
| || ||||||||||||||| |||||| | ||| ||||||||||||| | || | |||| |||||| |||||| ||||| |||||||| ||| |||| |
|
|
| T |
41711794 |
atggccttcaaggtatattccatcctaataatactcttttccatcttgttcatctccaaacactcaacctttcttacaatgatttctcttactcccattt |
41711893 |
T |
 |
| Q |
287 |
tcattcaaagtttggtgggtttttgagtctcacacatcttgacttgtctcgtagtttctttaaaggtgaaattccaactcaaatctcacacctttgcaaa |
386 |
Q |
| |
|
|||||| ||||||||| ||||||||||||| ||||||||||| ||||| ||||| |||| ||||||||||||||| ||||||||||||||| | |||| |
|
|
| T |
41711894 |
tcattctaagtttggtcggtttttgagtcttgcacatcttgacatgtcttatagttactttgaaggtgaaattccaattcaaatctcacacctctccaaa |
41711993 |
T |
 |
| Q |
387 |
ttacaatcacttcatctc |
404 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
41711994 |
ttacaatcacttcatctc |
41712011 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 85 - 403
Target Start/End: Original strand, 34230708 - 34231038
Alignment:
| Q |
85 |
tgaaaacagcaacatggaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggctg |
184 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||||| |||| || ||||||||||| |
|
|
| T |
34230708 |
tgaaaacagcaacatggaaaaatgggactgattgctgctcatggcatggtgtcacgtgtgacaccgtatctggtcacgtcattggccttaaccttggctg |
34230807 |
T |
 |
| Q |
185 |
tgaaggtcttcaaggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaat------------aatttc |
272 |
Q |
| |
|
|||||| ||||||||||| || |||||| ||||||||||||||||||||| | |||||| ||||| ||||| |||||| ||||| |
|
|
| T |
34230808 |
tgaaggctttcaaggtatactccatcctaatagtacccttttccatcttgctcaccttcaaatgctcaacctttcgaacaattatttctctaacgatttc |
34230907 |
T |
 |
| Q |
273 |
tctggctcttattttcattcaaagtttggtgggtttttgagtctcacacatcttgacttgtctcgtagtttctttaaaggtgaaattccaactcaaatct |
372 |
Q |
| |
|
|||||||| |||||||||| |||||||| |||||| ||||||| |||||||| ||||||||| | |||||||| ||| ||||||||| ||||||||| |
|
|
| T |
34230908 |
tctggctcccattttcattctaagtttggcgggtttatgagtcttacacatctcgacttgtcttcttgtttctttcaagatgaaattccttctcaaatct |
34231007 |
T |
 |
| Q |
373 |
cacacctttgcaaattacaatcacttcatct |
403 |
Q |
| |
|
| |||||| ||||||||||||||||||||| |
|
|
| T |
34231008 |
cggacctttccaaattacaatcacttcatct |
34231038 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 85 - 403
Target Start/End: Original strand, 34238763 - 34239081
Alignment:
| Q |
85 |
tgaaaacagcaacatggaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggctg |
184 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||| | |||||||||| |||| || |||||||| || |
|
|
| T |
34238763 |
tgaaaacagcaacatggaaaaatgggactgattgctgctcatggcatggtgtcacgtgtgacaccgtatctggtcacgtcattggccttaaccttggttg |
34238862 |
T |
 |
| Q |
185 |
tgaaggtcttcaaggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctggctcttat |
284 |
Q |
| |
|
|||||| ||||||||||| || |||||| |||||||||||| || ||| | || | |||| |||||| |||||||||||| ||||| ||| || ||| |
|
|
| T |
34238863 |
tgaaggctttcaaggtatactccatcctaatagtacccttttcaatattgttcatctccaaacactcaacctttctaacaatggtttctatggttcctat |
34238962 |
T |
 |
| Q |
285 |
tttcattcaaagtttggtgggtttttgagtctcacacatcttgacttgtctcgtagtttctttaaaggtgaaattccaactcaaatctcacacctttgca |
384 |
Q |
| |
|
||| |||| |||||||| ||||| |||||| |||||||||||||||||| || | || ||||||||||| ||||||||||| |||||| || |
|
|
| T |
34238963 |
tttgattctaagtttggcaggtttacgagtcttacacatcttgacttgtctaatactcatgttggcggtgaaattccttctcaaatctcatacctttcca |
34239062 |
T |
 |
| Q |
385 |
aattacaatcacttcatct |
403 |
Q |
| |
|
||||||||||||||||||| |
|
|
| T |
34239063 |
aattacaatcacttcatct |
34239081 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 87 - 393
Target Start/End: Complemental strand, 42119097 - 42118787
Alignment:
| Q |
87 |
aaaacagcaacatggaaaaatgagactgattgctgctcat---gggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggct |
183 |
Q |
| |
|
||||| |||||||||||||||| ||||||||||||||||| || |||||||| |||||| || || ||||||||||||||| || |||||||||| |
|
|
| T |
42119097 |
aaaactgcaacatggaaaaatgggactgattgctgctcatcatggcatggtgtcgcgtgtgtcagagtctctggtcacgtgattggtctcaaccttggct |
42118998 |
T |
 |
| Q |
184 |
gtgaaggtcttcaaggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctggctctta |
283 |
Q |
| |
|
| || | ||| |||| ||| |||||||| ||||||||||||||||| | || | |||| ||| || ||| | |||||||||||| | ||| |
|
|
| T |
42118997 |
tttaacgccttactggtaaattacatcctaacaatacccttttccatcttgttcatctccaaacactaaaccttgcatccaataatttctccgcttctcg |
42118898 |
T |
 |
| Q |
284 |
ttttcattcaaagtttggtgggtttttgagtctcacacatcttgacttgtctcgtag-tttctttaaaggtgaaattccaactcaaatctcacacctttg |
382 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||| | | |
|
|
| T |
42118897 |
ttttcattctaagtttggtggttttttgagtcttacacatcttgacttgtctcatagttttctttaaaggtgaaattccaactcaaatctcacacttatc |
42118798 |
T |
 |
| Q |
383 |
caaattacaat |
393 |
Q |
| |
|
||||||||||| |
|
|
| T |
42118797 |
caaattacaat |
42118787 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 54; E-Value: 7e-22
Query Start/End: Original strand, 86 - 335
Target Start/End: Original strand, 41569923 - 41570172
Alignment:
| Q |
86 |
gaaaacagcaacatggaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggctgt |
185 |
Q |
| |
|
||||||| |||||||||||| |||||| |||| || |||||| ||||||||||||| ||| | || |||||| |||||||| || ||||||||||| |
|
|
| T |
41569923 |
gaaaacatcaacatggaaaattgagacaaattgttgttcatggcatggtgtcacgtgcgacgctgtctctggtcgcgtgattggtctcgaccttggctgt |
41570022 |
T |
 |
| Q |
186 |
gaaggtcttcaaggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctggctcttatt |
285 |
Q |
| |
|
||| | |||||||||| | | |||||||| || ||||| ||||||||| || | ||| |||||| |||||| ||||| |||||| ||| ||| |
|
|
| T |
41570023 |
gaatgccttcaaggtaaaatttatcctaacaacactctttttcatcttgctcatctccaatcactcaacctttctcacaatgatttcttcaactccaatt |
41570122 |
T |
 |
| Q |
286 |
ttcattcaaagtttggtgggtttttgagtctcacacatcttgacttgtct |
335 |
Q |
| |
|
| ||||| |||||||||| ||| |||||| |||||||||||||||||| |
|
|
| T |
41570123 |
tgcattctcagtttggtggatttaagagtcttacacatcttgacttgtct |
41570172 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 42130986 - 42130948
Alignment:
| Q |
3 |
agctctgctttgcttcatttcaagtcatccttcattata |
41 |
Q |
| |
|
||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
42130986 |
agctctgctttgcttcagttcaagtcatccttcattata |
42130948 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 126 - 178
Target Start/End: Original strand, 37391642 - 37391694
Alignment:
| Q |
126 |
tgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaacct |
178 |
Q |
| |
|
||||||||||||||||| |||||||| | | |||||||||||||||| |||| |
|
|
| T |
37391642 |
tgggatggtgtcacgtgcgacaccatgtcagatcacgtgattgaactagacct |
37391694 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 191; Significance: 1e-103; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 1 - 403
Target Start/End: Original strand, 25520850 - 25521246
Alignment:
| Q |
1 |
agagctctgctttgcttcatttcaagtcatccttcattataaattctgaatatgctcattatggttgtgatgaattttctcttttgaaaacagcaacatg |
100 |
Q |
| |
|
||||||||||| ||||||| || || || ||||||| |||||||||||||| | || ||| ||||||||||| ||||| |||||||||||||||| |
|
|
| T |
25520850 |
agagctctgctctgcttcagtttaaatcctccttcactataaattctgaatcttct---tatccttgtgatgaat---ctcttctgaaaacagcaacatg |
25520943 |
T |
 |
| Q |
101 |
gaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggctgtgaaggtcttcaaggt |
200 |
Q |
| |
|
|||| ||| ||||||||||||||||||| |||||||||| || ||||||| ||||| |||||||| || ||||||||||||||||| || |||||| |
|
|
| T |
25520944 |
gaaatatgggactgattgctgctcatggcatggtgtcacatgcgacaccacttttggtcgcgtgattggcctcaaccttggctgtgaaggcctccaaggt |
25521043 |
T |
 |
| Q |
201 |
atattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctggctcttattttcattcaaagtttg |
300 |
Q |
| |
|
|||||| |||||| ||||| ||||||||||||||| |||||||||||||||| |||||| ||||| ||||| ||||||| |||||||| | ||||||| |
|
|
| T |
25521044 |
atattccatcctaatagtactcttttccatcttgctcatattcaaaaactcaacctttcttacaatgatttcactggctcccattttcatgctaagtttg |
25521143 |
T |
 |
| Q |
301 |
gtgggtttttgagtctcacacatcttgacttgtctcgtagtttctttaaaggtgaaattccaactcaaatctcacacctttgcaaattacaatcacttca |
400 |
Q |
| |
|
|||||||| |||||| ||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
25521144 |
gtgggtttcagagtcttacacatctttacttgtctggtagtttctttaaaggtaaaattccaactcaaatctcacacctttccaaattacaatcacttca |
25521243 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 132; Significance: 2e-68; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 89 - 404
Target Start/End: Complemental strand, 11120467 - 11120152
Alignment:
| Q |
89 |
aacagcaacatggaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggctgtgaa |
188 |
Q |
| |
|
|||| ||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||| |||||| |||||||| || || |||||||||||| |
|
|
| T |
11120467 |
aacaacaacatggaaaaatgggactgattgctgctcatggaatggtgtcacgtgcgacaccatctctggtcgcgtgattggcctcaatcttggctgtgaa |
11120368 |
T |
 |
| Q |
189 |
ggtcttcaaggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctggctcttattttc |
288 |
Q |
| |
|
||||||||||| ||||| ||| || ||||||||||||||||||| | || | |||| |||||| ||| ||||||||||||| |||||| ||||| |
|
|
| T |
11120367 |
ggtcttcaaggcatattacatccgaatagtacccttttccatcttgttcatctccaaacactcaaccttgtatacaataatttctccggctctcgttttc |
11120268 |
T |
 |
| Q |
289 |
attcaaagtttggtgggtttttgagtctcacacatcttgacttgtctcgtagtttctttaaaggtgaaattccaactcaaatctcacacctttgcaaatt |
388 |
Q |
| |
|
|||| ||||||||||||||| |||||| ||||||||| |||||||| |||| | || | |||||||||||||||||||||||| | |||| |||||| |
|
|
| T |
11120267 |
attctaagtttggtgggtttcagagtcttacacatctttacttgtcttatagtaacatttatggtgaaattccaactcaaatctcatatctttccaaatt |
11120168 |
T |
 |
| Q |
389 |
acaatcacttcatctc |
404 |
Q |
| |
|
|||||| ||| ||||| |
|
|
| T |
11120167 |
acaatccctttatctc |
11120152 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 130; Significance: 3e-67; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 87 - 404
Target Start/End: Complemental strand, 12250516 - 12250199
Alignment:
| Q |
87 |
aaaacagcaacatggaaaaatgagactgattgctgctcatgggatggtgtcacgtgtgacaccatcactggtcacgtgattgaactaaaccttggctgtg |
186 |
Q |
| |
|
||||||||||||||| |||||| ||||||||||||||||||| |||||||||| |||||||| ||| |||||| ||||||| || |||||||| || |
|
|
| T |
12250516 |
aaaacagcaacatggcaaaatgggactgattgctgctcatggcatggtgtcacatgtgacacaatctatggtcatgtgattggcctcgaccttggcgatg |
12250417 |
T |
 |
| Q |
187 |
aaggtcttcaaggtatattcagtcctaacagtacccttttccatcttgcttatattcaaaaactcaatctttctaacaataatttctctggctcttattt |
286 |
Q |
| |
|
|||| ||| | |||||||| ||||| |||||||||||| |||||||| || | |||| |||||| |||||| |||| ||||||| ||| |||| |
|
|
| T |
12250416 |
aaggccttgatggtatattacaacctaatagtacccttttcgatcttgctcatctccaaacactcaacctttcttccaatgatttctcaaactcccattt |
12250317 |
T |
 |
| Q |
287 |
tcattcaaagtttggtgggtttttgagtctcacacatcttgacttgtctcgtagtttctttaaaggtgaaattccaactcaaatctcacacctttgcaaa |
386 |
Q |
| |
|
|||||| ||||||||||| || || | ||| |||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| |||| |
|
|
| T |
12250316 |
tcattctaagtttggtggattctttaatcttacacatcttgacttgtctaatagtttctttaaaggtgaagttccaactcaaatctcacacctttccaaa |
12250217 |
T |
 |
| Q |
387 |
ttacaatcacttcatctc |
404 |
Q |
| |
|
||| |||||||||||||| |
|
|
| T |
12250216 |
ttagaatcacttcatctc |
12250199 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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