View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7727_low_55 (Length: 207)
Name: NF7727_low_55
Description: NF7727
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7727_low_55 |
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Alignment Details
Target: chr7 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 22 - 70
Target Start/End: Original strand, 31261465 - 31261513
Alignment:
| Q |
22 |
tgaatgagttttataattaaatttattgaaataagaaaaagaacaatac |
70 |
Q |
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| T |
31261465 |
tgaatgagttttatcattaaatttattgaaataaaaaaaagaacaatac |
31261513 |
T |
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Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 150 - 193
Target Start/End: Original strand, 31261593 - 31261636
Alignment:
| Q |
150 |
catcacatcactcaatcacaacaagtgcactctttctctctctg |
193 |
Q |
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| T |
31261593 |
catcacatcactcaatcacaacaagtgccctctttctctctctg |
31261636 |
T |
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