View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7728_low_13 (Length: 297)

Name: NF7728_low_13
Description: NF7728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7728_low_13
NF7728_low_13
[»] chr3 (5 HSPs)
chr3 (19-164)||(45517383-45517527)
chr3 (165-213)||(35432221-35432269)
chr3 (165-213)||(44406197-44406245)
chr3 (195-244)||(52398353-52398402)
chr3 (165-213)||(7359842-7359890)
[»] chr2 (17 HSPs)
chr2 (19-164)||(19637469-19637613)
chr2 (19-164)||(19836062-19836206)
chr2 (165-271)||(8536826-8536934)
chr2 (183-271)||(8536155-8536245)
chr2 (202-271)||(42369680-42369751)
chr2 (165-212)||(26893482-26893529)
chr2 (165-212)||(26898921-26898968)
chr2 (165-223)||(6852799-6852857)
chr2 (195-271)||(42370890-42370968)
chr2 (164-267)||(26487789-26487894)
chr2 (165-213)||(6851912-6851960)
chr2 (195-271)||(4976445-4976523)
chr2 (195-271)||(4994352-4994430)
chr2 (195-245)||(4975726-4975776)
chr2 (195-228)||(36390987-36391020)
chr2 (192-228)||(19521368-19521404)
chr2 (199-231)||(36391654-36391686)
[»] chr8 (12 HSPs)
chr8 (165-271)||(33801499-33801607)
chr8 (165-271)||(33802313-33802421)
chr8 (165-271)||(38686303-38686411)
chr8 (170-271)||(38686995-38687098)
chr8 (170-241)||(32551080-32551151)
chr8 (195-271)||(39257664-39257742)
chr8 (195-245)||(43971308-43971358)
chr8 (195-269)||(12349997-12350073)
chr8 (195-269)||(43972028-43972104)
chr8 (165-213)||(42638148-42638196)
chr8 (190-269)||(12350596-12350677)
chr8 (195-228)||(40450971-40451004)
[»] chr4 (10 HSPs)
chr4 (165-271)||(53665026-53665134)
chr4 (169-271)||(50710357-50710461)
chr4 (165-271)||(53664212-53664320)
chr4 (165-223)||(20681722-20681780)
chr4 (190-266)||(6246809-6246887)
chr4 (212-271)||(50709706-50709767)
chr4 (165-213)||(23574617-23574665)
chr4 (195-234)||(232028-232067)
chr4 (195-267)||(6680286-6680360)
chr4 (164-213)||(55511901-55511950)
[»] chr1 (10 HSPs)
chr1 (165-267)||(38618230-38618334)
chr1 (165-213)||(50354996-50355044)
chr1 (163-213)||(24976719-24976769)
chr1 (195-269)||(31788218-31788294)
chr1 (163-213)||(29334947-29334997)
chr1 (195-269)||(11469111-11469187)
chr1 (195-269)||(14925284-14925360)
chr1 (165-213)||(51610221-51610269)
chr1 (165-213)||(51976264-51976312)
chr1 (195-269)||(14924704-14924780)
[»] chr7 (9 HSPs)
chr7 (199-270)||(46757458-46757531)
chr7 (165-213)||(34852557-34852605)
chr7 (195-266)||(12732277-12732350)
chr7 (165-205)||(42344222-42344262)
chr7 (165-213)||(46814247-46814295)
chr7 (165-213)||(5004188-5004236)
chr7 (165-213)||(30916496-30916544)
chr7 (195-243)||(32548643-32548691)
chr7 (165-213)||(34853334-34853382)
[»] chr5 (6 HSPs)
chr5 (165-223)||(43589152-43589210)
chr5 (165-213)||(42993200-42993248)
chr5 (167-213)||(18153434-18153480)
chr5 (190-269)||(4554682-4554763)
chr5 (164-238)||(7495232-7495306)
chr5 (192-234)||(16690369-16690411)
[»] scaffold0189 (1 HSPs)
scaffold0189 (195-269)||(12801-12877)
[»] chr6 (4 HSPs)
chr6 (162-206)||(34716162-34716206)
chr6 (165-206)||(10607351-10607392)
chr6 (165-213)||(19063660-19063708)
chr6 (165-213)||(20687464-20687512)
[»] scaffold0129 (1 HSPs)
scaffold0129 (195-231)||(43200-43236)


Alignment Details
Target: chr3 (Bit Score: 134; Significance: 9e-70; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 19 - 164
Target Start/End: Original strand, 45517383 - 45517527
Alignment:
Q  19 agagagagacttcaaaggttgtgtccatggatacttactttaatgaatgaagcaaaccactcgcaaaaatgtatatattacgtgcaacaccaccctctgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  45517383 agagagagacttcaaaggttgtgtccatggatacttactttaatgaacgaagcaaac-actcgcaaaaatgtatatattacgtgcaacaccaccctctgg 45517481  T
Q  119 ccgtgcttggggttcaggcttgagttgagttaaatgattcttttat 164  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  45517482 ccgtgcttggggttcaggcttgagttgagttaaatgattcttttat 45517527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 35432269 - 35432221
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||    
T  35432269 ggtggcatttagggtgggtagaaggaattctttcccaccatggaaaagt 35432221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 44406197 - 44406245
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||| | ||||||||||||||||||| |||||    
T  44406197 ggtggcatttagggtgggtaggaagaattctttcccaccatggaaaagt 44406245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 244
Target Start/End: Original strand, 52398353 - 52398402
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaaca 244  Q
    ||||||||||||| ||||||||| |||||||||| || || |||||||||    
T  52398353 tttcccaccatggaaaagtaaattttaaccattagattaaatagagaaca 52398402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 7359890 - 7359842
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||  |||||  ||||||||||||||||||||    
T  7359890 ggtggcatttagggtgggtaagaggaagactttcccaccatgggaaagt 7359842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 130; Significance: 2e-67; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 19637613 - 19637469
Alignment:
Q  19 agagagagacttcaaaggttgtgtccatggatacttactttaatgaatgaagcaaaccactcgcaaaaatgtatatattacgtgcaacaccaccctctgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19637613 agagagagacttcaaaggttgtgtccatggatacttactttaatgaacgaagcaaac-actcgcaaaaatgtatatattacgtgcaacaccaccctctgg 19637515  T
Q  119 ccgtgcttggggttcaggcttgagttgagttaaatgattcttttat 164  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  19637514 ccgtgcttggggttcaggcttgagttgagttagatgattcttttat 19637469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 19 - 164
Target Start/End: Complemental strand, 19836206 - 19836062
Alignment:
Q  19 agagagagacttcaaaggttgtgtccatggatacttactttaatgaatgaagcaaaccactcgcaaaaatgtatatattacgtgcaacaccaccctctgg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19836206 agagagagacttcaaaggttgtgtccatggatacttactttaatgaacgaagcaaac-actcgcaaaaatgtatatattacgtgcaacaccaccctctgg 19836108  T
Q  119 ccgtgcttggggttcaggcttgagttgagttaaatgattcttttat 164  Q
    |||||||||||||||||||||||||||||||| |||||||||||||    
T  19836107 ccgtgcttggggttcaggcttgagttgagttagatgattcttttat 19836062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 165 - 271
Target Start/End: Complemental strand, 8536934 - 8536826
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatgg--ttatcatagacactc 262  Q
    |||||||||||||||| |||||||||||||||||| ||||||| ||||||||| || ||||||| ||||||||||||||||||  |||||||||||||||    
T  8536934 ggtggcatttagggtgggtagaaggaattctttcctaccatggaaaagtaaatgttgaccattagataaagtagagaacatggttttatcatagacactc 8536835  T
Q  263 aacaccaaa 271  Q
    |||||||||    
T  8536834 aacaccaaa 8536826  T

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Target: chr2; HSP #4
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 183 - 271
Target Start/End: Original strand, 8536155 - 8536245
Alignment:
Q  183 tagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatg--gttatcatagacactcaacaccaaa 271  Q
    ||||||||||||||| |||||||||||||||||||||| || |||| |||||||||||||||||   ||||||||||||||||||| ||||    
T  8536155 tagaaggaattcttttccaccatgggaaagtaaatattgacgattagataaagtagagaacatgattttatcatagacactcaacatcaaa 8536245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 202 - 271
Target Start/End: Original strand, 42369680 - 42369751
Alignment:
Q  202 ccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaacaccaaa 271  Q
    |||||||||||||||||||| |||||| ||||||||||||||||    ||||||||||||||||||||||||    
T  42369680 ccatgggaaagtaaatattagccattagataaagtagagaacataattttatcatagacactcaacaccaaa 42369751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 26893482 - 26893529
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaag 212  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26893482 ggtggcatttagggtgggtagaaggaattctttcccaccatgggaaag 26893529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 165 - 212
Target Start/End: Original strand, 26898921 - 26898968
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaag 212  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||    
T  26898921 ggtggcatttagggtgggtagaaggaattctttcccaccatgggaaag 26898968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 6852857 - 6852799
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaac 223  Q
    |||||||||||||||| |||| ||||||||||||||||||| ||||||||||| |||||    
T  6852857 ggtggcatttagggtgggtaggaggaattctttcccaccataggaaagtaaattttaac 6852799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 42370968 - 42370890
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatgg--ttatcatagacactcaacaccaaa 271  Q
    ||||||||||||||||||||||||||  |||||| ||||||| ||||| || |  ||||||||||||||| ||||||||    
T  42370968 tttcccaccatgggaaagtaaatattggccattagataaagtggagaatatagttttatcatagacactcgacaccaaa 42370890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 267
Target Start/End: Complemental strand, 26487894 - 26487789
Alignment:
Q  164 tggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagaga--acatggttatcatagacact 261  Q
    ||||||||||||||||| |||| ||||||||||||| |||||| |||||| ||  || ||||||| || |||||| ||  ||||  ||||||||||| ||    
T  26487894 tggtggcatttagggtgggtaggaggaattctttcctaccatgagaaagttaagcttgaccattagattaagtagtgaccacattcttatcatagactct 26487795  T
Q  262 caacac 267  Q
    ||||||    
T  26487794 caacac 26487789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 6851912 - 6851960
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||| ||||||||||||||| |||||||||||    
T  6851912 ggtggcatttagggtgggtaggaggaattctttcccatcatgggaaagt 6851960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 4976523 - 4976445
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatggttat--catagacactcaacaccaaa 271  Q
    |||||||| |||||||||| ||| |||||||||| ||||| ||||||||||  || |  ||||||||||||||||||||    
T  4976523 tttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacaccaaa 4976445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 271
Target Start/End: Complemental strand, 4994430 - 4994352
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatggttat--catagacactcaacaccaaa 271  Q
    |||||||| |||||||||| ||| |||||||||| ||||| ||||||||||  || |  ||||||||||||||||||||    
T  4994430 tttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacaccaaa 4994352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 4975726 - 4975776
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat 245  Q
    ||||||||||||| ||||  ||| || ||||||||||||||||||||||||    
T  4975726 tttcccaccatggaaaagctaattttgaccattaaataaagtagagaacat 4975776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 228
Target Start/End: Original strand, 36390987 - 36391020
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccatta 228  Q
    ||||||||||||||||||||||| ||||||||||    
T  36390987 tttcccaccatgggaaagtaaattttaaccatta 36391020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 192 - 228
Target Start/End: Original strand, 19521368 - 19521404
Alignment:
Q  192 ttctttcccaccatgggaaagtaaatattaaccatta 228  Q
    |||||||||| ||||||||||||||| ||||||||||    
T  19521368 ttctttcccatcatgggaaagtaaatcttaaccatta 19521404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 199 - 231
Target Start/End: Complemental strand, 36391686 - 36391654
Alignment:
Q  199 ccaccatgggaaagtaaatattaaccattaaat 231  Q
    ||||||||||||||||||| |||||||||||||    
T  36391686 ccaccatgggaaagtaaattttaaccattaaat 36391654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 86; Significance: 4e-41; HSPs: 12)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 33801499 - 33801607
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatgg--ttatcatagacactc 262  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  33801499 ggtggcatttagggtgggtagaaggaattctttcccaccatggaaaagtaaatattgaccattaaataaagtagagaacatggttttatcatagacactc 33801598  T
Q  263 aacaccaaa 271  Q
    |||||||||    
T  33801599 aacaccaaa 33801607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 165 - 271
Target Start/End: Complemental strand, 33802421 - 33802313
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatgg--ttatcatagacactc 262  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||  |||||||||||||||    
T  33802421 ggtggcatttagggtgggtagaaggaattctttcccaccatgggaaagtaaatattgaccattaaataaaatagagaacatggttttatcatagacactc 33802322  T
Q  263 aacaccaaa 271  Q
    |||| ||||    
T  33802321 aacatcaaa 33802313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 38686303 - 38686411
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatgg--ttatcatagacactc 262  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||| ||||||||||||||||||  |||||||||||||||    
T  38686303 ggtggcatttagggtgggtagaaggaattcttttccaccatgggaaagtaaatattgaccattagataaagtagagaacatggttttatcatagacactc 38686402  T
Q  263 aacaccaaa 271  Q
    |||||||||    
T  38686403 aacaccaaa 38686411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 38687098 - 38686995
Alignment:
Q  170 catttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatg--gttatcatagacactcaacac 267  Q
    ||||||||||| ||||||||||||||||||||| ||||||||||||||||| | ||||| |||||||||||||||||   |||||||||||||||||||     
T  38687098 catttagggtgggtagaaggaattctttcccacaatgggaaagtaaatattgatcattagataaagtagagaacatgattttatcatagacactcaacat 38686999  T
Q  268 caaa 271  Q
    ||||    
T  38686998 caaa 38686995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 170 - 241
Target Start/End: Complemental strand, 32551151 - 32551080
Alignment:
Q  170 catttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagaga 241  Q
    ||||||||||| |||||||||||||||||||| ||| |||||||||||||| ||||||| ||||| ||||||    
T  32551151 catttagggtgggtagaaggaattctttcccatcataggaaagtaaatattgaccattagataaactagaga 32551080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 195 - 271
Target Start/End: Original strand, 39257664 - 39257742
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaacaccaaa 271  Q
    ||||||||||||||||||  ||| || ||||||||||||||||||||||||    |||||||||| |||||||| ||||    
T  39257664 tttcccaccatgggaaagctaattttgaccattaaataaagtagagaacatacttttatcatagagactcaacatcaaa 39257742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 43971308 - 43971358
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat 245  Q
    ||||||||||||||||||  ||| || ||||||||||||||||||||||||    
T  43971308 tttcccaccatgggaaagctaattttgaccattaaataaagtagagaacat 43971358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 12349997 - 12350073
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatg--gttatcatagacactcaacacca 269  Q
    ||||||||||||| |||   ||| |||||||||| |||||||| ||||||||   ||||||||||||||||||||||    
T  12349997 tttcccaccatggaaaaactaattttaaccattagataaagtaaagaacatgcttttatcatagacactcaacacca 12350073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 43972104 - 43972028
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatggttat--catagacactcaacacca 269  Q
    |||||||| |||||||||| ||| |||||||||| ||||| ||||||||||  || |  ||||||||||||||||||    
T  43972104 tttcccactatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacacca 43972028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 42638148 - 42638196
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||| ||||||||||| |||||||| ||||||    
T  42638148 ggtggcatttagggtgggtaggaggaattcttttccaccatgagaaagt 42638196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 269
Target Start/End: Complemental strand, 12350677 - 12350596
Alignment:
Q  190 aattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaacacca 269  Q
    |||| |||||||||||||||||   ||| || ||||||| |||| |||||||||||    ||||||||||||||||||||||    
T  12350677 aattgtttcccaccatgggaaacctaattttgaccattagataaggtagagaacatacttttatcatagacactcaacacca 12350596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 228
Target Start/End: Complemental strand, 40451004 - 40450971
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccatta 228  Q
    ||||||||||||||||||||||| ||||||||||    
T  40451004 tttcccaccatgggaaagtaaattttaaccatta 40450971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 10)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 165 - 271
Target Start/End: Complemental strand, 53665134 - 53665026
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatgg--ttatcatagacactc 262  Q
    |||||||||||||||| ||||||||||||||||||||||||   |||||||||||| ||||||||||||||||||||||||||  |||||||||||||||    
T  53665134 ggtggcatttagggtgggtagaaggaattctttcccaccataaaaaagtaaatattgaccattaaataaagtagagaacatggttttatcatagacactc 53665035  T
Q  263 aacaccaaa 271  Q
    |||||||||    
T  53665034 aacaccaaa 53665026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 169 - 271
Target Start/End: Complemental strand, 50710461 - 50710357
Alignment:
Q  169 gcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatg--gttatcatagacactcaaca 266  Q
    ||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||   |||||||||||||||||||    
T  50710461 gcatttaaggtgggtagaaggaattctttcccaccatgggaaagtaaatattgaccattagataaagtagagaacatgaatttatcatagacactcaaca 50710362  T
Q  267 ccaaa 271  Q
    |||||    
T  50710361 ccaaa 50710357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 165 - 271
Target Start/End: Original strand, 53664212 - 53664320
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatgg--ttatcatagacactc 262  Q
    ||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||  |||||||||||||||    
T  53664212 ggtggtatttagggtgggtagaaggaattctttcccaccatgggaaagtaaatattgaccattagataaaatagagaacatggttttatcatagacactc 53664311  T
Q  263 aacaccaaa 271  Q
    |||| ||||    
T  53664312 aacatcaaa 53664320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 165 - 223
Target Start/End: Original strand, 20681722 - 20681780
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaac 223  Q
    |||||||||||||||| |||| |||||||||||||||| |||||||||||||| |||||    
T  20681722 ggtggcatttagggtgggtaggaggaattctttcccactatgggaaagtaaattttaac 20681780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 190 - 266
Target Start/End: Original strand, 6246809 - 6246887
Alignment:
Q  190 aattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaaca 266  Q
    |||| ||||||||||||||||||| ||| || ||||||| |||| |||||||||||    |||||||||||||||||||    
T  6246809 aattgtttcccaccatgggaaagttaattttgaccattagataaggtagagaacatacttttatcatagacactcaaca 6246887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 212 - 271
Target Start/End: Original strand, 50709706 - 50709767
Alignment:
Q  212 gtaaatattaaccattaaataaagtagagaacatggtt--atcatagacactcaacaccaaa 271  Q
    ||||||||| || |||| |||||||||||||||| |||  ||||||||||||||||||||||    
T  50709706 gtaaatattgactattagataaagtagagaacatagttttatcatagacactcaacaccaaa 50709767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 23574665 - 23574617
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    ||||||||||||||||  ||| ||||||||||||||||||||| |||||    
T  23574665 ggtggcatttagggtggataggaggaattctttcccaccatggaaaagt 23574617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 234
Target Start/End: Complemental strand, 232067 - 232028
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaa 234  Q
    ||||||||||||||||||||||| |||||||||| |||||    
T  232067 tttcccaccatgggaaagtaaattttaaccattagataaa 232028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 195 - 267
Target Start/End: Complemental strand, 6680360 - 6680286
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatgg--ttatcatagacactcaacac 267  Q
    |||| ||||||||||||||||||||| ||||||| || ||||| ||||||| |  ||||||||||  ||||||||    
T  6680360 tttctcaccatgggaaagtaaatattgaccattagattaagtaaagaacatagttttatcatagattctcaacac 6680286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 55511901 - 55511950
Alignment:
Q  164 tggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    ||||||||||||||||  |||| |||||| |||||||||||| |||||||    
T  55511901 tggtggcatttagggtaggtaggaggaatactttcccaccataggaaagt 55511950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 46; Significance: 3e-17; HSPs: 10)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 165 - 267
Target Start/End: Original strand, 38618230 - 38618334
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtagaga--acatggttatcatagacactc 262  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||| ||  || ||||||| || |||||| ||  ||||  ||||||||||| |||    
T  38618230 ggtggcatttagggtgggtaggaggaattctttcccaccatgggaaagttaagtttgaccattagattaagtagtgaacacattcttatcatagactctc 38618329  T
Q  263 aacac 267  Q
    |||||    
T  38618330 aacac 38618334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 50355044 - 50354996
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||| |||||||||||||||||||||||||||    
T  50355044 ggtggcatttagggtgggtaggaggaattctttcccaccatgggaaagt 50354996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 24976769 - 24976719
Alignment:
Q  163 atggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||||| |||| ||||||||||| |||||||||||||||    
T  24976769 atggtggcatttagggtgggtaggaggaattcttttccaccatgggaaagt 24976719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 31788294 - 31788218
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaacacca 269  Q
    ||||||||||||||||||| ||| |||||||||| ||||| ||||||||||    ||| ||||||||||||||||||    
T  31788294 tttcccaccatgggaaagttaattttaaccattagataaaatagagaacatacttttaccatagacactcaacacca 31788218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 163 - 213
Target Start/End: Complemental strand, 29334997 - 29334947
Alignment:
Q  163 atggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||| ||||||||||| |||| ||||||| |||||||||||||||||||    
T  29334997 atggtgtcatttagggtgggtaggaggaattatttcccaccatgggaaagt 29334947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 11469111 - 11469187
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaacacca 269  Q
    ||||||||||||||||||  ||| || ||||||| |||| |||||||||||    ||||||||||||||||||||||    
T  11469111 tttcccaccatgggaaagctaattttgaccattagataaggtagagaacatacttttatcatagacactcaacacca 11469187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 14925360 - 14925284
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaacacca 269  Q
    ||||||||||||||||||  ||| || ||||||| ||||| ||||||||||    ||||||||||||||||||||||    
T  14925360 tttcccaccatgggaaagctaattttgaccattagataaactagagaacatacttttatcatagacactcaacacca 14925284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 51610269 - 51610221
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||| ||||||  |||||||||||||||||||    
T  51610269 ggtggcatttagggtgggtaggaggaatattttcccaccatgggaaagt 51610221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 51976264 - 51976312
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||| ||||||||||| ||||||||| |||||    
T  51976264 ggtggcatttagggtgggtaggaggaattcttttccaccatggaaaagt 51976312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 195 - 269
Target Start/End: Original strand, 14924704 - 14924780
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaac--atggttatcatagacactcaacacca 269  Q
    ||||||||||||||||||  ||| || ||| |||||| || ||||||||  ||  ||||||||||||||||||||||    
T  14924704 tttcccaccatgggaaagctaattttgaccgttaaattaaatagagaacatatttttatcatagacactcaacacca 14924780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 199 - 270
Target Start/End: Original strand, 46757458 - 46757531
Alignment:
Q  199 ccaccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaacaccaa 270  Q
    |||||||| ||||||||||||| ||||||| ||||||||||||||||    |||||||||||||||||||||||    
T  46757458 ccaccatgagaaagtaaatattgaccattagataaagtagagaacataattttatcatagacactcaacaccaa 46757531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 34852557 - 34852605
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||||||||||||||| |||||||||||||||    
T  34852557 ggtggcatttagggtgggtagaaggaattcttttccaccatgggaaagt 34852605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 266
Target Start/End: Original strand, 12732277 - 12732350
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacatgg--ttatcatagacactcaaca 266  Q
    |||||||||||||||||||||||||| ||||||| || | ||| ||||||| |  ||||||||||| |||||||    
T  12732277 tttcccaccatgggaaagtaaatattgaccattagatcatgtaaagaacatagttttatcatagactctcaaca 12732350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 205
Target Start/End: Complemental strand, 42344262 - 42344222
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccat 205  Q
    |||||||||||||||| |||| |||||||||||||||||||    
T  42344262 ggtggcatttagggtgggtaggaggaattctttcccaccat 42344222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 46814295 - 46814247
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    ||||| ||||||| || |||| |||||||||||||||||||||||||||    
T  46814295 ggtggtatttaggatgggtaggaggaattctttcccaccatgggaaagt 46814247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 5004188 - 5004236
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||| |||||||| || |||| ||||||||||| |||||||||||||||    
T  5004188 ggtgacatttaggatgggtaggaggaattcttttccaccatgggaaagt 5004236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 30916544 - 30916496
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||| | ||||||||||||| ||||| |||||    
T  30916544 ggtggcatttagggtgggtaggaagaattctttcccatcatggaaaagt 30916496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 243
Target Start/End: Complemental strand, 32548691 - 32548643
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaac 243  Q
    ||||||||||||||||||| ||| ||| |||||| || |||||||||||    
T  32548691 tttcccaccatgggaaagttaatgttagccattagatcaagtagagaac 32548643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 34853382 - 34853334
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||| |||||  |||||||||||| |||||||    
T  34853382 ggtggcatttagggtgggtaggaggaagactttcccaccataggaaagt 34853334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 6)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 165 - 223
Target Start/End: Complemental strand, 43589210 - 43589152
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaac 223  Q
    |||||||||||||||| |||| |||||||||||||||| ||||||||||| || |||||    
T  43589210 ggtggcatttagggtgggtaggaggaattctttcccactatgggaaagtagattttaac 43589152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 42993248 - 42993200
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||| |||||||||||||| ||||||||||| |||||    
T  42993248 ggtggcatttagggtgggtagaaggaattctatcccaccatggaaaagt 42993200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 18153480 - 18153434
Alignment:
Q  167 tggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||| |||| ||||||||||| |||||||||||||||    
T  18153480 tggcatttagggtgggtaggaggaattcttttccaccatgggaaagt 18153434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 190 - 269
Target Start/End: Original strand, 4554682 - 4554763
Alignment:
Q  190 aattctttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaacacca 269  Q
    |||| ||| |||||||| |||||  ||| || ||||||| ||||||||||||||||    ||||||||||||||||||||||    
T  4554682 aattgttttccaccatgagaaagctaattttgaccattagataaagtagagaacatacttttatcatagacactcaacacca 4554763  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 164 - 238
Target Start/End: Complemental strand, 7495306 - 7495232
Alignment:
Q  164 tggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagtaaatattaaccattaaataaagtag 238  Q
    ||||| ||||||||||| ||||  ||||||||||||||||||| |||||| ||  || ||||||| || ||||||    
T  7495306 tggtgacatttagggtgggtagggggaattctttcccaccatgagaaagttaagcttgaccattagattaagtag 7495232  T

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Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 192 - 234
Target Start/End: Complemental strand, 16690411 - 16690369
Alignment:
Q  192 ttctttcccaccatgggaaagtaaatattaaccattaaataaa 234  Q
    |||||| ||||||||||||||||||| |||||||||| |||||    
T  16690411 ttcttttccaccatgggaaagtaaattttaaccattagataaa 16690369  T

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Target: scaffold0189 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 195 - 269
Target Start/End: Complemental strand, 12877 - 12801
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaataaagtagagaacat--ggttatcatagacactcaacacca 269  Q
    ||||||||||||||||||| ||| || ||||||| ||||| ||||||||||    ||||||||||||||||||||||    
T  12877 tttcccaccatgggaaagttaattttgaccattagataaactagagaacatacttttatcatagacactcaacacca 12801  T

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Target: chr6 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 162 - 206
Target Start/End: Original strand, 34716162 - 34716206
Alignment:
Q  162 tatggtggcatttagggtgagtagaaggaattctttcccaccatg 206  Q
    ||||||||||||||||||| ||||| ||||| |||||||||||||    
T  34716162 tatggtggcatttagggtgggtagagggaatactttcccaccatg 34716206  T

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Target: chr6; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 206
Target Start/End: Complemental strand, 10607392 - 10607351
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatg 206  Q
    |||||||||||||||| ||||| ||||| |||||||||||||    
T  10607392 ggtggcatttagggtgggtagagggaatactttcccaccatg 10607351  T

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Target: chr6; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 19063660 - 19063708
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||| ||||| |||| |||||| |||||| |||||||||||||    
T  19063660 ggtggcattttgggtgggtaggaggaatactttccaaccatgggaaagt 19063708  T

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Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Original strand, 20687464 - 20687512
Alignment:
Q  165 ggtggcatttagggtgagtagaaggaattctttcccaccatgggaaagt 213  Q
    |||||||||||||||  |||| |||||| |||||||||||| |||||||    
T  20687464 ggtggcatttagggtaggtaggaggaatactttcccaccataggaaagt 20687512  T

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Target: scaffold0129 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 43236 - 43200
Alignment:
Q  195 tttcccaccatgggaaagtaaatattaaccattaaat 231  Q
    ||||||| ||||||||||||||| |||||||||||||    
T  43236 tttcccatcatgggaaagtaaatcttaaccattaaat 43200  T

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