View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7728_low_15 (Length: 267)

Name: NF7728_low_15
Description: NF7728
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7728_low_15
NF7728_low_15
[»] chr7 (39 HSPs)
chr7 (1-125)||(38505162-38505286)
chr7 (1-125)||(33871778-33871902)
chr7 (1-125)||(23465818-23465942)
chr7 (1-125)||(30081111-30081236)
chr7 (1-90)||(4057999-4058088)
chr7 (1-125)||(15748769-15748891)
chr7 (1-125)||(32650209-32650333)
chr7 (1-58)||(17818425-17818482)
chr7 (1-125)||(16805385-16805509)
chr7 (1-125)||(35264709-35264833)
chr7 (1-125)||(42254107-42254231)
chr7 (1-123)||(36907422-36907544)
chr7 (1-51)||(14676369-14676419)
chr7 (5-59)||(22556588-22556642)
chr7 (1-96)||(13044286-13044382)
chr7 (1-72)||(43348110-43348181)
chr7 (15-73)||(6746451-6746509)
chr7 (1-59)||(38991357-38991415)
chr7 (1-69)||(31055491-31055560)
chr7 (1-50)||(38138070-38138119)
chr7 (1-46)||(45510481-45510526)
chr7 (5-45)||(33406530-33406570)
chr7 (5-60)||(42112841-42112897)
chr7 (1-45)||(48935111-48935155)
chr7 (1-59)||(4787886-4787945)
chr7 (1-75)||(32851721-32851796)
chr7 (1-72)||(42266879-42266949)
chr7 (1-84)||(45940269-45940352)
chr7 (19-85)||(2826106-2826172)
chr7 (1-59)||(12863537-12863595)
chr7 (1-59)||(43230114-43230172)
chr7 (1-51)||(44487227-44487277)
chr7 (3-53)||(46303389-46303439)
chr7 (1-42)||(10591806-10591846)
chr7 (1-54)||(32228907-32228960)
chr7 (18-63)||(41471599-41471644)
chr7 (5-45)||(7667063-7667103)
chr7 (5-45)||(33810110-33810150)
chr7 (1-45)||(46509404-46509448)
[»] chr1 (52 HSPs)
chr1 (1-125)||(36887008-36887132)
chr1 (1-123)||(69870-69992)
chr1 (1-122)||(666415-666537)
chr1 (1-125)||(17760303-17760427)
chr1 (1-125)||(34154156-34154280)
chr1 (1-125)||(37649434-37649558)
chr1 (1-125)||(52067965-52068089)
chr1 (1-72)||(27255338-27255409)
chr1 (1-91)||(5584644-5584734)
chr1 (1-62)||(1278608-1278669)
chr1 (1-125)||(2909256-2909380)
chr1 (38-125)||(14439746-14439833)
chr1 (28-122)||(38795233-38795327)
chr1 (1-63)||(34749895-34749957)
chr1 (6-56)||(45439124-45439174)
chr1 (1-125)||(33579392-33579516)
chr1 (1-49)||(52073352-52073400)
chr1 (1-71)||(32287719-32287789)
chr1 (1-51)||(23800487-23800537)
chr1 (1-59)||(43530182-43530240)
chr1 (2-72)||(50097754-50097824)
chr1 (1-59)||(50587172-50587230)
chr1 (40-125)||(24369081-24369166)
chr1 (1-53)||(13044477-13044528)
chr1 (1-75)||(4952258-4952333)
chr1 (4-59)||(6538129-6538184)
chr1 (1-72)||(41817170-41817241)
chr1 (1-72)||(46001705-46001776)
chr1 (5-60)||(50476671-50476726)
chr1 (5-59)||(20712100-20712153)
chr1 (1-51)||(28848691-28848741)
chr1 (1-51)||(30543255-30543305)
chr1 (1-123)||(37875572-37875694)
chr1 (1-51)||(50162277-50162327)
chr1 (1-125)||(4204597-4204722)
chr1 (1-89)||(33324762-33324851)
chr1 (1-54)||(51303064-51303117)
chr1 (1-72)||(29092224-29092293)
chr1 (1-85)||(34738454-34738538)
chr1 (1-41)||(39886826-39886866)
chr1 (1-52)||(39125332-39125382)
chr1 (1-59)||(49102859-49102915)
chr1 (4-59)||(50598876-50598931)
chr1 (1-51)||(718466-718516)
chr1 (1-59)||(9595700-9595758)
chr1 (1-59)||(17556931-17556989)
chr1 (1-59)||(25561202-25561260)
chr1 (1-59)||(36269882-36269939)
chr1 (1-51)||(41432654-41432704)
chr1 (5-59)||(50247739-50247793)
chr1 (1-50)||(17416611-17416660)
chr1 (1-46)||(26345764-26345809)
[»] chr8 (35 HSPs)
chr8 (173-252)||(13539328-13539407)
chr8 (173-252)||(13685067-13685146)
chr8 (1-125)||(29584313-29584437)
chr8 (1-125)||(34336169-34336293)
chr8 (1-98)||(13369762-13369862)
chr8 (1-124)||(79439-79565)
chr8 (1-116)||(21173685-21173800)
chr8 (1-89)||(8228700-8228788)
chr8 (1-112)||(36837329-36837440)
chr8 (1-123)||(26772473-26772595)
chr8 (17-72)||(43239881-43239936)
chr8 (1-125)||(12506014-12506138)
chr8 (1-57)||(13258625-13258681)
chr8 (1-73)||(37388418-37388490)
chr8 (1-124)||(23932367-23932490)
chr8 (1-59)||(1839704-1839762)
chr8 (1-51)||(15108156-15108206)
chr8 (1-117)||(11742660-11742775)
chr8 (1-72)||(10878656-10878727)
chr8 (5-60)||(43732997-43733052)
chr8 (1-51)||(3394100-3394150)
chr8 (1-91)||(13227849-13227939)
chr8 (1-51)||(13537481-13537531)
chr8 (1-51)||(13627029-13627079)
chr8 (1-59)||(35856414-35856472)
chr8 (10-72)||(41865506-41865568)
chr8 (1-53)||(26753796-26753848)
chr8 (1-71)||(6447542-6447615)
chr8 (1-71)||(10483025-10483093)
chr8 (5-59)||(39194074-39194129)
chr8 (1-51)||(40984968-40985016)
chr8 (1-122)||(6943286-6943408)
chr8 (6-120)||(9054334-9054448)
chr8 (1-59)||(32158904-32158962)
chr8 (25-111)||(4873076-4873166)
[»] chr3 (38 HSPs)
chr3 (1-125)||(3537345-3537469)
chr3 (1-125)||(51686645-51686769)
chr3 (1-75)||(517500-517574)
chr3 (1-122)||(50948345-50948466)
chr3 (1-125)||(5939599-5939723)
chr3 (1-125)||(34280626-34280750)
chr3 (1-117)||(34729165-34729279)
chr3 (1-125)||(48908710-48908834)
chr3 (1-75)||(49183824-49183898)
chr3 (5-122)||(50534928-50535045)
chr3 (1-125)||(53664426-53664551)
chr3 (1-125)||(37673971-37674095)
chr3 (1-125)||(38639718-38639842)
chr3 (1-125)||(44400838-44400962)
chr3 (1-96)||(33900562-33900657)
chr3 (1-51)||(1132827-1132877)
chr3 (1-51)||(4247256-4247306)
chr3 (5-125)||(16883855-16883972)
chr3 (7-85)||(47359457-47359537)
chr3 (1-59)||(3334003-3334061)
chr3 (1-125)||(33944458-33944582)
chr3 (1-54)||(53620360-53620413)
chr3 (1-85)||(25753970-25754054)
chr3 (1-51)||(13638565-13638616)
chr3 (1-51)||(32858969-32859018)
chr3 (1-59)||(46891525-46891583)
chr3 (1-85)||(45570802-45570886)
chr3 (1-40)||(2984030-2984069)
chr3 (1-40)||(31651348-31651387)
chr3 (1-51)||(43273946-43273994)
chr3 (5-64)||(48951922-48951981)
chr3 (5-51)||(15499191-15499237)
chr3 (5-51)||(18257600-18257646)
chr3 (1-59)||(35283226-35283284)
chr3 (1-51)||(50201707-50201757)
chr3 (1-46)||(54877315-54877360)
chr3 (40-96)||(27197425-27197481)
chr3 (3-59)||(36637940-36637996)
[»] chr2 (42 HSPs)
chr2 (1-112)||(1270533-1270645)
chr2 (1-125)||(1364962-1365086)
chr2 (1-125)||(21626264-21626388)
chr2 (1-125)||(13018296-13018420)
chr2 (1-125)||(43572362-43572486)
chr2 (5-116)||(15234699-15234810)
chr2 (1-123)||(40212142-40212264)
chr2 (2-125)||(41099933-41100056)
chr2 (1-125)||(37194406-37194530)
chr2 (1-125)||(11515183-11515307)
chr2 (1-117)||(35549985-35550100)
chr2 (29-116)||(30072272-30072359)
chr2 (1-84)||(34757745-34757828)
chr2 (1-125)||(7367716-7367841)
chr2 (1-125)||(31082940-31083061)
chr2 (1-125)||(15803311-15803435)
chr2 (1-117)||(39205156-39205272)
chr2 (1-59)||(36030932-36030990)
chr2 (5-62)||(16625686-16625742)
chr2 (1-118)||(18590177-18590293)
chr2 (6-63)||(32761166-32761223)
chr2 (2-89)||(28539281-28539369)
chr2 (1-61)||(30523416-30523476)
chr2 (1-40)||(8184028-8184067)
chr2 (1-51)||(32951015-32951066)
chr2 (1-72)||(43190431-43190502)
chr2 (1-51)||(30265251-30265301)
chr2 (1-59)||(43100452-43100510)
chr2 (4-112)||(21835049-21835158)
chr2 (1-85)||(16813762-16813845)
chr2 (1-85)||(16853041-16853124)
chr2 (1-59)||(11522066-11522122)
chr2 (1-64)||(26618484-26618547)
chr2 (5-59)||(29880907-29880961)
chr2 (1-51)||(33206926-33206976)
chr2 (1-51)||(39913412-39913462)
chr2 (1-50)||(4666274-4666323)
chr2 (4-59)||(13767559-13767613)
chr2 (1-57)||(39670068-39670121)
chr2 (1-53)||(12941687-12941739)
chr2 (1-96)||(14385219-14385314)
chr2 (1-123)||(36870378-36870499)
[»] scaffold0119 (2 HSPs)
scaffold0119 (1-117)||(37260-37377)
scaffold0119 (1-112)||(30592-30704)
[»] chr6 (23 HSPs)
chr6 (1-125)||(12779652-12779776)
chr6 (1-125)||(1567420-1567542)
chr6 (1-119)||(24849373-24849492)
chr6 (1-125)||(32719117-32719241)
chr6 (1-123)||(20820354-20820477)
chr6 (1-56)||(33590216-33590271)
chr6 (1-85)||(11179986-11180070)
chr6 (1-89)||(33755178-33755266)
chr6 (1-111)||(16329518-16329627)
chr6 (1-51)||(16361681-16361731)
chr6 (1-71)||(33184305-33184375)
chr6 (4-59)||(6695438-6695493)
chr6 (1-59)||(6687832-6687890)
chr6 (5-59)||(9104830-9104884)
chr6 (1-39)||(13120326-13120364)
chr6 (1-51)||(26683456-26683505)
chr6 (25-125)||(28551725-28551823)
chr6 (1-59)||(8439280-8439337)
chr6 (1-78)||(597000-597077)
chr6 (1-34)||(19477395-19477428)
chr6 (6-54)||(2502213-2502261)
chr6 (1-125)||(6855790-6855913)
chr6 (1-29)||(15986482-15986510)
[»] chr5 (35 HSPs)
chr5 (1-117)||(13569501-13569617)
chr5 (1-125)||(5772548-5772672)
chr5 (1-125)||(35683291-35683415)
chr5 (1-91)||(14569902-14569992)
chr5 (1-123)||(10843173-10843295)
chr5 (1-71)||(3924728-3924798)
chr5 (1-75)||(38568247-38568320)
chr5 (11-125)||(10955507-10955621)
chr5 (1-59)||(8944184-8944243)
chr5 (1-71)||(9096450-9096519)
chr5 (1-95)||(10438115-10438209)
chr5 (1-51)||(17668026-17668076)
chr5 (1-71)||(19389700-19389770)
chr5 (4-59)||(22114847-22114903)
chr5 (1-63)||(1934989-1935049)
chr5 (1-72)||(12656232-12656303)
chr5 (1-51)||(9684683-9684733)
chr5 (1-51)||(35042343-35042393)
chr5 (1-54)||(15917531-15917584)
chr5 (2-59)||(35704752-35704809)
chr5 (1-53)||(4841599-4841651)
chr5 (1-37)||(18675629-18675665)
chr5 (1-85)||(39649710-39649794)
chr5 (1-40)||(27350909-27350948)
chr5 (4-51)||(31632976-31633023)
chr5 (60-122)||(1838851-1838913)
chr5 (1-51)||(28523757-28523807)
chr5 (1-51)||(33682511-33682561)
chr5 (1-50)||(6632787-6632836)
chr5 (5-49)||(1978286-1978330)
chr5 (1-45)||(7398679-7398723)
chr5 (5-45)||(25027065-25027105)
chr5 (7-39)||(31535219-31535251)
chr5 (5-33)||(32750726-32750754)
chr5 (5-45)||(33718324-33718364)
[»] chr4 (44 HSPs)
chr4 (1-125)||(38136652-38136776)
chr4 (1-125)||(29114061-29114185)
chr4 (1-125)||(30198589-30198713)
chr4 (1-111)||(9021073-9021183)
chr4 (1-125)||(33500659-33500784)
chr4 (1-89)||(49667970-49668056)
chr4 (12-125)||(22165584-22165699)
chr4 (2-125)||(41708936-41709059)
chr4 (1-91)||(12708686-12708776)
chr4 (1-74)||(16423052-16423125)
chr4 (1-73)||(20896279-20896351)
chr4 (1-117)||(50494480-50494596)
chr4 (5-62)||(46176819-46176875)
chr4 (1-125)||(37969561-37969683)
chr4 (1-59)||(368196-368255)
chr4 (4-51)||(24662639-24662686)
chr4 (8-59)||(38644632-38644683)
chr4 (1-75)||(8828078-8828152)
chr4 (1-51)||(15451229-15451279)
chr4 (1-59)||(28880130-28880188)
chr4 (6-51)||(42759544-42759589)
chr4 (1-54)||(43793557-43793610)
chr4 (3-59)||(46669828-46669885)
chr4 (1-53)||(28175354-28175406)
chr4 (1-74)||(55510016-55510090)
chr4 (1-72)||(16318756-16318827)
chr4 (1-40)||(25056542-25056581)
chr4 (12-75)||(28880303-28880366)
chr4 (12-59)||(45022421-45022468)
chr4 (1-40)||(52554901-52554940)
chr4 (1-59)||(18397052-18397110)
chr4 (1-59)||(18399740-18399798)
chr4 (1-51)||(41495532-41495582)
chr4 (5-59)||(54206012-54206066)
chr4 (29-122)||(6121430-6121523)
chr4 (44-125)||(35959349-35959430)
chr4 (4-73)||(56118024-56118093)
chr4 (44-123)||(16461547-16461627)
chr4 (1-53)||(25843975-25844026)
chr4 (6-54)||(27143364-27143412)
chr4 (4-51)||(27485154-27485202)
chr4 (4-64)||(30307510-30307570)
chr4 (1-45)||(41844574-41844618)
chr4 (1-49)||(49936641-49936689)
[»] scaffold0248 (1 HSPs)
scaffold0248 (1-125)||(14-138)
[»] scaffold0024 (1 HSPs)
scaffold0024 (1-89)||(44831-44919)
[»] scaffold0388 (1 HSPs)
scaffold0388 (1-75)||(7210-7284)
[»] scaffold0263 (1 HSPs)
scaffold0263 (18-117)||(5811-5909)
[»] scaffold0245 (1 HSPs)
scaffold0245 (1-62)||(4285-4346)
[»] scaffold0229 (1 HSPs)
scaffold0229 (1-62)||(4616-4677)
[»] scaffold0136 (1 HSPs)
scaffold0136 (1-54)||(1912-1965)
[»] scaffold0051 (1 HSPs)
scaffold0051 (1-94)||(3417-3510)
[»] scaffold0053 (1 HSPs)
scaffold0053 (1-125)||(29383-29507)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-85)||(93364-93448)
[»] scaffold0128 (1 HSPs)
scaffold0128 (1-125)||(26519-26644)
[»] scaffold0991 (1 HSPs)
scaffold0991 (1-72)||(445-516)
[»] scaffold0648 (1 HSPs)
scaffold0648 (1-78)||(7300-7382)
[»] scaffold1763 (1 HSPs)
scaffold1763 (1-51)||(496-546)
[»] scaffold0274 (1 HSPs)
scaffold0274 (5-78)||(16075-16153)
[»] scaffold0026 (1 HSPs)
scaffold0026 (1-61)||(82257-82317)


Alignment Details
Target: chr7 (Bit Score: 77; Significance: 8e-36; HSPs: 39)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 38505286 - 38505162
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||||||| || |||||| ||| | |||| |||    
T  38505286 ttaatttatcattctctaaaaaactactcttttaaaaaatttgaaagatttctccattttccctcaaattttccacccctcaaagccttcccttcccctc 38505187  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  38505186 ccctccaaactcccaaacaaagcct 38505162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 33871902 - 33871778
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||| ||||||||||||| |||||||||||||||||| ||||||||||| |||| ||| ||||||||||| || |||||| ||| | |||| |||    
T  33871902 ttaatttattattctctaaaaaactactcttttaaaaaatttaaaagatttctcaattttcccacatattttccacccctcaaagccttcccttcccctc 33871803  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||||||||||||| |||||||    
T  33871802 ccctccaaactcgcaaacaaagcct 33871778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 23465942 - 23465818
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| || ||||||||||||| ||||||||||  |||||| |||  |||||| | | || |||||||||| | |||| |||    
T  23465942 ttaatttatcattctctaaaaaactattcttttaaaaaatgtgaaagattttaccattttcccctatatttccaacccttcaaagtcttcccttcccctc 23465843  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  23465842 ccctccaaactcccaaacaaagcct 23465818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 30081111 - 30081236
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcatt--cctc 98  Q
    |||||||| |||||||||||||| ||||||||||||||| |||||||||||||| ||||  |||||||||||||| || | |||| ||| | ||  ||||    
T  30081111 ttaatttaccattctctaaaaaactactcttttaaaaaaattgaaagatttctcaatttttcctcatattttcca-cccttaaagacttcccttcccctc 30081209  T
Q  99 tctcctccaaactcgcaaataaagcct 125  Q
    || |||| |||||| ||||||||||||    
T  30081210 tcccctctaaactcccaaataaagcct 30081236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 90
Target Start/End: Complemental strand, 4058088 - 4057999
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtcttt 90  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||||||||    
T  4058088 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagtcttt 4057999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 15748891 - 15748769
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||| |||||||||||||| | ||||||||||||||||| |||||||||| ||||  | ||||||||| ||  | |||||| |||||||| || ||    
T  15748891 ttaatttaccattctctaaaaaactgctcttttaaaaaatttgtaagatttctctatttttcttcatattttgca--cctcaaagcctttcatttctttc 15748794  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
      ||||||||||||||| |||||||    
T  15748793 ctctccaaactcgcaaacaaagcct 15748769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 32650333 - 32650209
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| |||||||| ||||| |||| ||||||| || ||||  | ||||||||| || || |||||||||||| || |  ||    
T  32650333 ttaatttatcattctctaaaaaactactctttcaaaaattttgtaagatttatctatttttcttcatattttgcacccctcaaagtctttcctttccttc 32650234  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||| |||||||||||| |||||||    
T  32650233 cccttcaaactcgcaaacaaagcct 32650209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 17818425 - 17818482
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatt 58  Q
    ||||||||||||||||||||||| || ||||||| |||||||||||||||||||||||    
T  17818425 ttaatttatcattctctaaaaaactattcttttagaaaatttgaaagatttctccatt 17818482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 16805509 - 16805385
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| |||||||||||    ||| ||| ||||||| ||||  ||||||||||| || || |||||||||||| || |  ||    
T  16805509 ttaatttatcattctctaaaaaactactcttttaatttttttaaaaaatttctctatttttcctcatattttgcacccctcaaagtctttcttttccttc 16805410  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  16805409 ccctccaaactcccaaacaaagcct 16805385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 35264833 - 35264709
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||| ||||||| |||||||||||    ||||||||||||||| |||| || |||||||||||| || ||||||  |||| |||  |||    
T  35264833 ttaatttatcattctttaaaaaactactcttttaatttttttgaaagatttctctattttccttcatattttccacccctcaaagcatttccttcacctc 35264734  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||  |||| |||||||    
T  35264733 ccctccaaactatcaaacaaagcct 35264709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 42254107 - 42254231
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||| ||||||||||| ||||  | ||||||||| || || |||||| ||||| || |  ||    
T  42254107 ttaatttatcattctctaaaaaactactcttttaaattttttaaaagatttctctatttttcttcatattttacacccctcaaagcctttcctttccttc 42254206  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  42254207 ccctccaaactcccaaacaaagcct 42254231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 36907422 - 36907544
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||| |||||||||||| | ||||||||||| ||||||||||  || ||| | |  |||||||| | ||  |||||||||||||||| |||    
T  36907422 ttaatttatcattatctaaaaaattagtattttaaaaaatgtgaaagattttacctttttctcctatattttcaaccctccaaagtctttcattcccctc 36907521  T
Q  101 tcctccaaactcgcaaataaagc 123  Q
     |||||||| || |||| |||||    
T  36907522 ccctccaaattcccaaacaaagc 36907544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 14676369 - 14676419
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  14676369 ttaatttatcattccctaaaaaattactctttcaaaaaatgtgaaagattt 14676419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 22556642 - 22556588
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||| ||||||||||| |||||||||||||||| ||||||||||||| ||||    
T  22556642 tttatcactctctaaaaaaatactcttttaaaaaatgtgaaagatttctcaattt 22556588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 13044286 - 13044382
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaa-aaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcc 96  Q
    ||||||||||||||||||||||| |||||||||||     |||||| ||||||||||||| | |||||||||| || || || ||| ||||||||||    
T  13044286 ttaatttatcattctctaaaaaactactcttttaattttttttgaaggatttctccattttctctcatatttttcacccctcgaagcctttcattcc 13044382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43348181 - 43348110
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    |||||||||  |||||||||||| ||||||||||||||| |||||||||| ||| ||||  ||| |||||||    
T  43348181 ttaatttattgttctctaaaaaactactcttttaaaaaaattgaaagattactctatttttccttatatttt 43348110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 73
Target Start/End: Complemental strand, 6746509 - 6746451
Alignment:
Q  15 tctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttc 73  Q
    ||||||||| || ||||| |||| ||||||||||||||||||||| ||| |||||||||    
T  6746509 tctaaaaaactaatctttcaaaatatttgaaagatttctccattttcccccatattttc 6746451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 38991415 - 38991357
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||||||   ||||||| ||||||| | ||||||||||||||||    
T  38991415 ttaatttatcattctctaaaaatacactctttgaaaaaatataaaagatttctccattt 38991357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 31055491 - 31055560
Alignment:
Q  1 ttaatttatcattctctaaaaaattactctttta-aaaaatttgaaagatttctccatttcccctcatat 69  Q
    ||||||||||| |||||||||||  ||||||||| |||||| ||||||||||||| |||| |||| ||||    
T  31055491 ttaatttatcactctctaaaaaaacactcttttataaaaatgtgaaagatttctcaattttcccttatat 31055560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 38138070 - 38138119
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatt 50  Q
    ||||||||||||||||||||||| |||||| | ||||||| |||||||||    
T  38138070 ttaatttatcattctctaaaaaaatactctatcaaaaaatgtgaaagatt 38138119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45510481 - 45510526
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaa 46  Q
    |||||||||||||||||||||||||||||||| | ||||| |||||    
T  45510481 ttaatttatcattctctaaaaaattactctttcacaaaatgtgaaa 45510526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 33406570 - 33406530
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaa 45  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  33406570 tttatcattctctaaaaaattattcttttaaaaaatgtgaa 33406530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 42112897 - 42112841
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaa-aaatttgaaagatttctccatttc 60  Q
    |||||||||||||||||||  ||||||| ||| |||| |||||||||||||||||||    
T  42112897 tttatcattctctaaaaaaacactctttcaaagaaatgtgaaagatttctccatttc 42112841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 48935111 - 48935155
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaa 45  Q
    |||||||||||||||||||||||||||| || |||||||| ||||    
T  48935111 ttaatttatcattctctaaaaaattacttttctaaaaaatatgaa 48935155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 4787945 - 4787886
Alignment:
Q  1 ttaatttatcattctctaaaaaa-ttactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| ||||||||||| ||||||||| ||||||| ||||| ||||||| ||||    
T  4787945 ttaatttatcactctctaaaaaaattactctttcaaaaaatgtgaaaaatttctcaattt 4787886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 32851796 - 32851721
Alignment:
Q  1 ttaatttatcattctctaaaaaa-ttactcttttaaaaaatttgaaagatttctccatttcccctcatattttcca 75  Q
    ||||||||||| | ||||||||| || |||||||||||||| ||||  ||||||| ||||||||  ||||||||||    
T  32851796 ttaatttatcactatctaaaaaaattgctcttttaaaaaatgtgaatcatttctctatttccccgtatattttcca 32851721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 42266949 - 42266879
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    |||||||||||||||||||||||||| | ||| ||||||| | ||| |||| | ||||| ||||||||||||    
T  42266949 ttaatttatcattctctaaaaaattattttttcaaaaaatgttaaaaatttat-cattttccctcatatttt 42266879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 84
Target Start/End: Complemental strand, 45940352 - 45940269
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaa 84  Q
    |||||||| |||||||||||||| || |||||||||||| ||  || ||||||| ||||  | ||||||||| || ||||||||    
T  45940352 ttaatttaccattctctaaaaaactattcttttaaaaaaattataaaatttctctatttttcttcatattttgcacccatcaaa 45940269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 85
Target Start/End: Complemental strand, 2826172 - 2826106
Alignment:
Q  19 aaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    ||||| ||||||||||||   ||||||||||||||||||||   ||||||||||||| || ||||||    
T  2826172 aaaaactactcttttaaattttttgaaagatttctccattttttctcatattttccacccttcaaag 2826106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 12863595 - 12863537
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||| ||| |||||||  ||||| ||||||| ||||| ||||||||||||    
T  12863595 ttaatttatcattatctgaaaaattggtctttcaaaaaatgtgaaatatttctccattt 12863537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 43230114 - 43230172
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||  |||||||| |||| ||| ||||||| |||||||||| |||||||    
T  43230114 ttaatttatcatttactaaaaaaatactatttcaaaaaatatgaaagatttatccattt 43230172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 44487277 - 44487227
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||| ||||||||||| |||||| | ||||||| ||||||||||    
T  44487277 ttaatttatcactctctaaaaaaatactctataaaaaaatgtgaaagattt 44487227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 46303389 - 46303439
Alignment:
Q  3 aatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttct 53  Q
    ||||||||||||| |||||||  ||||||| ||||||| ||||||||||||    
T  46303389 aatttatcattctttaaaaaaacactctttcaaaaaatatgaaagatttct 46303439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 10591846 - 10591806
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaattt 42  Q
    |||||||||||||||||| |||| ||||||||||||||||||    
T  10591846 ttaatttatcattctcta-aaaactactcttttaaaaaattt 10591806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 32228907 - 32228960
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctc 54  Q
    ||||||||||| ||||| || || |||||||| ||||||| |||||||||||||    
T  32228907 ttaatttatcactctcttaataaatactctttcaaaaaatgtgaaagatttctc 32228960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 41471599 - 41471644
Alignment:
Q  18 aaaaaattactcttttaaaaaatttgaaagatttctccatttcccc 63  Q
    |||||| |||||||| ||||||| |||||||| |||||||||||||    
T  41471599 aaaaaaatactctttcaaaaaatgtgaaagatctctccatttcccc 41471644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 7667103 - 7667063
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaa 45  Q
    |||||||||||||||||||||| ||||| ||||||| ||||    
T  7667103 tttatcattctctaaaaaattattctttcaaaaaatgtgaa 7667063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Complemental strand, 33810150 - 33810110
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaa 45  Q
    |||||||||||||||||||||| ||||| ||||||| ||||    
T  33810150 tttatcattctctaaaaaattattctttcaaaaaatatgaa 33810110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 46509404 - 46509448
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaa 45  Q
    ||||||||||||||||||||| |||||||| | ||||||| ||||    
T  46509404 ttaatttatcattctctaaaacattactctctaaaaaaatgtgaa 46509448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 52)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 36887008 - 36887132
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||| ||||||||| || |||||||||||| |||| ||     
T  36887008 ttaatttatcattctctaaaaaactacacttttaaaaaatttgaaagatttcttcattttccctcgtattttccacccctcaaagtctttccttcccctt 36887107  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||||||||||||| |||||||    
T  36887108 ccctccaaactcgcaaacaaagcct 36887132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 69870 - 69992
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||| |||||||||||| || || ||||| |||||| ||||||||    
T  69870 ttaatttatcattctctaaaaaactactcttttaaaaaaattgaaagatttcttcattttccctcatatttttcacccctcaaaatctttccttcctctc 69969  T
Q  101 tcctccaaactcgcaaataaagc 123  Q
     |||||||| || |||| |||||    
T  69970 ccctccaaattcacaaacaaagc 69992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 666415 - 666537
Alignment:
Q  1 ttaatttatcattctctaaa-aaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    |||||||||||||||||||| ||| |||||||||||    ||| |||||||||| ||||| ||||||||||||||| || |||||||||||| ||| |||    
T  666415 ttaatttatcattctctaaacaaactactcttttaatttttttaaaagatttcttcattttccctcatattttccacccctcaaagtctttccttcatct 666514  T
Q  100 ctcctccaaactcgcaaataaag 122  Q
      ||| |||||||||||| ||||    
T  666515 tcccttcaaactcgcaaacaaag 666537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 17760427 - 17760303
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||| ||||||| ||||  |||||||| || || || |||||| |||||||| |  ||    
T  17760427 ttaatttatcattctctaaaaaactactcttttaaattttttgaaaaatttctctatttttcctcatatgttgcacccctcaaagcctttcatttccttc 17760328  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||| |||||| ||||||||||||    
T  17760327 ccctctaaactcccaaataaagcct 17760303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 34154280 - 34154156
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||   |||||||||| || || ||||| |||||| || |  ||    
T  34154280 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctattttttctcatattttgcacccctcaaaatctttcctttccttc 34154181  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  34154180 ccctccaaactcccaaacaaagcct 34154156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37649558 - 37649434
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| |||||||||||    ||||||||||||||| ||||  ||||||||||| || || |||||| ||||| || |  ||    
T  37649558 ttaatttatcattctctaaaaaactactcttttaatttttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttcctttccttc 37649459  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  37649458 ccctccaaactcccaaacaaagcct 37649434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 52068089 - 52067965
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||| ||||| || |  ||    
T  52068089 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttcttttccttc 52067990  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||  |||| |||||||    
T  52067989 ccctccaaacttccaaacaaagcct 52067965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 27255338 - 27255409
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||  || ||||||||    
T  27255338 ttaatttatcattctctaaaaaactactcttttaaaaaacttgaaagatttctctatttttccacatatttt 27255409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 5584644 - 5584734
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttc 91  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||  | ||||||||| || || |||||| |||||    
T  5584644 ttaatttaccattctctaaaaaactactcttttaaaaaatttgtaagatttctctatttttcttcatattttgcacccctcaaagcctttc 5584734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 1278608 - 1278669
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttccc 62  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||    
T  1278608 ttaatttatcattctccaaaaaattactcttttaaaaaatgtgatagatttctccatatccc 1278669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2909256 - 2909380
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   |||||||||| |||| ||||   |||||||||| || || |||||| ||||| || |  ||    
T  2909256 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatctctctattttttctcatattttgcacccctcaaagcctttcctttccttc 2909355  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  2909356 ccctccaaactcccaaacaaagcct 2909380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 38 - 125
Target Start/End: Original strand, 14439746 - 14439833
Alignment:
Q  38 aatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctccaaactcgcaaataaagcct 125  Q
    ||||||||||||||||||||||  ||||||||||| || || |||||||||| | || | ||| |||||||||||||||| |||||||    
T  14439746 aatttgaaagatttctccatttttcctcatatttttcacccctcaaagtcttccgtttccctcccctccaaactcgcaaacaaagcct 14439833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 28 - 122
Target Start/End: Complemental strand, 38795327 - 38795233
Alignment:
Q  28 tcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttca-ttcctctctcctccaaactcgcaaataaag 122  Q
    |||||||||||||||||||||||||| ||||| ||||||||||||||| |  |||||| |||||| |||| |||  ||||||||||||||| ||||    
T  38795327 tcttttaaaaaatttgaaagatttcttcattttccctcatattttccacctttcaaag-ctttcacttcccctccgctccaaactcgcaaacaaag 38795233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 34749957 - 34749895
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccc 63  Q
    |||||||||||||||||||||||| ||||||| ||||||| ||||||||||  ||||||||||    
T  34749957 ttaatttatcattctctaaaaaatcactctttcaaaaaatgtgaaagattttaccatttcccc 34749895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 6 - 56
Target Start/End: Original strand, 45439124 - 45439174
Alignment:
Q  6 ttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctcca 56  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  45439124 ttatcattctctaaaaaattactcttttaaaaaatgtaaaagatttctcca 45439174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 33579392 - 33579516
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||||||||||||||||||||||||||| ||||| | | ||||| ||  ||||||||||  |||||| | | ||  ||||  ||| ||||||| ||    
T  33579392 ttaatttatcattctctaaaaaattactctttcaaaaattgtaaaagactttaccatttccccctatatttccaaccctccaaaaccttccattcctttc 33579491  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
    |||| ||||||| |||| |||||||    
T  33579492 tccttcaaactcccaaacaaagcct 33579516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52073400 - 52073352
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagat 49  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  52073400 ttaatttatcattctctaaaaaattactctttcaaaaaatgtgaaagat 52073352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 32287719 - 32287789
Alignment:
Q  1 ttaatttatcattctctaa-aaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattt 71  Q
    ||||||||||||||||||| ||||||||| ||||||||||||||||   ||| |||||||||||||||||||    
T  32287719 ttaatttatcattctctaataaaattact-ttttaaaaaatttgaattttttttccatttcccctcatattt 32287789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 23800487 - 23800537
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||| |||||||||||||||||||||||||||||| | ||||||||    
T  23800487 ttaatttatgattctctaaaaaattactcttttaaaaaatataaaagattt 23800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43530240 - 43530182
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| |||||||||||  ||||||||||||||| ||||||||||||| ||||    
T  43530240 ttaatttatcactctctaaaaaaacactcttttaaaaaatgtgaaagatttctcaattt 43530182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 2 - 72
Target Start/End: Original strand, 50097754 - 50097824
Alignment:
Q  2 taatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    |||||||||| ||||||||||| |||||||| ||||||| ||||||||||||| ||||  ||| |||||||    
T  50097754 taatttatcactctctaaaaaaatactctttcaaaaaatgtgaaagatttctcaatttttccttatatttt 50097824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 50587172 - 50587230
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| ||||||| ||| |||||||||||||||| || |||||||||||||||    
T  50587172 ttaatttatcaatctctaacaaaatactcttttaaaaaatgtgtaagatttctccattt 50587230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 24369166 - 24369081
Alignment:
Q  40 tttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctccaaactcgcaaataaagcct 125  Q
    ||||||||||||||||||||  |||| |||||| || || |||||||||| | |||||||| |||| |||||| |||| |||||||    
T  24369166 tttgaaagatttctccatttttcctcgtattttgcacccctcaaagtcttcccttcctctcccctctaaactcacaaacaaagcct 24369081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13044528 - 13044477
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttct 53  Q
    ||||||||||| |||||||||||| ||||||||||||||| ||||||||||||    
T  13044528 ttaatttatcactctctaaaaaat-actcttttaaaaaatgtgaaagatttct 13044477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 4952258 - 4952333
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctcca-tttcccctcatattttcca 75  Q
    |||||||||||||||||||||||||||| |||||||   ||| |||||||| || | ||| |||||||||||||||    
T  4952258 ttaatttatcattctctaaaaaattactattttaaattttttaaaagatttatctatttttccctcatattttcca 4952333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 6538129 - 6538184
Alignment:
Q  4 atttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||| ||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  6538129 atttatcactctctaaaaaaatactctttcaaaaaatatgaaagatttctcaattt 6538184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 41817241 - 41817170
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    ||||||||||||||||||||||| ||||||||||||   |||||||||| |||| ||||  ||| |||||||    
T  41817241 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatctctctatttttccttatatttt 41817170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 46001705 - 46001776
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    ||||||||||||||||||||||| ||||||||||||   ||| ||||||||||| ||||  | |||||||||    
T  46001705 ttaatttatcattctctaaaaaactactcttttaaattttttaaaagatttctctatttttcttcatatttt 46001776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Original strand, 50476671 - 50476726
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttc 60  Q
    ||||||||| ||| ||||||| |||||| ||||||| |||||||||||||||||||    
T  50476671 tttatcattatcttaaaaattgctctttcaaaaaatgtgaaagatttctccatttc 50476726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 20712153 - 20712100
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| |||||||||||| ||||||||||| ||||| ||||||||||||    
T  20712153 tttatcattctttaaaaaattact-ttttaaaaaatatgaaacatttctccattt 20712100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28848741 - 28848691
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||||||||||||| ||||||| ||||| | ||||||||||    
T  28848741 ttaatttatcattctctaaaaaatgactctttaaaaaattgtgaaagattt 28848691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30543305 - 30543255
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||||||||||||||| ||||| ||||||| | ||||||||    
T  30543305 ttaatttatcattctctaaaaaattattctttcaaaaaatgtaaaagattt 30543255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 37875694 - 37875572
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||||||||| ||||||||  ||  ||||| ||| |||||||||||| ||||||| | |||||||||| || || |||||   ||||  ||| |||    
T  37875694 ttaatttatcattcactaaaaaaccacctttttagaaattttgaaagatttttccattttctctcatatttttcacccctcaaaacatttccctcccctc 37875595  T
Q  101 tcctccaaactcgcaaataaagc 123  Q
      ||||||||||||||| |||||    
T  37875594 ctctccaaactcgcaaacaaagc 37875572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50162277 - 50162327
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||| ||||||||||||||||| |||||| ||||||| ||||||||||    
T  50162277 ttaatttttcattctctaaaaaatttctctttcaaaaaatatgaaagattt 50162327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 4204722 - 4204597
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    |||||||||||||||||||||||  |||| |||| |    |||||||||||||||||||| ||||| || |||||| |  |||||| ||| |||||   |    
T  4204722 ttaatttatcattctctaaaaaaactactattttcatttttttgaaagatttctccattttccctcgtaatttccacctctcaaagccttccattctatt 4204623  T
Q  100 ctcctccaaactcgcaaataaagcct 125  Q
    | ||||||||||| |||| |||||||    
T  4204622 cccctccaaactcccaaacaaagcct 4204597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33324762 - 33324851
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctt 89  Q
    ||||||||||||| | |||||||  | ||||||||||| |||| ||| | |||||||||| ||||||||||| ||| || ||||||||||    
T  33324762 ttaatttatcattatttaaaaaaactcctcttttaaaacatttaaaaaaattctccattttccctcatatttcccacccctcaaagtctt 33324851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 51303117 - 51303064
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctc 54  Q
    ||||||||||||||||||||||   ||||||| ||||||| |||||||||||||    
T  51303117 ttaatttatcattctctaaaaatacactctttgaaaaaatgtgaaagatttctc 51303064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 29092224 - 29092293
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    |||||||| ||||||||||||||||||||  |||||   ||||||||||||||| ||||  |||||||||||    
T  29092224 ttaatttaccattctctaaaaaattactc--ttaaattttttgaaagatttctctatttttcctcatatttt 29092293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 34738454 - 34738538
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    ||||||||| ||||||||| ||| |||| |||  |||||||||||||| ||||  |||| |||  |||||||||||| |||||||    
T  34738454 ttaatttataattctctaacaaaatactttttctaaaaatttgaaagaattcttgattttcccctatattttccatcgatcaaag 34738538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 39886866 - 39886826
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatt 41  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  39886866 ttaatttatcattctctaaaaaactactattttaaaaaatt 39886826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 39125382 - 39125332
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttc 52  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||| |||||||    
T  39125382 ttaatttaacattctctaaaaaat-actctttaaaaaaatttgatagatttc 39125332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 49102915 - 49102859
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||  |||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  49102915 ttaatttatca--ctctaaaaaaatactctttcaaaaaatgtgaaagatttctcaattt 49102859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Complemental strand, 50598931 - 50598876
Alignment:
Q  4 atttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||||||| |||||||  ||||||  ||||||||||||| ||||    
T  50598931 atttatcattctctaaaaaaatactcttccaaaaaaagtgaaagatttctctattt 50598876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 718516 - 718466
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||| |||||||| |||||||  |||||| ||||||||||    
T  718516 ttaatttatcattctttaaaaaatcactctttcgaaaaatgtgaaagattt 718466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 9595700 - 9595758
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||||| ||||  ||| | | ||||||||||||||||||||| ||||    
T  9595700 ttaatttatcattctctacaaaacgactttctcaaaaaatttgaaagatttctctattt 9595758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 17556931 - 17556989
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| ||||||| |||  ||||||| ||||||| ||||||||||||| ||||    
T  17556931 ttaatttatcactctctaagaaaacactctttaaaaaaatgtgaaagatttctctattt 17556989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 25561260 - 25561202
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||| |||||| || |||||||| |||||||| ||||||| ||||||||||||| ||||    
T  25561260 ttaacttatcactcgctaaaaaaatactctttcaaaaaatgtgaaagatttctcaattt 25561202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36269882 - 36269939
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||| | | |||||||||    
T  36269882 ttaatttatcattctctaaaaaa-tactcttttagaaaatgtgaagggtctctccattt 36269939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41432704 - 41432654
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||| |||||||||||||||||||||  ||||||  ||||||||||    
T  41432704 ttaatttattattctctaaaaaattactcttgcaaaaaacgtgaaagattt 41432654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 50247739 - 50247793
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||| || ||||||||||||| ||||  |||| |||||||    
T  50247739 tttatcattctctaaaaaactattcttttaaaaaatgtgaattatttgtccattt 50247793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17416660 - 17416611
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatt 50  Q
    ||||||||||| |||||||||||||||||||  ||||| | |||||||||    
T  17416660 ttaatttatcaatctctaaaaaattactcttacaaaaactgtgaaagatt 17416611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26345764 - 26345809
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaa 46  Q
    ||||||||||||||||||||||||||||| ||  |||||| |||||    
T  26345764 ttaatttatcattctctaaaaaattactcattcgaaaaatgtgaaa 26345809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 76; Significance: 3e-35; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 173 - 252
Target Start/End: Complemental strand, 13539407 - 13539328
Alignment:
Q  173 atcaatctctgactaagtctgggcttcaatttcttagatgtgggattccctgattttggcaaaactactagtatatatat 252  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13539407 atcaatctcagactaagtctgggcttcaatttcttagatgtgggattccctgattttggcaaaactactagtatatatat 13539328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 173 - 252
Target Start/End: Original strand, 13685067 - 13685146
Alignment:
Q  173 atcaatctctgactaagtctgggcttcaatttcttagatgtgggattccctgattttggcaaaactactagtatatatat 252  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13685067 atcaatctcagactaagtctgggcttcaatttcttagatgtgggattccctgattttggcaaaactactagtatatatat 13685146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 29584313 - 29584437
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||||| ||||| ||||| ||||||||| || |||||| ||||| |||| ||     
T  29584313 ttaatttatcattctctaaaaaactacacttttaaaaaatttgaaagatttcttcattttccctcgtattttccacccctcaaagcctttccttcccctt 29584412  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||||||||||||| |||||||    
T  29584413 ccctccaaactcgcaaacaaagcct 29584437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 34336169 - 34336293
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||  |||||||||||||| || |||||||||| |||||  |||    
T  34336169 ttaatttgtcattctctaaaaaactactcttttacaaaatttgaaagatttctccatttttcctcatattttccacccctcaaagtcttccattctcctc 34336268  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  34336269 ccctccaaactcacaaacaaagcct 34336293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 98
Target Start/End: Complemental strand, 13369862 - 13369762
Alignment:
Q  1 ttaatttatcattctctaaaaaa---ttactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcct 97  Q
    |||||||||||||||||||||||   ||||||||||||||||||||||||||||||| |||| | ||||||||||||| || |||||| || ||||||||    
T  13369862 ttaatttatcattctctaaaaaaaaattactcttttaaaaaatttgaaagatttctcaattttctctcatattttccacccctcaaagcctctcattcct 13369763  T
Q  98 c 98  Q
    |    
T  13369762 c 13369762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 79565 - 79439
Alignment:
Q  1 ttaatttatcattctctaaaaaatt--actcttttaaaaaat-ttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcct 97  Q
    ||||||||||||||||||||| | |  ||||||||||||||  ||||||||||||||||||| |||||||||||||||  | |||||| ||| | ||||     
T  79565 ttaatttatcattctctaaaagactctactcttttaaaaaaaattgaaagatttctccattttccctcatattttccactcctcaaagccttcccttccc 79466  T
Q  98 ctctcctccaaactcgcaaataaagcc 124  Q
    ||| |||||||||||||||| ||||||    
T  79465 ctcccctccaaactcgcaaacaaagcc 79439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 21173800 - 21173685
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||  | ||||||||| || || |||||||||||| || |  |     
T  21173800 ttaatttaccattctctaaaaaactactcttttaaaaaatttgtaagatttctctatttttcttcatattttgcacccctcaaagtctttcctttccttt 21173701  T
Q  101 tcctccaaactcgcaa 116  Q
     |||||||||||||||    
T  21173700 gcctccaaactcgcaa 21173685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 8228700 - 8228788
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctt 89  Q
    |||||| |||||||||||||||| ||||||||||||||| || |||||||| |||||||  |||| |||||||||||  ||||||||||    
T  8228700 ttaattcatcattctctaaaaaactactcttttaaaaaaattaaaagatttttccatttttcctcgtattttccatctctcaaagtctt 8228788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 36837440 - 36837329
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||||||||||||| |||| ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||||||||| || |  ||    
T  36837440 ttaatttatcattctctataaaactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagtctttcctttccttc 36837341  T
Q  101 tcctccaaactc 112  Q
     |||||||||||    
T  36837340 ccctccaaactc 36837329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 26772595 - 26772473
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||||| |||||||||||| ||||||||||||||| ||| |||||||||| ||||  ||| ||||||| || || |||||  |||| ||| |  ||    
T  26772595 ttaatttatccttctctaaaaaactactcttttaaaaaaattgtaagatttctctatttttccttatattttacacccctcaaaaccttttatttccttc 26772496  T
Q  101 tcctccaaactcgcaaataaagc 123  Q
     || |||||||||||||||||||    
T  26772495 cccaccaaactcgcaaataaagc 26772473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 72
Target Start/End: Original strand, 43239881 - 43239936
Alignment:
Q  17 taaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    ||||||| ||||||||||||||| ||||||||||||||||||| ||||||||||||    
T  43239881 taaaaaactactcttttaaaaaaattgaaagatttctccattttccctcatatttt 43239936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 12506138 - 12506014
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||| ||||||||||| | ||||||||||||   ||||||||||||||||||||   || |||||||||| || |||||  |||   |||| |||    
T  12506138 ttaatttataattctctaaaatactactcttttaaattttttgaaagatttctccattttttcttatattttccacccctcaaaaccttctcttcccctc 12506039  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||||| ||||||| |||||||    
T  12506038 ccctccaaattcgcaaacaaagcct 12506014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 13258625 - 13258681
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccat 57  Q
    ||||||||||||||||||||||| |||||||| ||||||| ||||||||||| ||||    
T  13258625 ttaatttatcattctctaaaaaaatactctttcaaaaaatgtgaaagatttccccat 13258681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Original strand, 37388418 - 37388490
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttc 73  Q
    |||||||||||||||||||||| ||||||||| ||||||| ||||||||||  |||||| || | ||||||||    
T  37388418 ttaatttatcattctctaaaaatttactctttcaaaaaatgtgaaagattttaccattttcctttatattttc 37388490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 23932490 - 23932367
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||| ||||||||||| ||||  | ||||||||| || || |||||| ||||| || |  ||    
T  23932490 ttaatttatcattctctaaaaaactactcttttaaattttttaaaagatttctctatttttcttcatattttgcacccctcaaagcctttcctttccttc 23932391  T
Q  101 tcctccaaactcgcaaataaagcc 124  Q
     |||| |||||| |||| ||||||    
T  23932390 ccctcaaaactcccaaacaaagcc 23932367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 1839762 - 1839704
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  1839762 ttaatttatcactctctaaaaaaatactctttcaaaaaatgtgaaagatttctcaattt 1839704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15108206 - 15108156
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||||||||||||||| ||||| ||||||| ||||||||||    
T  15108206 ttaatttatcattctctaaaaaattattctttcaaaaaatatgaaagattt 15108156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 11742660 - 11742775
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccat-caaagtctttcattcctct 99  Q
    ||||||||||||||||||||||| || | ||| ||||||| ||||||| |||| |||||   | ||||||| ||| |||| ||||  ||| |||||||||    
T  11742660 ttaatttatcattctctaaaaaactaatttttcaaaaaatgtgaaaga-ttcttcattttatcccatatttccca-ccatccaaacccttccattcctct 11742757  T
Q  100 ctcctccaaactcgcaaa 117  Q
    ||||||||||||||||||    
T  11742758 ctcctccaaactcgcaaa 11742775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 10878727 - 10878656
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    ||||||||||| ||||||||||| |||||||| ||||||  | ||||||||||| |||| |||| |||||||    
T  10878727 ttaatttatcactctctaaaaaaatactctttcaaaaaaagttaaagatttctcaattttcccttatatttt 10878656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 5 - 60
Target Start/End: Complemental strand, 43733052 - 43732997
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttc 60  Q
    ||||||||| ||||||||||| |||||  ||||||| |||||||||||||||||||    
T  43733052 tttatcattatctaaaaaattgctcttccaaaaaatgtgaaagatttctccatttc 43732997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 3394100 - 3394150
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||||| |||||||||||||| ||||||| || |||||||    
T  3394100 ttaatttatcattctcttaaaaattactctttcaaaaaatgtgcaagattt 3394150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 13227849 - 13227939
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttc 91  Q
    ||||||||| ||| ||||||||||   |||| ||||   |||||||||||||| ||||| |||||||||||||||  |||| |||||||||    
T  13227849 ttaatttataattatctaaaaaatctttcttataaattttttgaaagatttcttcattttccctcatattttccactcatctaagtctttc 13227939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13537481 - 13537531
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||| |||||||||||||||||||||| |||||| || ||||||||    
T  13537481 ttaatttattattctctaaaaaattactctttcaaaaaaattaaaagattt 13537531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13627029 - 13627079
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||| |||||||||||||||||||||| |||||| || ||||||||    
T  13627029 ttaatttattattctctaaaaaattactctttcaaaaaaattaaaagattt 13627079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 35856472 - 35856414
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||| |||||||||||||||||| |||||||| ||||| ||| |||||||| |||||||    
T  35856472 ttaacttatcattctctaaaaaaatactctttcaaaaattttaaaagatttttccattt 35856414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 72
Target Start/End: Complemental strand, 41865568 - 41865506
Alignment:
Q  10 cattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    |||||| ||||||| ||||||||||||   |||||||||||||| ||||| ||||||||||||    
T  41865568 cattctgtaaaaaactactcttttaaattttttgaaagatttcttcattttccctcatatttt 41865506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 26753848 - 26753796
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttct 53  Q
    ||||||||||||| ||||||||||||||| ||||||||||   ||||||||||    
T  26753848 ttaatttatcattatctaaaaaattactcctttaaaaaatgcaaaagatttct 26753796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 6447542 - 6447615
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttt---taaaaaatttgaaagatttctccatttcccctcatattt 71  Q
    ||||||||||||||||||||| | || |||||   |||||||| |||||||||||||||||  |||| ||||||    
T  6447542 ttaatttatcattctctaaaacaatattctttcaataaaaaatatgaaagatttctccattctcccttatattt 6447615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 10483093 - 10483025
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattt 71  Q
    ||||||||||||| |||||||||  || |||| ||||||| | |||||||||| |||||||||| ||||||    
T  10483093 ttaatttatcattttctaaaaaa--acactttcaaaaaatgtaaaagatttcttcatttccccttatattt 10483025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 39194074 - 39194129
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaa-tttgaaagatttctccattt 59  Q
    |||||||||||||||||||  ||||||| |||||| | ||||||||||||||||||    
T  39194074 tttatcattctctaaaaaaacactctttcaaaaaagtgtgaaagatttctccattt 39194129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 40985016 - 40984968
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||||||||||||||  |||| ||||||| ||||||||||    
T  40985016 ttaatttatcattctctaaaaaatta--ctttcaaaaaatatgaaagattt 40984968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 6943408 - 6943286
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    ||||||||||||||| |||||||  |||| |||||||   |||||||||||| |||  || |||||||||||||||  | |||||| |||  ||| | ||    
T  6943408 ttaatttatcattctttaaaaaaactactattttaaattttttgaaagatttatccggtttccctcatattttccacacctcaaagccttcaatttccct 6943309  T
Q  100 ctcctccaaactcgcaaataaag 122  Q
    | ||||||||||| |||| ||||    
T  6943308 cccctccaaactctcaaacaaag 6943286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 9054448 - 9054334
Alignment:
Q  6 ttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctc 105  Q
    |||||| | ||||||||| || ||||| ||||||| ||||||||||||| |||| ||   ||||||| |  ||  |||| ||||||||||| ||| | ||    
T  9054448 ttatcactatctaaaaaaatattctttcaaaaaatgtgaaagatttctcaattttcctctatatttttctccccccaaattctttcattcccctcccatc 9054349  T
Q  106 caaactcgcaaataa 120  Q
    ||||||| |||||||    
T  9054348 caaactcccaaataa 9054334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 32158904 - 32158962
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||| | ||||||||||| ||||||||  |||||| ||||||||||||| ||||    
T  32158904 ttaatttattactctctaaaaaaatactctttacaaaaatgtgaaagatttctcaattt 32158962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 25 - 111
Target Start/End: Complemental strand, 4873166 - 4873076
Alignment:
Q  25 tactcttttaaaaaatttgaaagatttctccatttcccctc----atattttccatccatcaaagtctttcattcctctctcctccaaact 111  Q
    ||||||||||||   |||||||||||||| ||||| |||||    ||||||||||||| |||||  |||||||||| ||  ||||||||||    
T  4873166 tactcttttaaattttttgaaagatttcttcattttccctcatatatattttccatccttcaaaacctttcattccccttccctccaaact 4873076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 69; Significance: 5e-31; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 3537345 - 3537469
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| || |||||| ||| |  |||  ||    
T  3537345 ttaatttatcattctctaaaaaactactcttttaaaaaatttgaaagatttcttcattttccctcatattttccacccctcaaagccttcccctcccttc 3537444  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  3537445 ccctccaaactcccaaacaaagcct 3537469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 51686645 - 51686769
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||| |||| ||||||||| |||||||||| ||||| ||||| ||||||||| || |||||| |||||||||  ||     
T  51686645 ttaatttatcattctctaaaaaagtacactttcaaaaaatttaaaagatttcttcattttccctcgtattttccacccttcaaagcctttcattcacctt 51686744  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||||||||||||| |||||||    
T  51686745 ccctccaaactcgcaaacaaagcct 51686769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 517574 - 517500
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttcca 75  Q
    ||||||||||||||||||||||| |||||||||||||| ||||||||||||||| |||| |||| ||||||||||    
T  517574 ttaatttatcattctctaaaaaactactcttttaaaaattttgaaagatttctcaattttccctaatattttcca 517500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 50948345 - 50948466
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtcttt-cattcctct 99  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||  | ||||||||| || |  ||||||||||| | ||||| |    
T  50948345 ttaatttaccattctctaaaaaactactcttttaaaaaatttgtaagatttctctatttttcttcatattttgcaccactcaaagtctttcctttccttt 50948444  T
Q  100 ctcctccaaactcgcaaataaag 122  Q
    | |||||||||||||||||||||    
T  50948445 c-cctccaaactcgcaaataaag 50948466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 5939723 - 5939599
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||| |||||||||||||||||| |||||||||||||||||||||||||||||| || |  ||| ||||||| || || |||||| ||||| || |  ||    
T  5939723 ttaaattatcattctctaaaaaactactcttttaaaaaatttgaaagatttctctatatttccttatattttgcacccctcaaagcctttcctttccttc 5939624  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  5939623 ccctccaaactcccaaacaaagcct 5939599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 34280626 - 34280750
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||| |||||||||  | ||||||||    |||||||||||||||||||| ||||||||||||||| || |||||| ||| | |||| | |    
T  34280626 ttaatttatcattatctaaaaaaccaatcttttaatttttttgaaagatttctccattttccctcatattttccacccctcaaagccttcccttccccac 34280725  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  34280726 ccctccaaactcacaaacaaagcct 34280750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 34729279 - 34729165
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||| |||| |||||| |||||||||| ||||| |||||||||||| ||||  ||||||||| ||  ||||| ||| ||||| ||||    
T  34729279 ttaatttatcattctcttaaaatttactc-tttaaaaaatgtgaaaaatttctccattttcccttgtattttccaacc-ccaaagccttccattcttctc 34729182  T
Q  101 tcctccaaactcgcaaa 117  Q
    |||||||||||| ||||    
T  34729181 tcctccaaactcacaaa 34729165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 48908834 - 48908710
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||  ||||||||| | || || |||||| ||||| || |  ||    
T  48908834 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatattctgcacccctcaaagcctttcctttccttc 48908735  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  48908734 ccctccaaactcccaaacaaagcct 48908710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 49183824 - 49183898
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttcca 75  Q
    |||||||||||||||||| |||  ||||||||||||   |||||||||||||||||||| |||||||||||||||    
T  49183824 ttaatttatcattctctataaagctactcttttaaattttttgaaagatttctccattttccctcatattttcca 49183898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 122
Target Start/End: Complemental strand, 50535045 - 50534928
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcct 104  Q
    ||||||||| ||||||||| ||||| ||||||   |||||||||||||||||||| ||||||||||||||| |  ||||||  ||   |||| ||| |||    
T  50535045 tttatcattttctaaaaaactactcatttaaattttttgaaagatttctccattttccctcatattttccaccactcaaagcattctgttcccctcccct 50534946  T
Q  105 ccaaactcgcaaataaag 122  Q
    ||||||||||||| ||||    
T  50534945 ccaaactcgcaaacaaag 50534928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 53664551 - 53664426
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctc-catttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    |||||||| |||||||||||||| |||||||||||||  |||| ||||||||||  ||||  | ||||||||| ||||| ||||| |||||| || |  |    
T  53664551 ttaatttaccattctctaaaaaactactcttttaaaatttttgtaagatttctcttatttttcttcatattttgcatccctcaaaatctttcctttcctt 53664452  T
Q  100 ctcctccaaactcgcaaataaagcct 125  Q
    | |||||||||||||||| |||||||    
T  53664451 cccctccaaactcgcaaacaaagcct 53664426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37674095 - 37673971
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||| ||||||||||||||||||  |||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||| ||||| || |  ||    
T  37674095 ttaaattatcattctctaaaaaaccactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttcctttccttc 37673996  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  37673995 ccctccaaactcccaaagaaagcct 37673971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 38639718 - 38639842
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||  ||| ||||||| || || |||||| ||||| || |  ||    
T  38639718 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttccttatattttgcacccctcaaagcctttcttttccttc 38639817  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||| |||| |||| |||||||    
T  38639818 ccctccagactcccaaacaaagcct 38639842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 44400838 - 44400962
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||| ||||| |||||||||||| ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||| ||||| || |  ||    
T  44400838 ttaaattatcgttctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttcctttccttc 44400937  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  44400938 ccctccaaactcccaaacaaagcct 44400962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 33900657 - 33900562
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcc 96  Q
    ||||||||||||| ||||||||  |||||||||| ||||||||||| ||||||| ||||  ||||||||||| || || |||||  ||||||||||    
T  33900657 ttaatttatcattatctaaaaacctactcttttataaaatttgaaaaatttctctatttttcctcatattttgcacccttcaaaacctttcattcc 33900562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 1132877 - 1132827
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  1132877 ttaatttatcattctctaaaaaattactctttcaaaaaatgtgaaagattt 1132827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 4247256 - 4247306
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  4247256 ttaatttatcattctctaaaaaattactctttaaaaaaatatgaaagattt 4247306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 125
Target Start/End: Original strand, 16883855 - 16883972
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcct 104  Q
    ||||||||||||||||| | |||| |||||||   |||||||||||||||||||||||| |||||||||||||| | |||| ||| | |||| ||| | |    
T  16883855 tttatcattctctaaaacactactattttaaat--tttgaaagatttctccatttcccc-catattttccatcccttaaagccttcccttccgctccctt 16883951  T
Q  105 ccaaactcgcaaataaagcct 125  Q
     |||||||| ||| |||||||    
T  16883952 gcaaactcgtaaacaaagcct 16883972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 7 - 85
Target Start/End: Original strand, 47359457 - 47359537
Alignment:
Q  7 tatcattctctaaaaaat--tactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    |||||||||||||||||   ||||||||||||   |||||||||||||||||||| ||||||||||||||| || ||||||    
T  47359457 tatcattctctaaaaaaaactactcttttaaattttttgaaagatttctccattttccctcatattttccacccctcaaag 47359537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 3334003 - 3334061
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||||||| |||||||  ||||||| ||||||||||||| ||||    
T  3334003 ttaatttatcattctctaaaaaaatactcttccaaaaaatgtgaaagatttctcaattt 3334061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 33944582 - 33944458
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtcttt-cattcctct 99  Q
    ||||||||| ||||||||| ||| ||||||||||||   ||| ||||||||||| ||||  ||||||||||| || || |||||| |||| | ||||| |    
T  33944582 ttaatttattattctctaacaaactactcttttaaattttttaaaagatttctctatttttcctcatattttgcacccctcaaagcctttcctttccttt 33944483  T
Q  100 ctcctccaaactcgcaaataaagcct 125  Q
    | ||||||||||| |||| |||||||    
T  33944482 c-cctccaaactcccaaacaaagcct 33944458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 53620360 - 53620413
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctc 54  Q
    ||||||||||||||||||||||| |||||||| ||||||| || ||||||||||    
T  53620360 ttaatttatcattctctaaaaaaatactctttcaaaaaatgtgtaagatttctc 53620413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 25754054 - 25753970
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    ||||||||||||||| ||||||| |||||||||||    ||||||||||||||| ||||  ||||||||||| || || ||||||    
T  25754054 ttaatttatcattctttaaaaaactactcttttaatttttttgaaagatttctctatttttcctcatattttacacccctcaaag 25753970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 13638565 - 13638616
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatt-tgaaagattt 51  Q
    ||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  13638565 ttaatttatcattctctaaaaatgtactcttttaaaaaattgtgaaagattt 13638616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32858969 - 32859018
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||||||||| |||||||||| ||||||| ||||||||||    
T  32858969 ttaatttatcattctctaaaa-attactctttcaaaaaatgtgaaagattt 32859018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 46891525 - 46891583
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| ||||||||||| || ||||| ||||||| ||||||||||||| ||||    
T  46891525 ttaatttatcagtctctaaaaaaataatctttcaaaaaatatgaaagatttctcaattt 46891583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 45570886 - 45570802
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    ||||||||| ||||||||||| | ||||||| |||| || ||||||||| |||  ||||  |||||||||||||| || ||||||    
T  45570886 ttaatttattattctctaaaatactactcttataaataaattgaaagatctctttatttttcctcatattttccacccttcaaag 45570802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 2984030 - 2984069
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaat 40  Q
    ||||| |||||||||||||||||||||||||| |||||||    
T  2984030 ttaatgtatcattctctaaaaaattactctttcaaaaaat 2984069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 31651387 - 31651348
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaat 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  31651387 ttaatttaacattctctaaaaaattactctttcaaaaaat 31651348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43273946 - 43273994
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||| ||||||||||  |||||||||||| ||||||||||    
T  43273946 ttaatttatcattctttaaaaaatta--cttttaaaaaatatgaaagattt 43273994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 64
Target Start/End: Complemental strand, 48951981 - 48951922
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccct 64  Q
    ||||||||| ||||||||| |||||||| ||||| | | ||| |||||||||||||||||    
T  48951981 tttatcattttctaaaaaaatactctttcaaaaattgtaaaaaatttctccatttcccct 48951922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 15499237 - 15499191
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||||||| ||||| ||| ||||||| ||||||||||    
T  15499237 tttatcattctctaaaaatttactatttcaaaaaatgtgaaagattt 15499191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 51
Target Start/End: Complemental strand, 18257646 - 18257600
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||||||  ||| |||||||||||| ||||||||||    
T  18257646 tttatcattctctaaaaatatacccttttaaaaaatgtgaaagattt 18257600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 35283226 - 35283284
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| |||  |||||| |||||||| ||||||| ||||||||||||| ||||    
T  35283226 ttaatttatcactctaaaaaaaaatactctttcaaaaaatgtgaaagatttctcaattt 35283284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 50201707 - 50201757
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||| |||||||||||||| |||||||| ||||| | ||||||||||    
T  50201707 ttaatttaccattctctaaaaaaatactctttcaaaaattgtgaaagattt 50201757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 54877360 - 54877315
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaa 46  Q
    |||||||||||||||||||||||| | | ||||||| |||||||||    
T  54877360 ttaatttatcattctctaaaaaatcaattttttaaagaatttgaaa 54877315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 27197425 - 27197481
Alignment:
Q  40 tttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcc 96  Q
    |||||||||||| ||||||| | |||||||||| || || |||||| ||||||||||    
T  27197425 tttgaaagatttttccattttctctcatatttttcacccttcaaagcctttcattcc 27197481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Original strand, 36637940 - 36637996
Alignment:
Q  3 aatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||| |||||||| || |||| ||| ||||||| ||||||||||||| ||||    
T  36637940 aatttatcactctctaaataaatactttttcaaaaaatgtgaaagatttctcaattt 36637996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 65; Significance: 1e-28; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 1270645 - 1270533
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||| |||  ||||||||||||| |||| ||||||||||||||||  ||    
T  1270645 ttaatttatcattctctaaaaaaactactcttttaaaaaatttaaaagatttctcaattctccctcatattttctatccctcaaagtctttcattctcct 1270546  T
Q  100 ctcctccaaactc 112  Q
    | |||||||||||    
T  1270545 cccctccaaactc 1270533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 1364962 - 1365086
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||  | ||||||||| || || |||||| ||||| || |  ||    
T  1364962 ttaatttaccattctctaaaaaactactcttttaaaaaatttgtaagatttctctatttttcttcatattttgcacccctcaaagcctttcctttccttc 1365061  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||||||||||||| |||||||    
T  1365062 ccctccaaactcgcaaacaaagcct 1365086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 21626264 - 21626388
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||  ||||||||||| || || |||||| |||||||| |  ||    
T  21626264 ttaatttatcattctctaaaaacctactcttttagaaaatttgaaaaatttctccatttttcctcatattttgcacccctcaaagcctttcatttccttc 21626363  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||| ||||||| |||| |||||||    
T  21626364 cccttcaaactcccaaacaaagcct 21626388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 13018420 - 13018296
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||||||||||| ||||   | |||||||| || || |||||| ||||| || |  ||    
T  13018420 ttaatttatcattctctaaaaaactactcttttaaaaaaattgaaagatttctctattttttcacatattttgcacccctcaaagcctttcctttccttc 13018321  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  13018320 ccctccaaactcccaaacaaagcct 13018296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 43572486 - 43572362
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||| ||||| || |  ||    
T  43572486 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttcctttccttc 43572387  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  43572386 ccctccaaactcccaaacaaagcct 43572362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 15234810 - 15234699
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcct 104  Q
    ||||||||||| ||||||| |||| |||||||||| || ||| |||||||||||| ||||| ||||||||| || ||||||||||   |||| ||| |||    
T  15234810 tttatcattctttaaaaaactactattttaaaaaaatttaaaaatttctccattttccctcgtattttccacccctcaaagtcttctcttcccctcccct 15234711  T
Q  105 ccaaactcgcaa 116  Q
    ||||||||||||    
T  15234710 ccaaactcgcaa 15234699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 40212142 - 40212264
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtc-tttcattcctct 99  Q
    ||||||||||||||||||||||| |||||||||||||  ||||||||||||||| ||||  ||||||||||| || || |||||| | |||| ||||| |    
T  40212142 ttaatttatcattctctaaaaaactactcttttaaaatttttgaaagatttctctatttttcctcatattttgcacccctcaaagccttttctttcct-t 40212240  T
Q  100 ctcctccaaactcgcaaataaagc 123  Q
    | ||||||||||| |||| |||||    
T  40212241 cccctccaaactcccaaacaaagc 40212264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 41100056 - 41099933
Alignment:
Q  2 taatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctct 101  Q
    ||||||||||||||||||||||  ||||||||||||  ||| |||||||||| ||||| |||||||||||| || || |||||| ||| |  ||| ||||    
T  41100056 taatttatcattctctaaaaaaccactcttttaaaatttttaaaagatttcttcattttccctcatatttttcacccctcaaagccttcccctcccctct 41099957  T
Q  102 cctccaaactcgcaaataaagcct 125  Q
    |||||||| || |||| |||||||    
T  41099956 cctccaaattcccaaacaaagcct 41099933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 37194406 - 37194530
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||| ||||||||  |||     
T  37194406 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttcattt-tctt 37194504  T
Q  101 tcc-tccaaactcgcaaataaagcct 125  Q
    ||| ||||||||| |||| |||||||    
T  37194505 tccctccaaactcccaaacaaagcct 37194530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 11515183 - 11515307
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||  | ||||||||| ||  | |||||  ||||| || |  ||    
T  11515183 ttaatttaccattctctaaaaaactactcttttaaaaaatttgtaagatttctctatttttcttcatattttgcactcctcaaaacctttcctttccttc 11515282  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||||||||||||| |||||||    
T  11515283 ccctccaaactcgcaaacaaagcct 11515307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 35550100 - 35549985
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| || |||||||||   ||| |||||||| || ||| ||| |||||||||||| || |||||| |||||||||| |||    
T  35550100 ttaatttatcattctctaaaaaactattcttttaaattttttaaaagatttttcaattaccc-tcatattttccacccctcaaagcctttcattcccctc 35550002  T
Q  101 tcctccaaactcgcaaa 117  Q
     ||||||||||| ||||    
T  35550001 ccctccaaactctcaaa 35549985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 116
Target Start/End: Complemental strand, 30072359 - 30072272
Alignment:
Q  29 cttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctccaaactcgcaa 116  Q
    ||||||||||||||||||||| ||||||||||| |||||||||| || || |||||  ||||| |||||||  |||||||||||||||    
T  30072359 cttttaaaaaatttgaaagatctctccatttcctctcatattttacacccctcaaaacctttccttcctcttccctccaaactcgcaa 30072272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 34757745 - 34757828
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaa 84  Q
    ||||||||||||||||||| ||||||||||||| |||  ||||||||||||||| |||| | ||||||||||||| || |||||    
T  34757745 ttaatttatcattctctaagaaattactcttttcaaatttttgaaagatttctcaattttctctcatattttccacccctcaaa 34757828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 7367716 - 7367841
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccatttcccctcatattttcca-tccatcaaagtctttcattcctc 98  Q
    |||||||||||||||||||||||  || ||||| ||||||| |||||||||||| ||||| ||||||||||||||| ||| | |||| ||| | |||| |    
T  7367716 ttaatttatcattctctaaaaaaactattctttaaaaaaatgtgaaagatttcttcattttccctcatattttccactccct-aaagccttcccttccac 7367814  T
Q  99 tctcctccaaactcgcaaataaagcct 125  Q
    || ||||||||||| |||| |||||||    
T  7367815 tcccctccaaactctcaaacaaagcct 7367841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 31082940 - 31083061
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||||||||||||||||||  |||| |||||    ||||| |||||||||||||| |||||||||||||||    |||||| ||||| |||| |||    
T  31082940 ttaatttatcattctctaaaaaaccactcatttaatttttttgatagatttctccattttccctcatattttcca---ctcaaagcctttccttcccctc 31083036  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  31083037 ccctccaaactcccaaacaaagcct 31083061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 15803311 - 15803435
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||| |||| |||  ||||||  |  ||  ||||| ||||| |||| |||    
T  15803311 ttaatttatcactctctaaaaaaatactctttcaaaaaatgtgaaagatttctcaattttcccctatatttctctccccccaaagcctttccttcccctc 15803410  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  15803411 ccctccaaactcccaaacaaagcct 15803435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 39205156 - 39205272
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||| ||||||||||| ||||||||||||   |||||||||||||| ||||| ||||||||  ||||| || | |||| ||| | |||| |||    
T  39205156 ttaatttatcactctctaaaaaactactcttttaaattttttgaaagatttctacattttccctcatacattccacccctaaaagccttcccttcccctc 39205255  T
Q  101 tcctccaaactcgcaaa 117  Q
     ||| ||||||||||||    
T  39205256 cccttcaaactcgcaaa 39205272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 36030932 - 36030990
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||||||| ||||||||  |||||| ||||||||||||||||||    
T  36030932 ttaatttatcattctctaaaaaaatactctttccaaaaatgtgaaagatttctccattt 36030990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 16625742 - 16625686
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttccc 62  Q
    |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||    
T  16625742 tttatcattctctaaaaaat-actctttcaaaaaatgtgaaagatttctccatttccc 16625686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18590177 - 18590293
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||| |||| |||||||||  |||||||||||   |||||||||||||| | ||| ||||||||||||| |||| ||||||||||  ||| || ||    
T  18590177 ttaatttaccattttctaaaaaaacactcttttaaattttttgaaagatttcttcgttttccctcatattttctatccctcaaagtcttcaattact-tc 18590275  T
Q  101 tcctccaaactcgcaaat 118  Q
     |||||||||| ||||||    
T  18590276 ccctccaaacttgcaaat 18590293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 32761223 - 32761166
Alignment:
Q  6 ttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccc 63  Q
    |||||||||||||||||| |||  ||| ||||||| ||||||||||||||||||||||    
T  32761223 ttatcattctctaaaaaaatacattttcaaaaaatgtgaaagatttctccatttcccc 32761166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 89
Target Start/End: Complemental strand, 28539369 - 28539281
Alignment:
Q  2 taatttatcattctct-aaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctt 89  Q
    |||||||||||||||| |||||| |||| |||||||   |||||||||||||| ||||| || |||||||||||| || | ||||||||    
T  28539369 taatttatcattctcttaaaaaactactattttaaattttttgaaagatttcttcattttccttcatattttccaccccttaaagtctt 28539281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 30523416 - 30523476
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcc 61  Q
    ||||||||||||||| ||||||| |||||||| ||||||| ||||||||||  ||||||||    
T  30523416 ttaatttatcattctttaaaaaactactctttcaaaaaatgtgaaagattttaccatttcc 30523476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 8184067 - 8184028
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaat 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  8184067 ttaatttatcattctctaaaaaattactctttcaaaaaat 8184028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 32951015 - 32951066
Alignment:
Q  1 ttaatttatcattctctaaaaaa-ttactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||||||||||| |||||||||||||| || ||||||||||    
T  32951015 ttaatttatcattctctaaaaaagttactcttttaaaagatgtgaaagattt 32951066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 43190502 - 43190431
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    |||||||||||||||||| |||| ||||||||||||   ||| ||||||||||| ||||  |||||||||||    
T  43190502 ttaatttatcattctctagaaaactactcttttaaattttttaaaagatttctctatttttcctcatatttt 43190431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 30265301 - 30265251
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||| |||||||||||||||||||||| ||||||| | ||||||||    
T  30265301 ttaatttattattctctaaaaaattactctttcaaaaaatataaaagattt 30265251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 43100510 - 43100452
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||| ||| |||||||| ||||||| |||||||| | |||||||    
T  43100510 ttaatttatcattctctaataaaatactctttcaaaaaatatgaaagatatttccattt 43100452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 4 - 112
Target Start/End: Original strand, 21835049 - 21835158
Alignment:
Q  4 atttatcattctctaaaaaattactcttt-taaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctc 102  Q
    ||||||||||||||||||||  |||||||  ||||||| ||||||| || ||||||| || | ||||||| || || |||||| ||||| | || ||| |    
T  21835049 atttatcattctctaaaaaaacactctttcaaaaaaatgtgaaagaattttccattttccttaatatttttcacccctcaaagcctttcttacccctccc 21835148  T
Q  103 ctccaaactc 112  Q
    ||||||||||    
T  21835149 ctccaaactc 21835158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16813762 - 16813845
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    ||||||||| |||||||||||||  |||||||||||   ||| ||||||||||  |||| ||||||||||||||| || ||||||    
T  16813762 ttaatttat-attctctaaaaaaccactcttttaaattttttaaaagatttctttattttccctcatattttccacccttcaaag 16813845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 16853041 - 16853124
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    ||||||||| |||||||||||||  |||||||||||   ||| ||||||||||  |||| ||||||||||||||| || ||||||    
T  16853041 ttaatttat-attctctaaaaaaccactcttttaaattttttaaaagatttctttattttccctcatattttccacccttcaaag 16853124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 11522122 - 11522066
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||  |||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  11522122 ttaatttatca--ctctaaaaaaatactctttcaaaaaatgtgaaagatttctcaattt 11522066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 64
Target Start/End: Complemental strand, 26618547 - 26618484
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccct 64  Q
    ||||||||||||||| || ||||||||| ||| ||| ||| |||||||||| ||||||| ||||    
T  26618547 ttaatttatcattctttataaaattactgtttcaaataatgtgaaagatttttccattttccct 26618484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 29880907 - 29880961
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||||| |||||| |||||   ||||||||||| ||||||    
T  29880907 tttatcattctctaaaaaattgctctttcaaaaacagtgaaagatttcaccattt 29880961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33206926 - 33206976
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||| ||||||||||||||  ||||||| ||||||| ||||||||||    
T  33206926 ttaatttaacattctctaaaaaaacactctttcaaaaaatgtgaaagattt 33206976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 39913412 - 39913462
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||  |||||||||| ||||| ||| ||||||||||||||    
T  39913412 ttaatttatcattccataaaaaattagtctttaaaataatttgaaagattt 39913462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 4666274 - 4666323
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatt 50  Q
    ||||||||||| ||||||| ||| |||||||| ||||||| |||||||||    
T  4666274 ttaatttatcactctctaataaaatactctttcaaaaaatatgaaagatt 4666323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 13767559 - 13767613
Alignment:
Q  4 atttatcattctctaa-aaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||| ||||||||||||| ||||||  ||||||||||| ||||||    
T  13767559 atttatcattctctaataaaattactctttcaaaaaa--tgaaagatttcaccattt 13767613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 39670121 - 39670068
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccat 57  Q
    |||||||||||||||||||| ||  || |||||||||||| ||||||||||||||||    
T  39670121 ttaatttatcattctctaaataa--ac-cttttaaaaaatgtgaaagatttctccat 39670068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 12941739 - 12941687
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttct 53  Q
    ||||||||||| ||||| ||||| || | ||| ||||||||||||||||||||    
T  12941739 ttaatttatcactctctgaaaaaatattttttcaaaaaatttgaaagatttct 12941687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 14385219 - 14385314
Alignment:
Q  1 ttaatttatcattctctaaaaaattactctttt-aaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcc 96  Q
    |||||||||||||||||||||||| | |||||| ||||||| ||||||||||  | |||| ||   |||||||| | ||  ||||||||||||||||    
T  14385219 ttaatttatcattctctaaaaaatca-tcttttcaaaaaatgtgaaagattttactattttcctctatattttcaaccctccaaagtctttcattcc 14385314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 36870378 - 36870499
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcct-ct 99  Q
    ||||||||||| ||||||||||| ||  |||| ||||| | ||||| ||||||| |||| |||  ||||||| |  ||  ||||| ||||| ||||| ||    
T  36870378 ttaatttatcactctctaaaaaaata--ctttcaaaaattgtgaaaaatttctcaattttcccctatatttttctccccccaaagcctttccttcctcct 36870475  T
Q  100 ctcctccaaactcgcaaataaagc 123  Q
    | ||||||||||| ||||||||||    
T  36870476 cccctccaaactcccaaataaagc 36870499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 37260 - 37377
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||| |||  ||||||||||||| | || ||||||||||||||||  ||    
T  37260 ttaatttatcattctctaaaaaaactactcttttaaaaaatttaaaagatttctcaattctccctcatattttctacccctcaaagtctttcattctcct 37359  T
Q  100 ctcctccaaactcgcaaa 117  Q
    | ||||||||||| ||||    
T  37360 cccctccaaactcacaaa 37377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 30592 - 30704
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||| |||  ||||||||||||| | || ||||||||||||||||  ||    
T  30592 ttaatttatcattctctaaaaaaactactcttttaaaaaatttaaaagatttctcaattctccctcatattttctaaccctcaaagtctttcattctcct 30691  T
Q  100 ctcctccaaactc 112  Q
    | |||||||||||    
T  30692 cccctccaaactc 30704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 3e-26; HSPs: 23)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 12779652 - 12779776
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||  |||||||||| ||||||||||| ||||||||||||  ||||||||||| || || ||||||||||||||| |  ||    
T  12779652 ttaatttatcattctctaaaaacctactcttttagaaaatttgaaaaatttctccatttttcctcatattttgcacccctcaaagtctttcatttccttc 12779751  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||| ||||||| |||| |||||||    
T  12779752 cccttcaaactcccaaacaaagcct 12779776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 1567420 - 1567542
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||| |||||||||||||| | ||||||||||||||||| |||||||||| ||||  | ||||||||| ||  | |||||| |||||||| || ||    
T  1567420 ttaatttaccattctctaaaaaactgctcttttaaaaaatttgtaagatttctctatttttcttcatattttgca--cctcaaagcctttcatttctttc 1567517  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
      ||||||||||||||| |||||||    
T  1567518 ctctccaaactcgcaaacaaagcct 1567542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 24849492 - 24849373
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaat-ttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    ||||||||||||||| | |||||  ||||||||||||||  |||||||||||||  |||| ||||||||||||||| || |||||  |||||||||| ||    
T  24849492 ttaatttatcattctttgaaaaaccactcttttaaaaaaaattgaaagatttcttaattttccctcatattttccacccctcaaaacctttcattcccct 24849393  T
Q  100 ctcctccaaactcgcaaata 119  Q
    |  ||||||||| |||||||    
T  24849392 cctctccaaacttgcaaata 24849373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 32719241 - 32719117
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||   |||||||||| || || |||||| ||||| || |  ||    
T  32719241 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttactcatattttgcacccctcaaagcctttcctttccttc 32719142  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||| |||||| |||| |||||||    
T  32719141 ccctctaaactcccaaacaaagcct 32719117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 20820477 - 20820354
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaa-aaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    ||||||||| ||||||||||||| ||||||||||| |||| ||||||   |||||||||| ||||||||||||||| || |||||   |||| |||| ||    
T  20820477 ttaatttattattctctaaaaaactactcttttaaaaaaaattgaaatgattctccattttccctcatattttccacccctcaaatcttttccttcccct 20820378  T
Q  100 ctcctccaaactcgcaaataaagc 123  Q
    | |||| |||| |||||| |||||    
T  20820377 cccctctaaacccgcaaacaaagc 20820354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 33590271 - 33590216
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctcca 56  Q
    ||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||    
T  33590271 ttaatttatcattctctaaaaaactactcttttaaaaaaattgaaaaatttctcca 33590216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 11180070 - 11179986
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    ||||||||||||| ||||||||| |||||||||||||| ||||||  ||||||| ||||  ||||||||||| || || ||||||    
T  11180070 ttaatttatcattatctaaaaaactactcttttaaaaattttgaagaatttctctatttatcctcatattttgcacccctcaaag 11179986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 33755178 - 33755266
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctt 89  Q
    ||||||||||||||| |||||||||| |||||||||   |||||||||||| | ||||| ||||| ||||||||| |  ||||||||||    
T  33755178 ttaatttatcattctataaaaaattaatcttttaaattttttgaaagattttttcattttccctcgtattttccaccattcaaagtctt 33755266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 16329518 - 16329627
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||||||||||||||||||||| ||||| ||||||| | ||||||||   ||||| | |  |||||| | | || |||||||||||| ||||||||    
T  16329518 ttaatttatcattctctaaaaaattattctttcaaaaaatgtaaaagattttatcattttctcctatatttccaacccttcaaagtctttc-ttcctctc 16329616  T
Q  101 tcctccaaact 111  Q
    ||||| |||||    
T  16329617 tcctctaaact 16329627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 16361681 - 16361731
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||||||||||||||| ||||||||||||| | ||||||||    
T  16361681 ttaatttatcattctctaaaaaattaatcttttaaaaaatgtaaaagattt 16361731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 33184305 - 33184375
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattt 71  Q
    ||||||||||| ||||||||||| |||||||| ||||||| ||||||||||||  |||| |||| ||||||    
T  33184305 ttaatttatcactctctaaaaaaatactctttcaaaaaatatgaaagatttcttaattttcccttatattt 33184375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 6695438 - 6695493
Alignment:
Q  4 atttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||||||| |||||||| ||||| | ||||| ||||||||||||    
T  6695438 atttatcattctctaaaaaaatactctttcaaaaagtatgaaaaatttctccattt 6695493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 6687890 - 6687832
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||||||| |||||||||||    |||||||||||| |||||||    
T  6687890 ttaatttatcattctctaaaaaactactcttttaatttttttgaaagatttgtccattt 6687832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 59
Target Start/End: Complemental strand, 9104884 - 9104830
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||| || |||||||| ||||||  ||||||||||||||||||    
T  9104884 tttatcattctctaaataaatactctttcaaaaaacatgaaagatttctccattt 9104830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13120364 - 13120326
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaa 39  Q
    |||||||||||||||||||||||||||||||| ||||||    
T  13120364 ttaatttatcattctctaaaaaattactctttcaaaaaa 13120326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26683456 - 26683505
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||||| ||||||||||||||| ||||||| ||||||||||    
T  26683456 ttaatttatcattctc-aaaaaattactctttcaaaaaatatgaaagattt 26683505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 25 - 125
Target Start/End: Complemental strand, 28551823 - 28551725
Alignment:
Q  25 tactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctccaaactcgcaaataaagcc 124  Q
    ||||||||||||   ||||||||||||||| |||  ||||||||||||||| |  ||||||| || | |||| ||| ||||||||||| |||| ||||||    
T  28551823 tactcttttaaattttttgaaagatttctctatt--ccctcatattttccacctttcaaagttttcccttcccctcccctccaaactcccaaacaaagcc 28551726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Complemental strand, 8439337 - 8439280
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||||||| |||| ||| ||||||| | ||||||||||| ||||    
T  8439337 ttaatttatcattctctaaaaaa-tactttttcaaaaaatataaaagatttctctattt 8439280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 597077 - 597000
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatcc 78  Q
    |||||||||| ||||||| |||  |||||||| ||||||| ||||||||||||  ||||  ||  |||||||||||||    
T  597077 ttaatttatcgttctctacaaagatactctttgaaaaaatatgaaagatttcttaatttttccctatattttccatcc 597000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19477395 - 19477428
Alignment:
Q  1 ttaatttatcattctctaaaaaattactctttta 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  19477395 ttaatttatcattctctgaaaaattactctttta 19477428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Complemental strand, 2502261 - 2502213
Alignment:
Q  6 ttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctc 54  Q
    |||||| ||||||| ||| |||||||| ||||||| |||||||||||||    
T  2502261 ttatcactctctaagaaaatactctttcaaaaaatgtgaaagatttctc 2502213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 6855790 - 6855913
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||| | ||||||| || ||||| |||   ||| ||| |||| | ||||| ||||||||||||||| || |||||| ||||| || | |||    
T  6855790 ttaatttatcattatttaaaaaactattctttcaaattttttaaaatattttttcattttccctcatattttccacccctcaaagcctttcttttccctc 6855889  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||  ||||||||||| |||||||    
T  6855890 -cctttaaactcgcaaacaaagcct 6855913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 15986482 - 15986510
Alignment:
Q  1 ttaatttatcattctctaaaaaattactc 29  Q
    |||||||||||||||||||||||||||||    
T  15986482 ttaatttatcattctctaaaaaattactc 15986510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 61; Significance: 3e-26; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 117
Target Start/End: Original strand, 13569501 - 13569617
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||| |||||||||||||||||| |||||||||||||||||| ||||||||||| ||||  ||||||||||| || ||||||||||||||| || |  ||    
T  13569501 ttaaattatcattctctaaaaaactactcttttaaaaaatttaaaagatttctctatttttcctcatattttgcacccatcaaagtctttcctttccttc 13569600  T
Q  101 tcctccaaactcgcaaa 117  Q
     ||||||||||| ||||    
T  13569601 ccctccaaactcccaaa 13569617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 5772672 - 5772548
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||| |||||||||||||| ||||||||||||||||||| ||| |||||| ||||  | ||||||||| || || |||||||||||| || |  ||    
T  5772672 ttaatttaccattctctaaaaaactactcttttaaaaaatttgtaaggtttctctatttttcttcatattttgcacccctcaaagtctttcctttccttc 5772573  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||||||||||||| |||||||    
T  5772572 ccctccaaactcgcaaacaaagcct 5772548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 35683415 - 35683291
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||| |||||||||||||| ||||||||||||||||||| |||||||||| ||||  | ||||||||| || || |||||| ||||||||    ||    
T  35683415 ttaatttaccattctctaaaaaactactcttttaaaaaatttgtaagatttctctatttttcttcatattttgcacccctcaaagcctttcattttcttc 35683316  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||||||||||||||| |||||||    
T  35683315 ccctccaaactcgcaaacaaagcct 35683291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 14569992 - 14569902
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttc 91  Q
    |||||||||||||||||||||||  |||||||||||   |||||||||||||||||||| ||||||||||||||| || |||||| |||||    
T  14569992 ttaatttatcattctctaaaaaacaactcttttaaattttttgaaagatttctccattttccctcatattttccacccctcaaagcctttc 14569902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 10843173 - 10843295
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcat-tcctct 99  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||| ||||| | |||| |    
T  10843173 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttcctctcct-t 10843271  T
Q  100 ctcctccaaactcgcaaataaagc 123  Q
    | ||||||||||| |||| |||||    
T  10843272 cccctccaaactcccaaacaaagc 10843295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 3924798 - 3924728
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattt 71  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||| ||||||||||  ||||||||||    
T  3924798 ttaatttatcattctctaaaaaattactcttccaaaaaatgtgaaagaattctccatttttcctcatattt 3924728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 38568320 - 38568247
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttcca 75  Q
    |||||||||| ||||||||||| | |||||||||||||| ||||||||||||| ||||| |||||||||||||||    
T  38568320 ttaatttatccttctctaaaaact-actcttttaaaaaaattgaaagatttcttcattttccctcatattttcca 38568247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 125
Target Start/End: Complemental strand, 10955621 - 10955507
Alignment:
Q  11 attctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctccaaac 110  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||||||  ||||||||||| ||  | ||||||  |||| |||   ||  ||||||||    
T  10955621 attctctaaaaaactactcttttaaaatttttgaaagatttctccatttttcctcatatttttcactcctcaaagcttttccttctcttcctctccaaac 10955522  T
Q  111 tcgcaaataaagcct 125  Q
    || ||||||||||||    
T  10955521 tctcaaataaagcct 10955507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 8944184 - 8944243
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||||||||||  |||||||||||||||||| ||||||||||| ||||    
T  8944184 ttaatttatcattctctaaaaaaactactcttttaaaaaatttaaaagatttctcaattt 8944243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 9096450 - 9096519
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattt 71  Q
    |||||||||||||||||||||||| ||| ||| ||||||| ||| | |||||||||||||||| |||||||    
T  9096450 ttaatttatcattctctaaaaaat-actttttcaaaaaatgtgacaaatttctccatttccccccatattt 9096519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 10438115 - 10438209
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattc 95  Q
    |||||||||| |||| ||||||| |||| | ||||||||||| ||| ||||||| ||||  ||||||||||| || || |||||| |||||||||    
T  10438115 ttaatttatctttctttaaaaaactactatgttaaaaaatttaaaaaatttctctatttttcctcatattttgcacccctcaaagcctttcattc 10438209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 17668076 - 17668026
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||| ||||||||||||||||| ||||||| ||||||||||    
T  17668076 ttaatttatcattccctaaaaaattactctttcaaaaaatgtgaaagattt 17668026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 19389770 - 19389700
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattt 71  Q
    |||||||||||||||||||||||||| ||||| ||||| | ||||||||||  |||||| ||| |||||||    
T  19389770 ttaatttatcattctctaaaaaattaatctttcaaaaattgtgaaagattttaccattttcccacatattt 19389700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 4 - 59
Target Start/End: Original strand, 22114847 - 22114903
Alignment:
Q  4 atttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||||  |||||||| ||||||| ||||||||||||||||||    
T  22114847 atttatcattctctaaaaaaaatactctttaaaaaaatgtgaaagatttctccattt 22114903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 63
Target Start/End: Complemental strand, 1935049 - 1934989
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccc 63  Q
    |||||||||||  |||||||||| || ||||||||||||| ||||||||||||| ||||||||    
T  1935049 ttaatttatca--ctctaaaaaaatagtcttttaaaaaatgtgaaagatttctcaatttcccc 1934989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Complemental strand, 12656303 - 12656232
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    ||||||||| ||||| ||||||   ||||||||||||||| |||||||||||||||||| | | ||||||||    
T  12656303 ttaatttataattctttaaaaatcaactcttttaaaaaatgtgaaagatttctccattttctcacatatttt 12656232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 9684733 - 9684683
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||| |||||||||||||||||| ||||||| || |||||||    
T  9684733 ttaatttatcattttctaaaaaattactctttcaaaaaatgtggaagattt 9684683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 35042343 - 35042393
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||||||||||||||||||  ||||| ||||||| ||||||||||    
T  35042343 ttaatttatcattctctaaaaaatttatctttcaaaaaatatgaaagattt 35042393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15917531 - 15917584
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctc 54  Q
    ||||||||||| |||||| |||| |||||||| ||||||| |||||||||||||    
T  15917531 ttaatttatcactctctacaaaaatactctttcaaaaaatatgaaagatttctc 15917584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 59
Target Start/End: Original strand, 35704752 - 35704809
Alignment:
Q  2 taatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||||||||| |||  ||| ||||||| ||||||||||||| ||||    
T  35704752 taatttatcattctctaaaaaaatacattttcaaaaaatgtgaaagatttctctattt 35704809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4841651 - 4841599
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttct 53  Q
    ||||||||||| ||| ||||||| |||||||| ||||||| ||||||||||||    
T  4841651 ttaatttatcactctataaaaaaatactctttaaaaaaatgtgaaagatttct 4841599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 18675665 - 18675629
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaa 37  Q
    ||||||||||||||||||||||| |||||||||||||    
T  18675665 ttaatttatcattctctaaaaaactactcttttaaaa 18675629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 85
Target Start/End: Original strand, 39649710 - 39649794
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    |||| |||||||||||||||||| |||| ||| |||   ||||||||||||||| ||||  ||||||||||| || || ||||||    
T  39649710 ttaaattatcattctctaaaaaactactttttaaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaag 39649794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 27350948 - 27350909
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaat 40  Q
    |||||||||| ||||||||||||||||||||| |||||||    
T  27350948 ttaatttatcgttctctaaaaaattactctttaaaaaaat 27350909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 51
Target Start/End: Original strand, 31632976 - 31633023
Alignment:
Q  4 atttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||| |||| |||||||| ||||||| ||||||||||    
T  31632976 atttatcattctctacaaaaatactctttcaaaaaatgtgaaagattt 31633023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 122
Target Start/End: Complemental strand, 1838913 - 1838851
Alignment:
Q  60 cccctcatattttccatccatcaaagtctttcattcctctctcctccaaactcgcaaataaag 122  Q
    ||||||||||||||||||| |||||||||| |  | || |||||| |||||||||||| ||||    
T  1838913 cccctcatattttccatccctcaaagtcttccccttctttctccttcaaactcgcaaacaaag 1838851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 28523757 - 28523807
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||| |||||||| | ||||| ||||||| ||||||||||    
T  28523757 ttaatttatcattctttaaaaaatcattctttcaaaaaatatgaaagattt 28523807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 33682511 - 33682561
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||| ||||| |||||||||||||||| | ||||||| ||||||||||    
T  33682511 ttaatttttcattttctaaaaaattactctataaaaaaatgtgaaagattt 33682561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 6632787 - 6632836
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatt 50  Q
    ||||||||||| ||||||||||| |||| ||||||||||| || ||||||    
T  6632787 ttaatttatcactctctaaaaaaatacttttttaaaaaatgtggaagatt 6632836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 1978286 - 1978330
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagat 49  Q
    ||||||||| |||||||||||||||||  ||||||| ||||||||    
T  1978286 tttatcattttctaaaaaattactcttccaaaaaatgtgaaagat 1978330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7398723 - 7398679
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaa 45  Q
    |||||||||||||||||||||||||| ||||  ||||||| ||||    
T  7398723 ttaatttatcattctctaaaaaattagtcttacaaaaaatgtgaa 7398679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 25027065 - 25027105
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaa 45  Q
    |||||||||||||||||||||| ||||| ||||||| ||||    
T  25027065 tttatcattctctaaaaaattattctttcaaaaaatgtgaa 25027105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 7 - 39
Target Start/End: Complemental strand, 31535251 - 31535219
Alignment:
Q  7 tatcattctctaaaaaattactcttttaaaaaa 39  Q
    |||||||||||||||||||||||||| ||||||    
T  31535251 tatcattctctaaaaaattactctttcaaaaaa 31535219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 33
Target Start/End: Original strand, 32750726 - 32750754
Alignment:
Q  5 tttatcattctctaaaaaattactctttt 33  Q
    |||||||||||||||||||||||||||||    
T  32750726 tttatcattctctaaaaaattactctttt 32750754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 5 - 45
Target Start/End: Original strand, 33718324 - 33718364
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaa 45  Q
    ||||||||||||||||||| |  ||||||||||||||||||    
T  33718324 tttatcattctctaaaaaactgttcttttaaaaaatttgaa 33718364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 38136776 - 38136652
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| |||| |||||||||||| || || |||||| ||||| ||||  ||    
T  38136776 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctattttccctcatattttgcacccctcaaagcctttccttcccttc 38136677  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  38136676 ccctccaaactcccaaacaaagcct 38136652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 29114185 - 29114061
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| || |||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||| ||||| || |  ||    
T  29114185 ttaatttatcattctctaaaaaactattcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttcctttccttc 29114086  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||| |||| |||||||    
T  29114085 ccctccaaactcccaaacaaagcct 29114061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 30198713 - 30198589
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||| ||||| || |  ||    
T  30198713 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttcctttccttc 30198614  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
      |||||||||| |||| |||||||    
T  30198613 ctctccaaactcccaaacaaagcct 30198589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 111
Target Start/End: Original strand, 9021073 - 9021183
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||||||||||  |||||| |||  |||||| | | || |||||||||| | ||||||||    
T  9021073 ttaatttatcatactctaaaaaattaatcttttaaaaaatgtgaaagattttaccattttcccctatatttccaacccttcaaagtcttcccttcctctc 9021172  T
Q  101 tcctccaaact 111  Q
      |||||||||    
T  9021173 cgctccaaact 9021183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 33500659 - 33500784
Alignment:
Q  1 ttaatttatcattctctaaaaaattactctttt-aaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    ||||||||||||||||||||||| ||||||||| |||||| ||||||| |||||| ||||  || |||||||| || || |||||| ||||| || |  |    
T  33500659 ttaatttatcattctctaaaaaactactcttttaaaaaaaattgaaaggtttctctatttttccacatattttgcacccctcaaagcctttcctttcctt 33500758  T
Q  100 ctcctccaaactcgcaaataaagcct 125  Q
    | ||||||||||| |||| |||||||    
T  33500759 cccctccaaactcccaaacaaagcct 33500784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 49668056 - 49667970
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctt 89  Q
    ||||||||||||||| ||||||| ||||||||||||   ||||| | |||||||||||| |||||||||||||||||| ||||| ||||    
T  49668056 ttaatttatcattctttaaaaaactactcttttaaat--tttgacacatttctccattttccctcatattttccatccctcaaaatctt 49667970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 125
Target Start/End: Complemental strand, 22165699 - 22165584
Alignment:
Q  12 ttctctaaaaaattactcttttaaaaaatttgaa--agatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctccaaa 109  Q
    |||||||||||| ||||| |||||||||||| ||  | ||||||| |||| ||||||||||||||| |  |||||| ||| | |||||||| ||||||||    
T  22165699 ttctctaaaaaactactcgtttaaaaaatttaaatcatatttctcaattttccctcatattttccacctctcaaagccttcccttcctctcccctccaaa 22165600  T
Q  110 ctcgcaaataaagcct 125  Q
    ||| |||| |||||||    
T  22165599 ctcacaaacaaagcct 22165584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 2 - 125
Target Start/End: Complemental strand, 41709059 - 41708936
Alignment:
Q  2 taatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctct 101  Q
    ||||||||||||||| |||||| |||||||| ||    |||||||||||||||||||   ||||||||||| ||  | |||||||||| | |||| ||      
T  41709059 taatttatcattctccaaaaaactactctttgaatttttttgaaagatttctccattctacctcatatttttcaatcctcaaagtcttcccttccccttc 41708960  T
Q  102 cctccaaactcgcaaataaagcct 125  Q
    |||||||||||||||| |||||||    
T  41708959 cctccaaactcgcaaagaaagcct 41708936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 12708776 - 12708686
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttc 91  Q
    |||||||||||||||||||| || ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || |||||| |||||    
T  12708776 ttaatttatcattctctaaataactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaagcctttc 12708686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 16423052 - 16423125
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttcc 74  Q
    ||||||||||||||||||||||| || ||||||||    ||||||||||||||| |||| ||||||||||||||    
T  16423052 ttaatttatcattctctaaaaaactattcttttaatttttttgaaagatttctctattttccctcatattttcc 16423125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 73
Target Start/End: Complemental strand, 20896351 - 20896279
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttc 73  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||||||||   ||||| ||||| |||||||    
T  20896351 ttaatttatcattttctaaaaaactactcttttaaaaaaattgaaagattttctcattttccctcgtattttc 20896279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 50494596 - 50494480
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||| ||||||||||||||||| ||  ||||||||   ||||||||| ||||| |||| ||||||||||||  |||| |||||||||||| ||||  ||    
T  50494596 ttaatctatcattctctaaaaaactatccttttaaattttttgaaagaattctctattttccctcatattttttatccttcaaagtctttccttcccttc 50494497  T
Q  101 tcctccaaactcgcaaa 117  Q
      |||||||||| ||||    
T  50494496 cgctccaaactcccaaa 50494480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 62
Target Start/End: Complemental strand, 46176875 - 46176819
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttccc 62  Q
    ||||||||||||||||||| |||||||| ||||||| || ||||||||||||||||||    
T  46176875 tttatcattctctaaaaaaatactctttcaaaaaatgtg-aagatttctccatttccc 46176819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 37969683 - 37969561
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||| |||||||||||| | ||||||||||| |||||||||| | ||||| |||  |||||||| | ||   |||||||||| |||| |||    
T  37969683 ttaatttatcattatctaaaaaattaat-ttttaaaaaatgtgaaagatttat-cattttcccatatattttcaaccctctaaagtctttccttcccctc 37969586  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     ||||||||||  |||| |||||||    
T  37969585 ccctccaaacttccaaacaaagcct 37969561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 368196 - 368255
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||||||||||  |||||||||||||  ||||||||||||||| ||||    
T  368196 ttaatttatcattctctaaaaaaactactcttttaaaatttttgaaagatttctcaattt 368255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 24662686 - 24662639
Alignment:
Q  4 atttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||||||||||||||||| | ||||| ||||||||||    
T  24662686 atttatcattctctaaaaaattactctttcagaaaatgtgaaagattt 24662639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 59
Target Start/End: Original strand, 38644632 - 38644683
Alignment:
Q  8 atcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||| || ||||| ||||||| ||||||||||||||||||    
T  38644632 atcattctctaaaaaaatagtctttcaaaaaatgtgaaagatttctccattt 38644683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 8828152 - 8828078
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttcca 75  Q
    ||||||||||||||||||||||||| ||| ||  |||||| ||||| |||| ||||||| | || ||||||||||    
T  8828152 ttaatttatcattctctaaaaaattgctcattcgaaaaatgtgaaacatttatccattttctcttatattttcca 8828078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 15451279 - 15451229
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||| | |||||||||||||||| ||||||| ||||||||||    
T  15451279 ttaatttatcattatttaaaaaattactctttcaaaaaatgtgaaagattt 15451229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28880130 - 28880188
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| ||||||||||| |||||||| ||||||| | ||||||||||| ||||    
T  28880130 ttaatttatcactctctaaaaaaatactctttcaaaaaatgtaaaagatttctcaattt 28880188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 6 - 51
Target Start/End: Complemental strand, 42759589 - 42759544
Alignment:
Q  6 ttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||||||||||||||| ||||||||| ||||||| ||||||||||    
T  42759589 ttatcattctctaaaaatttactctttcaaaaaatgtgaaagattt 42759544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43793557 - 43793610
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctc 54  Q
    ||||||||| ||| ||||||||| |||||||||||||||||| | |||||||||    
T  43793557 ttaatttataattatctaaaaaactactcttttaaaaaatttaatagatttctc 43793610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 3 - 59
Target Start/End: Complemental strand, 46669885 - 46669828
Alignment:
Q  3 aatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||||||||||||  |||||||| ||||||| ||||||||||||| ||||    
T  46669885 aatttatcattctctaaaaaaaatactctttaaaaaaatgtgaaagatttctcaattt 46669828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 28175406 - 28175354
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttct 53  Q
    ||||||||||||||||||||||| ||||||||||||   ||| ||||||||||    
T  28175406 ttaatttatcattctctaaaaaactactcttttaaattttttaaaagatttct 28175354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 55510016 - 55510090
Alignment:
Q  1 ttaatttatcattctct--aaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttcc 74  Q
    |||||||||||||||||  |||||| ||||||||| |||  ||||||||||||||| |||| ||||| ||||||||    
T  55510016 ttaatttatcattctctaaaaaaaactactctttt-aaatttttgaaagatttctctattttccctcgtattttcc 55510090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 16318756 - 16318827
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    |||||||| |||||||||||||| |||| || ||| ||||||| |||||||||| ||||  | |||||||||    
T  16318756 ttaatttaccattctctaaaaaactactattctaagaaatttgtaagatttctctatttttcttcatatttt 16318827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 25056581 - 25056542
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaat 40  Q
    ||||||||||||| ||| ||||||||||||||||||||||    
T  25056581 ttaatttatcattatctgaaaaattactcttttaaaaaat 25056542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 75
Target Start/End: Complemental strand, 28880366 - 28880303
Alignment:
Q  12 ttctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttcca 75  Q
    ||||||| |||| || |||||||||||||||||||  ||| || |||||||||| |||||||||    
T  28880366 ttctctacaaaactattcttttaaaaaatttgaaatttttttctatttcccctcgtattttcca 28880303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 12 - 59
Target Start/End: Complemental strand, 45022468 - 45022421
Alignment:
Q  12 ttctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    |||||||||||| |||||||| ||||||| ||||||||||||| ||||    
T  45022468 ttctctaaaaaaatactctttcaaaaaatgtgaaagatttctctattt 45022421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 52554940 - 52554901
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaat 40  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  52554940 ttaatttatcattttataaaaaattactcttttaaaaaat 52554901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18397052 - 18397110
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||| ||| ||| ||| |||||||| ||||||| ||||||||||||| ||||    
T  18397052 ttaatttatcactctttaagaaaatactctttcaaaaaatgtgaaagatttctcaattt 18397110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 18399740 - 18399798
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||| | ||| ||| ||| |||||||| ||||||||||||||||||||| ||||    
T  18399740 ttaatttattactctttaagaaaatactctttcaaaaaatttgaaagatttctcaattt 18399798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 41495582 - 41495532
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    ||||| ||||||||| ||||||||||||| |||||||||| | ||||||||    
T  41495582 ttaatctatcattctttaaaaaattactcgtttaaaaaatataaaagattt 41495532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 59
Target Start/End: Original strand, 54206012 - 54206066
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccattt 59  Q
    ||||||||||||||||||  |||||||| ||||||| ||||| ||||||| ||||    
T  54206012 tttatcattctctaaaaagatactctttcaaaaaatatgaaacatttctctattt 54206066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 122
Target Start/End: Original strand, 6121430 - 6121523
Alignment:
Q  29 cttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctccaaactcgcaaataaag 122  Q
    |||| |||| || ||||||||||||| |||| |||| ||||||  | |||  ||||||||||| |||| ||| ||| ||||||| |||||||||    
T  6121430 ctttcaaaatatgtgaaagatttctcaattttcccttatatttctcttcctccaaagtctttccttcccctcccctacaaactcccaaataaag 6121523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 44 - 125
Target Start/End: Original strand, 35959349 - 35959430
Alignment:
Q  44 aaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctccaaactcgcaaataaagcct 125  Q
    |||||||||||||||||||   |||||||||| ||  ||||| ||||| | || ||| ||||||||||| |||| |||||||    
T  35959349 aaagatttctccatttccctctatattttccaccccccaaagcctttcctacccctcccctccaaactcccaaacaaagcct 35959430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 73
Target Start/End: Original strand, 56118024 - 56118093
Alignment:
Q  4 atttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttc 73  Q
    ||||||||||||||||| ||| |||| || ||||||| ||||||||||  || ||| |||| ||||||||    
T  56118024 atttatcattctctaaagaatcactcgttaaaaaaatatgaaagattttaccgttttcccttatattttc 56118093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 123
Target Start/End: Complemental strand, 16461627 - 16461547
Alignment:
Q  44 aaagatttctccatttcccctcatattttccatccatcaaag-tctttcattcctctctcctccaaactcgcaaataaagc 123  Q
    ||||||||||| |||| ||||||||||||||| || |||||| | | || |||| |||  ||||||||||||||| |||||    
T  16461627 aaagatttctcaattttccctcatattttccacccctcaaagctttctctttcccctcctctccaaactcgcaaacaaagc 16461547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 25843975 - 25844026
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttct 53  Q
    |||||||||  |||||||||||||||||| ||| |||||| ||||||||||||    
T  25843975 ttaatttattcttctctaaaaaattactc-tttcaaaaatatgaaagatttct 25844026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 6 - 54
Target Start/End: Original strand, 27143364 - 27143412
Alignment:
Q  6 ttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctc 54  Q
    |||||| ||||||| ||| |||||||| ||||||| |||||||||||||    
T  27143364 ttatcactctctaagaaaatactctttcaaaaaatgtgaaagatttctc 27143412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 51
Target Start/End: Complemental strand, 27485202 - 27485154
Alignment:
Q  4 atttatcattctctaaaa-aattactcttttaaaaaatttgaaagattt 51  Q
    |||||||||| ||||||| ||||||||||| ||||||| ||||||||||    
T  27485202 atttatcattttctaaaataattactctttaaaaaaatgtgaaagattt 27485154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 4 - 64
Target Start/End: Original strand, 30307510 - 30307570
Alignment:
Q  4 atttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccct 64  Q
    |||| ||| ||||||||||| ||||| || ||||||| ||||||||||||| |||| ||||    
T  30307510 atttttcactctctaaaaaaatactcattaaaaaaatgtgaaagatttctcaattttccct 30307570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 41844574 - 41844618
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaa 45  Q
    |||||||||||||||||||||||||  ||||| ||||||| ||||    
T  41844574 ttaatttatcattctctaaaaaattgttctttcaaaaaatgtgaa 41844618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49936641 - 49936689
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagat 49  Q
    ||||||||||||||||||||||| ||||| |  ||||||| ||||||||    
T  49936641 ttaatttatcattctctaaaaaaatactcctacaaaaaatgtgaaagat 49936689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0248 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0248
Description:

Target: scaffold0248; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 138 - 14
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    ||||||||||||||||||||||| ||||||||||||   ||||||||||||||| ||||  |||||||| || || || |||||| |||||||| || ||    
T  138 ttaatttatcattctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatatgttgcacccttcaaagcctttcatttctttc 39  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     |||| |||||| ||||||||||||    
T  38 ccctctaaactcccaaataaagcct 14  T

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Target: scaffold0024 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 44919 - 44831
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctt 89  Q
    |||| ||||||||||||||||||||||||||||||||||||| |||||||| | ||||| |||| |||||||||| || ||||| ||||    
T  44919 ttaaattatcattctctaaaaaattactcttttaaaaaatttaaaagattttttcattttccctaatattttccacccgtcaaaatctt 44831  T

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Target: scaffold0388 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0388
Description:

Target: scaffold0388; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 7210 - 7284
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttcca 75  Q
    ||||||||||||| ||||||||| ||||||||||||||| |||||| |||||||||||| |||||||| ||||||    
T  7210 ttaatttatcattttctaaaaaactactcttttaaaaaaattgaaaaatttctccattttccctcatactttcca 7284  T

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Target: scaffold0263 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 18 - 117
Target Start/End: Complemental strand, 5909 - 5811
Alignment:
Q  18 aaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctctcctccaaactcgcaaa 117  Q
    |||||| |||||||| ||||| ||| |||||||||||||||| ||||||||||||||| || |||||||||| | |||||||  ||||||||||| ||||    
T  5909 aaaaaactactcttt-aaaaattttaaaagatttctccattttccctcatattttccacccctcaaagtcttcccttcctcttccctccaaactcccaaa 5811  T

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Target: scaffold0245 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0245
Description:

Target: scaffold0245; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4285 - 4346
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttccc 62  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||    
T  4285 ttaatttatcattctccaaaaaattactcttttaaaaaatgtgatagatttctccatatccc 4346  T

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Target: scaffold0229 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0229
Description:

Target: scaffold0229; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 4616 - 4677
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttccc 62  Q
    |||||||||||||||| ||||||||||||||||||||||| ||| |||||||||||| ||||    
T  4616 ttaatttatcattctccaaaaaattactcttttaaaaaatgtgatagatttctccatatccc 4677  T

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Target: scaffold0136 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0136
Description:

Target: scaffold0136; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1965 - 1912
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctc 54  Q
    |||||||| |||||||||||||||||||||||||||||||||| ||||||||||    
T  1965 ttaatttaccattctctaaaaaattactcttttaaaaaatttgtaagatttctc 1912  T

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Target: scaffold0051 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 94
Target Start/End: Complemental strand, 3510 - 3417
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcatt 94  Q
    ||||||||||||| ||||||| | ||||||||||||   ||||||||||||||| ||||  ||||||||||| || ||||||||| ||||||||    
T  3510 ttaatttatcattatctaaaatactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccatcaaagcctttcatt 3417  T

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Target: scaffold0053 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 29383 - 29507
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctctc 100  Q
    |||||||| |||||| ||||||| ||||||||||||||||||| ||||||| || ||||  | ||||||||| |  || ||||| |||||| || || |     
T  29383 ttaatttaccattctttaaaaaactactcttttaaaaaatttgtaagatttatctatttttcttcatattttgctcccctcaaaatctttcctttctttt 29482  T
Q  101 tcctccaaactcgcaaataaagcct 125  Q
     || ||||||||||||| |||||||    
T  29483 cccaccaaactcgcaaacaaagcct 29507  T

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Target: scaffold0031 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 93448 - 93364
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaag 85  Q
    ||||||||| ||||||||||||| ||||||||||||   ||||||||||||||| ||||  ||||||||||| || || ||||||    
T  93448 ttaatttattattctctaaaaaactactcttttaaattttttgaaagatttctctatttttcctcatattttgcacccctcaaag 93364  T

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Target: scaffold0128 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0128
Description:

Target: scaffold0128; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 26519 - 26644
Alignment:
Q  1 ttaatttatcattctctaaaaaat-tactcttttaaaaaatttgaaagatttctccatttcccctcatattttccatccatcaaagtctttcattcctct 99  Q
    |||||||||||||||||||||||  ||||||||||||   |||| |||||||||| ||||   |||||||||| || || |||||| ||||| || |  |    
T  26519 ttaatttatcattctctaaaaaaactactcttttaaattttttggaagatttctctattttttctcatattttgcacccctcaaagcctttcctttcctt 26618  T
Q  100 ctcctccaaactcgcaaataaagcct 125  Q
    | ||||||||||| |||| |||||||    
T  26619 cccctccaaactcccaaacaaagcct 26644  T

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Target: scaffold0991 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0991
Description:

Target: scaffold0991; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 72
Target Start/End: Original strand, 445 - 516
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcccctcatatttt 72  Q
    ||||||||||||| |||||||||||| | | ||||| | |||||| ||||||| ||||| ||||||||||||    
T  445 ttaatttatcattttctaaaaaattattttgttaaatattttgaacgatttcttcattttccctcatatttt 516  T

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Target: scaffold0648 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0648
Description:

Target: scaffold0648; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 78
Target Start/End: Complemental strand, 7382 - 7300
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagat-----ttctccatttcccctcatattttccatcc 78  Q
    |||||||| ||||| |||||||| || ||||||||||||| ||||||||     |||||||||| | ||||||||||||||||    
T  7382 ttaatttaccattcgctaaaaaactattcttttaaaaaatgtgaaagataagacttctccattttctctcatattttccatcc 7300  T

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Target: scaffold1763 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1763
Description:

Target: scaffold1763; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 546 - 496
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagattt 51  Q
    |||||||| ||||||||||||| ||||||||| ||||||| ||||| ||||    
T  546 ttaatttaacattctctaaaaatttactctttcaaaaaatgtgaaatattt 496  T

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Target: scaffold0274 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0274
Description:

Target: scaffold0274; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 78
Target Start/End: Original strand, 16075 - 16153
Alignment:
Q  5 tttatcattctctaaaaaattactcttttaaaaaatttgaaagat-----ttctccatttcccctcatattttccatcc 78  Q
    |||| ||||| |||||||| || ||||||||||||| ||||||||     |||||||||| | ||||||||||||||||    
T  16075 tttaccattcgctaaaaaactattcttttaaaaaatgtgaaagataagacttctccattttctctcatattttccatcc 16153  T

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Target: scaffold0026 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 82317 - 82257
Alignment:
Q  1 ttaatttatcattctctaaaaaattactcttttaaaaaatttgaaagatttctccatttcc 61  Q
    ||||||||||||| ||||||||  |||||||| | ||||| |||||||||| ||| |||||    
T  82317 ttaatttatcattatctaaaaatatactctttcagaaaatgtgaaagatttatccctttcc 82257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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