View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF7729_high_7 (Length: 346)

Name: NF7729_high_7
Description: NF7729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF7729_high_7
NF7729_high_7
[»] chr3 (75 HSPs)
chr3 (41-346)||(29454512-29454818)
chr3 (211-346)||(11646246-11646382)
chr3 (261-346)||(19543849-19543933)
chr3 (42-131)||(1111591-1111679)
chr3 (41-131)||(47008445-47008534)
chr3 (41-131)||(4024057-4024146)
chr3 (42-131)||(32467431-32467519)
chr3 (88-131)||(28811064-28811107)
chr3 (41-133)||(43701183-43701274)
chr3 (41-133)||(54928032-54928123)
chr3 (81-131)||(34021938-34021988)
chr3 (81-131)||(36005547-36005597)
chr3 (81-131)||(48904206-48904256)
chr3 (41-131)||(7181355-7181444)
chr3 (41-131)||(8321930-8322019)
chr3 (41-131)||(8546909-8546998)
chr3 (41-131)||(9499440-9499529)
chr3 (41-131)||(10220938-10221026)
chr3 (41-131)||(22103872-22103961)
chr3 (41-131)||(27646249-27646338)
chr3 (41-131)||(27687991-27688080)
chr3 (41-131)||(29719654-29719742)
chr3 (41-131)||(30819883-30819972)
chr3 (41-131)||(37728718-37728807)
chr3 (41-131)||(44543787-44543876)
chr3 (41-131)||(46878382-46878471)
chr3 (42-131)||(31186764-31186852)
chr3 (87-131)||(44561639-44561683)
chr3 (300-346)||(9013628-9013675)
chr3 (81-128)||(16776833-16776880)
chr3 (43-131)||(20862203-20862290)
chr3 (43-131)||(25148466-25148553)
chr3 (41-133)||(35868024-35868115)
chr3 (43-131)||(45404382-45404469)
chr3 (82-133)||(48902649-48902700)
chr3 (43-131)||(49543684-49543771)
chr3 (41-133)||(50647885-50647976)
chr3 (81-131)||(9780182-9780232)
chr3 (81-131)||(17589819-17589869)
chr3 (81-131)||(20656253-20656303)
chr3 (41-131)||(10015732-10015821)
chr3 (41-131)||(15996716-15996805)
chr3 (41-131)||(23700728-23700817)
chr3 (41-131)||(23719183-23719272)
chr3 (41-131)||(23737639-23737728)
chr3 (41-131)||(43978165-43978254)
chr3 (41-131)||(45324030-45324119)
chr3 (41-131)||(49127141-49127230)
chr3 (45-131)||(54782860-54782945)
chr3 (81-129)||(31541071-31541119)
chr3 (41-72)||(6784468-6784499)
chr3 (37-72)||(22527622-22527657)
chr3 (43-131)||(32569004-32569091)
chr3 (81-128)||(36730051-36730098)
chr3 (81-131)||(7251225-7251275)
chr3 (81-131)||(16435180-16435230)
chr3 (268-330)||(17403925-17403987)
chr3 (81-131)||(17591488-17591538)
chr3 (81-131)||(20621627-20621677)
chr3 (89-131)||(25130702-25130744)
chr3 (81-131)||(32969168-32969218)
chr3 (81-131)||(36317598-36317648)
chr3 (81-131)||(36584754-36584804)
chr3 (81-131)||(42755385-42755435)
chr3 (81-131)||(45513578-45513628)
chr3 (81-131)||(45745822-45745872)
chr3 (81-131)||(52693631-52693681)
chr3 (41-131)||(12683125-12683214)
chr3 (41-70)||(33360890-33360919)
chr3 (41-70)||(54604591-54604620)
chr3 (306-342)||(16976127-16976163)
chr3 (81-133)||(43158677-43158729)
chr3 (41-73)||(44542473-44542505)
chr3 (306-342)||(46403961-46403997)
chr3 (87-131)||(52291370-52291414)
[»] chr7 (61 HSPs)
chr7 (142-346)||(9746061-9746263)
chr7 (214-346)||(31212060-31212184)
chr7 (269-346)||(46001937-46002015)
chr7 (261-346)||(13170260-13170346)
chr7 (41-131)||(34012461-34012549)
chr7 (41-131)||(33381517-33381605)
chr7 (41-131)||(19845612-19845701)
chr7 (41-131)||(31458002-31458091)
chr7 (41-131)||(38858303-38858392)
chr7 (41-131)||(39871556-39871645)
chr7 (41-131)||(41252304-41252393)
chr7 (87-131)||(24504734-24504778)
chr7 (41-131)||(40300235-40300324)
chr7 (43-131)||(11647777-11647864)
chr7 (45-133)||(26736488-26736576)
chr7 (81-131)||(7400172-7400222)
chr7 (42-133)||(9140474-9140564)
chr7 (81-131)||(9682646-9682696)
chr7 (81-131)||(30534749-30534799)
chr7 (81-131)||(32699647-32699697)
chr7 (81-131)||(32964338-32964388)
chr7 (84-130)||(40121202-40121248)
chr7 (81-131)||(42888023-42888073)
chr7 (81-131)||(44510286-44510336)
chr7 (82-131)||(1574764-1574813)
chr7 (261-346)||(3388184-3388268)
chr7 (41-131)||(17317446-17317535)
chr7 (41-131)||(19292844-19292932)
chr7 (41-131)||(19920568-19920657)
chr7 (41-131)||(25247634-25247722)
chr7 (41-131)||(35569595-35569683)
chr7 (41-131)||(36646580-36646669)
chr7 (41-131)||(36711241-36711330)
chr7 (41-131)||(41003097-41003186)
chr7 (81-133)||(17491559-17491611)
chr7 (81-133)||(17561603-17561655)
chr7 (43-131)||(28060724-28060811)
chr7 (51-131)||(41444217-41444296)
chr7 (81-131)||(8782156-8782206)
chr7 (81-131)||(9036872-9036922)
chr7 (81-131)||(9233519-9233569)
chr7 (81-131)||(9299141-9299191)
chr7 (81-131)||(9303690-9303740)
chr7 (85-131)||(10475749-10475795)
chr7 (81-131)||(20074933-20074983)
chr7 (81-131)||(29064400-29064450)
chr7 (81-131)||(31200307-31200357)
chr7 (81-131)||(32643698-32643748)
chr7 (81-131)||(32759602-32759652)
chr7 (81-131)||(43934635-43934685)
chr7 (81-131)||(49045063-49045113)
chr7 (41-131)||(7703763-7703852)
chr7 (44-73)||(24211148-24211177)
chr7 (100-133)||(40299257-40299290)
chr7 (81-133)||(787977-788029)
chr7 (87-131)||(2006525-2006569)
chr7 (306-342)||(10288152-10288188)
chr7 (306-342)||(15873337-15873373)
chr7 (87-131)||(23919782-23919826)
chr7 (81-133)||(45907289-45907341)
chr7 (81-133)||(46148475-46148527)
[»] chr2 (68 HSPs)
chr2 (211-343)||(16130232-16130364)
chr2 (217-339)||(16330940-16331062)
chr2 (261-346)||(22404664-22404750)
chr2 (213-346)||(27976301-27976434)
chr2 (213-346)||(28062829-28062962)
chr2 (261-346)||(29045687-29045772)
chr2 (43-131)||(1859554-1859642)
chr2 (41-131)||(8841600-8841689)
chr2 (41-131)||(9701075-9701164)
chr2 (41-131)||(23788974-23789063)
chr2 (41-131)||(31633790-31633880)
chr2 (51-133)||(41834420-41834502)
chr2 (41-131)||(2438230-2438319)
chr2 (41-131)||(7491849-7491938)
chr2 (41-131)||(8912817-8912906)
chr2 (41-131)||(11865231-11865321)
chr2 (41-131)||(15404650-15404739)
chr2 (41-131)||(20252215-20252304)
chr2 (41-131)||(22182866-22182956)
chr2 (41-131)||(27560211-27560300)
chr2 (41-131)||(34883791-34883880)
chr2 (41-131)||(42629376-42629466)
chr2 (41-131)||(44573826-44573914)
chr2 (81-133)||(30830283-30830335)
chr2 (51-131)||(1943589-1943668)
chr2 (43-131)||(34113538-34113625)
chr2 (81-131)||(2200023-2200073)
chr2 (81-131)||(30857982-30858032)
chr2 (81-131)||(32712727-32712777)
chr2 (81-131)||(40544368-40544418)
chr2 (41-131)||(4408721-4408810)
chr2 (41-131)||(4711733-4711821)
chr2 (41-131)||(5664643-5664732)
chr2 (41-131)||(10757921-10758010)
chr2 (41-131)||(12890151-12890240)
chr2 (41-131)||(15228092-15228181)
chr2 (41-131)||(16805734-16805823)
chr2 (41-131)||(16845016-16845104)
chr2 (41-131)||(25624738-25624826)
chr2 (41-131)||(28566156-28566245)
chr2 (41-131)||(31751074-31751163)
chr2 (41-131)||(41422517-41422606)
chr2 (41-131)||(41494565-41494654)
chr2 (41-131)||(44436764-44436853)
chr2 (81-133)||(16108416-16108468)
chr2 (42-131)||(17665529-17665618)
chr2 (81-128)||(12296375-12296422)
chr2 (51-131)||(20727801-20727880)
chr2 (51-131)||(24300294-24300373)
chr2 (43-131)||(36750827-36750914)
chr2 (43-131)||(37229447-37229534)
chr2 (81-131)||(1359835-1359885)
chr2 (81-131)||(2788280-2788330)
chr2 (81-131)||(9698084-9698134)
chr2 (81-131)||(12619851-12619901)
chr2 (81-131)||(15918022-15918072)
chr2 (81-131)||(18374645-18374695)
chr2 (81-131)||(20643526-20643576)
chr2 (81-131)||(34432143-34432193)
chr2 (81-131)||(39833942-39833992)
chr2 (81-131)||(40789031-40789081)
chr2 (81-131)||(41003987-41004037)
chr2 (87-131)||(13215762-13215806)
chr2 (87-131)||(13336698-13336742)
chr2 (81-133)||(15435817-15435869)
chr2 (306-342)||(18292104-18292140)
chr2 (87-131)||(30466154-30466198)
chr2 (81-129)||(45151792-45151840)
[»] scaffold0022 (1 HSPs)
scaffold0022 (211-346)||(2875-3009)
[»] scaffold0016 (2 HSPs)
scaffold0016 (265-346)||(108737-108818)
scaffold0016 (129-183)||(109007-109061)
[»] chr4 (72 HSPs)
chr4 (211-346)||(10335211-10335348)
chr4 (211-343)||(41951261-41951393)
chr4 (261-346)||(18285342-18285428)
chr4 (211-346)||(41942246-41942383)
chr4 (43-131)||(30868743-30868831)
chr4 (41-131)||(56432523-56432612)
chr4 (41-133)||(55563067-55563159)
chr4 (41-131)||(26866806-26866895)
chr4 (41-131)||(28501329-28501418)
chr4 (41-131)||(36391859-36391948)
chr4 (41-131)||(37518009-37518099)
chr4 (41-131)||(37522225-37522315)
chr4 (41-131)||(52977987-52978076)
chr4 (41-131)||(26625945-26626034)
chr4 (81-131)||(23390291-23390341)
chr4 (81-131)||(52181127-52181177)
chr4 (41-131)||(4035830-4035919)
chr4 (41-131)||(4415970-4416059)
chr4 (41-131)||(5375500-5375589)
chr4 (41-131)||(5743602-5743691)
chr4 (41-131)||(35675863-35675952)
chr4 (41-131)||(36901052-36901142)
chr4 (41-131)||(47806865-47806954)
chr4 (41-131)||(375429-375518)
chr4 (87-131)||(6656687-6656731)
chr4 (41-131)||(24073069-24073158)
chr4 (81-131)||(6629416-6629466)
chr4 (81-131)||(10588118-10588168)
chr4 (81-131)||(13498429-13498479)
chr4 (81-131)||(13549024-13549074)
chr4 (41-128)||(15241485-15241570)
chr4 (81-131)||(20788975-20789025)
chr4 (81-131)||(35909685-35909735)
chr4 (81-131)||(39797478-39797528)
chr4 (41-131)||(1859149-1859238)
chr4 (41-131)||(17339083-17339172)
chr4 (41-131)||(17609964-17610052)
chr4 (45-131)||(37173842-37173927)
chr4 (41-131)||(37352549-37352637)
chr4 (41-131)||(37357448-37357536)
chr4 (41-131)||(46949997-46950086)
chr4 (41-131)||(48030318-48030407)
chr4 (41-131)||(49373636-49373725)
chr4 (41-131)||(53629797-53629886)
chr4 (41-131)||(32899162-32899250)
chr4 (87-131)||(39144454-39144498)
chr4 (88-131)||(38613458-38613501)
chr4 (43-131)||(49490110-49490198)
chr4 (81-131)||(625910-625960)
chr4 (300-346)||(2683312-2683358)
chr4 (81-131)||(17261389-17261439)
chr4 (81-131)||(17467935-17467985)
chr4 (81-131)||(18706585-18706635)
chr4 (81-131)||(29014267-29014317)
chr4 (81-131)||(30745742-30745792)
chr4 (81-131)||(36990958-36991008)
chr4 (87-133)||(37780154-37780200)
chr4 (81-131)||(37842219-37842269)
chr4 (81-131)||(47299181-47299231)
chr4 (81-131)||(50352108-50352158)
chr4 (81-131)||(50603040-50603090)
chr4 (81-131)||(55632202-55632252)
chr4 (82-131)||(25474861-25474910)
chr4 (41-70)||(37776740-37776769)
chr4 (88-133)||(51329707-51329752)
chr4 (88-133)||(55876431-55876476)
chr4 (87-131)||(4455111-4455155)
chr4 (81-133)||(13620795-13620847)
chr4 (81-133)||(29508849-29508901)
chr4 (87-131)||(38027182-38027226)
chr4 (306-342)||(40459760-40459796)
chr4 (87-131)||(50533933-50533977)
[»] chr8 (53 HSPs)
chr8 (211-344)||(21231019-21231151)
chr8 (211-342)||(42076669-42076801)
chr8 (261-346)||(9817428-9817513)
chr8 (212-346)||(24424039-24424176)
chr8 (41-131)||(19176141-19176230)
chr8 (43-133)||(8797238-8797327)
chr8 (81-133)||(5244568-5244620)
chr8 (42-131)||(33865484-33865572)
chr8 (81-131)||(11293697-11293747)
chr8 (41-131)||(51038-51127)
chr8 (41-131)||(2944215-2944304)
chr8 (41-131)||(7758852-7758941)
chr8 (41-131)||(8951371-8951460)
chr8 (41-131)||(12802616-12802704)
chr8 (41-127)||(13568851-13568937)
chr8 (41-131)||(23688107-23688197)
chr8 (41-131)||(28192118-28192207)
chr8 (41-131)||(32675700-32675789)
chr8 (41-131)||(44502625-44502713)
chr8 (41-133)||(8251874-8251965)
chr8 (43-131)||(8948294-8948381)
chr8 (41-133)||(23487069-23487160)
chr8 (88-131)||(41898439-41898482)
chr8 (41-133)||(42885059-42885150)
chr8 (81-131)||(23995621-23995671)
chr8 (81-131)||(26625837-26625887)
chr8 (81-131)||(28864450-28864500)
chr8 (41-131)||(9035482-9035571)
chr8 (41-131)||(11798610-11798699)
chr8 (41-131)||(14584074-14584163)
chr8 (41-131)||(18111918-18112007)
chr8 (41-131)||(18455725-18455814)
chr8 (41-131)||(29321237-29321326)
chr8 (41-131)||(29806166-29806254)
chr8 (41-131)||(40741270-40741359)
chr8 (41-131)||(40784896-40784984)
chr8 (41-131)||(44251064-44251153)
chr8 (41-131)||(44888685-44888774)
chr8 (86-133)||(30512816-30512863)
chr8 (88-131)||(44165412-44165455)
chr8 (81-131)||(4631496-4631546)
chr8 (81-131)||(5109925-5109975)
chr8 (81-131)||(7683506-7683556)
chr8 (81-131)||(23497772-23497822)
chr8 (302-344)||(29132449-29132491)
chr8 (81-131)||(32522786-32522836)
chr8 (81-131)||(34490561-34490611)
chr8 (81-134)||(547819-547872)
chr8 (81-134)||(23424459-23424512)
chr8 (51-133)||(35143461-35143541)
chr8 (41-69)||(17856522-17856550)
chr8 (81-125)||(31619197-31619241)
chr8 (87-131)||(41014554-41014598)
[»] scaffold0150 (1 HSPs)
scaffold0150 (212-346)||(34995-35126)
[»] scaffold0028 (1 HSPs)
scaffold0028 (212-346)||(147627-147758)
[»] chr1 (56 HSPs)
chr1 (213-346)||(13379229-13379361)
chr1 (41-131)||(17483738-17483827)
chr1 (55-128)||(50074428-50074501)
chr1 (81-131)||(9379046-9379096)
chr1 (41-131)||(1039324-1039413)
chr1 (41-131)||(1046230-1046319)
chr1 (41-131)||(11741402-11741491)
chr1 (41-131)||(15811175-15811264)
chr1 (41-131)||(23541984-23542073)
chr1 (41-131)||(25509214-25509302)
chr1 (41-131)||(32169897-32169986)
chr1 (41-131)||(38261345-38261434)
chr1 (41-131)||(39497438-39497527)
chr1 (41-131)||(45039417-45039506)
chr1 (41-131)||(49907026-49907115)
chr1 (41-131)||(50246873-50246961)
chr1 (41-131)||(52431117-52431206)
chr1 (41-133)||(1427204-1427295)
chr1 (43-131)||(8472056-8472143)
chr1 (43-131)||(21290129-21290215)
chr1 (41-133)||(27479604-27479694)
chr1 (43-131)||(41855416-41855503)
chr1 (81-131)||(10383986-10384036)
chr1 (87-133)||(19349257-19349303)
chr1 (36-131)||(30289805-30289899)
chr1 (81-131)||(39867599-39867649)
chr1 (43-131)||(44646278-44646365)
chr1 (81-131)||(49549045-49549095)
chr1 (81-131)||(50008018-50008068)
chr1 (81-131)||(52428932-52428982)
chr1 (82-131)||(2637129-2637178)
chr1 (41-131)||(9413268-9413357)
chr1 (41-131)||(21631050-21631139)
chr1 (41-131)||(38505804-38505893)
chr1 (41-131)||(41317598-41317688)
chr1 (41-131)||(52601996-52602085)
chr1 (42-131)||(5858261-5858349)
chr1 (81-133)||(15763359-15763411)
chr1 (87-131)||(39425773-39425817)
chr1 (81-131)||(4389653-4389703)
chr1 (212-255)||(24302146-24302189)
chr1 (41-133)||(23530547-23530641)
chr1 (81-131)||(30996788-30996838)
chr1 (81-131)||(31636073-31636123)
chr1 (81-131)||(34931123-34931173)
chr1 (81-131)||(45794388-45794438)
chr1 (81-131)||(50008426-50008476)
chr1 (282-342)||(37666515-37666576)
chr1 (41-131)||(39750324-39750413)
chr1 (81-133)||(6130113-6130165)
chr1 (87-131)||(18172378-18172422)
chr1 (81-133)||(41620107-41620159)
chr1 (306-342)||(43406728-43406764)
chr1 (103-131)||(46271293-46271321)
chr1 (87-131)||(47754068-47754112)
chr1 (286-346)||(51442712-51442772)
[»] chr5 (50 HSPs)
chr5 (41-131)||(41687056-41687144)
chr5 (41-131)||(14913653-14913743)
chr5 (41-131)||(23260081-23260170)
chr5 (41-131)||(7951567-7951655)
chr5 (41-131)||(32964138-32964226)
chr5 (43-131)||(31657692-31657778)
chr5 (41-131)||(1265954-1266043)
chr5 (41-131)||(3028018-3028107)
chr5 (41-131)||(9020699-9020789)
chr5 (41-131)||(9828398-9828487)
chr5 (41-131)||(22527697-22527786)
chr5 (41-131)||(34662209-34662298)
chr5 (41-131)||(39984775-39984863)
chr5 (41-131)||(40004352-40004441)
chr5 (41-131)||(8949817-8949909)
chr5 (41-133)||(18251019-18251112)
chr5 (42-131)||(32478144-32478232)
chr5 (41-133)||(13759388-13759479)
chr5 (81-131)||(11432354-11432404)
chr5 (81-131)||(16285133-16285183)
chr5 (261-346)||(18926378-18926464)
chr5 (41-128)||(21239104-21239190)
chr5 (41-131)||(3497743-3497832)
chr5 (41-131)||(7940457-7940546)
chr5 (45-131)||(14619258-14619343)
chr5 (41-131)||(15190758-15190847)
chr5 (41-131)||(19571881-19571971)
chr5 (41-131)||(20142202-20142291)
chr5 (49-131)||(26605566-26605646)
chr5 (41-131)||(41384115-41384204)
chr5 (41-131)||(14649193-14649279)
chr5 (87-131)||(25837058-25837102)
chr5 (81-128)||(10116624-10116671)
chr5 (84-131)||(28140863-28140910)
chr5 (81-128)||(30117157-30117204)
chr5 (81-128)||(37700137-37700184)
chr5 (41-133)||(4902812-4902903)
chr5 (81-131)||(10734464-10734514)
chr5 (81-131)||(13660905-13660955)
chr5 (81-131)||(14570831-14570881)
chr5 (81-131)||(21069681-21069731)
chr5 (81-131)||(24857600-24857650)
chr5 (81-131)||(28041294-28041344)
chr5 (81-131)||(31642231-31642281)
chr5 (87-133)||(34332268-34332314)
chr5 (306-342)||(537629-537665)
chr5 (81-133)||(13335332-13335384)
chr5 (87-131)||(31888943-31888987)
chr5 (81-133)||(33819256-33819308)
chr5 (306-342)||(40691685-40691721)
[»] chr6 (37 HSPs)
chr6 (41-131)||(13648072-13648161)
chr6 (41-131)||(8743193-8743281)
chr6 (41-131)||(34915486-34915575)
chr6 (81-131)||(22998988-22999038)
chr6 (81-131)||(23789366-23789416)
chr6 (41-131)||(402564-402653)
chr6 (41-131)||(9038647-9038736)
chr6 (41-131)||(34301775-34301864)
chr6 (81-133)||(28236142-28236194)
chr6 (81-131)||(18106114-18106164)
chr6 (41-131)||(23604465-23604556)
chr6 (45-131)||(2365036-2365121)
chr6 (41-131)||(9388734-9388823)
chr6 (41-131)||(13321269-13321358)
chr6 (41-131)||(13901646-13901733)
chr6 (41-131)||(33487838-33487925)
chr6 (88-131)||(8217662-8217705)
chr6 (41-133)||(23282747-23282837)
chr6 (88-131)||(27310485-27310528)
chr6 (88-131)||(29293742-29293785)
chr6 (41-133)||(31091450-31091541)
chr6 (81-131)||(20450124-20450174)
chr6 (81-131)||(22710310-22710360)
chr6 (81-131)||(28980799-28980849)
chr6 (81-131)||(29036169-29036219)
chr6 (81-131)||(31150189-31150239)
chr6 (81-131)||(34126185-34126235)
chr6 (84-133)||(8646146-8646195)
chr6 (41-131)||(23398082-23398171)
chr6 (102-131)||(27581451-27581480)
chr6 (41-131)||(32614994-32615082)
chr6 (87-131)||(344914-344958)
chr6 (81-133)||(4175286-4175338)
chr6 (87-131)||(6417925-6417969)
chr6 (306-342)||(10750990-10751026)
chr6 (81-133)||(13445999-13446051)
chr6 (306-342)||(34636996-34637032)
[»] scaffold0012 (1 HSPs)
scaffold0012 (41-131)||(47645-47734)
[»] scaffold0161 (1 HSPs)
scaffold0161 (41-131)||(3443-3531)
[»] scaffold0107 (1 HSPs)
scaffold0107 (41-131)||(48659-48749)
[»] scaffold0038 (1 HSPs)
scaffold0038 (81-133)||(36304-36356)
[»] scaffold0308 (2 HSPs)
scaffold0308 (81-131)||(5229-5279)
scaffold0308 (41-72)||(14349-14380)
[»] scaffold0294 (1 HSPs)
scaffold0294 (81-131)||(11602-11652)
[»] scaffold0236 (1 HSPs)
scaffold0236 (81-131)||(17508-17558)
[»] scaffold0009 (1 HSPs)
scaffold0009 (81-131)||(246500-246550)
[»] scaffold0097 (1 HSPs)
scaffold0097 (51-131)||(31630-31709)
[»] scaffold2116 (1 HSPs)
scaffold2116 (81-131)||(4-54)
[»] scaffold0649 (1 HSPs)
scaffold0649 (81-131)||(4241-4291)
[»] scaffold0443 (1 HSPs)
scaffold0443 (81-131)||(4724-4774)
[»] scaffold0237 (1 HSPs)
scaffold0237 (81-131)||(6553-6603)
[»] scaffold0121 (1 HSPs)
scaffold0121 (81-131)||(24573-24623)
[»] scaffold0130 (1 HSPs)
scaffold0130 (43-72)||(24224-24253)
[»] scaffold0907 (1 HSPs)
scaffold0907 (87-131)||(4518-4562)
[»] scaffold0311 (1 HSPs)
scaffold0311 (87-131)||(9609-9653)


Alignment Details
Target: chr3 (Bit Score: 229; Significance: 1e-126; HSPs: 75)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 41 - 346
Target Start/End: Complemental strand, 29454818 - 29454512
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnn-ttgtctctttttataagtctcctttggtatttccaagtacattaattatttttgtaacg 139  Q
    |||||||||||||||||||||||||||||||||        ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29454818 cctccgtccttaattataagacccttttgagataaaaaaaattgtctctttttataagtctcctttggtatttccaagtacattaattatttctgtaacg 29454719  T
Q  140 ttccggattttgatccaaagacactaggtataattctttcttttagaaaaacatggctatcttgnnnnnnncctaactagaacttaacaaaaatagttat 239  Q
    | |||||||||||||||||||||| | ||| |||||||||||||||||||||||| ||||||||       |||||||||||||||||||||||||||||    
T  29454718 tcccggattttgatccaaagacacgacgtagaattctttcttttagaaaaacatgactatcttgtttttttcctaactagaacttaacaaaaatagttat 29454619  T
Q  240 actaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatcatatcttctttggtacctaaaat 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  29454618 actaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcacacatcatatcttctttggtacctaaaat 29454519  T
Q  340 gttggtt 346  Q
    |||||||    
T  29454518 gttggtt 29454512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 11646246 - 11646382
Alignment:
Q  211 cctaactagaacttaacaaaaatagttatactaatctaattacaattcataaa-cccaaatttgtttccccgcgtacacacttcaagcacaacatcaagc 309  Q
    |||||||||| |||||||| |||||||| |||||| ||||||||||| | ||| ||||||||||||||||||||||||| ||| ||||| |||| |||||    
T  11646246 cctaactagagcttaacaacaatagttaaactaatttaattacaatttagaaaacccaaatttgtttccccgcgtacacgctttaagcaaaacaccaagc 11646345  T
Q  310 atacatcatatcttctttggtacctaaaatgttggtt 346  Q
    | ||||||||||| |||||||||||||||||||||||    
T  11646346 acacatcatatctcctttggtacctaaaatgttggtt 11646382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 19543849 - 19543933
Alignment:
Q  261 aaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatcatatcttctttggtacctaaaatgttggtt 346  Q
    ||||||||||||||| ||||  ||||||||||||| || ||||||||||| ||||||||| ||||||| |||||||||||||||||    
T  19543849 aaacccaaatttgtt-ccccatgtacacacttcaaacaaaacatcaagcacacatcatattttctttgatacctaaaatgttggtt 19543933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 1111679 - 1111591
Alignment:
Q  42 ctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||| ||||||||||||||||||||||        ||||||||||||||||| | | |||||||||||||||||||||||||||||    
T  1111679 ctccgtccctaattataagacccttttgaga-aatttttttgtctctttttataagacccttttggtatttccaagtacattaattattt 1111591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 47008534 - 47008445
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||| |||||||||        ||||| ||||||||||| | |||||||||||||||||||||||||||||||    
T  47008534 cctccgtccctaattataagacacttttgaga-aatttttttgtccctttttataagacccctttggtatttccaagtacattaattattt 47008445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 4024057 - 4024146
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||||||       ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  4024057 cctccgtccctaattataagacccttttgagattttttt-ttgtccctttttataagacccctttgttatttccaactacattaattattt 4024146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 32467431 - 32467519
Alignment:
Q  42 ctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  32467431 ctccgtccttaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 32467519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 28811107 - 28811064
Alignment:
Q  88 tttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||| |||||||||||||||||||||||||||||||||    
T  28811107 tttttataagactcctttggtatttccaagtacattaattattt 28811064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 43701183 - 43701274
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||| |||| ||||||||||||||||||||||        ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  43701183 cctctgtccctaattataagacccttttgaga-attttttttgtccctttttataagactcctttgttatttccaactacattaattattttt 43701274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 54928123 - 54928032
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||||| ||||||||||||        ||||||||||||||||  ||| ||| |||||||||||||||||||||||||||    
T  54928123 cctccatccttaattataaaacccttttgaga-aaaaaaattgtctctttttataatactcttttagtatttccaagtacattaattattttt 54928032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 34021988 - 34021938
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| |||||||||||||| ||||||||| ||||||||    
T  34021988 ttgtctctttttataagactcctttggtattttcaagtacatcaattattt 34021938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 36005547 - 36005597
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  36005547 ttgtctctttttataagactcctttgttatttccaactacattaattattt 36005597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 48904256 - 48904206
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  48904256 ttgtccctttttataagactcttttggtatttccaagtacattaattattt 48904206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 7181355 - 7181444
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  7181355 cctccgtccctaattataagacccttttgaga-aatttttttgtccctttttataagacccctttgctatttccaactacattaattattt 7181444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 8321930 - 8322019
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  8321930 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 8322019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 8546909 - 8546998
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| | | |||| ||||||||| ||||||||||||||    
T  8546909 cctccgtccttaattataagacccttttgaga-attttttttgtccctttttataagacccatttgttatttccaactacattaattattt 8546998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 9499529 - 9499440
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  9499529 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 9499440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 10220938 - 10221026
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| || ||||| ||||||||| ||||||||||||||    
T  10220938 cctccgtccctaattataagacccttttgaga--atttttttgtccctttttataagacttctttgctatttccaactacattaattattt 10221026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 22103961 - 22103872
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  22103961 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 22103872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 27646338 - 27646249
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        ||||||||||||||||| | | |||||||||| ||||||||||||||||||    
T  27646338 cctccgtccctaattataagatccttttgaga-aatttttttgtctctttttataagacccttttggtattttcaagtacattaattattt 27646249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 27687991 - 27688080
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||||||||||||||| |        ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  27687991 cctccgtccttaattataagacccttttgaca-aatttttttgtccctttttataagactcatttgctatttccaactacattaattattt 27688080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 29719742 - 29719654
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        || |||||||||||||  | | |||||||||||||||||||||||||||||    
T  29719742 cctccgtccataattataagacccttttgaga--aaaaaattatctctttttataaaacccatttggtatttccaagtacattaattattt 29719654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 30819883 - 30819972
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||| ||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||||||||||||||||||    
T  30819883 cctccgtccctaactataagacccttttgaga-aaaaaaattgtccctttttataagacccctttgatatttccaagtacattaattattt 30819972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 37728718 - 37728807
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  37728718 cctccgtccctaattataagacccttttgaga-atatttgttgtccctttttataagacccctttgttatttccaactacattaattattt 37728807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 44543787 - 44543876
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  44543787 cctccgtccctaattataagacccttttgaga-atttcttttgtccctttttataagacccctttgttatttccaactacattaattattt 44543876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 46878471 - 46878382
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| | |||||  ||||||||| ||||||||||||||    
T  46878471 cctccgtccttaattataagacccttttgaga-aatttttttgtccctttttataagacccctttattatttccaactacattaattattt 46878382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 31186764 - 31186852
Alignment:
Q  42 ctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  31186764 ctccgtccttaattataagacccttttgaaa-aaaaaaattgtccctttttataagacccctttgctatttccaactacattaattattt 31186852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 44561683 - 44561639
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||||||||||||||||||||||||||||    
T  44561683 ctttttataagacccctttggtatttccaagtacattaattattt 44561639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 300 - 346
Target Start/End: Original strand, 9013628 - 9013675
Alignment:
Q  300 aacatcaag-catacatcatatcttctttggtacctaaaatgttggtt 346  Q
    ||||||||| |||||||||||| |||||||||||||||||||||||||    
T  9013628 aacatcaagacatacatcatatgttctttggtacctaaaatgttggtt 9013675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 16776880 - 16776833
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaatta 128  Q
    ||||||||||||||||| | |||||| |||||||||||||||||||||    
T  16776880 ttgtctctttttataagacccctttgctatttccaagtacattaatta 16776833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 20862203 - 20862290
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  20862203 tccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 20862290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 25148466 - 25148553
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  25148466 tccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 25148553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 35868115 - 35868024
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||| ||| ||||||||||||||||    
T  35868115 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttattttcaactacattaattattttt 35868024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 45404382 - 45404469
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| |||||||||||||||||||| |        ||||||||||||||||| | | |||||| ||||||||||||||||||||||    
T  45404382 tccgtccctaattataagacccttttgaaa-aaataatttgtctctttttataagacccatttggtgtttccaagtacattaattattt 45404469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 82 - 133
Target Start/End: Complemental strand, 48902700 - 48902649
Alignment:
Q  82 tgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||| ||||||||||| | | |||||||||||||||||||||||||||||||    
T  48902700 tgtccctttttataagacccttttggtatttccaagtacattaattattttt 48902649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 49543684 - 49543771
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  49543684 tccgtccctaattataagacccttttgaga-aaatttgttgtccctttttataagactcttttgctatttccaactacattaattattt 49543771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 50647976 - 50647885
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||  ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||||    
T  50647976 cctccgtctctaattataagacccttttgaga-aaaaattttgtccctttttataagacccctttgttatttccaactacattaattattttt 50647885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 9780232 - 9780182
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  9780232 ttgtccctttttataagactcctttgttatttccaactacattaattattt 9780182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 17589869 - 17589819
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||||||||| ||||||||||||||||||    
T  17589869 ttgtccctttttataagactcatttggtattttcaagtacattaattattt 17589819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 20656303 - 20656253
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| | |||||| ||||||||| ||||||||||||||    
T  20656303 ttgtctctttttataagacccctttgttatttccaactacattaattattt 20656253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 10015821 - 10015732
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  10015821 cctccgtccctaattataagacccttttgaaa-aaaaaaattgtccctttttataagacccctttgctatttccaactacattaattattt 10015732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 15996805 - 15996716
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  15996805 cctccgtccctaattataagacccttttgaaa-aaaaaatttgtccctttttataagacccctttgctatttccaactacattaattattt 15996716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 23700817 - 23700728
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  23700817 cctccgtccctaattataagacctttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 23700728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 23719272 - 23719183
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  23719272 cctccgtccctaattataagacctttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 23719183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 23737728 - 23737639
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  23737728 cctccgtccctaattataagacctttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 23737639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 43978165 - 43978254
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||| |||        ||||||||||||||||| ||  |||| ||||||||| ||||||||||||||    
T  43978165 cctccgtccctaattataagacccttttaaga-attttttttgtctctttttataagacttatttgctatttccaactacattaattattt 43978254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 45324119 - 45324030
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||| ||||||||        || || ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  45324119 cctccgtccttaattataagaccattttgaga-attttttttatccctttttataagacccctttgctatttccaactacattaattattt 45324030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 49127230 - 49127141
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| |||||||| ||||||||| |||| |||||||||    
T  49127230 cctccgtccctaattataagacctttttgaga-attttttttgtccctttttataagactcctttgttatttccaactacaataattattt 49127141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 54782945 - 54782860
Alignment:
Q  45 cgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  54782945 cgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 54782860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 31541071 - 31541119
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattat 129  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||||||||    
T  31541071 ttgtccctttttataagacccctttggtgtttccaagtacattaattat 31541119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 72
Target Start/End: Original strand, 6784468 - 6784499
Alignment:
Q  41 cctccgtccttaattataagacccttttgaga 72  Q
    ||||||||||||||||||||||||||||||||    
T  6784468 cctccgtccttaattataagacccttttgaga 6784499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 37 - 72
Target Start/End: Complemental strand, 22527657 - 22527622
Alignment:
Q  37 actgcctccgtccttaattataagacccttttgaga 72  Q
    |||| |||||||||||||||||||||||||||||||    
T  22527657 actgactccgtccttaattataagacccttttgaga 22527622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 32569004 - 32569091
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||| ||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  32569004 tccgtccctaattataaaacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaattacattaattattt 32569091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 36730051 - 36730098
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaatta 128  Q
    ||||||||||||||||| | |||||| |||||||||||| ||||||||    
T  36730051 ttgtctctttttataaggcccctttgatatttccaagtatattaatta 36730098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 7251275 - 7251225
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  7251275 ttgtccctttttataagactcatttgttatttccaactacattaattattt 7251225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 16435230 - 16435180
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  16435230 ttgtccctttttataagacccctttgttatttccaactacattaattattt 16435180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 330
Target Start/End: Complemental strand, 17403987 - 17403925
Alignment:
Q  268 aatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatcatatcttctttggt 330  Q
    ||||||||||||| |||| |  ||||| ||| ||||||||||| |||| ||||||||||||||    
T  17403987 aatttgtttccccacgtataggcttcaggcaaaacatcaagcacacattatatcttctttggt 17403925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 17591538 - 17591488
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  17591538 ttgtccctttttataagacccctttgttatttccaactacattaattattt 17591488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 20621677 - 20621627
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  20621677 ttgtccctttttataagacccctttgctatttccaactacattaattattt 20621627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 89 - 131
Target Start/End: Original strand, 25130702 - 25130744
Alignment:
Q  89 ttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||| ||||| ||||||||| ||||||||||||||    
T  25130702 ttttataagtcttctttgttatttccaattacattaattattt 25130744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 32969218 - 32969168
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| |||||||||||   |||||||| ||||||||||||||||||||||    
T  32969218 ttgtccctttttataagatccctttggtgtttccaagtacattaattattt 32969168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 36317648 - 36317598
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  36317648 ttgtccctttttataagactcatttgctatttccaactacattaattattt 36317598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 36584754 - 36584804
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||  |||||| ||||||||||||||||||||||    
T  36584754 ttgtccctttttataagacttatttggtgtttccaagtacattaattattt 36584804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 42755385 - 42755435
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| |   |||||||||||||| ||||||||||||||    
T  42755385 ttgtctctttttataagacctttttggtatttccaaatacattaattattt 42755435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 45513628 - 45513578
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  45513628 ttgtccctttttataagacccctttgctatttccaactacattaattattt 45513578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 45745822 - 45745872
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  45745822 ttgtccctttttataagacccctttgttatttccaactacattaattattt 45745872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 52693681 - 52693631
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |   |||||||||||||||||||||||||||||    
T  52693681 ttgtccctttttataagaccattttggtatttccaagtacattaattattt 52693631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 12683214 - 12683125
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        | ||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  12683214 cctccgtccctaattataagaccattttgaga-atttttttagtccctttttataagacccctttgttatttccaactacattaattattt 12683125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 70
Target Start/End: Original strand, 33360890 - 33360919
Alignment:
Q  41 cctccgtccttaattataagacccttttga 70  Q
    ||||||||||||||||||||||||||||||    
T  33360890 cctccgtccttaattataagacccttttga 33360919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 70
Target Start/End: Complemental strand, 54604620 - 54604591
Alignment:
Q  41 cctccgtccttaattataagacccttttga 70  Q
    ||||||||||||||||||||||||||||||    
T  54604620 cctccgtccttaattataagacccttttga 54604591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 16976163 - 16976127
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  16976163 aagcatagatcatctcttctttggtacctaaaatgtt 16976127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 43158729 - 43158677
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| |||||||||||   |||||| ||||||||| ||||||||||||||||    
T  43158729 ttgtccctttttataagatccctttgctatttccaactacattaattattttt 43158677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 73
Target Start/End: Complemental strand, 44542505 - 44542473
Alignment:
Q  41 cctccgtccttaattataagacccttttgagat 73  Q
    ||||||||| |||||||||||||||||||||||    
T  44542505 cctccgtccctaattataagacccttttgagat 44542473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 46403961 - 46403997
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  46403961 aagcatagatcatctcttctttggtacctaaaatgtt 46403997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 52291414 - 52291370
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  52291414 ctttttataagactcatttgctatttccaactacattaattattt 52291370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 120; Significance: 2e-61; HSPs: 61)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 142 - 346
Target Start/End: Complemental strand, 9746263 - 9746061
Alignment:
Q  142 ccggattttgatccaaagacactaggtataattctttcttttagaaaaacatggctatcttgnnnnnnncctaactagaacttaacaaaaatagttatac 241  Q
    ||||||||| |||||| |||| || || ||||||||||||| ||||||||||| |||||||        |||||||||||||||||||||||||||||||    
T  9746263 ccggattttaatccaa-gacattatgtctaattctttctttaagaaaaacatgactatctt-ttttttccctaactagaacttaacaaaaatagttatac 9746166  T
Q  242 taatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatcatatcttctttggtacctaaaatgt 341  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||| | ||||||| ||| ||||||||||| ||||||||||||||||||    
T  9746165 taatctaattacaattcataaacccaaatttgtttccccgcgtacacgcttcaagaaaaacatcatgcaaacatcatatctcctttggtacctaaaatgt 9746066  T
Q  342 tggtt 346  Q
    |||||    
T  9746065 tggtt 9746061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 214 - 346
Target Start/End: Complemental strand, 31212184 - 31212060
Alignment:
Q  214 aactagaacttaacaaaaatagttatactaatctaattacaattc-ataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcata 312  Q
    |||||||||||||||||||| |||| |||||||||||||||||||   |||||||||||||||||| |||||         | ||| ||||||||||| |    
T  31212184 aactagaacttaacaaaaatggttaaactaatctaattacaattcggaaaacccaaatttgtttcctcgcgt---------aggcaaaacatcaagcaca 31212094  T
Q  313 catcatatcttctttggtacctaaaatgttggtt 346  Q
    |||||||||| |||||||||||||||||||||||    
T  31212093 catcatatctcctttggtacctaaaatgttggtt 31212060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 269 - 346
Target Start/End: Original strand, 46001937 - 46002015
Alignment:
Q  269 atttgtttcccc-gcgtacacacttcaagcacaacatcaagcatacatcatatcttctttggtacctaaaatgttggtt 346  Q
    |||||||||||| |||||||| ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||||||    
T  46001937 atttgtttcccccgcgtacacgcttcaagcaaaacatcaagcacacatcatatctcctttggtacctaaaatgttggtt 46002015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 13170346 - 13170260
Alignment:
Q  261 aaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatc-atatcttctttggtacctaaaatgttggtt 346  Q
    ||||| ||||||||||||||||||||||| |||||||| || ||||||||||| ||  ||||| |||||||||||||||||||||||    
T  13170346 aaaccaaaatttgtttccccgcgtacacatttcaagcaaaatatcaagcatacgtcgttatctcctttggtacctaaaatgttggtt 13170260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 34012549 - 34012461
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| ||| |||| ||||||||||||||||||||||||    
T  34012549 cctccgtccctaattataagacccttttgaga--atttttttgtccctttttataagactcttttgctatttccaagtacattaattattt 34012461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 33381605 - 33381517
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||||||       ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  33381605 cctccgtccctaattataagacccttttgagatttttt--ttgtccctttttataagacccctttgctatttccaactacattaattattt 33381517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 19845701 - 19845612
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        |||||  |||||||||| | |||||||||||||||||||||||||||||||    
T  19845701 cctccgtccctaattataagatccttttgaga-aaaaaatttgtccttttttataagacccctttggtatttccaagtacattaattattt 19845612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 31458002 - 31458091
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  31458002 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 31458091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 38858303 - 38858392
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  38858303 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 38858392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 39871645 - 39871556
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  39871645 cctccgtccctaattataagacccttttgaga-aatttttttgtccctttttataagacccctttgttatttccaactacattaattattt 39871556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 41252393 - 41252304
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  41252393 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaattacattaattattt 41252304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 24504734 - 24504778
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| ||| |||||||||||||||||||||||||||||    
T  24504734 ctttttataagactcttttggtatttccaagtacattaattattt 24504778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 40300235 - 40300324
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||||||       ||||| ||||||||||| | |||||| ||||| ||| ||||||||||||||    
T  40300235 cctccgtccctaattataagacccttttgagat-ttttttttgtccctttttataagacccctttgttattttcaactacattaattattt 40300324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 11647864 - 11647777
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  11647864 tccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 11647777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 45 - 133
Target Start/End: Original strand, 26736488 - 26736576
Alignment:
Q  45 cgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||| ||||||||||||||||||||        ||||| ||||||||||| ||| |||| ||||| ||| ||||||||||||||||    
T  26736488 cgtccttgattataagacccttttgagaatttttttttgtccctttttataagactcatttgttattttcaactacattaattattttt 26736576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 7400172 - 7400222
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  7400172 ttgtccctttttataagactcctttgctatttccaactacattaattattt 7400222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 42 - 133
Target Start/End: Complemental strand, 9140564 - 9140474
Alignment:
Q  42 ctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||||||| ||||||||||||||||||||||        ||||| ||||||||||| ||| |||  ||||||||| ||||||||||||||||    
T  9140564 ctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagactcattttctatttccaactacattaattattttt 9140474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 9682646 - 9682696
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  9682646 ttgtccctttttataagacccctttggtgtttccaagtacattaattattt 9682696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30534749 - 30534799
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||| ||||||||||||||||||    
T  30534749 ttgtccctttttataagactcctttgatattttcaagtacattaattattt 30534799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 32699697 - 32699647
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||||||||||||||||||    
T  32699697 ttgtccctttttataagacccctttgatatttccaagtacattaattattt 32699647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 32964388 - 32964338
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| |||||||||||  ||||||||||||| ||||||||||||||||||    
T  32964388 ttgtccctttttataagagtcctttggtattttcaagtacattaattattt 32964338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 84 - 130
Target Start/End: Complemental strand, 40121248 - 40121202
Alignment:
Q  84 tctctttttataagtctcctttggtatttccaagtacattaattatt 130  Q
    |||||||||||||| | ||||| ||||||||||||||||||||||||    
T  40121248 tctctttttataagacccctttagtatttccaagtacattaattatt 40121202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 42888073 - 42888023
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | ||||||||||| |||||||||||||||||||    
T  42888073 ttgtcactttttataagacccctttggtattaccaagtacattaattattt 42888023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 44510336 - 44510286
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||||||||||||||||||    
T  44510336 ttgtccctttttataagacccctttgatatttccaagtacattaattattt 44510286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 1574764 - 1574813
Alignment:
Q  82 tgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  1574764 tgtccctttttataagactcctttgctatttccaactacattaattattt 1574813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 3388268 - 3388184
Alignment:
Q  261 aaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatcatatcttctttggtacctaaaatgttggtt 346  Q
    |||||||||||| |||||||||  || | |||||| || || | |||||| | |||||| ||||||||||||||||||||||||||    
T  3388268 aaacccaaatttatttccccgcaaacgcgcttcaaacaaaata-caagcacatatcataacttctttggtacctaaaatgttggtt 3388184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 17317446 - 17317535
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  17317446 cctccgtccctaattataagatccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 17317535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 19292844 - 19292932
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        ||||| ||||||||||| | ||||| ||||||| |||||||||||||||||    
T  19292844 cctccgtccctaattataagatccttttgaga--aaaaaattgtccctttttataagacccctttagtatttctaagtacattaattattt 19292932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 19920568 - 19920657
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||  ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  19920568 cctccgtccctaattataagacccttttgaga-attttttttgttcctttttataagacccctttgctatttccaactacattaattattt 19920657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 25247722 - 25247634
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||| |||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  25247722 cctccgtccctaattataagactcttttgaga--atttttttgtccctttttataagacccctttgttatttccaactacattaattattt 25247634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 35569683 - 35569595
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||||||||||||||| |        |||||  |||||||||| | |||||| ||||||||| ||||||||||||||    
T  35569683 cctccgtccttaattataagacccttttgaaa--aaaaaattgtccttttttataagacccctttgctatttccaactacattaattattt 35569595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 36646669 - 36646580
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||| |||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  36646669 cctccgtccctaattagaagacccttttgaga-attctttttgtccctttttataagacccctttgttatttccaactacattaattattt 36646580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 36711330 - 36711241
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| | ||||||||||||||||||||||        || || ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  36711330 cctccgttcctaattataagacccttttgagaattatttttt-tccctttttataagactcctttgttatttccaactacattaattattt 36711241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 41003186 - 41003097
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| |||||||||||   | |||| ||||||||| ||||||||||||||    
T  41003186 cctccgtccttaattataagacccttttgaga-attttttttgtccctttttataagatccatttgttatttccaactacattaattattt 41003097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 17491559 - 17491611
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||||    
T  17491559 ttgtccctttttataagacccctttgttatttccaactacattaattattttt 17491611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 17561655 - 17561603
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||||    
T  17561655 ttgtccctttttataagacccctttgttatttccaactacattaattattttt 17561603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 28060724 - 28060811
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||        ||  | ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  28060724 tccgtccttaattataagacccttttgagaatttttttttacccctttttataagac-cctttgttatttccaactacattaattattt 28060811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 41444217 - 41444296
Alignment:
Q  51 taattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  41444217 taattataagacccttttgaga-aatttttttgtcactttttataagacccctttgctatttccaactacattaattattt 41444296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 8782206 - 8782156
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||||| ||||||| ||||||||||||||    
T  8782206 ttgtccctttttataagacccctttggtgtttccaaatacattaattattt 8782156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 9036922 - 9036872
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  9036922 ttgtccctttttataagacccctttgttatttccaactacattaattattt 9036872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 9233569 - 9233519
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  9233569 ttgtccctttttataagactcatttgctatttccaactacattaattattt 9233519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 9299141 - 9299191
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||||| |||||| ||||| ||| ||||||||||||||    
T  9299141 ttgtccctttttataagtcccctttgctattttcaactacattaattattt 9299191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 9303690 - 9303740
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||||| |||||| ||||| ||| ||||||||||||||    
T  9303690 ttgtccctttttataagtcccctttgctatttacaactacattaattattt 9303740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 85 - 131
Target Start/End: Original strand, 10475749 - 10475795
Alignment:
Q  85 ctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||| | |||||| ||||||||| ||||||||||||||    
T  10475749 ctctttttataagacccctttgctatttccaactacattaattattt 10475795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 20074933 - 20074983
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  20074933 ttgtccctttttataagacccctttgttatttccaactacattaattattt 20074983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 29064450 - 29064400
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  29064450 ttgtccctttttataagacccctttgttatttccaactacattaattattt 29064400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 31200357 - 31200307
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  31200357 ttgtccctttttataagacccctttgttatttccaactacattaattattt 31200307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 32643748 - 32643698
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |   |||||||||||||||||||||||||||||    
T  32643748 ttgtccctttttataagacatatttggtatttccaagtacattaattattt 32643698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 32759602 - 32759652
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  32759602 ttgtccctttttataagacccctttgttatttccaactacattaattattt 32759652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 43934635 - 43934685
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |  ||||||| ||||||||||||||||||||||    
T  43934635 ttgtccctttttataagacatctttggtgtttccaagtacattaattattt 43934685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 49045113 - 49045063
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |  ||||| ||||||||||||||||||||||||    
T  49045113 ttgtccctttttataagacctctttgatatttccaagtacattaattattt 49045063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 7703852 - 7703763
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||||||  |||||||||        || || ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  7703852 cctccgtccttaattataagattcttttgaga-attttttttatccctttttataagacccctttgttatttccaactacattaattattt 7703763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 44 - 73
Target Start/End: Complemental strand, 24211177 - 24211148
Alignment:
Q  44 ccgtccttaattataagacccttttgagat 73  Q
    ||||||||||||||||||||||||||||||    
T  24211177 ccgtccttaattataagacccttttgagat 24211148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 100 - 133
Target Start/End: Complemental strand, 40299290 - 40299257
Alignment:
Q  100 tcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||||||| ||||||||||||||||||||    
T  40299290 tcctttggtattttcaagtacattaattattttt 40299257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 787977 - 788029
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| ||| |||| ||||||||| || |||||||||||||    
T  787977 ttgtccctttttataagactcatttgctatttccaactatattaattattttt 788029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 2006525 - 2006569
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  2006525 ctttttataaggctcatttgttatttccaactacattaattattt 2006569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 10288152 - 10288188
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  10288152 aagcatagatcatctcttctttggtacctaaaatgtt 10288188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 15873337 - 15873373
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  15873337 aagcatagatcatctcttctttggtacctaaaatgtt 15873373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 23919782 - 23919826
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  23919782 ctttttataagactcttttgttatttccaactacattaattattt 23919826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 45907289 - 45907341
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| | |||||  ||||||||| ||||||||||||||||    
T  45907289 ttgtccctttttataagacccctttattatttccaactacattaattattttt 45907341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 46148475 - 46148527
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||| ||||||| | |||||| ||||||||||| ||||||||| ||||    
T  46148475 ttgtctcttattataagacccctttgttatttccaagtgcattaattaatttt 46148527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 77; Significance: 1e-35; HSPs: 68)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 211 - 343
Target Start/End: Original strand, 16130232 - 16130364
Alignment:
Q  211 cctaactagaacttaacaaaaatagttatactaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagca 310  Q
    ||||| ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||| ||||||||||| |||||| ||||||  | |||||||||||    
T  16130232 cctaagtagaacttaacaaaaatagttattctaatctaattacaattcaaaaaccaaaacttgtttccccgggtacacgcttcaatgaaaacatcaagca 16130331  T
Q  311 tacatcatatcttctttggtacctaaaatgttg 343  Q
    || ||||| ||||||  ||||||||||||||||    
T  16130332 tatatcatctcttctcaggtacctaaaatgttg 16130364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 217 - 339
Target Start/End: Complemental strand, 16331062 - 16330940
Alignment:
Q  217 tagaacttaacaaaaatagttatactaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatc 316  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||||||||| |||||| ||||||  | ||||||||||| | |||    
T  16331062 tagaacttaacaaaaatagttattctaatctaattacaattcaaaaacccaaacttgtttccccgggtacacgcttcaatgaaaacatcaagcacatatc 16330963  T
Q  317 atatcttctttggtacctaaaat 339  Q
    || |||| |  ||||||||||||    
T  16330962 atctcttatgaggtacctaaaat 16330940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 261 - 346
Target Start/End: Complemental strand, 22404750 - 22404664
Alignment:
Q  261 aaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatca-tatcttctttggtacctaaaatgttggtt 346  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  22404750 aaacccaattttgtttccccgcgtacacacttcaagcaaaacatcaagcatacatcattatctcctttggtacctaaaattttggtt 22404664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 213 - 346
Target Start/End: Original strand, 27976301 - 27976434
Alignment:
Q  213 taactagaacttaacaaaaat-agttatactaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcat 311  Q
    |||||||||| ||||| |||| | ||| |||||| ||||||||||||| || ||||||||||||| || |||||||| | |||| || |||||| ||||     
T  27976301 taactagaacataacagaaattaattaaactaatttaattacaattcaaaaccccaaatttgttttcc-gcgtacacgcatcaatcaaaacatctagcac 27976399  T
Q  312 acatcatatcttctttggtacctaaaatgttggtt 346  Q
    ||||||| |||||||||||||||||||||||||||    
T  27976400 acatcatctcttctttggtacctaaaatgttggtt 27976434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 213 - 346
Target Start/End: Original strand, 28062829 - 28062962
Alignment:
Q  213 taactagaacttaacaaaaat-agttatactaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcat 311  Q
    |||||||||| ||||| |||| | ||| |||||| ||||||||||||| || ||||||||||||| || |||||||| | |||| || |||||| ||||     
T  28062829 taactagaacataacagaaattaattaaactaatttaattacaattcaaaaccccaaatttgttttcc-gcgtacacgcatcaatcaaaacatctagcac 28062927  T
Q  312 acatcatatcttctttggtacctaaaatgttggtt 346  Q
    ||||||| |||||||||||||||||||||||||||    
T  28062928 acatcatctcttctttggtacctaaaatgttggtt 28062962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 29045687 - 29045772
Alignment:
Q  261 aaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatcatatcttctttggtacctaaaatgttggtt 346  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||| |||| ||||  ||| |||||||||||||||||||||||    
T  29045687 aaacccatatttgtttccccgcgtacacacttcaagcaaaacatcaaacatagatcaagtctcctttggtacctaaaatgttggtt 29045772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 1859554 - 1859642
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||        ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  1859554 tccgtccttaattataagacccttttgagaatttttttttgtccctttttataagactcatttgctatttccaactacattaattattt 1859642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 8841689 - 8841600
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  8841689 cctccgtccttaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 8841600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 9701075 - 9701164
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||||||||||||||| |        ||||| ||||||||||| | | |||||||||||||||||||||||||||||    
T  9701075 cctccgtccttaattataagacccttttgaaa-aaataatttgtccctttttataagacccttttggtatttccaagtacattaattattt 9701164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 23788974 - 23789063
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  23788974 cctccgtccttaattataagacccttttgaga-aatttttttgtccctttttataagacccctttgttatttccaactacattaattattt 23789063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 31633880 - 31633790
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| || |||||||||||||||||||        ||||| ||||||||||| | ||||| |||||||||||||||||||||||||    
T  31633880 cctccgtccctagttataagacccttttgagaaaaaaaaattgtccctttttataagaccccttttgtatttccaagtacattaattattt 31633790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 51 - 133
Target Start/End: Original strand, 41834420 - 41834502
Alignment:
Q  51 taattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||||||||||||| |||||||        ||||||||||||||||| |||||||| ||||||||| ||||||||||||||||    
T  41834420 taattataagacccctttgagaatttttttttgtctctttttataagactcctttgctatttccaactacattaattattttt 41834502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 2438230 - 2438319
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  2438230 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 2438319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 7491849 - 7491938
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  7491849 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagactcatttgttatttccaactacattaattattt 7491938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 8912906 - 8912817
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  8912906 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 8912817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 11865321 - 11865231
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||| |||||||||        ||||||||||||||||| | |||||  ||||||||| ||||||||||||||    
T  11865321 cctccgtccctaattataagactcttttgagaatttttttttgtctctttttataagaccccttttctatttccaactacattaattattt 11865231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 15404739 - 15404650
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||| ||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  15404739 cctccgtccttaattgtaagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 15404650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 20252215 - 20252304
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  20252215 cctccgtccctaattataagacccttttgaga-atttcttttgtcactttttataagacccctttgttatttccaattacattaattattt 20252304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 22182956 - 22182866
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||  |||       ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  22182956 cctccgtccctaattataagacccttttatgattttttttttgtccctttttataagacccctttgttatttccaactacattaattattt 22182866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 27560211 - 27560300
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  27560211 cctccgtccctaattataagacccttttgaga-aaaatttttgtccctttttataagacccctttgttatttccaactacattaattattt 27560300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 34883880 - 34883791
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  34883880 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 34883791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 42629376 - 42629466
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  42629376 cctccgtccctaattataagacccttttgaaaaaaaaattttgtccctttttataagacccctttgttatttccaactacattaattattt 42629466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 44573914 - 44573826
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| |  ||||| ||||||||| ||||||||||||||    
T  44573914 cctccgtccttaattataagacccttttgaga--atttttttgtccctttttataagacctctttgctatttccaactacattaattattt 44573826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 30830335 - 30830283
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| || ||||||| ||||||||||||||||||||||||    
T  30830335 ttgtccctttttataagacttctttggtgtttccaagtacattaattattttt 30830283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 131
Target Start/End: Original strand, 1943589 - 1943668
Alignment:
Q  51 taattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||        ||||||||||||||||| | |||||| ||||||||| ||||||||||||||    
T  1943589 taattataagacccttttgaga-attttttttgtctctttttataagacccctttgttatttccaactacattaattattt 1943668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 34113538 - 34113625
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  34113538 tccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 34113625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 2200023 - 2200073
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| | |||||| ||||||||| ||||||||||||||    
T  2200023 ttgtctctttttataagacccctttgctatttccaactacattaattattt 2200073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30857982 - 30858032
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| ||||||||||||| |||||||||||||||    
T  30857982 ttgtccctttttataagactcttttggtatttccatgtacattaattattt 30858032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 32712777 - 32712727
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  32712777 ttgtccctttttataagactcctttgctatttccaactacattaattattt 32712727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 40544368 - 40544418
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||| ||||||||||||||||||||||||    
T  40544368 ttgtccctttttataagactcatttgatatttccaagtacattaattattt 40544418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 4408810 - 4408721
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||| ||||||||        |||||||||||||||||    |||||||||||||||||| |||||||||||    
T  4408810 cctccgttcttaattataagacctttttgaga-aatatttttgtctctttttataagatatctttggtatttccaagtagattaattattt 4408721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 4711733 - 4711821
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||| |||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  4711733 cctccgtccctaattaaaagacccttttgaga--atttttttgtccctttttataaggcccctttgttatttccaactacattaattattt 4711821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 5664643 - 5664732
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  5664643 cctccgtccctaattataagacctttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 5664732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 10758010 - 10757921
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  10758010 cctccgtccctaattataagacc-ttttgagaatttttttttgtccctttttataagacccctttgttatttccaactacattaattattt 10757921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 12890240 - 12890151
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  12890240 cctccgtccctaattataagacccttttgaaa-aaaaaatttgtccctttttataagacccctttgctatttccaactacattaattattt 12890151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 15228181 - 15228092
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  15228181 cctccgtccctaattataagatccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 15228092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 16805823 - 16805734
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  16805823 cctccgtccctaattataagatccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 16805734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 16845104 - 16845016
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  16845104 cctccgtccctaattataagatccttttgaga--atttttttgtccctttttataagacccctttgttatttccaactacattaattattt 16845016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 25624738 - 25624826
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  25624738 cctccgtccctaattataagacctttttgaga--atttttttgtccctttttataagacccctttgttatttccaactacattaattattt 25624826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 28566156 - 28566245
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||  ||||||||||| ||| |||||||||| ||| ||||||||||||||    
T  28566156 cctccgtccctaattataagacccttttgaga-aaaaaaattgttcctttttataagactcatttggtattttcaaatacattaattattt 28566245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 31751074 - 31751163
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||| ||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  31751074 cctccgtccctaattataagacccttttgtga-aatttttttgtccctttttataagacccctttgctatttccaactacattaattattt 31751163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 41422517 - 41422606
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||  ||| |||||||||| ||||||||||||||||||    
T  41422517 cctccgtccctaattataagacccttttgaaa-aaataatttgtccctttttataaaactcttttggtattttcaagtacattaattattt 41422606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 41494654 - 41494565
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||  ||| |||||||||| ||||||||||||||||||    
T  41494654 cctccgtccctaattataagacccttttgaaa-aaataatttgtccctttttataaaactcttttggtattttcaagtacattaattattt 41494565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 44436853 - 44436764
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||| |||||||||||||||||        ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  44436853 cctccgtccctaatgataagacccttttgaga-aaattttttgtccctttttataagactcatttgctatttccaattacattaattattt 44436764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 16108468 - 16108416
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||||    
T  16108468 ttgtccctttttataagacccctttgttatttccaactacattaattattttt 16108416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 17665529 - 17665618
Alignment:
Q  42 ctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||| ||||||||||||| ||||||||        || || ||||||||||| |||||||| ||||| ||| ||||||||||||||    
T  17665529 ctccgtccctaattataagacctttttgagaattttcttttatccctttttataagactcctttgttattttcaactacattaattattt 17665618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 12296422 - 12296375
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaatta 128  Q
    ||||||||||||||||| |  ||||| |||||||||||||||||||||    
T  12296422 ttgtctctttttataagacatctttgatatttccaagtacattaatta 12296375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 20727880 - 20727801
Alignment:
Q  51 taattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  20727880 taattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 20727801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 24300373 - 24300294
Alignment:
Q  51 taattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  24300373 taattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 24300294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 36750914 - 36750827
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| |||||||||||||||||||| |        ||||| ||||||||||| |  ||||| ||||||||||||||||||||||||    
T  36750914 tccgtccctaattataagacccttttgaaa-aaataatttgtccctttttataagacctctttgatatttccaagtacattaattattt 36750827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 37229447 - 37229534
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  37229447 tccgtccctaattataagaccattttgaga-atttcttttgtccctttttataagacccctttgttatttccaactacattaattattt 37229534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 1359835 - 1359885
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  1359835 ttgtccctttttataagacccctttgttatttccaactacattaattattt 1359885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 2788330 - 2788280
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |  ||||||||||||||||||||||| ||||||    
T  2788330 ttgtccctttttataagaccactttggtatttccaagtacattacttattt 2788280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 9698134 - 9698084
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  9698134 ttgtccctttttataagacccctttgttatttccaactacattaattattt 9698084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 12619851 - 12619901
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||  ||| |||| ||||||||||||||||||||||||    
T  12619851 ttgtccctttttataaaactcttttgctatttccaagtacattaattattt 12619901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 15918072 - 15918022
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  15918072 ttgtccctttttataagactcatttgctatttccaactacattaattattt 15918022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 18374695 - 18374645
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||  ||||||||| ||||||||||||||    
T  18374695 ttgtccctttttataagactccttttctatttccaactacattaattattt 18374645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 20643526 - 20643576
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  20643526 ttgtccctttttataagacccctttgttatttccaactacattaattattt 20643576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 34432193 - 34432143
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| | ||||||||||||||||||||||    
T  34432193 ttgtccctttttataagacccctttgatgtttccaagtacattaattattt 34432143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 39833992 - 39833942
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  39833992 ttgtccctttttataagacccctttgttatttccaactacattaattattt 39833942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 40789081 - 40789031
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  40789081 ttgtccctttttataagacccctttgctatttccaactacattaattattt 40789031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 41003987 - 41004037
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  41003987 ttgtccctttttataagacccctttgctatttccaactacattaattattt 41004037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 13215806 - 13215762
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | | |||| ||||||||||||||||||||||||    
T  13215806 ctttttataagacccttttgatatttccaagtacattaattattt 13215762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 13336742 - 13336698
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||  ||||||| ||||||||| ||||||||||||||    
T  13336742 ctttttataagattcctttgttatttccaactacattaattattt 13336698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 15435869 - 15435817
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| | | |||| ||||||||| ||||||||||||||||    
T  15435869 ttgtccctttttataagacccttttgttatttccaactacattaattattttt 15435817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 18292104 - 18292140
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  18292104 aagcataaatcatctcttctttggtacctaaaatgtt 18292140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 30466154 - 30466198
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  30466154 ctttttataagacccctttgctatttccaactacattaattattt 30466198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 129
Target Start/End: Original strand, 45151792 - 45151840
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattat 129  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||    
T  45151792 ttgtccctttttataagactcatttgctatttccaactacattaattat 45151840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 211 - 346
Target Start/End: Complemental strand, 3009 - 2875
Alignment:
Q  211 cctaactagaacttaacaaaaatagttatactaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagca 310  Q
    |||||||||||| |||||||| |||||| |||||| ||||||||||||| || ||||||||||||| ||||| ||||| | ||||||| |||||||||||    
T  3009 cctaactagaacctaacaaaa-tagttaaactaatttaattacaattcaaaaccccaaatttgttttcccgcatacacgcatcaagcaaaacatcaagca 2911  T
Q  311 tacatcatatcttctttggtacctaaaatgttggtt 346  Q
     ||||||| | |||||||||||||||||||||||||    
T  2910 cacatcatctattctttggtacctaaaatgttggtt 2875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 74; Significance: 7e-34; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 265 - 346
Target Start/End: Complemental strand, 108818 - 108737
Alignment:
Q  265 ccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatcatatcttctttggtacctaaaatgttggtt 346  Q
    ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  108818 ccaaatttgtttccccgcgaacacacttcaagcacaacatcaagcacacatcatatcttctttggtacctaaaatgttggtt 108737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 109061 - 109007
Alignment:
Q  129 tttttgtaacgttccggattttgatccaaagacactaggtataattctttctttt 183  Q
    |||||||||||| |||||||| |||||||||||| || |||||||||||||||||    
T  109061 tttttgtaacgtcccggatttagatccaaagacattacgtataattctttctttt 109007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 74; Significance: 7e-34; HSPs: 72)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 10335211 - 10335348
Alignment:
Q  211 cctaactagaacttaacaaaaat-agttatactaatctaattacaattcataaa-cccaaatttgtttccccgcgtacacacttcaagcacaacatcaag 308  Q
    |||||||||||| |||||||||| | ||| |||||| ||||||||||||| ||| ||||||||||||| |||||| |||| ||||||| | |||||||||    
T  10335211 cctaactagaacataacaaaaattaattaaactaatttaattacaattcagaaaacccaaatttgttttcccgcggacacgcttcaaggaaaacatcaag 10335310  T
Q  309 catacatcatatcttctttggtacctaaaatgttggtt 346  Q
    || ||||||||||| |||||||||||||||||||||||    
T  10335311 cacacatcatatctcctttggtacctaaaatgttggtt 10335348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 211 - 343
Target Start/End: Original strand, 41951261 - 41951393
Alignment:
Q  211 cctaactagaacttaacaaaaat-agttatactaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagc 309  Q
    |||||||||||| |||||||||| | ||| |||||| ||||||||||||| ||||||||||||||||||| ||| |||||||||||| | || |||||||    
T  41951261 cctaactagaacataacaaaaattaattaaactaatttaattacaattcaaaaacccaaatttgtttccc-gcggacacacttcaaggaaaatatcaagc 41951359  T
Q  310 atacatcatatcttctttggtacctaaaatgttg 343  Q
    | ||||||||||| ||||||||||||||||||||    
T  41951360 acacatcatatctcctttggtacctaaaatgttg 41951393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 18285342 - 18285428
Alignment:
Q  261 aaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatca-tatcttctttggtacctaaaatgttggtt 346  Q
    |||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||||||| ||||||    
T  18285342 aaacccaattttgtttccccgcgtacacacttcaagcaaaacatcaagcatacatcattatctcctttggtacctaaaatattggtt 18285428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 211 - 346
Target Start/End: Original strand, 41942246 - 41942383
Alignment:
Q  211 cctaactagaacttaacaaaaat-agttatactaatctaattacaattcataaacc-caaatttgtttccccgcgtacacacttcaagcacaacatcaag 308  Q
    |||||||||||| |||||||||| | ||| |||||| ||||||||||||| |||   ||||||||||| |||||| |||| ||||||| | || ||||||    
T  41942246 cctaactagaacataacaaaaattaattaaactaatttaattacaattcaaaaaattcaaatttgttttcccgcggacacgcttcaaggaaaatatcaag 41942345  T
Q  309 catacatcatatcttctttggtacctaaaatgttggtt 346  Q
    || ||||||||||| |||||||||||||||||||||||    
T  41942346 cacacatcatatctcctttggtacctaaaatgttggtt 41942383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 30868831 - 30868743
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| |||||||||||||| ||||||||||||||||||    
T  30868831 tccgtccctaattataagacccttttgagaaaaaaaaattgtccctttttataagactcctttggtattttcaagtacattaattattt 30868743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 56432523 - 56432612
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  56432523 cctccgtccctaattataagacccttttgaga-attttttttgtctctttttataagactcctttgctatttccaactacattaattattt 56432612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 55563159 - 55563067
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||| |||||||||||||||||||||||       ||||| ||||||||||| | |||||  ||||||||| ||||||||||||||||    
T  55563159 cctccgtccctaattataagacccttttgagattttttttttgtccctttttataagaccccttttctatttccaactacattaattattttt 55563067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 26866895 - 26866806
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||||||||||||||| | |||||| ||||| ||| ||||||||||||||    
T  26866895 cctccgtccttaattataagacccttttgaga-attttttttgtctctttttataagacccctttgctattttcaactacattaattattt 26866806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 28501418 - 28501329
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | | |||||||||||||||||||||||||||||    
T  28501418 cctccgtccctaattataagacccttttgaga-aatttttttgtccctttttataagacccttttggtatttccaagtacattaattattt 28501329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 36391859 - 36391948
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  36391859 cctccgtccttaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 36391948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 37518009 - 37518099
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| | |||||||||||||||||||||||       ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  37518009 cctccgttcctaattataagacccttttgagattttttttttgtcactttttataagacccctttgctatttccaactacattaattattt 37518099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 37522225 - 37522315
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| | |||||||||||||||||||||||       ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  37522225 cctccgttcctaattataagacccttttgagattttttttttgtcactttttataagacccctttgctatttccaactacattaattattt 37522315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 52977987 - 52978076
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  52977987 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagactcctttgttatttccaactacattaattattt 52978076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 26626034 - 26625945
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||||||       ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  26626034 cctccgtccctaattataagacccttttgagattttttt-ttgtccctttttataagacccctttgctatttccaactacattaattattt 26625945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 23390341 - 23390291
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| |||||||||| ||||||||| ||||||||||||||||||||||||    
T  23390341 ttgtccctttttataaatctcctttgatatttccaagtacattaattattt 23390291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 52181177 - 52181127
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||||||||||    
T  52181177 ttgtccctttttataagactcctttgatatttccaagtacattaattattt 52181127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 4035830 - 4035919
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  4035830 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 4035919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 4415970 - 4416059
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  4415970 cctccgtccctaattataagacccttttgaga-atgttttttgtccctttttataagacccctttgctatttccaactacattaattattt 4416059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 5375589 - 5375500
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  5375589 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 5375500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 5743691 - 5743602
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  5743691 cctccgtccctaattataagacccttttgaga-aaaaaatttgtccctttttataagacccctttgttatttccaactacattaattattt 5743602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 35675952 - 35675863
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  35675952 cctccgtccctaattataagacccttttgaaa-aaaaaatttgtccctttttataagactcctttgttatttccaactacattaattattt 35675863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 36901142 - 36901052
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| |||||||||||       ||||| |||||| |||| |||| ||| ||||||||| ||||||||||||||    
T  36901142 cctccgtccctaattataagatccttttgagattttttttttgtccctttttgtaagactcccttgctatttccaactacattaattattt 36901052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 47806865 - 47806954
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  47806865 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 47806954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 375429 - 375518
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||||||||||||||||||       ||||| |||||||||||   |||||  ||||||||| ||||||||||||||    
T  375429 cctccgtccttaattataagacccttttgagat-ttttttttgtccctttttataagatcccttttctatttccaactacattaattattt 375518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 6656731 - 6656687
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||||||||||||||||||||||||||||    
T  6656731 ctttttataagacccctttggtatttccaagtacattaattattt 6656687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 24073158 - 24073069
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||| |||||||||       ||||| |||||||||||   |||||||||||||||| || |||||||||||    
T  24073158 cctccgtccttaattataagacctttttgagat-aaaaaattgtccctttttataagatccctttggtatttccaattatattaattattt 24073069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 6629466 - 6629416
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | | |||||||||||||||||||||||||||||    
T  6629466 ttgtccctttttataagacgcttttggtatttccaagtacattaattattt 6629416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 10588118 - 10588168
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  10588118 ttgtccctttttataagactcctttgttatttccaactacattaattattt 10588168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 13498479 - 13498429
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||||||||| ||||||||||||||||||    
T  13498479 ttgtccctttttataagactcatttggtattttcaagtacattaattattt 13498429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 13549024 - 13549074
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  13549024 ttgtccctttttataagacccctttggtgtttccaagtacattaattattt 13549074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 15241485 - 15241570
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaatta 128  Q
    ||||||||| |||||||||||| |||||||||        ||||| ||||||||||| |||||||| ||||||||| |||||||||||    
T  15241485 cctccgtccctaattataagactcttttgaga--atttttttgtccctttttataagactcctttgttatttccaactacattaatta 15241570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 20788975 - 20789025
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  20788975 ttgtccctttttataagactcctttgttatttccaactacattaattattt 20789025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 35909685 - 35909735
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||||||||||||||| ||||||||||||    
T  35909685 ttgtccctttttataagactcttttggtatttccaagtccattaattattt 35909735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 39797478 - 39797528
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | | |||||||||||||||||||||||||||||    
T  39797478 ttgtccctttttataagacccttttggtatttccaagtacattaattattt 39797528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 1859149 - 1859238
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  1859149 cctccgtccctaattataagacctttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 1859238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 17339083 - 17339172
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||  ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  17339083 cctccgtctctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 17339172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 17610052 - 17609964
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        ||||| ||||||||||| |||||||| ||||| ||| ||||||||||||||    
T  17610052 cctccgtccctaattataagatccttttgaga--atttttttgtccctttttataagactcctttgttattttcaactacattaattattt 17609964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 37173842 - 37173927
Alignment:
Q  45 cgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  37173842 cgtccctaattataagacccttttgaga-gttttttttgtccctttttataagacccctttgttatttccaactacattaattattt 37173927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 37352549 - 37352637
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| |   |||| ||||||||| ||||||||||||||    
T  37352549 cctccgtccttaattataagacccttttgaga--atttttttgtccctttttataagacctttttgttatttccaactacattaattattt 37352637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 37357448 - 37357536
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| |   |||| ||||||||| ||||||||||||||    
T  37357448 cctccgtccttaattataagacccttttgaga--atttttttgtccctttttataagacctttttgttatttccaactacattaattattt 37357536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 46949997 - 46950086
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||  ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  46949997 cctccgtccctaattataagacccttttgaga-atattttttgttcctttttataagacccctttgttatttccaactacattaattattt 46950086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 48030318 - 48030407
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  48030318 cctccatccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 48030407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 49373725 - 49373636
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||| | ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  49373725 cctccgtccctaattataagacccttttgaga-attttttttggccctttttataagacccctttgctatttccaactacattaattattt 49373636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 53629797 - 53629886
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||| ||||||||||||||||||||||        ||||||||||||||||| |  ||||| ||||||||| ||||||||||||||    
T  53629797 cctccatccctaattataagacccttttgaga-attttttttgtctctttttataagacctctttgttatttccaactacattaattattt 53629886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 32899250 - 32899162
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||||||       ||||  ||||||||||| | |||||  ||||||||| ||||||||||||||    
T  32899250 cctccgtccctaattataagacccttttgagat--tttttttgttcctttttataagaccccttttctatttccaactacattaattattt 32899162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 39144454 - 39144498
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  39144454 ctttttataagactcctttgttatttccaactacattaattattt 39144498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 38613458 - 38613501
Alignment:
Q  88 tttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||    
T  38613458 tttttataagactcatttggtattttcaagtacattaattattt 38613501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 49490198 - 49490110
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| |||||||||||  ||||||||||       ||||| ||||||||||| | |||||  ||||||||| ||||||||||||||    
T  49490198 tccgtccctaattataagattcttttgagattttttgtttgtccctttttataagacccctttcctatttccaactacattaattattt 49490110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 625960 - 625910
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  625960 ttgtccctttttataagacccctttgctatttccaactacattaattattt 625910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 300 - 346
Target Start/End: Complemental strand, 2683358 - 2683312
Alignment:
Q  300 aacatcaagcatacatcatatcttctttggtacctaaaatgttggtt 346  Q
    ||||||||||| | ||||||| ||||||| |||||||||||||||||    
T  2683358 aacatcaagcacatatcatattttctttgctacctaaaatgttggtt 2683312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 17261389 - 17261439
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| ||| |||| ||||| ||||| ||||||||||||    
T  17261389 ttgtctctttttataagactcttttgatattttcaagtgcattaattattt 17261439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 17467935 - 17467985
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| |||||||||||   |||||||||||| ||||||||||||||||||    
T  17467935 ttgtccctttttataagatccctttggtattttcaagtacattaattattt 17467985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 18706635 - 18706585
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  18706635 ttgtccctttttataagactcttttgctatttccaactacattaattattt 18706585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 29014317 - 29014267
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  29014317 ttgtccctttttataagactcatttgttatttccaactacattaattattt 29014267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 30745792 - 30745742
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  30745792 ttgtccctttttataagacccctttgttatttccaattacattaattattt 30745742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 36990958 - 36991008
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  36990958 ttgtccctttttataagacccctttgttatttccaactacattaattattt 36991008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Complemental strand, 37780200 - 37780154
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||||| || ||||||| ||||||| ||||||||||||||||    
T  37780200 ctttttataagacttctttggtgtttccaaatacattaattattttt 37780154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 37842219 - 37842269
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  37842219 ttgtccctttttataagacccctttgctatttccaactacattaattattt 37842269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 47299231 - 47299181
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  47299231 ttgtccctttttataagacccctttgttatttccaactacattaattattt 47299181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 50352108 - 50352158
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  50352108 ttgtccctttttataagacccctttgttatttccaactacattaattattt 50352158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 50603090 - 50603040
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| ||  |||| ||||||||| ||||||||||||||    
T  50603090 ttgtctctttttataagacttttttgctatttccaactacattaattattt 50603040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 55632252 - 55632202
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  55632252 ttgtccctttttataagacccctttgttatttccaactacattaattattt 55632202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 82 - 131
Target Start/End: Original strand, 25474861 - 25474910
Alignment:
Q  82 tgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||| ||||||||||| ||| |||| ||||| ||||||||||||||||||    
T  25474861 tgtccctttttataagactcttttgttattttcaagtacattaattattt 25474910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 70
Target Start/End: Complemental strand, 37776769 - 37776740
Alignment:
Q  41 cctccgtccttaattataagacccttttga 70  Q
    ||||||||||||||||||||||||||||||    
T  37776769 cctccgtccttaattataagacccttttga 37776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Complemental strand, 51329752 - 51329707
Alignment:
Q  88 tttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||||||||| | |||||| ||||||||| ||||||||||||||||    
T  51329752 tttttataagacccctttgctatttccaattacattaattattttt 51329707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 88 - 133
Target Start/End: Original strand, 55876431 - 55876476
Alignment:
Q  88 tttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||||  ||||||| ||||||||| ||||||||||||||||    
T  55876431 tttttataagattcctttgctatttccaactacattaattattttt 55876476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 4455111 - 4455155
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  4455111 ctttttataagacccctttgttatttccaactacattaattattt 4455155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 13620847 - 13620795
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| | |||||| |||||| || ||||||||||||||||    
T  13620847 ttgtccctttttataagacccctttgctatttctaactacattaattattttt 13620795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 29508849 - 29508901
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| |   |||| ||||||||||||||||||||||||||    
T  29508849 ttgtccctttttataagaccattttgatatttccaagtacattaattattttt 29508901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 38027182 - 38027226
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  38027182 ctttttataagacccctttgctatttccaactacattaattattt 38027226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 40459796 - 40459760
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  40459796 aagcatagatcatctcttctttggtacctaaaatgtt 40459760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 50533933 - 50533977
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  50533933 ctttttataagacccctttgttatttccaactacattaattattt 50533977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 70; Significance: 2e-31; HSPs: 53)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 211 - 344
Target Start/End: Original strand, 21231019 - 21231151
Alignment:
Q  211 cctaactagaacttaacaaaaatagttatactaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagca 310  Q
    |||||||||||| |||||||| |||||| |||||| ||||||||||||| || ||||||||||||| |||  || ||| | ||||||| |||||||||||    
T  21231019 cctaactagaacctaacaaaa-tagttaaactaatttaattacaattcaaaaccccaaatttgttttcccatgtccacgcatcaagcaaaacatcaagca 21231117  T
Q  311 tacatcatatcttctttggtacctaaaatgttgg 344  Q
     ||||||| |||||||||||||||||||||||||    
T  21231118 cacatcatctcttctttggtacctaaaatgttgg 21231151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 211 - 342
Target Start/End: Original strand, 42076669 - 42076801
Alignment:
Q  211 cctaactagaacttaacaaaaat-agttatactaatctaattacaattcataaa-cccaaatttgtttccccgcgtacacacttcaagcacaacatcaag 308  Q
    |||||||||||| |||||||||| | ||| |||||| ||||||||||||| ||| |||||||||||||||||||| |||||||| ||| | || ||||||    
T  42076669 cctaactagaacataacaaaaattaattaaactaatttaattacaattcagaaaacccaaatttgtttccccgcggacacactt-aaggaaaatatcaag 42076767  T
Q  309 catacatcatatcttctttggtacctaaaatgtt 342  Q
    || ||||||||||| |||||||||||||||||||    
T  42076768 cacacatcatatctcctttggtacctaaaatgtt 42076801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 9817428 - 9817513
Alignment:
Q  261 aaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcatacatcatatcttctttggtacctaaaatgttggtt 346  Q
    ||||||| |||| |||||||||| |||||||||||||| ||||||||||||| ||||  |||  ||||||||||||||||||||||    
T  9817428 aaacccatatttatttccccgcggacacacttcaagcaaaacatcaagcatagatcaagtctcttttggtacctaaaatgttggtt 9817513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 212 - 346
Target Start/End: Complemental strand, 24424176 - 24424039
Alignment:
Q  212 ctaactagaacttaacaaaaatagttatactaatctaattacaattca-taaacccaaatttgtttccccgc-gtacacacttcaagcacaa-catcaag 308  Q
    ||||||| ||||||||||||||||||| | || |||||||||||||||  ||| ||||||||||||||||||  ||||| ||||||||| || |||| ||    
T  24424176 ctaactaaaacttaacaaaaatagttaaattagtctaattacaattcagaaaaaccaaatttgtttccccgcaatacacgcttcaagcaaaaccatcgag 24424077  T
Q  309 catacatcatatcttctttggtacctaaaatgttggtt 346  Q
     | | ||||||||| |||||||||||||| | ||||||    
T  24424076 aacatatcatatctcctttggtacctaaactattggtt 24424039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 19176141 - 19176230
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||| |       ||||| ||||||||||| | | |||||||||||||||||||||||||||||    
T  19176141 cctccgtccttaattataagacccttttgag-taatttttttgtccctttttataagacccttttggtatttccaagtacattaattattt 19176230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 133
Target Start/End: Complemental strand, 8797327 - 8797238
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||||    
T  8797327 tccgtccttaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattttt 8797238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 5244620 - 5244568
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  5244620 ttgtccctttttataagactcttttggtatttccaagtacattaattattttt 5244568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 42 - 131
Target Start/End: Complemental strand, 33865572 - 33865484
Alignment:
Q  42 ctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||| ||||||||||||||||||||||        ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  33865572 ctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagactcctttgctatttccaactacattaattattt 33865484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 11293697 - 11293747
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||| ||||||||||||||||||||||||||    
T  11293697 ttgtccctttttataagactccttcggtatttccaagtacattaattattt 11293747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 51127 - 51038
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  51127 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 51038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 2944304 - 2944215
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  2944304 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 2944215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 7758941 - 7758852
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||| |||||||||        ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  7758941 cctccgtccctaattataagacacttttgaga-atattttttgtccctttttataagactcctttgttatttccaactacattaattattt 7758852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 8951460 - 8951371
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  8951460 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagactcttttgttatttccaactacattaattattt 8951371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 12802616 - 12802704
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        || || ||||||||||| | ||| |||||||||||||||||||||||||||    
T  12802616 cctccgtccctaattataagacccttttgaga--aaaaatttatccctttttataagacccctatggtatttccaagtacattaattattt 12802704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 127
Target Start/End: Complemental strand, 13568937 - 13568851
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaatt 127  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| |  ||||| ||||||||| ||||||||||    
T  13568937 cctccgtccttaattataagacccttttgagagaaaaaatttgtccctttttataagacctctttgttatttccaactacattaatt 13568851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 23688197 - 23688107
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  23688197 cctccgtccctaattataagacccttttgaaaaaaaaaaattgtccctttttataagacccctttgctatttccaactacattaattattt 23688107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 28192207 - 28192118
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  28192207 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 28192118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 32675789 - 32675700
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  32675789 cctccgtccctaattataagacccttttgaga-aaaaaatttgtccctttttataagacccctttgttatttccaactacattaattattt 32675700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 44502625 - 44502713
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| |||||||||||       ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  44502625 cctccgtccctaattataagatccttttgagatttttt--ttgtccctttttataagacccctttgttatttccaactacattaattattt 44502713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 8251965 - 8251874
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | | |||| ||||||||| ||||||||||||||||    
T  8251965 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccttttgttatttccaactacattaattattttt 8251874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 8948381 - 8948294
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  8948381 tccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 8948294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 23487069 - 23487160
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||||    
T  23487069 cctccgtccctaattataagacccttttgaaa-aaaaaaattgtccctttttataagacccctttgctatttccaactacattaattattttt 23487160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 41898482 - 41898439
Alignment:
Q  88 tttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||| ||| |||||||||||||||||||||||||||||    
T  41898482 tttttataagactcttttggtatttccaagtacattaattattt 41898439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 42885059 - 42885150
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||||    
T  42885059 cctccgtccctaattataagacccttttgaaa-aaaaaaattgtccctttttataagacccctttgttatttccaactacattaattattttt 42885150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 23995621 - 23995671
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  23995621 ttgtccctttttataagacccctttggtgtttccaagtacattaattattt 23995671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 26625837 - 26625887
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| |||||||||||||| |||||||||    
T  26625837 ttgtccctttttataagactcctttgatatttccaagtacactaattattt 26625887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 28864500 - 28864450
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  28864500 ttgtccctttttataagactcctttgttatttccaactacattaattattt 28864450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 9035571 - 9035482
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        |||||| |||||||||| | |||||| ||||||||| ||||||||||||||    
T  9035571 cctccgtccctaattataagaccattttgaga-attttttttgtctttttttataagacccctttgctatttccaactacattaattattt 9035482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 11798610 - 11798699
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||| |||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  11798610 cctctgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 11798699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 14584163 - 14584074
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| | ||||||||||||||||||||||        ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  14584163 cctccgttcctaattataagacccttttgaga-attttttttgtccctttttataagactcttttgctatttccaactacattaattattt 14584074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 18112007 - 18111918
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||| ||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  18112007 cctccgtccctaattataagacccttttg-gaaaaaaaaattgtccctttttataagacccctttgctatttccaactacattaattattt 18111918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 18455725 - 18455814
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||| |||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  18455725 cctccgtccctaattataagacccttttaaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 18455814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 29321326 - 29321237
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  29321326 cctccatccctaattataagacccttttgaga-aatttttttgtccctttttataagacccctttgttatttccaactacattaattattt 29321237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 29806254 - 29806166
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||| ||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  29806254 cctccgtccctaattataaaacccttttgaga--atttttttgtccctttttataagacccctttgttatttccaactacattaattattt 29806166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 40741270 - 40741359
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||| ||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  40741270 cctccgtccctaattataatacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaattacattaattattt 40741359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 40784896 - 40784984
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  40784896 cctccgtccctaattataagacctttttgaga--atttttttgtccctttttataagactcatttgctatttccaactacattaattattt 40784984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 44251153 - 44251064
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  44251153 cctccgtccctaattataagaccattttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 44251064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 44888685 - 44888774
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| |||||||| ||||| ||| ||||||||||||||    
T  44888685 cctccgtccctaattataagacccttttgaaa-aaaaaaattgtccctttttataagactcctttgctattttcaactacattaattattt 44888774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 86 - 133
Target Start/End: Original strand, 30512816 - 30512863
Alignment:
Q  86 tctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||||||||||| | |||||||||||| ||||||||||||||| ||||    
T  30512816 tctttttataagacccctttggtattttcaagtacattaattaatttt 30512863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 44165455 - 44165412
Alignment:
Q  88 tttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||| |||||||| |||||||||||||| |||||||||    
T  44165455 tttttataagactcctttgatatttccaagtacactaattattt 44165412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 4631546 - 4631496
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  4631546 ttgtccctttttataagacccctttgttatttccaactacattaattattt 4631496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 5109925 - 5109975
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | | |||||||||| ||||||||||||||||||    
T  5109925 ttgtccctttttataagacccatttggtattttcaagtacattaattattt 5109975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 7683556 - 7683506
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  7683556 ttgtccctttttataagactcatttgctatttccaactacattaattattt 7683506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 23497772 - 23497822
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| | | ||||||||||  |||||||||||||||||    
T  23497772 ttgtctctttttataagacccttttggtatttataagtacattaattattt 23497822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 302 - 344
Target Start/End: Original strand, 29132449 - 29132491
Alignment:
Q  302 catcaagcatacatcatatcttctttggtacctaaaatgttgg 344  Q
    ||||||||||||| ||| |||||||| ||||||||||||||||    
T  29132449 catcaagcatacaacatctcttctttcgtacctaaaatgttgg 29132491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 32522836 - 32522786
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  32522836 ttgtccctttttataagacccctttgctatttccaattacattaattattt 32522786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 34490561 - 34490611
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  34490561 ttgtccctttttataagacccctttgttatttccaactacattaattattt 34490611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Complemental strand, 547872 - 547819
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattatttttg 134  Q
    |||||||||||||||||     ||||||||||| ||||||||||||||||||||    
T  547872 ttgtctctttttataagatgtttttggtatttctaagtacattaattatttttg 547819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 81 - 134
Target Start/End: Original strand, 23424459 - 23424512
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattatttttg 134  Q
    |||||||||||||||||     |||||||||| |||||||||||||||||||||    
T  23424459 ttgtctctttttataagatatttttggtattttcaagtacattaattatttttg 23424512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 51 - 133
Target Start/End: Complemental strand, 35143541 - 35143461
Alignment:
Q  51 taattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||||||||||||||||        ||||| ||||||||||| ||  |||| ||||||||| ||||||||||||||||    
T  35143541 taattataagacccttttgaga--atatttttgtccctttttataagacttatttgttatttccaactacattaattattttt 35143461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 69
Target Start/End: Original strand, 17856522 - 17856550
Alignment:
Q  41 cctccgtccttaattataagacccttttg 69  Q
    |||||||||||||||||||||||||||||    
T  17856522 cctccgtccttaattataagacccttttg 17856550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 125
Target Start/End: Complemental strand, 31619241 - 31619197
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaa 125  Q
    ||||||||||||||||| |   |||||||||||||||||||||||    
T  31619241 ttgtctctttttataagacctttttggtatttccaagtacattaa 31619197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 41014554 - 41014598
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  41014554 ctttttataagacccctttgttatttccaactacattaattattt 41014598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 346
Target Start/End: Original strand, 34995 - 35126
Alignment:
Q  212 ctaactagaacttaacaaaaatagttatactaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcat 311  Q
    |||||||||||||||||||| |||||| | |||| ||||||||||||| ||| ||||||||||| ||| || ||||| ||||||||| |||||||||||     
T  34995 ctaactagaacttaacaaaa-tagttaaa-taatttaattacaattcaaaaaaccaaatttgtt-ccctgcatacacgcttcaagcaaaacatcaagcac 35091  T
Q  312 acatcatatcttctttggtacctaaaatgttggtt 346  Q
    |||| |  |||| ||||||||||||||| ||||||    
T  35092 acattacctcttttttggtacctaaaattttggtt 35126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 212 - 346
Target Start/End: Original strand, 147627 - 147758
Alignment:
Q  212 ctaactagaacttaacaaaaatagttatactaatctaattacaattcataaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcat 311  Q
    |||||||||||||||||||| |||||| | |||| ||||||||||||| ||| ||||||||||| ||| || ||||| ||||||||| |||||||||||     
T  147627 ctaactagaacttaacaaaa-tagttaaa-taatttaattacaattcaaaaaaccaaatttgtt-ccctgcatacacgcttcaagcaaaacatcaagcac 147723  T
Q  312 acatcatatcttctttggtacctaaaatgttggtt 346  Q
    |||| |  |||| ||||||||||||||| ||||||    
T  147724 acattacctcttttttggtacctaaaattttggtt 147758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 51; Significance: 4e-20; HSPs: 56)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 213 - 346
Target Start/End: Original strand, 13379229 - 13379361
Alignment:
Q  213 taactagaacttaacaaaaatagttatactaatctaattacaattca-taaacccaaatttgtttccccgcgtacacacttcaagcacaacatcaagcat 311  Q
    |||||||||||||  ||||||||||| |||||  |||||||||||||  ||||| ||||||| ||||||| |||||| ||||||||| |||| ||||||     
T  13379229 taactagaacttag-aaaaatagttaaactaagttaattacaattcagaaaacctaaatttg-ttccccgagtacacgcttcaagcaaaacaccaagcac 13379326  T
Q  312 acatcatatcttctttggtacctaaaatgttggtt 346  Q
    |||||  | || |||||||||||||||||||||||    
T  13379327 acatctgacctcctttggtacctaaaatgttggtt 13379361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 17483738 - 17483827
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||||||||||||||| | |||||||| ||||||||||||||||||||||    
T  17483738 cctccgtccctaattataagacccttttgaaa-aaataatttgtctctttttataagacccctttggtgtttccaagtacattaattattt 17483827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 55 - 128
Target Start/End: Original strand, 50074428 - 50074501
Alignment:
Q  55 tataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaatta 128  Q
    ||||||||||||||||||        ||||||||||||||||| || |||||||||||||||||||||||||||    
T  50074428 tataagacccttttgagaattattttttgtctctttttataagacttctttggtatttccaagtacattaatta 50074501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 9379096 - 9379046
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| |||||||| ||||||||| ||||||||||||||    
T  9379096 ttgtctctttttataagactcctttgttatttccaactacattaattattt 9379046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 1039413 - 1039324
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  1039413 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 1039324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 1046319 - 1046230
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  1046319 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 1046230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 11741402 - 11741491
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  11741402 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 11741491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 15811264 - 15811175
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  15811264 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 15811175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 23541984 - 23542073
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  23541984 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 23542073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 25509214 - 25509302
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  25509214 cctccgtccctaattataagacccttttgaga--atttttttgtccctttttataagacccctttgctatttccaattacattaattattt 25509302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 32169986 - 32169897
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||| ||||||||        ||||| ||||||||||| |||||||| ||||| ||| ||||||||||||||    
T  32169986 cctccgtccttaattataagaccattttgaga-attttttttgtccctttttataagactcctttgttattttcaactacattaattattt 32169897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 38261345 - 38261434
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||||        ||||| ||||||||||| |||||||  ||||| ||| ||||||||||||||    
T  38261345 cctccgtccttaattataagacccttttgaga-attttttttgtccctttttataagactccttttctattttcaactacattaattattt 38261434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 39497438 - 39497527
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  39497438 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 39497527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 45039417 - 45039506
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  45039417 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 45039506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 49907026 - 49907115
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  49907026 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 49907115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 50246961 - 50246873
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        |||||| |||||||||| |||||||| ||||||||| ||||||||||||||    
T  50246961 cctccgtccgtaattataagatccttttgaga--atttttttgtctatttttataagactcctttgttatttccaactacattaattattt 50246873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 52431206 - 52431117
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  52431206 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 52431117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 1427204 - 1427295
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||||||| ||||||||||||||||||        ||||||||| ||||||| | |||||| ||||||||||| ||||||||| ||||    
T  1427204 cctccgtccttaaatataagacccttttgaga-attttttttgtctcttattataagacccctttgttatttccaagtgcattaattaatttt 1427295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 8472056 - 8472143
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  8472056 tccgtccctaattataagacccttttgaga-aatttttttgtccctttttataagacccctttgttatttccaactacattaattattt 8472143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 21290129 - 21290215
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| |||||||||||||| |||||||||    
T  21290129 tccgtccctaattataagacccttttgaga--aaaaaattgtccctttttataagacccctttgatatttccaagtacactaattattt 21290215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 27479604 - 27479694
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||||||||||||| |||||||||| |        ||||| |||||||||||   |||||||||||||||||||||||||||||||||    
T  27479604 cctccgtccttaattataatacccttttgaaa-aaataatttgtc-ctttttataagatccctttggtatttccaagtacattaattattttt 27479694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 131
Target Start/End: Complemental strand, 41855503 - 41855416
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  41855503 tccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 41855416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 10384036 - 10383986
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  10384036 ttgtccctttttataagactcctttgttatttccaactacattaattattt 10383986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 19349257 - 19349303
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||||| | | |||||||||||||||||||||||||||||||    
T  19349257 ctttttataagacccatttggtatttccaagtacattaattattttt 19349303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 131
Target Start/End: Complemental strand, 30289899 - 30289805
Alignment:
Q  36 cactgcctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||| ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||  ||||||||| ||||||||||||||    
T  30289899 cactccctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttattatttccaactacattaattattt 30289805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 39867649 - 39867599
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  39867649 ttgtccctttttataagactcctttgttatttccaactacattaattattt 39867599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 44646278 - 44646365
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| |||||||||||||||||||| ||       ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  44646278 tccgtccctaattataagacccttttgaaattttttt-ttgtccctttttataagacccctttgttatttccaactacattaattattt 44646365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 49549045 - 49549095
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | | |||||||||||||||||||||||||||||    
T  49549045 ttgtccctttttataagacccttttggtatttccaagtacattaattattt 49549095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 50008018 - 50008068
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| | |||||| ||||||||| ||||||||||||||    
T  50008018 ttgtctctttttataagacccctttgttatttccaactacattaattattt 50008068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 52428932 - 52428982
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||||||||| ||||||||||||||||||    
T  52428932 ttgtccctttttataaggctcttttggtattttcaagtacattaattattt 52428982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 82 - 131
Target Start/End: Complemental strand, 2637178 - 2637129
Alignment:
Q  82 tgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||| ||||||||||| | ||||||||||||| |||||||||||||||||    
T  2637178 tgtccctttttataagacccctttggtatttctaagtacattaattattt 2637129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 9413357 - 9413268
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  9413357 cctccgtccctaattataagacccttttgaaa-aaaaaaattgtccctttttataagacccctttgctatttccaactacattaattattt 9413268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 21631139 - 21631050
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  21631139 cctccgtccctaattataagacccttttga-agaaacaaattgtccctttttataagacccctttgctatttccaactacattaattattt 21631050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 38505804 - 38505893
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| |||||||||||| |        ||||  ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  38505804 cctccgtccttaattattagacccttttgaaa-aaataatttgttcctttttataagactcctttgatatttccaaatacattaattattt 38505893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 41317598 - 41317688
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||          ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  41317598 cctccgtccctaattataagacccttttgaagaaaaaaaattgtccctttttataagacccctttgctatttccaactacattaattattt 41317688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 52601996 - 52602085
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||| |||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  52601996 cctccgtccctaattataagacccttttaaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 52602085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 5858261 - 5858349
Alignment:
Q  42 ctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||| |||||||||||| |||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  5858261 ctccgtccctaattataagactcttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 5858349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 15763359 - 15763411
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||||    
T  15763359 ttgtccctttttataagactcttttgctatttccaactacattaattattttt 15763411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 39425817 - 39425773
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||    
T  39425817 ctttttataagacccctttggtatttccaagtacataaattattt 39425773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 4389653 - 4389703
Alignment:
Q  81 ttgtctctttttataag-tctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| |||| |||| ||||||||||||||||||||||||    
T  4389653 ttgtctctttttataagatctc-tttgatatttccaagtacattaattattt 4389703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 212 - 255
Target Start/End: Original strand, 24302146 - 24302189
Alignment:
Q  212 ctaactagaacttaacaaaaatagttatactaatctaattacaa 255  Q
    ||||||| ||||||||||||||||||| |||||| |||||||||    
T  24302146 ctaactacaacttaacaaaaatagttaaactaatttaattacaa 24302189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 23530547 - 23530641
Alignment:
Q  41 cctccgtccttaattataagacccttttgaga--tnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||||||||||||||||||||||||||||| |  |       |||||  |||||||||| | |||||  ||||||||| ||||||||||||||||    
T  23530547 cctccgtccttaattataagacccttttgaaattttttttttttgtccttttttataagaccccttttctatttccaactacattaattattttt 23530641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 30996788 - 30996838
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| |||||||||||   | |||||||||||||||||||||||||||||    
T  30996788 ttgtccctttttataagatccatttggtatttccaagtacattaattattt 30996838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 31636123 - 31636073
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| ||| |||| ||||||||| || |||||||||||    
T  31636123 ttgtctctttttataagactcatttgctatttccaactatattaattattt 31636073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 34931123 - 34931173
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  34931123 ttgtccctttttataagacccctttgctatttccaactacattaattattt 34931173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 45794388 - 45794438
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  45794388 ttgtccctttttataagacccctttgttatttccaactacattaattattt 45794438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 50008476 - 50008426
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||   |||||| ||||||||| ||||||||||||||    
T  50008476 ttgtctctttttataagatccctttgttatttccaactacattaattattt 50008426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 282 - 342
Target Start/End: Original strand, 37666515 - 37666576
Alignment:
Q  282 cgtacacacttcaagcacaacatcaa-gcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||| ||||||||||| |||  ||| ||||| ||||| |||||||||||||||||||||||    
T  37666515 cgtacgcacttcaagcaaaactacaaagcatagatcatctcttctttggtacctaaaatgtt 37666576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 39750413 - 39750324
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||| |||| ||||||||||||||||||||||        ||||  ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  39750413 cctctgtccctaattataagacccttttgaga-attttttttgttcctttttataagacccctttgttatttccaactacattaattattt 39750324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 6130113 - 6130165
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||||| |||||||||| ||  |||| ||||||||| ||||||||||||||||    
T  6130113 ttgtctttttttataagactattttgatatttccaattacattaattattttt 6130165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 18172378 - 18172422
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  18172378 ctttttataagacccctttgttatttccaactacattaattattt 18172422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 41620159 - 41620107
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| |||||||||||  |  ||||||||||| |||||||||||||||||||    
T  41620159 ttgtccctttttataagatttatttggtatttctaagtacattaattattttt 41620107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 43406728 - 43406764
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  43406728 aagcatagatcatctcttctttggtacctaaaatgtt 43406764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 103 - 131
Target Start/End: Complemental strand, 46271321 - 46271293
Alignment:
Q  103 tttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||||||||||||||    
T  46271321 tttggtatttccaagtacattaattattt 46271293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 47754068 - 47754112
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  47754068 ctttttataagactcatttgctatttccaactacattaattattt 47754112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 286 - 346
Target Start/End: Original strand, 51442712 - 51442772
Alignment:
Q  286 cacacttcaagcacaacatcaagcatacatcatatcttctttggtacctaaaatgttggtt 346  Q
    ||||||||||||| ||||||||||||| ||||  |||  |||  |||||||||||||||||    
T  51442712 cacacttcaagcaaaacatcaagcatagatcaagtctcatttaatacctaaaatgttggtt 51442772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 46; Significance: 3e-17; HSPs: 50)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 41687144 - 41687056
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| |||||||||||||||||||||||||||||||||    
T  41687144 cctccgtccataattataagacccttttgaaa--aaaaaattgtccctttttataagactcctttggtatttccaagtacattaattattt 41687056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 14913653 - 14913743
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  14913653 cctccgtccctaattataagacccttttgagaatttttttttgtccctttttataagacccctttgctatttccaactacattaattattt 14913743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 23260170 - 23260081
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        |||||  ||||||||||  ||||||||||||||||||||||||||||||||    
T  23260170 cctccgtccctaattataagacccttttgaga-aaaaaatttgtccttttttataagattcctttggtatttccaagtacattaattattt 23260081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 7951567 - 7951655
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||||||       ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  7951567 cctccgtccctaattataagacccttttgagatttttt--ttgtccctttttataagacccctttgttatttccaactacattaattattt 7951655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 32964138 - 32964226
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| |||||||||       ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  32964138 cctccgtccctaattataagaccattttgagatttttt--ttgtccctttttataagactcctttgctatttccaactacattaattattt 32964226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 43 - 131
Target Start/End: Original strand, 31657692 - 31657778
Alignment:
Q  43 tccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| |||||||||||||||||||| |        ||||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  31657692 tccgtccctaattataagacccttttgaaa--aataatttgtccctttttataagactcttttggtatttccaagtacattaattattt 31657778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 1265954 - 1266043
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  1265954 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 1266043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 3028018 - 3028107
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  3028018 cctccgtccctaattataagacccttttgaga-aaaaaatttgtccctttttataagactcatttgctatttccaactacattaattattt 3028107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 9020699 - 9020789
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| |||||||| ||||||||  ||||||||||||||    
T  9020699 cctccgtccctaattataagacccttttgaaaaaaaaaaattgtccctttttataagactcctttgctatttccatctacattaattattt 9020789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 9828398 - 9828487
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  9828398 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 9828487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 22527697 - 22527786
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  22527697 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 22527786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 34662209 - 34662298
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  34662209 cctccgtccctaattataagacccttttgaga-gttttttttgtccctttttataagacccctttgttatttccaactacattaattattt 34662298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 39984775 - 39984863
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||||||||||||| |||        ||||||||||||||||| ||| |||  ||||||||| ||||||||||||||    
T  39984775 cctccgtccttaattataagacccttttaaga--atttttttgtctctttttataagactcattttctatttccaactacattaattattt 39984863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 40004441 - 40004352
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  40004441 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 40004352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 8949817 - 8949909
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnn--ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||          ||||| ||||||||||| |||||||| |||||||||||||| |||||||||    
T  8949817 cctccgtccctaattataagacccttttgagaagaaaaaaaattgtccctttttataagactcctttgatatttccaagtacactaattattt 8949909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 18251019 - 18251112
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnn-ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||||||||||||||||||||||||||| |||         ||||||||||||| ||| | |||||||||||||||| || |||||||||||||    
T  18251019 cctccgtccttaattataagacccttttaagaagaaaaaaattgtctctttttaaaagacccctttggtatttccaattaaattaattattttt 18251112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 42 - 131
Target Start/End: Original strand, 32478144 - 32478232
Alignment:
Q  42 ctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  32478144 ctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 32478232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 13759479 - 13759388
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||| | ||||||||||||||||||||||        ||||| ||||||||||| || ||||| ||||||||| ||||||||||||||||    
T  13759479 cctccgttcctaattataagacccttttgaga-attttttttgtccctttttataagacttctttgctatttccaactacattaattattttt 13759388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 11432354 - 11432404
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| |||||||||||   |||||||||||||||||||||||||||||||    
T  11432354 ttgtccctttttataagatccctttggtatttccaagtacattaattattt 11432404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 16285183 - 16285133
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||||||||||||||||||    
T  16285183 ttgtccctttttataagacccctttgatatttccaagtacattaattattt 16285133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 261 - 346
Target Start/End: Original strand, 18926378 - 18926464
Alignment:
Q  261 aaacccaaatttgtttccccgcgtacacacttcaagcacaa-catcaagcatacatcatatcttctttggtacctaaaatgttggtt 346  Q
    |||||||| | |||| |||||||||||| ||||||| | || | |||| || ||||||| ||||||||||||| |||||||||||||    
T  18926378 aaacccaactgtgttcccccgcgtacacgcttcaaggaaaaacctcaaacacacatcatctcttctttggtacataaaatgttggtt 18926464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 128
Target Start/End: Original strand, 21239104 - 21239190
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaatta 128  Q
    ||||||||| |||||| |||||||||||||||        ||||||||||||||||| | |||||| ||||||||| |||||||||||    
T  21239104 cctccgtccctaattagaagacccttttgaga-attttttttgtctctttttataagacccctttgctatttccaactacattaatta 21239190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 3497832 - 3497743
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||| | ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  3497832 cctccgttcctaattataagacccttttgaga-aatttttttgtccctttttataagacccctttgttatttccaactacattaattattt 3497743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 7940457 - 7940546
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  7940457 cctccgtccctaattataagacccttttgaaa-aaaaaaattgtccctttttataagacccctttgttatttccaactacattaattattt 7940546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Original strand, 14619258 - 14619343
Alignment:
Q  45 cgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||||||||||||||        ||||||||||||||||| | |||||  ||||||||| ||||||||||||||    
T  14619258 cgtccctaattataagacccttttgaga-attttttttgtctctttttataagaccccttttctatttccaactacattaattattt 14619343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 15190847 - 15190758
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||| |||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  15190847 cctccgtccctaattataagactcttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 15190758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 19571971 - 19571881
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||||||       ||||| ||||||||||| | | |||  ||||||||| || |||||||||||    
T  19571971 cctccgtccctaattataagacccttttgagattttttttttgtccctttttataagacccatttactatttccaactatattaattattt 19571881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 20142291 - 20142202
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||| ||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  20142291 cctccgtccctaattataagacccttttg-gaaaaaaaaattgtccctttttataagacccctttgctatttccaactacattaattattt 20142202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 49 - 131
Target Start/End: Complemental strand, 26605646 - 26605566
Alignment:
Q  49 cttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  26605646 cttaattataagacccttttgaga--atttttttgtccctttttataagacccctttgatatttccaactacattaattattt 26605566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 41384204 - 41384115
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        ||||||| ||||||||| | |||||| ||||||||| ||||||||||||||    
T  41384204 cctccgtccctaattataagatccttttgaga-atttttgttgtctccttttataagacccctttgttatttccaactacattaattattt 41384115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 14649193 - 14649279
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||| |||       || |||||||||||||| | |||||| ||||||||| ||||||||||||||    
T  14649193 cctccgtccctaattataagatccttttgtgatttt----ttttctctttttataagacccctttgctatttccaactacattaattattt 14649279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 25837058 - 25837102
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||   |||||||||||||||||||||||||||||||    
T  25837058 ctttttataagatccctttggtatttccaagtacattaattattt 25837102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 10116624 - 10116671
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaatta 128  Q
    |||||||||||||||||  || |||||||||||||| |||||||||||    
T  10116624 ttgtctctttttataagattcttttggtatttccaaatacattaatta 10116671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 84 - 131
Target Start/End: Complemental strand, 28140910 - 28140863
Alignment:
Q  84 tctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||| | |||||| ||||||||| ||||||||||||||    
T  28140910 tctctttttataagacccctttgctatttccaactacattaattattt 28140863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 30117157 - 30117204
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaatta 128  Q
    ||||||||||||||||| |||||||| |||||  ||||||||||||||    
T  30117157 ttgtctctttttataagactcctttgatatttgtaagtacattaatta 30117204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 81 - 128
Target Start/End: Original strand, 37700137 - 37700184
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaatta 128  Q
    |||| |||||||||||| |||||||| ||||||| |||||||||||||    
T  37700137 ttgtttctttttataagactcctttgatatttccgagtacattaatta 37700184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 4902812 - 4902903
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||  ||||||||||||| |||||||||       ||||| ||||||||||| | |||||| ||||| ||| ||||||||||||||||    
T  4902812 cctccgtctctaattataagaccattttgagatttattt-ttgtccctttttataagacccctttgttattttcaactacattaattattttt 4902903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 10734514 - 10734464
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  10734514 ttgtccctttttataagacccctttgttatttccaactacattaattattt 10734464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 13660905 - 13660955
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  13660905 ttgtccctttttataagacccctttgttatttccaactacattaattattt 13660955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 14570881 - 14570831
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||| ||| ||||||||||||||    
T  14570881 ttgtccctttttataagactcctttgttattttcaattacattaattattt 14570831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 21069681 - 21069731
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |   |||||||||||||||||||||||||||||    
T  21069681 ttgtccctttttataagaccattttggtatttccaagtacattaattattt 21069731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 24857600 - 24857650
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| | ||||||||||||||||||||||    
T  24857600 ttgtccctttttataagacccctttgatgtttccaagtacattaattattt 24857650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 28041344 - 28041294
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  28041344 ttgtccctttttataagacccctttgttatttccaactacattaattattt 28041294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 31642231 - 31642281
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| |||||||||||||| |||||||||    
T  31642231 ttgtccctttttataagacccctttgatatttccaagtacactaattattt 31642281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 87 - 133
Target Start/End: Original strand, 34332268 - 34332314
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||||| ||| |||| ||||||||| ||||||||||||||||    
T  34332268 ctttttataagactcatttgttatttccaactacattaattattttt 34332314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 537665 - 537629
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  537665 aagcatagatcatctcttctttggtacctaaaatgtt 537629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 13335332 - 13335384
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||| |||||||||||| | | ||||||||||||||||| |||||||| ||||    
T  13335332 ttgtttctttttataagacccatttggtatttccaagtatattaattaatttt 13335384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 31888943 - 31888987
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  31888943 ctttttataagacccctttgttatttccaactacattaattattt 31888987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 33819308 - 33819256
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||||||||||||||||  || |||| ||||||||| ||||||||||| ||||    
T  33819308 ttgtctctttttataagattcatttgatatttccaaatacattaattaatttt 33819256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 40691721 - 40691685
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| | |||||||||||||||||||||||||||    
T  40691721 aagcatagaccatatcttctttggtacctaaaatgtt 40691685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 45; Significance: 1e-16; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 13648161 - 13648072
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||||||||||||||||||||||||||       ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  13648161 cctccgtccttaattataagacccttttgagat-ttttttttgtccctttttataagactcatttgttatttccaactacattaattattt 13648072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 8743193 - 8743281
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||||||||||||||||||    
T  8743193 cctccgtccctaattataagacccttttgaga--atttttttgtccctttttataagacccctttgttatttccaagtacattaattattt 8743281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 34915575 - 34915486
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||||| |||||| ||||||||| ||||||||||||||    
T  34915575 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagtcccctttgctatttccaactacattaattattt 34915486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 22999038 - 22998988
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  22999038 ttgtccctttttataagactcttttggtatttccaagtacattaattattt 22998988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 23789366 - 23789416
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||||||||||||||||||||||||||||    
T  23789366 ttgtccctttttataagactcttttggtatttccaagtacattaattattt 23789416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 402653 - 402564
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  402653 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgctatttccaactacattaattattt 402564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 9038647 - 9038736
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  9038647 cctccgtccctaattataagacccttttgaaa-aaatcatttgtccctttttataagacccctttggtgtttccaagtacattaattattt 9038736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 34301864 - 34301775
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  34301864 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 34301775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 28236194 - 28236142
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| || ||||||| ||||||||||||||||||||||||    
T  28236194 ttgtccctttttataagacttctttggtgtttccaagtacattaattattttt 28236142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 18106164 - 18106114
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| | | |||| ||||||||||||||||||||||||    
T  18106164 ttgtctctttttataagacccttttgttatttccaagtacattaattattt 18106114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 23604465 - 23604556
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnntt-gtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        || ||||||||||||||| | |||||| ||||| ||| ||||||||||||||    
T  23604465 cctccgtccctaattataagacccttttgagaaatttttttttgtctctttttataagacccctttgctattttcaactacattaattattt 23604556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 45 - 131
Target Start/End: Complemental strand, 2365121 - 2365036
Alignment:
Q  45 cgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||| ||||||||        ||||| ||||||||||| |||||||| ||||| |||||||| |||||||||    
T  2365121 cgtccttaattataagacctttttgaga-aaaaaatttgtcactttttataagactcctttgatattttcaagtacactaattattt 2365036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 9388823 - 9388734
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  9388823 cctccgtccctaattataagacctttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 9388734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 13321358 - 13321269
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | ||||| || ||||||||||||||||||||||    
T  13321358 cctccgtccctaattataagacccttttgaaa-aaataatttgtccctttttataagacccctttcgtgtttccaagtacattaattattt 13321269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 13901646 - 13901733
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||         |||||||||||| ||| | |||||||||||||||| || |||||||||||    
T  13901646 cctccgtccctaattataagacccttttgagaattttg---tgtctctttttacaagacccctttggtatttccaattatattaattattt 13901733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 33487838 - 33487925
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||| ||||||||        ||||||||||||||||| | |||||| ||||| ||| ||||||||||||||    
T  33487838 cctccgtccctaattataagacctttttgaga---attttttgtctctttttataagacccctttgttattttcaactacattaattattt 33487925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 8217705 - 8217662
Alignment:
Q  88 tttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||| ||| |||||||||| ||||||||||||||||||    
T  8217705 tttttataagactcttttggtattttcaagtacattaattattt 8217662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 133
Target Start/End: Complemental strand, 23282837 - 23282747
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||| ||| ||||||||||||||||||        ||||||||| ||||||| | |||||| ||||||||||| ||||||||| ||||    
T  23282837 cctccgtccctaaatataagacccttttgaga--atttttttgtctcttattataagacccctttgttatttccaagtgcattaattaatttt 23282747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 131
Target Start/End: Original strand, 27310485 - 27310528
Alignment:
Q  88 tttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||  ||||||||||||||||| ||||||||||||||    
T  27310485 tttttataagattcctttggtatttccaaatacattaattattt 27310528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 88 - 131
Target Start/End: Complemental strand, 29293785 - 29293742
Alignment:
Q  88 tttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    |||||||||| | | |||||||||||||||||||||||||||||    
T  29293785 tttttataagacccttttggtatttccaagtacattaattattt 29293742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 133
Target Start/End: Original strand, 31091450 - 31091541
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||||||| |||||||||||||||||||| |        ||||| ||||||||||| | | |||| ||||||||| ||||||||||||||||    
T  31091450 cctccgtccctaattataagacccttttgaaa-aaaaaaattgtccctttttataagacccatttgctatttccaactacattaattattttt 31091541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 20450174 - 20450124
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  20450174 ttgtccctttttataagacccctttgttatttccaactacattaattattt 20450124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 22710310 - 22710360
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | | |||||||||| ||||||||||||||||||    
T  22710310 ttgtccctttttataagacccttttggtattttcaagtacattaattattt 22710360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 28980849 - 28980799
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||||| |||||||||| |||||||||||    
T  28980849 ttgtccctttttataagacccctttggtgtttccaagtaaattaattattt 28980799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 29036169 - 29036219
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| || ||||| ||||||||| ||||||||||||||    
T  29036169 ttgtccctttttataagacttctttgttatttccaactacattaattattt 29036219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 31150239 - 31150189
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  31150239 ttgtccctttttataagacccctttgctatttccaactacattaattattt 31150189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 34126185 - 34126235
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| ||| |||| ||||||||| ||||||||||||||    
T  34126185 ttgtccctttttataaggctcatttgctatttccaactacattaattattt 34126235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 84 - 133
Target Start/End: Complemental strand, 8646195 - 8646146
Alignment:
Q  84 tctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    |||| ||||||||| ||| |||| ||||||||||||||||||||| ||||    
T  8646195 tctccttttataagactcatttgctatttccaagtacattaattaatttt 8646146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Complemental strand, 23398171 - 23398082
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| |||||||||||||||||||||         || || ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  23398171 cctccgtccctaattataagacccttttgagg-attttttttatccctttttataagacccctttgttatttccaactacattaattattt 23398082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 102 - 131
Target Start/End: Original strand, 27581451 - 27581480
Alignment:
Q  102 ctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||||||||||    
T  27581451 ctttggtatttccaagtacattaattattt 27581480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 32614994 - 32615082
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||| ||||||||||        || || ||||||||||||| | |||| ||||||||| ||||||||||||||    
T  32614994 cctccgtccctaattataagaaccttttgaga--atttttttatccctttttataagtcccgtttgttatttccaattacattaattattt 32615082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 344914 - 344958
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  344914 ctttttataagacccctttgttatttccaactacattaattattt 344958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 4175286 - 4175338
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| |  ||||| ||||||||| ||||||||||||||||    
T  4175286 ttgtccctttttataagacctctttgatatttccaaatacattaattattttt 4175338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Original strand, 6417925 - 6417969
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  6417925 ctttttataagacccctttgttatttccaactacattaattattt 6417969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Original strand, 10750990 - 10751026
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  10750990 aagcatagatcatctcttctttggtacctaaaatgtt 10751026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 81 - 133
Target Start/End: Original strand, 13445999 - 13446051
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| ||  |||| ||||||||| ||||||||||||||||    
T  13445999 ttgtccctttttataagactattttgatatttccaattacattaattattttt 13446051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 342
Target Start/End: Complemental strand, 34637032 - 34636996
Alignment:
Q  306 aagcatacatcatatcttctttggtacctaaaatgtt 342  Q
    ||||||| ||||| |||||||||||||||||||||||    
T  34637032 aagcatagatcatctcttctttggtacctaaaatgtt 34636996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 47645 - 47734
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  47645 cctccgtccctaattataagacccttttgaga-attttttttgtccctttttataagactcctttgttatttccaactacattaattattt 47734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 3443 - 3531
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  3443 cctccgtccctaattataagacccttttgaga--atttttttgtccctttttataagacccctttgctatttccaactacattaattattt 3531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 41 - 131
Target Start/End: Original strand, 48659 - 48749
Alignment:
Q  41 cctccgtccttaattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||| ||||||||||||||||||||||        ||||  ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  48659 cctccgtccctaattataagacccttttgagaatttttttttgtacctttttataagacccctttgctatttccaactacattaattattt 48749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 81 - 133
Target Start/End: Complemental strand, 36356 - 36304
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattttt 133  Q
    ||||| ||||||||||| || ||||||| ||||||||||||||||||||||||    
T  36356 ttgtccctttttataagacttctttggtgtttccaagtacattaattattttt 36304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 5279 - 5229
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||||||| ||||||||||||||    
T  5279 ttgtccctttttataagactcctttgttatttccaactacattaattattt 5229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0308; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 41 - 72
Target Start/End: Complemental strand, 14380 - 14349
Alignment:
Q  41 cctccgtccttaattataagacccttttgaga 72  Q
    ||||||||||||||||||||||||||||||||    
T  14380 cctccgtccttaattataagacccttttgaga 14349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 11652 - 11602
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||| | ||||||||||||  |||||||||||||||||    
T  11652 ttgtctctttttataagacccctttggtatttttaagtacattaattattt 11602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0236 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0236
Description:

Target: scaffold0236; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 17508 - 17558
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | | |||||||||||||||||||||||||||||    
T  17508 ttgtccctttttataagacccttttggtatttccaagtacattaattattt 17558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 246500 - 246550
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||||| ||||||||||||||||||||||    
T  246500 ttgtccctttttataagacccctttggtgtttccaagtacattaattattt 246550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 51 - 131
Target Start/End: Complemental strand, 31709 - 31630
Alignment:
Q  51 taattataagacccttttgagatnnnnnnnttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||||||||||||||        ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  31709 taattataagacccttttgaga-attttttttgtccctttttataagacccctttgttatttccaactacattaattattt 31630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2116 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold2116
Description:

Target: scaffold2116; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 54 - 4
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  54 ttgtccctttttataagacccctttgttatttccaactacattaattattt 4  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0649 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0649
Description:

Target: scaffold0649; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 4291 - 4241
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  4291 ttgtccctttttataagacccctttgttatttccaactacattaattattt 4241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0443 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Original strand, 4724 - 4774
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  4724 ttgtccctttttataagacccctttgctatttccaactacattaattattt 4774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 6603 - 6553
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  6603 ttgtccctttttataagacccctttgctatttccaactacattaattattt 6553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 81 - 131
Target Start/End: Complemental strand, 24623 - 24573
Alignment:
Q  81 ttgtctctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||| ||||||||||| |||||||| ||||| ||| ||||||||||||||    
T  24623 ttgtcgctttttataagactcctttgttattttcaactacattaattattt 24573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 72
Target Start/End: Original strand, 24224 - 24253
Alignment:
Q  43 tccgtccttaattataagacccttttgaga 72  Q
    ||||||||||||||||||||||||||||||    
T  24224 tccgtccttaattataagacccttttgaga 24253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0907 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0907
Description:

Target: scaffold0907; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 4562 - 4518
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| | |||||| ||||||||| ||||||||||||||    
T  4562 ctttttataagacccctttgctatttccaattacattaattattt 4518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 87 - 131
Target Start/End: Complemental strand, 9653 - 9609
Alignment:
Q  87 ctttttataagtctcctttggtatttccaagtacattaattattt 131  Q
    ||||||||||| || ||||| ||||||||| ||||||||||||||    
T  9653 ctttttataagacttctttgctatttccaactacattaattattt 9609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University