View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF7729_high_9 (Length: 252)
Name: NF7729_high_9
Description: NF7729
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF7729_high_9 |
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Alignment Details
Target: chr8 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 234
Target Start/End: Original strand, 38116912 - 38117145
Alignment:
| Q |
1 |
aagttgtcaaaatgaaaagatgaatgaattcatgcatgtttagaatcagtgtgagtttggcgaaattatggccgcacaatgattttattgaagcttttaa |
100 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |
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| T |
38116912 |
aagttgtcaaaatgaaaagatgaatgaattcatgcatgtttagaatcagtgtgagtttggcgaaattatggccgcaccatgattttattgaagcttttaa |
38117011 |
T |
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| Q |
101 |
gtgtagttttcgtcaaaatcttagtggcacaccatgattttgccaaactcaccgttgatctaacaactaacatgatctattcattgatccgttgttcttc |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
38117012 |
gtgtagttttcgtcaaaatcttagtggcacaccatgattttgccaaactcaccgttgatctaacaatgaacatgatctattcattgatccgttgttcttc |
38117111 |
T |
|
| Q |
201 |
aatttcaacactaacaaattatatttatataatc |
234 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
38117112 |
aatttcaacactaacaaattatatttatataatc |
38117145 |
T |
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